Pregenerated sensors for PTPN11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043733Ensembl transcript IDs: ENSMUST00000054547.9, ENSMUST00000100770.9
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCCAGGGCCCTGGGAGCCCTGTGCAGAGCAGCAAGATGAACAGTaGGTTACAGACGGCTGGCTTTTGGGGAGGCTGTGCCGGAATCTC | + |
|
Preference number: 1 (lower is better) Translates to: QPGPWEPCAEQQDEQ*VTDGWLLGRLCRNL Trigger: GAGATTCCGGCACAGCCTCCCCAAAAGCCAGCCGTCTGTAACCCACTGTTCATCTTGCTGCTCTGCACAGGGCTCCCAGGGCCCTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 90 bp | ACATGCAGCCTGCTCGATGCTGGCCCTGTGCCTCTGACCTGCTCATaGGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACAC | + |
|
Preference number: 1 (lower is better) Translates to: TCSLLDAGPVPLTCS*ATCATSTLAVSNPH Trigger: GTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGCAGGTCAGAGGCACAGGGCCAGCATCGAGCAGGCTGCATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 90 bp | GCCTCTGTGATGATGATGACCCTAAGCAGTCTCCAGCCAGGGCCCTaGGAGCCCTGTGCAGAGCAGCAAGATGAACAGTGGGTTACAGAC | + |
|
Preference number: 1 (lower is better) Translates to: ASVMMMTLSSLQPGP*EPCAEQQDEQWVTD Trigger: GTCTGTAACCCACTGTTCATCTTGCTGCTCTGCACAGGGCTCCCAGGGCCCTGGCTGGAGACTGCTTAGGGTCATCATCATCACAGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 90 bp | CAGCCAGGTTCTACAGCACCAACAGGAACTGCTCTCTGCTTCCTGTaGCCTCAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGA | + |
|
Preference number: 1 (lower is better) Translates to: QPGSTAPTGTALCFL*PQHPTRATAASDWG Trigger: TCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTGAGGGCACAGGAAGCAGAGAGCAGTTCCTGTTGGTGCTGTAGAACCTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 90 bp | CGTCTGAAACTAGGACAATGTAGAACGAGCCCACACTTCTGCCTGTaGTTCCTTCCCGAGCGCATCTGCCCCAGTCCTGTCCCAGAAACA | + |
|
Preference number: 1 (lower is better) Translates to: RLKLGQCRTSPHFCL*FLPERICPSPVPET Trigger: TGTTTCTGGGACAGGACTGGGGCAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTCGTTCTACATTGTCCTAGTTTCAGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 90 bp | GTCTGCAGGGAGCACAAAGACCTCCCAATGTCACTGTGTGGACAGTaGGATGATAAGGGATACCTGGGTCTTGAGGGTGCAGTGAACTTG | + |
|
Preference number: 1 (lower is better) Translates to: VCREHKDLPMSLCGQ*DDKGYLGLEGAVNL Trigger: CAAGTTCACTGCACCCTCAAGACCCAGGTATCCCTTATCATCTCACTGTCCACACAGTGACATTGGGAGGTCTTTGTGCTCCCTGCAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 90 bp | GTGGACAGTGAGATGATAAGGGATACCTGGGTCTTGAGGGTGCAGTaGACTTGTGCCATAAAAGTGATTCCCCACTTGGTGCTCTCCCGT | + |
|
Preference number: 1 (lower is better) Translates to: VDSEMIRDTWVLRVQ*TCAIKVIPHLVLSR Trigger: ACGGGAGAGCACCAAGTGGGGAATCACTTTTATGGCACAAGTTCACTGCACCCTCAAGACCCAGGTATCCCTTATCATCTCACTGTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 90 bp | CATTCCCACCAGGCCATGCTGTGCTCTGAAGCAATCGAATTCAGTTaGAGAAGGGGCCAGGATCGATGCACATGCTCTAAGAAAATGGTG | + |
|
Preference number: 1 (lower is better) Translates to: HSHQAMLCSEAIEFS*RRGQDRCTCSKKMV Trigger: CACCATTTTCTTAGAGCATGTGCATCGATCCTGGCCCCTTCTCCAACTGAATTCGATTGCTTCAGAGCACAGCATGGCCTGGTGGGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 90 bp | AGACAACATGGTCACTTTGCCCAGAACAGCTTCTCTGTCCACACCTaGAGCCAAGGAGTCATCTTCAGAAGAAAGACTTCACACACCAGT | + |
|
Preference number: 1 (lower is better) Translates to: RQHGHFAQNSFSVHT*SQGVIFRRKTSHTS Trigger: ACTGGTGTGTGAAGTCTTTCTTCTGAAGATGACTCCTTGGCTGCAGGTGTGGACAGAGAAGCTGTTCTGGGCAAAGTGACCATGTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 90 bp | CAGGTCCAATTCTTCCTTTCAGGAATGGAAGCAAGAAGAATCAAGTaGAGACTGTGCGGTTGCTTGGTCACGAGCATCACATCTGGAAGC | + |
|
Preference number: 1 (lower is better) Translates to: QVQFFLSGMEARRIK*RLCGCLVTSITSGS Trigger: GCTTCCAGATGTGATGCTCGTGACCAAGCAACCGCACAGTCTCCACTTGATTCTTCTTGCTTCCATTCCTGAAAGGAAGAATTGGACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 90 bp | AAAGTGAACTGTCCTTGGCTGGGTCAATCTGTTTTAAAAGTGCCCTaGCATGTGTCTGCAGGGAGCACAAAGACCTCCCAATGTCACTGT | + |
|
Preference number: 1 (lower is better) Translates to: KVNCPWLGQSVLKVP*HVSAGSTKTSQCHC Trigger: ACAGTGACATTGGGAGGTCTTTGTGCTCCCTGCAGACACATGTCAGGGCACTTTTAAAACAGATTGACCCAGCCAAGGACAGTTCACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 90 bp | AGGTCTCTGTTCCAGGATCTCAAGCTGCAAGTAGAAATGTTAGCTTaGGAGATCAGCAGCTCAGCTAACCTCTGTGTGCTGGTGAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: RSLFQDLKLQVEMLA*EISSSANLCVLVRN Trigger: GTTTCTCACCAGCACACAGAGGTTAGCTGAGCTGCTGATCTCTCAAGCTAACATTTCTACTTGCAGCTTGAGATCCTGGAACAGAGACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 90 bp | CAATGTGCTATAGAGAGTAGGATCTGGGATCCTGGCTGTGAATGCTaGACTGATCTCATTACAAACTCTCGGAGAAGACAGCAGTCTCCA | + |
|
Preference number: 1 (lower is better) Translates to: QCAIESRIWDPGCEC*TDLITNSRRRQQSP Trigger: TGGAGACTGCTGTCTTCTCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCCTACTCTCTATAGCACATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 90 bp | TATGAAAATAGCATTGTCAAGAACGCAGAGCAGTCTCTCCTTAGCTaGGGAAAGGAGGTGCCAATTAGGCACGTGCTGTTCAAATGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: YENSIVKNAEQSLLS*GKEVPIRHVLFKWF Trigger: GAACCATTTGAACAGCACGTGCCTAATTGGCACCTCCTTTCCTCAGCTAAGGAGAGACTGCTCTGCGTTCTTGACAATGCTATTTTCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 90 bp | TCTATCAGTAAAATATTATATTTCTTTAATACTCTGCCTGATGGATaGTTCATACGCTGTGGGAAAGCTAAGTGTGAGTCTGGCCATCGG | + |
|
Preference number: 1 (lower is better) Translates to: SISKILYFFNTLPDG*FIRCGKAKCESGHR Trigger: CCGATGGCCAGACTCACACTTAGCTTTCCCACAGCGTATGAAGCATCCATCAGGCAGAGTATTAAAGAAATATAATATTTTACTGATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | CACCAGGTCCTCAGGTGGGCGCTGCAGCACACGTGCGGGGCTCGGAAGCTTCTACGGGCTGGGGCTGTCTaGCTGGTGGCCCCAGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: HQVLRWALQHTCGARKLLRAGAV*LVAPEH Trigger: ATGCTCTGGGGCCACCAGTCAGACAGCCCCAGCCCG...TAGAAGCTTCCGAGCCCCGCACGTGTGCTGCAGCGCCCACCTGAGGACCTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCATCGCCTTCCCACCCCAGCTCCAGCCAGGGCCCTaGGAGCCCTGTGCAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPLFILSQGPGSIAFPPQLQPGP*EPCAEQ Trigger: CTGCTCTGCACAGGGCTCCCAGGGCCCTGGCTGGAG...CTGGGGTGGGAAGGCGATGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | CCAGGACTGCCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCATCGCCTTCCCACGGGCTGGGGCTGTCTaGCTGGTGGCCCCAGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: PGLPLFILSQGPGSIAFPRAGAV*LVAPEH Trigger: ATGCTCTGGGGCCACCAGTCAGACAGCCCCAGCCCG...TGGGAAGGCGATGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAGTCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | CACCAGGTCCTCAGGTGGGCGCTGCAGCACACGTGCGGGGCTCGGAAGCTTCTAAAGGCCCTCACCAGGTaGAAGCCTGCAGCCTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: HQVLRWALQHTCGARKLLKALTR*KPAAWP Trigger: AGGCCAGGCTGCAGGCTTGCACCTGGTGAGGGCCTT...TAGAAGCTTCCGAGCCCCGCACGTGTGCTGCAGCGCCCACCTGAGGACCTGGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGGTCCTCAGGTGGGCGCTGCAGCACACGTGCGGGGCTCGGAAGCTTCTATGCAAGCCTGCAGCCTaGCCTACTGGTCCCTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HQVLRWALQHTCGARKLLCKPAA*PTGPWN Trigger: GTTCCAGGGACCAGTAGGCCAGGCTGCAGGCTTGCA...TAGAAGCTTCCGAGCCCCGCACGTGTGCTGCAGCGCCCACCTGAGGACCTGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGCCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCATCGCCTTCCCACCCCAGCAGACGGCTGGCTTTTaGGGAGGCTGTGCCGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: LPLFILSQGPGSIAFPPQQTAGF*GGCAGI Trigger: GATTCCGGCACAGCCTCCCCAAAAGCCAGCCGTCTG...CTGGGGTGGGAAGGCGATGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CACCAGGTCCTCAGGTGGGCGCTGCAGCACACGTGCGGGGCTCGGAAGCTTCTATGGGTTACAGACGGCTaGCTTTTGGGGAGGCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HQVLRWALQHTCGARKLLWVTDG*LLGRLC Trigger: GCACAGCCTCCCCAAAAGCCAGCCGTCTGTAACCCA...TAGAAGCTTCCGAGCCCCGCACGTGTGCTGCAGCGCCCACCTGAGGACCTGGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | CCAGGACTGCCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCATCGCCTTCCCAGACAGTGGGGGCTCATaGAACCCAGATCAGATGTGC | + |
|
Preference number: 2 (lower is better) Translates to: PGLPLFILSQGPGSIAFPDSGGS*NPDQMC Trigger: GCACATCTGATCTGGGTTGCATGAGCCCCCACTGTC...TGGGAAGGCGATGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAGTCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | CAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTACGCGCTGCAGCACACGTaGGGGGCTCGGAAGCTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: QHPTRATAASDWGCSELYALQHT*GARKLL Trigger: TAGAAGCTTCCGAGCCCCGCACGTGTGCTGCAGCGC...GTAGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTCTCCACATTCCCACCAGGCCATGCTGTGCTCTGAAGCAATCGAATTCACTCCAGCCAGGGCCCTaGGAGCCCTGTGCAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: SSLHIPTRPCCALKQSNSLQPGP*EPCAEQ Trigger: CTGCTCTGCACAGGGCTCCCAGGGCCCTGGCTGGAG...TGAATTCGATTGCTTCAGAGCACAGCATGGCCTGGTGGGAATGTGGAGACTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CAA 90 bp | CAGGGAAACACCTCCCTGAAGCAGACACCCAGGGTTCTGACCATGTaGCCAACCTCCCAAGTGACCCTTACAGGACAGTGGGGGCTCATG | + |
|
Preference number: 2 (lower is better) Translates to: QGNTSLKQTPRVLTM*PTSQVTLTGQWGLM Trigger: CATGAGCCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCTGCTTCAGGGAGGTGTTTCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCCACACTTCTGCCTGTGCTTCCTTCCCGAGCGCATCTGCCCCAGTCCTGTGGCCATGCTGTGCTCTaGAGCAATCGAATTCAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: EPTLLPVLPSRAHLPQSCGHAVL*SNRIQL Trigger: CAACTGAATTCGATTGCTTCAGAGCACAGCATGGCC...ACAGGACTGGGGCAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTCGCACAGCACACAGCTaGGACCCTGCAACCACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LNTPQEQQLLVTGDAVSSRTAHS*DPATTF Trigger: GAAGGTGGTTGCAGGGTCTCAGCTGTGTGCTGTGCG...AGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGCGGTGCTTCAGGGATGGGCTCCCACGTACACACCACCAACCCGACCACACCGACCCTCTCATTCAGTaGCTGAATGACCGTTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: QRCFRDGLPRTHHQPDHTDPLIQ*LNDRFT Trigger: AGTGAAACGGTCATTCAGCCACTGAATGAGAGGGTC...GGTGTGGTCGGGTTGGTGGTGTGTACGTGGGAGCCCATCCCTGAAGCACCGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGCTCTTGCTAACTACAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGACCCTTACAGGACAGTaGGGGCTCATGCAACCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GLLLTTATCFYATGWGCLTLTGQ*GLMQPR Trigger: TCTGGGTTGCATGAGCCCCCACTGTCCTGTAAGGGT...CAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGCCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCATCGCCTTCCCACCCCAGGGTGCAGTGAACTTGTaGCATAAAAGTGATTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LPLFILSQGPGSIAFPPQGAVNL*HKSDSP Trigger: TGGGGAATCACTTTTATGGCACAAGTTCACTGCACC...CTGGGGTGGGAAGGCGATGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATGAGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCAAATGGTGGCCCCTGTaGTCCCCAACTACCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: AHEPPVQLPLSLSQIHTSKWWPL*SPTTSG Trigger: GCCTGAGGTAGTTGGGGAGCACAGGGGCCACCATTT...GGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCCACACTTCTGCCTGTGCTTCCTTCCCGAGCGCATCTGCCCCAGTCCTGTGCAAGAAGAATCAAGTaGAGACTGTGCGGTTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: EPTLLPVLPSRAHLPQSCARRIK*RLCGCL Trigger: CAAGCAACCGCACAGTCTCCACTTGATTCTTCTTGC...ACAGGACTGGGGCAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCCTCCAGGCCTGCGCCTaGAGAAGACCTGGCCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: CATSTLAVSNPHLPYLIFLQACA*RRPGHF Trigger: GAAGTGGCCAGGTCTTCTTCAGGCGCAGGCCTGGAG...GAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CCTGATTCTCTCACAGCAGCCACGGAAGAAGTCATCATGGTCACTCCAGGCCTGACCCTTACAGGACAGTaGGGGCTCATGCAACCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PDSLTAATEEVIMVTPGLTLTGQ*GLMQPR Trigger: TCTGGGTTGCATGAGCCCCCACTGTCCTGTAAGGGT...CAGGCCTGGAGTGACCATGATGACTTCTTCCGTGGCTGCTGTGAGAGAATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | TGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCCCTTCTATGCCACGGGCTaGGGCTGTCTGACTGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: CNFHSRCLKSTPPIPHLPFYATG*GCLTGG Trigger: GCCACCAGTCAGACAGCCCCAGCCCGTGGCATAGAA...GGGAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGCTCTTGCTAACTACAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGTCACTGTGTGGACAGTaGGATGATAAGGGATACCTG | + |
|
Preference number: 2 (lower is better) Translates to: GLLLTTATCFYATGWGCLSLCGQ*DDKGYL Trigger: CAGGTATCCCTTATCATCTCACTGTCCACACAGTGA...CAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | AGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACAGGACAGTGGGGGGTTTTAAAAGTGCCCTaGCATGTGTCTGCAGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RVLTMLPTSQVTLTGQWGVLKVP*HVSAGS Trigger: GCTCCCTGCAGACACATGTCAGGGCACTTTTAAAAC...CCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | GGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCTCGGACTCCAGGCCTGCGCCTaGAGAAGACCTGGCCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: GSGILAVNAELISLQTLGLQACA*RRPGHF Trigger: GAAGTGGCCAGGTCTTCTTCAGGCGCAGGCCTGGAG...TCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTACCTCTGTGTGCTGGTaGGAAACTTTGCCCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: LNTPQEQQLLVTGDAVSSTSVCW*ETLPSK Trigger: CTTGGAGGGCAAAGTTTCTCACCAGCACACAGAGGT...AGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATGAGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCGCTGAGGAAAGGAGGTaGCAATTAGGCACGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AHEPPVQLPLSLSQIHTSAEERR*QLGTCC Trigger: ACAGCACGTGCCTAATTGGCACCTCCTTTCCTCAGC...GGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GAAGCAGACACCCAGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACCTTTTGGGGAGGCTGTaGCGGAATCTCCCTAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: EADTQGSDHVANLPSDPYLLGRL*RNLPKS Trigger: GGATTTAGGGAGATTCCGGCACAGCCTCCCCAAAAG...GTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCTGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTATCAAGTGGAGACTGTaGGGTTGCTTGGTCACGAGC | + |
|
Preference number: 2 (lower is better) Translates to: LNTPQEQQLLVTGDAVSSIKWRL*GCLVTS Trigger: GCTCGTGACCAAGCAACCGCACAGTCTCCACTTGAT...AGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTAGGAAGAGGAGTTGTGAAAACTACTTGGATGCACAGCCAGGTTCTACAGCCAACTACCTCAGGCTaGCAGGGAGCAGGAGGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: GLGRGVVKTTWMHSQVLQPTTSG*QGAGGP Trigger: GGGGCCTCCTGCTCCCTGGCAGCCTGAGGTAGTTGG...CTGTAGAACCTGGCTGTGCATCCAAGTAGTTTTCACAACTCCTCTTCCTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTACAGAACGGGAATGGGGTaGTCAGGAACAAGTGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: QHPTRATAASDWGCSELYRTGMG*SGTSED Trigger: GTCCTCACTTGTTCCTGACCACCCCATTCCCGTTCT...GTAGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTAGGAAGAGGAGTTGTGAAAACTACTTGGATGCACAGCCAGGTTCTACAGCACCAGGTCCTCAGGTaGGCGCTGCAGCACACGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GLGRGVVKTTWMHSQVLQHQVLR*ALQHTC Trigger: GCACGTGTGCTGCAGCGCCCACCTGAGGACCTGGTG...CTGTAGAACCTGGCTGTGCATCCAAGTAGTTTTCACAACTCCTCTTCCTAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | CCTGATTCTCTCACAGCAGCCACGGAAGAAGTCATCATGGTCACTCCAGGCCTGGTTTTAAAAGTGCCCTaGCATGTGTCTGCAGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: PDSLTAATEEVIMVTPGLVLKVP*HVSAGS Trigger: GCTCCCTGCAGACACATGTCAGGGCACTTTTAAAAC...CAGGCCTGGAGTGACCATGATGACTTCTTCCGTGGCTGCTGTGAGAGAATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTTTAGGAAGAGGAGTTGTGAAAACTACTTGGATGCACAGCCAGGTTCTACAGCTGGCCCTGTGCCTCTaGCCTGCTCATGAGCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: GLGRGVVKTTWMHSQVLQLALCL*PAHEPP Trigger: AGGTGGCTCATGAGCAGGTCAGAGGCACAGGGCCAG...CTGTAGAACCTGGCTGTGCATCCAAGTAGTTTTCACAACTCCTCTTCCTAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTCATCATGGTCACTCCAGGCCTGCGCCTGAAGAAGACCTGGCCACTTCTGGCGGTGCAGTGAACTTGTaGCATAAAAGTGATTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: SHHGHSRPAPEEDLATSGGAVNL*HKSDSP Trigger: TGGGGAATCACTTTTATGGCACAAGTTCACTGCACC...GCCAGAAGTGGCCAGGTCTTCTTCAGGCGCAGGCCTGGAGTGACCATGATGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GTATATGCAGATACACTCATGGCACAGCTGGGGAAACTTGAGGTTTCTCTACACCCATGTGCTAGACAATaGCCCACCCCACCCCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: VYADTLMAQLGKLEVSLHPCARQ*PTPPPP Trigger: GGGAGGGGGTGGGGTGGGGCATTGTCTAGCACATGG...GTGTAGAGAAACCTCAAGTTTCCCCAGCTGTGCCATGAGTGTATCTGCATATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCTCGGATGCAAGCCTGCAGCCTaGCCTACTGGTCCCTGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GSGILAVNAELISLQTLGCKPAA*PTGPWN Trigger: GTTCCAGGGACCAGTAGGCCAGGCTGCAGGCTTGCA...TCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTAGGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCACCAGGTCCTCAGGTaGGCGCTGCAGCACACGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RVGSGILAVNAELISLQTHQVLR*ALQHTC Trigger: GCACGTGTGCTGCAGCGCCCACCTGAGGACCTGGTG...AGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCCTACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTCATGAGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCTTCCTGTTGCCCTATTaGAATGACAGCTGGCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: AHEPPVQLPLSLSQIHTSFLLPY*NDSWLA Trigger: AGCCAGCCAGCTGTCATTCCAATAGGGCAACAGGAA...GGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | CTCAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTTCACTGTGTGGACAGTaGGATGATAAGGGATACCTG | + |
|
Preference number: 2 (lower is better) Translates to: LNTPQEQQLLVTGDAVSSSLCGQ*DDKGYL Trigger: CAGGTATCCCTTATCATCTCACTGTCCACACAGTGA...AGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | GGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCTCGGAAGACACCCAGGGTTCTaGCCATGTTGCCAACCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GSGILAVNAELISLQTLGRHPGF*PCCQPP Trigger: GGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCT...TCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCCCGCTGAGGAAAGGAGGTaGCAATTAGGCACGTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: CNFHSRCLKSTPPIPHLPAEERR*QLGTCC Trigger: ACAGCACGTGCCTAATTGGCACCTCCTTTCCTCAGC...GGGAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCTCGGAAAATGGTGGCCCCTGTaGTCCCCAACTACCTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: GSGILAVNAELISLQTLGKWWPL*SPTTSG Trigger: GCCTGAGGTAGTTGGGGAGCACAGGGGCCACCATTT...TCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | CTCAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTCAGGATCGATGCACATaGTCTAAGAAAATGGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LNTPQEQQLLVTGDAVSSQDRCT*SKKMVA Trigger: GGCCACCATTTTCTTAGAGCATGTGCATCGATCCTG...AGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCAGACACCCAGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACGACCCTCTCATTCAGTaGCTGAATGACCGTTTCACT | + |
|
Preference number: 2 (lower is better) Translates to: EADTQGSDHVANLPSDPYDPLIQ*LNDRFT Trigger: AGTGAAACGGTCATTCAGCCACTGAATGAGAGGGTC...GTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCTGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTTTAGGAAGAGGAGTTGTGAAAACTACTTGGATGCACAGCCAGGTTCTACAGTTCTATGCCACGGGCTaGGGCTGTCTGACTGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: GLGRGVVKTTWMHSQVLQFYATG*GCLTGG Trigger: GCCACCAGTCAGACAGCCCCAGCCCGTGGCATAGAA...CTGTAGAACCTGGCTGTGCATCCAAGTAGTTTTCACAACTCCTCTTCCTAAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CAA 90 bp | CCCGGGATCTTACTAATACTCCAGTACAGAGACAACATGGTCACTTaGCCCAGAACAGCTTCTCTGTCCACACCTGCAGCCAAGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: PGILLILQYRDNMVT*PRTASLSTPAAKES Trigger: TGACTCCTTGGCTGCAGGTGTGGACAGAGAAGCTGTTCTGGGCAAAGTGACCATGTTGTCTCTGTACTGGAGTATTAGTAAGATCCCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTCATGAGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCGTAGAAATGTTAGCTTaGGAGATCAGCAGCTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: AHEPPVQLPLSLSQIHTSVEMLA*EISSSA Trigger: AGCTGAGCTGCTGATCTCTCAAGCTAACATTTCTAC...GGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCCCCACCAGGCCATGCTGTaGTCTGAAGCAATCGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: CNFHSRCLKSTPPIPHLPHQAML*SEAIEF Trigger: GAATTCGATTGCTTCAGAGCACAGCATGGCCTGGTG...GGGAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTCATGAGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCACGTGCTGTTCAAATaGTTCCAAACTTCGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: AHEPPVQLPLSLSQIHTSHVLFK*FQTSLL Trigger: GAGAAGCGAAGTTTGGAACCATTTGAACAGCACGTG...GGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTAGGAAGAGGAGTTGTGAAAACTACTTGGATGCACAGCCAGGTTCTACAGGACAGTGGGGGCTCATaGAACCCAGATCAGATGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GLGRGVVKTTWMHSQVLQDSGGS*NPDQMC Trigger: GCACATCTGATCTGGGTTGCATGAGCCCCCACTGTC...CTGTAGAACCTGGCTGTGCATCCAAGTAGTTTTCACAACTCCTCTTCCTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGGCTGAATGACCGTTTCACTAAACAAAAGAAGCCACCAAAAGTGAACTGTCAGACGGCTGGCTTTTaGGGAGGCTGTGCCGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: QWLNDRFTKQKKPPKVNCQTAGF*GGCAGI Trigger: GATTCCGGCACAGCCTCCCCAAAAGCCAGCCGTCTG...ACAGTTCACTTTTGGTGGCTTCTTTTGTTTAGTGAAACGGTCATTCAGCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | AGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACAGGACAGTGGGGGAGAGCACAATTTAGCTaGTTCCACAATTCAAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: RVLTMLPTSQVTLTGQWGRAQFS*FHNSKP Trigger: TGGTTTTGAATTGTGGAAGCAGCTAAATTGTGCTCT...CCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTAGGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTGCAGAGGGACATCTCTaGAGAAGGCACTTACGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RVGSGILAVNAELISLQTAEGHL*RRHLRQ Trigger: CTGCCGTAAGTGCCTTCTCCAGAGATGTCCCTCTGC...AGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCCTACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTTTAGGAAGAGGAGTTGTGAAAACTACTTGGATGCACAGCCAGGTTCTACAGCCAGATCAGATGTGCTaGACTGAAGAACGGGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: GLGRGVVKTTWMHSQVLQPDQMC*TEEREW Trigger: CCATTCCCGTTCTTCAGTGCAGCACATCTGATCTGG...CTGTAGAACCTGGCTGTGCATCCAAGTAGTTTTCACAACTCCTCTTCCTAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GTATATGCAGATACACTCATGGCACAGCTGGGGAAACTTGAGGTTTCTCTACACCACCAGGCCATGCTGTaGTCTGAAGCAATCGAATTC | + |
|
Preference number: 2 (lower is better) Translates to: VYADTLMAQLGKLEVSLHHQAML*SEAIEF Trigger: GAATTCGATTGCTTCAGAGCACAGCATGGCCTGGTG...GTGTAGAGAAACCTCAAGTTTCCCCAGCTGTGCCATGAGTGTATCTGCATATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCAGTACAGAGACAACATaGTCACTTTGCCCAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: CATSTLAVSNPHLPYLIFSTETT*SLCPEQ Trigger: CTGTTCTGGGCAAAGTGACCATGTTGTCTCTGTACT...GAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAGTAGGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCTCAAGGATCAACACTaGGCAGAGGGACATCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RVGSGILAVNAELISLQTLKDQH*AEGHLW Trigger: CCAGAGATGTCCCTCTGCCCAGTGTTGATCCTTGAG...AGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCCTACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCTCGGAAGTACAGAGACAACATaGTCACTTTGCCCAGAACAG | + |
|
Preference number: 2 (lower is better) Translates to: GSGILAVNAELISLQTLGSTETT*SLCPEQ Trigger: CTGTTCTGGGCAAAGTGACCATGTTGTCTCTGTACT...TCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCCCAGAGCACAATTTAGCTaGTTCCACAATTCAAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: CNFHSRCLKSTPPIPHLPRAQFS*FHNSKP Trigger: TGGTTTTGAATTGTGGAAGCAGCTAAATTGTGCTCT...GGGAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCAAAGTGAACTGTCCTTaGCTGGGTCAATCTGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: CATSTLAVSNPHLPYLIFKVNCP*LGQSVL Trigger: TAAAACAGATTGACCCAGCCAAGGACAGTTCACTTT...GAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGAATGACCGTTTCACTAAACAAAAGAAGCCACCAAAAGTGAACTGTCCTTGGCACGTGCTGTTCAAATaGTTCCAAACTTCGCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: LNDRFTKQKKPPKVNCPWHVLFK*FQTSLL Trigger: GAGAAGCGAAGTTTGGAACCATTTGAACAGCACGTG...CCAAGGACAGTTCACTTTTGGTGGCTTCTTTTGTTTAGTGAAACGGTCATTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CCA 90 bp | GTATATGCAGATACACTCATGGCACAGCTGGGGAAACTTGAGGTTTCTCTACACAAAGTGAACTGTCCTTaGCTGGGTCAATCTGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: VYADTLMAQLGKLEVSLHKVNCP*LGQSVL Trigger: TAAAACAGATTGACCCAGCCAAGGACAGTTCACTTT...GTGTAGAGAAACCTCAAGTTTCCCCAGCTGTGCCATGAGTGTATCTGCATATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR GCA 90 bp | GTATATGCAGATACACTCATGGCACAGCTGGGGAAACTTGAGGTTTCTCTACACATTTCTTTAATACTCTaGCTGATGGATGCTTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: VYADTLMAQLGKLEVSLHISLIL*LMDASY Trigger: GTATGAAGCATCCATCAGGCAGAGTATTAAAGAAAT...GTGTAGAGAAACCTCAAGTTTCCCCAGCTGTGCCATGAGTGTATCTGCATATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | GTGAGGGGAGACTCGGGTCACATGCAGCCTGCTCGATaGTGGCCCTGTGCCTCTGACCTGCTCATGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VRGDSGHMQPAR*WPCASDLLMSH Trigger: GTGGCTCATGAGCAGGTCAGAGGCACAGGGCCAGCATCGAGCAGGCTGCATGTGACCCGAGTCTCCCCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | AGGGGAGACTCGGGTCACATGCAGCCTGCTCGATGCTaGCCCTGTGCCTCTGACCTGCTCATGAGCCACCTG | + |
|
Preference number: 3 (lower is better) Translates to: RGDSGHMQPARC*PCASDLLMSHL Trigger: CAGGTGGCTCATGAGCAGGTCAGAGGCACAGGGCCAGCATCGAGCAGGCTGCATGTGACCCGAGTCTCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | GCCAGGGCCCTGGGAGCCCTGTGCAGAGCAGCAAGATaGACAGTGGGTTACAGACGGCTGGCTTTTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ARALGALCRAAR*TVGYRRLAFGE Trigger: CTCCCCAAAAGCCAGCCGTCTGTAACCCACTGTTCATCTTGCTGCTCTGCACAGGGCTCCCAGGGCCCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | GCCTGGGCTCTTGCTAACTACAGCCACTTGCTTCTATaGCACGGGCTGGGGCTGTCTGACTGGTGGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: AWALANYSHLLL*HGLGLSDWWPQ Trigger: CTGGGGCCACCAGTCAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | CGGCTGACTGGAACTGATAGGAGGCCTAGCCAGGACTaGCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLTGTDRRPSQD*RSSYSAKAREA Trigger: TGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAGTCCTGGCTAGGCCTCCTATCAGTTCCAGTCAGCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | CACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGACTaGTGGCCCCAGAGCATAGGACTTCACACCTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLLLCHGLGLSD*WPQSIGLHTLG Trigger: GCCCAAGGTGTGAAGTCCTATGCTCTGGGGCCACCAGTCAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | CAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTaGCTGGTGGCCCCAGAGCATAGGACTTCACACCTT | + |
|
Preference number: 3 (lower is better) Translates to: QPLASMPRAGAV*LVAPEHRTSHL Trigger: AAGGTGTGAAGTCCTATGCTCTGGGGCCACCAGTCAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | CTGCTCGATGCTGGCCCTGTGCCTCTGACCTGCTCATaGGCCACCTGTGCAACTTCCACTCTCGCTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LLDAGPVPLTCS*ATCATSTLAVS Trigger: TGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGCAGGTCAGAGGCACAGGGCCAGCATCGAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGCGGTGCTTCAGGGATGGGCTCCCACGTACACACCACCAACCCGACCACACCGACAACATGGTCACTTaGCCCAGAACAGCTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QRCFRDGLPRTHHQPDHTDNMVT*PRTASL Trigger: CAGAGAAGCTGTTCTGGGCAAAGTGACCATGTTGTC...GGTGTGGTCGGGTTGGTGGTGTGTACGTGGGAGCCCATCCCTGAAGCACCGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | CGGAAGAAGTCATCATGGTCACTCCAGGCCTGCGCCTaGAGAAGACCTGGCCACTTCTGGCTTTCACCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKKSSWSLQACA*RRPGHFWLSPW Trigger: CCAGGGTGAAAGCCAGAAGTGGCCAGGTCTTCTTCAGGCGCAGGCCTGGAGTGACCATGATGACTTCTTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | CTAGGACAATGTAGAACGAGCCCACACTTCTGCCTGTaGTTCCTTCCCGAGCGCATCTGCCCCAGTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LGQCRTSPHFCL*FLPERICPSPV Trigger: GACAGGACTGGGGCAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTCGTTCTACATTGTCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | AACCCCAGTCTTCCATTAGAAAGGCACCAGCTGCAATaGCAGAGGCAACCTGGGGCCTCAGGAAGGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: NPSLPLERHQLQ*QRQPGASGRLH Trigger: GTGCAGCCTTCCTGAGGCCCCAGGTTGCCTCTGCCATTGCAGCTGGTGCCTTTCTAATGGAAGACTGGGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | TGGCCCTGTGCCTCTGACCTGCTCATGAGCCACCTGTaGAACTTCCACTCTCGCTGTCTCAAATCCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: WPCASDLLMSHL*NFHSRCLKSTP Trigger: AGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGCAGGTCAGAGGCACAGGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | TGGGGGCTCATGCAACCCAGATCAGATGTGCTGCACTaGAGAACGGGAATGGGGTGGTCAGGAACAAGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WGLMQPRSDVLH*RTGMGWSGTSE Trigger: CTCACTTGTTCCTGACCACCCCATTCCCGTTCTTCAGTGCAGCACATCTGATCTGGGTTGCATGAGCCCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | GCAGTCTCCACATTCCCACCAGGCCATGCTGTGCTCTaGAGCAATCGAATTCAGTTGGAGAAGGGGCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVSTFPPGHAVL*SNRIQLEKGPG Trigger: TCCTGGCCCCTTCTCCAACTGAATTCGATTGCTTCAGAGCACAGCATGGCCTGGTGGGAATGTGGAGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | GACAGTGGGGGCTCATGCAACCCAGATCAGATGTGCTaGACTGAAGAACGGGAATGGGGTGGTCAGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: DSGGSCNPDQMC*TEEREWGGQEQ Trigger: TTGTTCCTGACCACCCCATTCCCGTTCTTCAGTGCAGCACATCTGATCTGGGTTGCATGAGCCCCCACTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | TATAAGCAGCCTGGGCTCTTGCTAACTACAGCCACTTaGTTCTATGCCACGGGCTGGGGCTGTCTGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: YKQPGLLLTTAT*FYATGWGCLTG Trigger: ACCAGTCAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCCAGGCTGCTTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | CCACACTTCTGCCTGTGCTTCCTTCCCGAGCGCATCTaGCCCAGTCCTGTCCCAGAAACAAGGCTTATATTC | + |
|
Preference number: 3 (lower is better) Translates to: PHFCLCFLPERI*PSPVPETRLIF Trigger: GAATATAAGCCTTGTTTCTGGGACAGGACTGGGGCAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | CACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATaGAGTGAGCTCTACTCGGGAGCTTCCTTCCAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: HPTRATAASDWG*SELYSGASFQE Trigger: TTCTTGGAAGGAAGCTCCCGAGTAGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | ATGTTGCCAACCTCCCAAGTGACCCTTACAGGACAGTaGGGGCTCATGCAACCCAGATCAGATGTGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MLPTSQVTLTGQ*GLMQPRSDVLH Trigger: GTGCAGCACATCTGATCTGGGTTGCATGAGCCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | CAGTGGGTTACAGACGGCTGGCTTTTGGGGAGGCTGTaGCGGAATCTCCCTAAATCCTTTCTTCTTACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QWVTDGWLLGRL*RNLPKSFLLTR Trigger: CCTTGTAAGAAGAAAGGATTTAGGGAGATTCCGGCACAGCCTCCCCAAAAGCCAGCCGTCTGTAACCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | AAGGGATACCTGGGTCTTGAGGGTGCAGTGAACTTGTaGCATAAAAGTGATTCCCCACTTGGTGCTCTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: KGYLGLEGAVNL*HKSDSPLGALP Trigger: CGGGAGAGCACCAAGTGGGGAATCACTTTTATGGCACAAGTTCACTGCACCCTCAAGACCCAGGTATCCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | AGCAAGATGAACAGTGGGTTACAGACGGCTGGCTTTTaGGGAGGCTGTGCCGGAATCTCCCTAAATCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SKMNSGLQTAGF*GGCAGISLNPF Trigger: GAAAGGATTTAGGGAGATTCCGGCACAGCCTCCCCAAAAGCCAGCCGTCTGTAACCCACTGTTCATCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | CAGGCCATGCTGTGCTCTGAAGCAATCGAATTCAGTTaGAGAAGGGGCCAGGATCGATGCACATGCTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: QAMLCSEAIEFS*RRGQDRCTCSK Trigger: CTTAGAGCATGTGCATCGATCCTGGCCCCTTCTCCAACTGAATTCGATTGCTTCAGAGCACAGCATGGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | AGCATTGTCAAGAACGCAGAGCAGTCTCTCCTTAGCTaGGGAAAGGAGGTGCCAATTAGGCACGTGCTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SIVKNAEQSLLS*GKEVPIRHVLF Trigger: GAACAGCACGTGCCTAATTGGCACCTCCTTTCCTCAGCTAAGGAGAGACTGCTCTGCGTTCTTGACAATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | GAGCACAAAGACCTCCCAATGTCACTGTGTGGACAGTaGGATGATAAGGGATACCTGGGTCTTGAGGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: EHKDLPMSLCGQ*DDKGYLGLEGA Trigger: TGCACCCTCAAGACCCAGGTATCCCTTATCATCTCACTGTCCACACAGTGACATTGGGAGGTCTTTGTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | ATGGAAGCAAGAAGAATCAAGTGGAGACTGTGCGGTTaGTTGGTCACGAGCATCACATCTGGAAGCTCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: MEARRIKWRLCG*LVTSITSGSSR Trigger: GCGAGAGCTTCCAGATGTGATGCTCGTGACCAAGCAACCGCACAGTCTCCACTTGATTCTTCTTGCTTCCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCATGAGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCAAAAGTGAACTGTCCTaGGCTGGGTCAATCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: AHEPPVQLPLSLSQIHTSKSELS*AGSICF Trigger: AAAACAGATTGACCCAGCCAAGGACAGTTCACTTTT...GGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | TGTCCTTGGCTGGGTCAATCTGTTTTAAAAGTGCCCTaGCATGTGTCTGCAGGGAGCACAAAGACCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CPWLGQSVLKVP*HVSAGSTKTSQ Trigger: TTGGGAGGTCTTTGTGCTCCCTGCAGACACATGTCAGGGCACTTTTAAAACAGATTGACCCAGCCAAGGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | ACGCAGAGCAGTCTCTCCTTAGCTGAGGAAAGGAGGTaGCAATTAGGCACGTGCTGTTCAAATGGTTCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: TQSSLSLAEERR*QLGTCCSNGSK Trigger: TTTGGAACCATTTGAACAGCACGTGCCTAATTGGCACCTCCTTTCCTCAGCTAAGGAGAGACTGCTCTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | GGTCACTTTGCCCAGAACAGCTTCTCTGTCCACACCTaGAGCCAAGGAGTCATCTTCAGAAGAAAGACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: GHFAQNSFSVHT*SQGVIFRRKTS Trigger: TGAAGTCTTTCTTCTGAAGATGACTCCTTGGCTGCAGGTGTGGACAGAGAAGCTGTTCTGGGCAAAGTGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | TCAGGAATGGAAGCAAGAAGAATCAAGTGGAGACTGTaGGGTTGCTTGGTCACGAGCATCACATCTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SGMEARRIKWRL*GCLVTSITSGS Trigger: GCTTCCAGATGTGATGCTCGTGACCAAGCAACCGCACAGTCTCCACTTGATTCTTCTTGCTTCCATTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | AAGCAAGAAGAATCAAGTGGAGACTGTGCGGTTGCTTaGTCACGAGCATCACATCTGGAAGCTCTCGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: KQEESSGDCAVA*SRASHLEALAE Trigger: TTCAGCGAGAGCTTCCAGATGTGATGCTCGTGACCAAGCAACCGCACAGTCTCCACTTGATTCTTCTTGCTT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | GAGATGATAAGGGATACCTGGGTCTTGAGGGTGCAGTaGACTTGTGCCATAAAAGTGATTCCCCACTTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: EMIRDTWVLRVQ*TCAIKVIPHLV Trigger: CACCAAGTGGGGAATCACTTTTATGGCACAAGTTCACTGCACCCTCAAGACCCAGGTATCCCTTATCATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | GAAAAATCCTATACTTCTGATTTAAAGGCTCAGCAGTaGGGGGAGACTCGGGTCACATGCAGCCTGCTCGAT | + |
|
Preference number: 3 (lower is better) Translates to: EKSYTSDLKAQQ*GETRVTCSLLD Trigger: ATCGAGCAGGCTGCATGTGACCCGAGTCTCCCCTCACTGCTGAGCCTTTAAATCAGAAGTATAGGATTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | TTCCAGGATCTCAAGCTGCAAGTAGAAATGTTAGCTTaGGAGATCAGCAGCTCAGCTAACCTCTGTGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: FQDLKLQVEMLA*EISSSANLCVL Trigger: CAGCACACAGAGGTTAGCTGAGCTGCTGATCTCTCAAGCTAACATTTCTACTTGCAGCTTGAGATCCTGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | AGCCATGACTGTCTACCTCCTGACCCTCTCATTCAGTaGCTGAATGACCGTTTCACTAAACAAAAGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SHDCLPPDPLIQ*LNDRFTKQKKP Trigger: TGGCTTCTTTTGTTTAGTGAAACGGTCATTCAGCCACTGAATGAGAGGGTCAGGAGGTAGACAGTCATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CAA 90 bp | GGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTCTCGGAAAAAGTGAACTGTCCTaGGCTGGGTCAATCTGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GSGILAVNAELISLQTLGKSELS*AGSICF Trigger: AAAACAGATTGACCCAGCCAAGGACAGTTCACTTTT...TCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | ATGACTGTCTACCTCCTGACCCTCTCATTCAGTGGCTaGATGACCGTTTCACTAAACAAAAGAAGCCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: MTVYLLTLSFSG*MTVSLNKRSHQ Trigger: TTGGTGGCTTCTTTTGTTTAGTGAAACGGTCATTCAGCCACTGAATGAGAGGGTCAGGAGGTAGACAGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR TCA 72 bp | ATAGAGAGTAGGATCTGGGATCCTGGCTGTGAATGCTaGACTGATCTCATTACAAACTCTCGGAGAAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: IESRIWDPGCEC*TDLITNSRRRQ Trigger: CTGTCTTCTCCGAGAGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCCTACTCTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTAGGAAGAGGAGTTGTGAAAACTACTTGGATGCACAGCCAGGTTCTACAGTCTATGAAAATAGCATaGTCAAGAACGCAGAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GLGRGVVKTTWMHSQVLQSMKIA*SRTQSS Trigger: ACTGCTCTGCGTTCTTGACAATGCTATTTTCATAGA...CTGTAGAACCTGGCTGTGCATCCAAGTAGTTTTCACAACTCCTCTTCCTAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CCA 72 bp | TACCCAGAGTATATGCAGATACACTCATGGCACAGCTaGGGAAACTTGAGGTTTCTCTACACAAACTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: YPEYMQIHSWHS*GNLRFLYTNYS Trigger: AGAATAGTTTGTGTAGAGAAACCTCAAGTTTCCCCAGCTGTGCCATGAGTGTATCTGCATATACTCTGGGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR-3UTR CAA 90 bp | CAGTGGCTGAATGACCGTTTCACTAAACAAAAGAAGCCACCAAAAGTGAACTGTTCTATGAAAATAGCATaGTCAAGAACGCAGAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: QWLNDRFTKQKKPPKVNCSMKIA*SRTQSS Trigger: ACTGCTCTGCGTTCTTGACAATGCTATTTTCATAGA...ACAGTTCACTTTTGGTGGCTTCTTTTGTTTAGTGAAACGGTCATTCAGCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR GCA 72 bp | AAAATATTATATTTCTTTAATACTCTGCCTGATGGATaGTTCATACGCTGTGGGAAAGCTAAGTGTGAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: KILYFFNTLPDG*FIRCGKAKCES Trigger: AGACTCACACTTAGCTTTCCCACAGCGTATGAAGCATCCATCAGGCAGAGTATTAAAGAAATATAATATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CCA 90 bp | CACCAGGTCCTCAGGTGGGCGCTGCAGCACACGTGCGGGGCTCGGAAGCTTCTATGCACAGGGTGGCGTTaGGGTGCAGGGTGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: HQVLRWALQHTCGARKLLCTGWR*GAGWQG Trigger: CCCCTGCCACCCTGCACCCCAACGCCACCCTGTGCA...TAGAAGCTTCCGAGCCCCGCACGTGTGCTGCAGCGCCCACCTGAGGACCTGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGGTGCTTCAGGGATGGGCTCCCACGTACACACCACCAACCCGACCACACCGTTGTGTTGAGGGGCTaGTTGAGCTGCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRCFRDGLPRTHHQPDHTVVLRG*LSCRTV Trigger: CACAGTCCTGCAGCTCAAGCAGCCCCTCAACACAAC...GGTGTGGTCGGGTTGGTGGTGTGTACGTGGGAGCCCATCCCTGAAGCACCGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CCA 90 bp | CCTGATTCTCTCACAGCAGCCACGGAAGAAGTCATCATGGTCACTCCAGGCCTGTGCACAGGGTGGCGTTaGGGTGCAGGGTGGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDSLTAATEEVIMVTPGLCTGWR*GAGWQG Trigger: CCCCTGCCACCCTGCACCCCAACGCCACCCTGTGCA...CAGGCCTGGAGTGACCATGATGACTTCTTCCGTGGCTGCTGTGAGAGAATCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR TCA 90 bp | GAGCCCACACTTCTGCCTGTGCTTCCTTCCCGAGCGCATCTGCCCCAGTCCTGTCCAGTGATGTTGGGGTaGAACCATCTCCGCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EPTLLPVLPSRAHLPQSCPVMLG*NHLRDV Trigger: GACATCGCGGAGATGGTTTCACCCCAACATCACTGG...ACAGGACTGGGGCAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACAGGACAGTGGGGGGGCCAATCCCAGCGCTaGAGTGAACCACGACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVLTMLPTSQVTLTGQWGGQSQR*SEPRQG Trigger: GCCCTGTCGTGGTTCACTGCAGCGCTGGGATTGGCC...CCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCT 60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CCA 90 bp | CTGCCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCATCGCCTTCCCACCCCAGACTCGAGAGTTCTCCTaGAACACCATCCGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLFILSQGPGSIAFPPQTREFS*NTIRQK Trigger: CTTCTGGCGGATGGTGTTCCAGGAGAACTCTCGAGT...CTGGGGTGGGAAGGCGATGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTTGCTAACTACAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGGTTGTGTTGAGGGGCTaGTTGAGCTGCAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLLTTATCFYATGWGCLVVLRG*LSCRTV Trigger: CACAGTCCTGCAGCTCAAGCAGCCCCTCAACACAAC...CAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | GACACCCAGGAGAAGAGACAGGGAAACACCTCCCTGAAGCAGACACCCAGGGTTGGGTCACTTTGGACTTaGCGTCGTTGCTCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTQEKRQGNTSLKQTPRVGSLWT*RRCSPL Trigger: AAGGGGAGAGCAACGACGGCAAGTCCAAAGTGACCC...AACCCTGGGTGTCTGCTTCAGGGAGGTGTTTCCCTGTCTCTTCTCCTGGGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CAA 72 bp | ACCTCCCTGAAGCAGACACCCAGGGTTCTGACCATGTaGCCAACCTCCCAAGTGACCCTTACAGGACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLKQTPRVLTM*PTSQVTLTGQW Trigger: CCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCTGCTTCAGGGAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR TCA 90 bp | GAAGCAGACACCCAGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACCCAGTGATGTTGGGGTaGAACCATCTCCGCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EADTQGSDHVANLPSDPYPVMLG*NHLRDV Trigger: GACATCGCGGAGATGGTTTCACCCCAACATCACTGG...GTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCTGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTTGCTAACTACAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGCAGCAGGAGATTCTCTaGCTCCACACCAGTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: GLLLTTATCFYATGWGCLQQEIL*LHTSDV Trigger: AACATCACTGGTGTGGAGGCAGAGAATCTCCTGCTG...CAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | AGTCATCATGGTCACTCCAGGCCTGCGCCTGAAGAAGACCTGGCCACTTCTGGCTTCAGAGGTAGGGTCTaGACAGTTCAGCGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: SHHGHSRPAPEEDLATSGFRGRV*TVQRVL Trigger: AAGTACCCGCTGAACTGTGCAGACCCTACCTCTGAA...GCCAGAAGTGGCCAGGTCTTCTTCAGGCGCAGGCCTGGAGTGACCATGATGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | CAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTACGGGTCACTTTGGACTTaGCGTCGTTGCTCTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QHPTRATAASDWGCSELYGSLWT*RRCSPL Trigger: AAGGGGAGAGCAACGACGGCAAGTCCAAAGTGACCC...GTAGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | CCAGGACTGCCGCTCTTCATACTCAGCCAAGGCCCGGGAAGCATCGCCTTCCCAAGTTTGCATTCCTGTTaGTGGAGCGTCTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPLFILSQGPGSIAFPSLHSC*WSVSNS Trigger: AGAGTTTGAGACGCTCCAGCAACAGGAATGCAAACT...TGGGAAGGCGATGCTTCCCGGGCCTTGGCTGAGTATGAAGAGCGGCAGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTCTTGCTAACTACAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGTTTCTTTTGCTTTTCTaGTCCTCCTCGATCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLLTTATCFYATGWGCLFLLLF*SSSIRR Trigger: GCGCCGGATCGAGGAGGAGCAGAAAAGCAAAAGAAA...CAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACAGGACAGTGGGGGCAGCAGGAGATTCTCTaGCTCCACACCAGTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVLTMLPTSQVTLTGQWGQQEIL*LHTSDV Trigger: AACATCACTGGTGTGGAGGCAGAGAATCTCCTGCTG...CCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | GTTTACACCAGATACTATAAGCAGCCTGGGCTCTTGCTAACTACAGCCACTTGCGGCCAATCCCAGCGCTaGAGTGAACCACGACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYTRYYKQPGLLLTTATCGQSQR*SEPRQG Trigger: GCCCTGTCGTGGTTCACTGCAGCGCTGGGATTGGCC...GCAAGTGGCTGTAGTTAGCAAGAGCCCAGGCTGCTTATAGTATCTGGTGTAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR TCA 90 bp | GGGCTCTTGCTAACTACAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGTCTTTTCCAGACAAGTaGCCATGGAACCACCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLLTTATCFYATGWGCLSFPDK*PWNHLS Trigger: TGAAAGGTGGTTCCATGGTCACTTGTCTGGAAAAGA...CAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CAA 72 bp | CAGCAAGATGAACAGTGGGTTACAGACGGCTGGCTTTaGGGGAGGCTGTGCCGGAATCTCCCTAAATCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QQDEQWVTDGWL*GRLCRNLPKSF Trigger: AAAGGATTTAGGGAGATTCCGGCACAGCCTCCCCAAAAGCCAGCCGTCTGTAACCCACTGTTCATCTTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR TCA 90 bp | GACACCCAGGAGAAGAGACAGGGAAACACCTCCCTGAAGCAGACACCCAGGGTTTCTTTTCCAGACAAGTaGCCATGGAACCACCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: DTQEKRQGNTSLKQTPRVSFPDK*PWNHLS Trigger: TGAAAGGTGGTTCCATGGTCACTTGTCTGGAAAAGA...AACCCTGGGTGTCTGCTTCAGGGAGGTGTTTCCCTGTCTCTTCTCCTGGGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCCTTTGTCGTCACCAGTaGGCACGGAGAGAACGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CATSTLAVSNPHLPYLIFLCRHQ*ARRERS Trigger: ACTTCGTTCTCTCCGTGCGCACTGGTGACGACAAAG...GAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGGCTGAATGACCGTTTCACTAAACAAAAGAAGCCACCAAAAGTGAACTGTAGGGGCTGCTTGAGCTaGAGGACTGTGCCCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QWLNDRFTKQKKPPKVNCRGCLS*RTVPSV Trigger: GACGCTGGGCACAGTCCTGCAGCTCAAGCAGCCCCT...ACAGTTCACTTTTGGTGGCTTCTTTTGTTTAGTGAAACGGTCATTCAGCCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | CAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTACAGTTTGCATTCCTGTTaGTGGAGCGTCTCAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHPTRATAASDWGCSELYSLHSC*WSVSNS Trigger: AGAGTTTGAGACGCTCCAGCAACAGGAATGCAAACT...GTAGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CCA 90 bp | TGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCACTCGAGAGTTCTCCTaGAACACCATCCGCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CATSTLAVSNPHLPYLIFTREFS*NTIRQK Trigger: CTTCTGGCGGATGGTGTTCCAGGAGAACTCTCGAGT...GAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCTTCAGAGGTAGGGTCTaGACAGTTCAGCGGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: CATSTLAVSNPHLPYLIFFRGRV*TVQRVL Trigger: AAGTACCCGCTGAACTGTGCAGACCCTACCTCTGAA...GAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | GAAGCAGACACCCAGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACTGGGTTTGGAATTGTTaGACTTGGTCTCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EADTQGSDHVANLPSDPYWVWNC*TWSQTQ Trigger: CTGAGTTTGAGACCAAGTGCAACAATTCCAAACCCA...GTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCTGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CCA 90 bp | GTTTACACCAGATACTATAAGCAGCCTGGGCTCTTGCTAACTACAGCCACTTGCCTCTCTGTGTTTCCCTaGAGTAGAGCTTGTCCGACC | + |
|
Preference number: 4 (lower is better) Translates to: VYTRYYKQPGLLLTTATCLSVFP*SRACPT Trigger: GGTCGGACAAGCTCTACTCCAGGGAAACACAGAGAG...GCAAGTGGCTGTAGTTAGCAAGAGCCCAGGCTGCTTATAGTATCTGGTGTAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054547.9 |
||
| 3UTR CAA 72 bp | GATAAGGGATACCTGGGTCTTGAGGGTGCAGTGAACTaGTGCCATAAAAGTGATTCCCCACTTGGTGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKGYLGLEGAVN*CHKSDSPLGAL Trigger: GAGAGCACCAAGTGGGGAATCACTTTTATGGCACAAGTTCACTGCACCCTCAAGACCCAGGTATCCCTTATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| 3UTR CAA 72 bp | AATGGAAGCAAGAAGAATCAAGTGGAGACTGTGCGGTaGCTTGGTCACGAGCATCACATCTGGAAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NGSKKNQVETVR*LGHEHHIWKLS Trigger: CGAGAGCTTCCAGATGTGATGCTCGTGACCAAGCAACCGCACAGTCTCCACTTGATTCTTCTTGCTTCCATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | TGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCTGGGTTTGGAATTGTTaGACTTGGTCTCAAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CATSTLAVSNPHLPYLIFWVWNC*TWSQTQ Trigger: CTGAGTTTGAGACCAAGTGCAACAATTCCAAACCCA...GAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTAGGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTTTTCTTTTGCTTTTCTaGTCCTCCTCGATCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RVGSGILAVNAELISLQTFLLLF*SSSIRR Trigger: GCGCCGGATCGAGGAGGAGCAGAAAAGCAAAAGAAA...AGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCCTACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTCTTGCTAACTACAGCCACTTGCTTCTATGCCACGGGCTGGGGCTGTCTGAGGAAGCTGCCATGCTaGCCCTTCTCCGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLLLTTATCFYATGWGCLRKLPC*PFSVSS Trigger: GCTGCTGACGGAGAAGGGCAAGCATGGCAGCTTCCT...CAGACAGCCCCAGCCCGTGGCATAGAAGCAAGTGGCTGTAGTTAGCAAGAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACAGGACAGTGGGGGTCGTTGCTCTCCCCTTaGTCGTCACCAGTGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: RVLTMLPTSQVTLTGQWGSLLSP*SSPVRT Trigger: CGTGCGCACTGGTGACGACAAAGGGGAGAGCAACGA...CCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | GCTCATGAGCCACCTGTGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCGTGTTGAGGGGCTGCTaGAGCTGCAGGACTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AHEPPVQLPLSLSQIHTSVLRGC*SCRTVP Trigger: GGGCACAGTCCTGCAGCTCAAGCAGCCCCTCAACAC...GGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCACAGGTGGCTCATGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | GAGCCCACACTTCTGCCTGTGCTTCCTTCCCGAGCGCATCTGCCCCAGTCCTGTCAGTTCAGCGGGTACTaGAGCTCGATAACATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPTLLPVLPSRAHLPQSCQFSGY*SSITSP Trigger: TGGAGATGTTATCGAGCTCAAGTACCCGCTGAACTG...ACAGGACTGGGGCAGATGCGCTCGGGAAGGAAGCACAGGCAGAAGTGTGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | GAAGCAGACACCCAGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACAGGAAGCTGCCATGCTaGCCCTTCTCCGTCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EADTQGSDHVANLPSDPYRKLPC*PFSVSS Trigger: GCTGCTGACGGAGAAGGGCAAGCATGGCAGCTTCCT...GTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCTGGGTGTCTGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | TGCAACTTCCACTCTCGCTGTCTCAAATCCACACCTCCCATACCTCATCTTCCCGTGTTGAGGGGCTGCTaGAGCTGCAGGACTGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CNFHSRCLKSTPPIPHLPVLRGC*SCRTVP Trigger: GGGCACAGTCCTGCAGCTCAAGCAGCCCCTCAACAC...GGGAAGATGAGGTATGGGAGGTGTGGATTTGAGACAGCGAGAGTGGAAGTTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | AGGGTTCTGACCATGTTGCCAACCTCCCAAGTGACCCTTACAGGACAGTGGGGGGACTCTGATCACCACTaGTCTGGTCCACCAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RVLTMLPTSQVTLTGQWGDSDHH*SGPPRN Trigger: ATTCCTTGGTGGACCAGACAAGTGGTGATCAGAGTC...CCCCCACTGTCCTGTAAGGGTCACTTGGGAGGTTGGCAACATGGTCAGAACCCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | CTCAACACCCCACAAGAGCAACAGCTGCTAGTGACTGGGGATGCAGTGAGCTCTCAGTTCAGCGGGTACTaGAGCTCGATAACATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LNTPQEQQLLVTGDAVSSQFSGY*SSITSP Trigger: TGGAGATGTTATCGAGCTCAAGTACCCGCTGAACTG...AGAGCTCACTGCATCCCCAGTCACTAGCAGCTGTTGCTCTTGTGGGGTGTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | CCTGATTCTCTCACAGCAGCCACGGAAGAAGTCATCATGGTCACTCCAGGCCTGGACTCTGATCACCACTaGTCTGGTCCACCAAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PDSLTAATEEVIMVTPGLDSDHH*SGPPRN Trigger: ATTCCTTGGTGGACCAGACAAGTGGTGATCAGAGTC...CAGGCCTGGAGTGACCATGATGACTTCTTCCGTGGCTGCTGTGAGAGAATCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | GTTTACACCAGATACTATAAGCAGCCTGGGCTCTTGCTAACTACAGCCACTTGCAAGTTTGCATTCCTGTaGCTGGAGCGTCTCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: VYTRYYKQPGLLLTTATCKFAFL*LERLKL Trigger: GAGTTTGAGACGCTCCAGCAACAGGAATGCAAACTT...GCAAGTGGCTGTAGTTAGCAAGAGCCCAGGCTGCTTATAGTATCTGGTGTAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTAGGATCTGGGATCCTGGCTGTGAATGCTGAACTGATCTCATTACAAACTAAGTTTGCATTCCTGTaGCTGGAGCGTCTCAAACTC | + |
|
Preference number: 5 (lower is better) Translates to: RVGSGILAVNAELISLQTKFAFL*LERLKL Trigger: GAGTTTGAGACGCTCCAGCAACAGGAATGCAAACTT...AGTTTGTAATGAGATCAGTTCAGCATTCACAGCCAGGATCCCAGATCCTACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054547.9 ENSMUST00000100770.9 |
||
| CDS CCA 72 bp | AAGTGGTACTGCCAGACGGTTCTCTCTGTGTTTCCCTaGAGTAGAGCTTGTCCGACCTTAGAGAGTTTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KWYCQTVLSVFP*SRACPTLESLS Trigger: GCTCAAACTCTCTAAGGTCGGACAAGCTCTACTCCAGGGAAACACAGAGAGAACCGTCTGGCAGTACCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054547.9 |
||