Pregenerated sensors for PTPN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027540Ensembl transcript IDs: ENSMUST00000029053.8
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCGATTaGACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: CSAEAGMQALLLGSD*TKASALDGATAPAS Trigger: GGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CCA 90 bp | GGCTCTGCTGCTGGGCAGCGATTGCACAAAGGCATCCGCACTGGATaGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGCCATACCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GSAAGQRLHKGIRTG*SHSAGLPTASAIPA Trigger: TGCTGGTATGGCTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CCA 90 bp | TGCAGGCTCTGCTGCTGGGCAGCGATTGCACAAAGGCATCCGCACTaGATGGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGCCATACC | + |
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Preference number: 1 (lower is better) Translates to: CRLCCWAAIAQRHPH*MEPQRRPPHGLSHT Trigger: GGTATGGCTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR GCA 90 bp | TTTGGGCCGCCATGGCCATTGTGGCCTGCAGCGCAGAGGCTGGCATaGAGGCTCTGCTGCTGGGCAGCGATTGCACAAAGGCATCCGCAC | + |
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Preference number: 1 (lower is better) Translates to: FGPPWPLWPAAQRLA*RLCCWAAIAQRHPH Trigger: GTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGCCATGGCGGCCCAAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CCA 90 bp | GGAATGTCTGAGATCCAGCGGGGCATGGCGTGGCGTGGCGTGGAGTaGCAGGACGGAAGCCTGAAGTGTCCTGCCAGGAGTCAGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: GMSEIQRGMAWRGVE*QDGSLKCPARSQVA Trigger: TGCCACCTGACTCCTGGCAGGACACTTCAGGCTTCCGTCCTGCCACTCCACGCCACGCCACGCCATGCCCCGCTGGATCTCAGACATTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CCA 90 bp | CACTCTTTGGGCCGCCATGGCCATTGTGGCCTGCAGCGCAGAGGCTaGCATGCAGGCTCTGCTGCTGGGCAGCGATTGCACAAAGGCATC | + |
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Preference number: 1 (lower is better) Translates to: HSLGRHGHCGLQRRG*HAGSAAGQRLHKGI Trigger: GATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGCCATGGCGGCCCAAAGAGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR TCA 90 bp | CTGCCAGGAGTCAGGTGGCACCTGACTGGACAGCACTGCTCTCACTaGGTGGCGGTGGTTACTCAGCGACGGCCACTTCCGGTCAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: LPGVRWHLTGQHCSH*VAVVTQRRPLPVRA Trigger: TGCTCTGACCGGAAGTGGCCGTCGCTGAGTAACCACCGCCACTCAGTGAGAGCAGTGCTGTCCAGTCAGGTGCCACCTGACTCCTGGCAG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR GCA 90 bp | CAGACACAGCCCACTGCTAACTGCTCCCAGCCTGGACCCTGGCTGTaGCACCTCCTCAGGCTCTGCAGGCAAGGCTATCACTGTTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: QTQPTANCSQPGPWL*HLLRLCRQGYHCSP Trigger: TGGGGAACAGTGATAGCCTTGCCTGCAGAGCCTGAGGAGGTGGCACAGCCAGGGTCCAGGCTGGGAGCAGTTAGCAGTGGGCTGTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR TCA 90 bp | GCAGGACGGAAGCCTGAAGTGTCCTGCCAGGAGTCAGGTGGCACCTaGCTGGACAGCACTGCTCTCACTGAGTGGCGGTGGTTACTCAGC | + |
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Preference number: 1 (lower is better) Translates to: AGRKPEVSCQESGGT*LDSTALTEWRWLLS Trigger: GCTGAGTAACCACCGCCACTCAGTGAGAGCAGTGCTGTCCAGTCAGGTGCCACCTGACTCCTGGCAGGACACTTCAGGCTTCCGTCCTGC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR TCA 90 bp | AAGCCGCACCCCGCTCTAATGCCTGCCCCTCCCTTGCACTCCTCATaGTGGTGGGCTTGCTACTCGGGAAGGAAGCAGAGGGTAAAGCAG | + |
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Preference number: 1 (lower is better) Translates to: KPHPALMPAPPLHSS*WWACYSGRKQRVKQ Trigger: CTGCTTTACCCTCTGCTTCCTTCCCGAGTAGCAAGCCCACCATCATGAGGAGTGCAAGGGAGGGGCAGGCATTAGAGCGGGGTGCGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CCA 90 bp | GGGATTTACAGGGATAGGGTGGCAAGGGCTGGGCCATTTGCAAGATaGCACTCACAAAGAGGGAGGAGACCGAGAAGGATGGAACCGCGG | + |
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Preference number: 1 (lower is better) Translates to: GIYRDRVARAGPFAR*HSQRGRRPRRMEPR Trigger: CCGCGGTTCCATCCTTCTCGGTCTCCTCCCTCTTTGTGAGTGCCATCTTGCAAATGGCCCAGCCCTTGCCACCCTATCCCTGTAAATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CCA 90 bp | AGAACTGTGTATCTTCTAACTCACAGGGAAAGCAGAGGCCGGGAATaGGATCTAGAAGGTCGTGGGCAGAAAGCCCAGCCTCCACCCTGC | + |
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Preference number: 1 (lower is better) Translates to: RTVYLLTHRESRGRE*DLEGRGQKAQPPPC Trigger: GCAGGGTGGAGGCTGGGCTTTCTGCCCACGACCTTCTAGATCCCATTCCCGGCCTCTGCTTTCCCTGTGAGTTAGAAGATACACAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR GCA 90 bp | GGTGCACAGTGGGGGCTGCCCACGCCAGCAGGAACTTTACAGTCCTaGCCAGCGGGATCCTTCCACTGGAAATCAATAGAAATCATGAAT | + |
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Preference number: 1 (lower is better) Translates to: GAQWGLPTPAGTLQS*PAGSFHWKSIEIMN Trigger: ATTCATGATTTCTATTGATTTCCAGTGGAAGGATCCCGCTGGGCAGGACTGTAAAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CCA 90 bp | GTAGAGTGGCTTCCACACAGAGTAGTAATGACTTTCCAAATGAAATaGAAACCCCAGCACTTAGGCTGGCAGCCACCTCTGACCCCGAGG | + |
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Preference number: 1 (lower is better) Translates to: VEWLPHRVVMTFQMK*KPQHLGWQPPLTPR Trigger: CCTCGGGGTCAGAGGTGGCTGCCAGCCTAAGTGCTGGGGTTTCCATTTCATTTGGAAAGTCATTACTACTCTGTGTGGAAGCCACTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR TCA 90 bp | AGAAAGACAAAGAGAGAGAGAGACAGAGCCCTGCTGAGTAAATGTTaGCTTAAGGCATACAGCAGCTTGCTACCTCCAACAGGGGCGACA | + |
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Preference number: 1 (lower is better) Translates to: RKTKRERDRALLSKC*LKAYSSLLPPTGAT Trigger: TGTCGCCCCTGTTGGAGGTAGCAAGCTGCTGTATGCCTTAAGTCAACATTTACTCAGCAGGGCTCTGTCTCTCTCTCTCTTTGTCTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR TCA 90 bp | GAGAGAGAGAGAGAAAGACAAAGAGAGAGAGAGACAGAGCCCTGCTaGGTAAATGTTGACTTAAGGCATACAGCAGCTTGCTACCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: ERERERQRERETEPC*VNVDLRHTAACYLQ Trigger: TTGGAGGTAGCAAGCTGCTGTATGCCTTAAGTCAACATTTACTCAGCAGGGCTCTGTCTCTCTCTCTCTTTGTCTTTCTCTCTCTCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CAA 90 bp | CTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCGATaGCACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LQRRGWHAGSAAGQR*HKGIRTGWSHSAGL Trigger: GAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | ACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGGGCAGCCCATGTGGCTaGCCTCCTCACAACAGGATG | + |
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Preference number: 2 (lower is better) Translates to: TKASALDGATAPASPRPQGSPCG*PPHNRM Trigger: CATCCTGTTGTGAGGAGGGCAGCCACATGGGCTGCC...CTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | GCGTGGCGTGGCGTGGAGTGGCAGGACGGAAGCCTGAAGTGTCCTGCCAGGAGTCTCTTCACACCCTCCTaGTCCTGCTCCTGGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: AWRGVEWQDGSLKCPARSLFTPS*SCSWPQ Trigger: CTGGGGCCAGGAGCAGGAGCAGGAGGGTGTGAAGAG...ACTCCTGGCAGGACACTTCAGGCTTCCGTCCTGCCACTCCACGCCACGCCACGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATTGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCCAGAGGCAGCCCATGTaGCTGCCCTCCTCACAACAG | + |
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Preference number: 2 (lower is better) Translates to: AIVACSAEAGMQALLLGSQRQPM*LPSSQQ Trigger: CTGTTGTGAGGAGGGCAGCCACATGGGCTGCCTCTG...GCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATTGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCAAGCAGAGCCGGGCTTaGTGTTCAGAGGCAGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: AIVACSAEAGMQALLLGSKQSRA*CSEAAH Trigger: ATGGGCTGCCTCTGAACAGCAAGCCCGGCTCTGCTT...GCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTCCTATGCCCCAGCACTTAGGCTaGCAGCCACCTCTGACCCCG | + |
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Preference number: 2 (lower is better) Translates to: PARRRSSHRGSAHYHCPMPQHLG*QPPLTP Trigger: CGGGGTCAGAGGTGGCTGCCAGCCTAAGTGCTGGGG...CATAGGACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTGGGGCTGGCCCTTCCAGTTCCAGAGCAGGCTTGCGAGTTGTTGTTCCCTGACCGCATCCTAAGCTaGGCAGTGGCAGTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLGLALPVPEQACELLFPDRILS*AVAVPP Trigger: GGGAGGCACTGCCACTGCCCAGCTTAGGATGCGGTC...AGGGAACAACAACTCGCAAGCCTGCTCTGGAACTGGAAGGGCCAGCCCCAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCACCCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTGCACTGGCCATACTGTaGCTCCTGTCAGTCCTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LHPARRRSSHRGSAHYHCALAIL*LLSVLH Trigger: GTGCAGGACTGACAGGAGCCACAGTATGGCCAGTGC...ACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCCGGGAGAGCCACCTCTAAGGCTACTGTACACACCACACTACTCCAGAGCTGGCAGCCACCTCTaGCCCCGAGGCAAGGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: CSPGEPPLRLLYTPHYSRAGSHL*PRGKAL Trigger: GAGGGCCTTGCCTCGGGGTCAGAGGTGGCTGCCAGC...TCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGAGGTGGCTCTCCCGGAGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCCCCACGGCTTTACAGGGATAGGGTaGCAAGGGCTGGGCCATTTG | + |
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Preference number: 2 (lower is better) Translates to: IAQRHPHWMEPQRRPPHGFTGIG*QGLGHL Trigger: CAAATGGCCCAGCCCTTGCCACCCTATCCCTGTAAA...GCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | CTACTGTACACACCACACTACTCCAGACACAGCCCACTGCTAACTGCTCCCAGCTGGCGTGGCGTGGCGTaGAGTGGCAGGACGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LLYTPHYSRHSPLLTAPSWRGVA*SGRTEA Trigger: GGCTTCCGTCCTGCCACTCCACGCCACGCCACGCCA...GCTGGGAGCAGTTAGCAGTGGGCTGTGTCTGGAGTAGTGTGGTGTGTACAGTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | TACTGTTCCCAGGAGGTTGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCCTGCGCAGAGGCTGGCATaGAGGCTCTGCTGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: YCSQEVASHKLPCFQSWPAQRLA*RLCCWA Trigger: TGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGC...AGGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTCCTCAGGCTCTGCAGGCAAGGCTATCACTGTTCCCCAGTGGCTCTGTGCTATACCCTCCTGGGGCTaGCCCTTCCAGTTCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: TSSGSAGKAITVPQWLCAIPSWG*PFQFQS Trigger: GCTCTGGAACTGGAAGGGCCAGCCCCAGGAGGGTAT...AGCACAGAGCCACTGGGGAACAGTGATAGCCTTGCCTGCAGAGCCTGAGGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTGCGCATTACCACTGTCCTATGCTCCTGAAGGCTGCTCTTCACACCCTCTGCCTGCCCCTCCCTTaGACTCCTCATGATGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: GSAHYHCPMLLKAALHTLCLPLP*TPHDGG Trigger: CCCACCATCATGAGGAGTGCAAGGGAGGGGCAGGCA...GAGGGTGTGAAGAGCAGCCTTCAGGAGCATAGGACAGTGGTAATGCGCAGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CAA 90 bp | CGCTCTAATGCCTGCCCCTCCCTTGCACTCCTCATGATGGTGGGCTaGCTACTCGGGAAGGAAGCAGAGGGTAAAGCAGGAAGGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: RSNACPSLALLMMVG*LLGKEAEGKAGREM Trigger: CATCTCCCTTCCTGCTTTACCCTCTGCTTCCTTCCCGAGTAGCAAGCCCACCATCATGAGGAGTGCAAGGGAGGGGCAGGCATTAGAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCACCCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTTTTGAGTCCAGACTCTaGAAATCACCACTCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LHPARRRSSHRGSAHYHCFESRL*KSPLRK Trigger: CTTCCTGAGTGGTGATTTTCAGAGTCTGGACTCAAA...ACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGGCTACTGTACACACCACACTACTCCAGACACAGCCCACTGCTAACTGCCCCCGCTCTAATGCCTaGCCCTCCCTTGCACTCCTC | + |
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Preference number: 2 (lower is better) Translates to: SKATVHTTLLQTQPTANCPRSNA*PSLALL Trigger: GAGGAGTGCAAGGGAGGGGCAGGCATTAGAGCGGGG...GCAGTTAGCAGTGGGCTGTGTCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCCCCACGGCACTTTCCAAATGAAATaGAAACCCCAGCACTTAGGC | + |
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Preference number: 2 (lower is better) Translates to: IAQRHPHWMEPQRRPPHGTFQMK*KPQHLG Trigger: GCCTAAGTGCTGGGGTTTCCATTTCATTTGGAAAGT...GCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCCACCCAATGTGAAGGCTCGGTTCTTCCCCTCCCAGAAGAGTCATGAGTCCTGGCCCCAGCACTaGCCATACTGTGGCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: KKPPNVKARFFPSQKSHESWPQH*PYCGSC Trigger: ACAGGAGCCACAGTATGGCCAGTGCTGGGGCCAGGA...CTCATGACTCTTCTGGGAGGGGAAGAACCGAGCCTTCACATTGGGTGGCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAAGGCTACTGTACACACCACACTACTCCAGACACAGCCCACTGCTAACTGCTCAGAGCACGGGAGGTaGCTGTCAGTGAGCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SKATVHTTLLQTQPTANCSEHGR*LSVSRL Trigger: AAGCCTGCTCACTGACAGGCACCTCCCGTGCTCTGA...GCAGTTAGCAGTGGGCTGTGTCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTCTGCGCATTACCACTGTCCTATGCTCCTGAAGGCTGCTCTTCACACCCTCTTCGAGAGCGTTCACTaGAACAGTGTTTCAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: GSAHYHCPMLLKAALHTLFESVH*NSVSEG Trigger: CCCCTCTGAAACACTGTTCCAGTGAACGCTCTCGAA...GAGGGTGTGAAGAGCAGCCTTCAGGAGCATAGGACAGTGGTAATGCGCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGCCACCCAATGTGAAGGCTCGGTTCTTCCCCTCCCAGAAGAGTCATGAGCCTTGCTTCCAGTCCTaGCCTGCTCCAGGACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: KKPPNVKARFFPSQKSHEPCFQS*PAPGQH Trigger: ATGCTGTCCTGGAGCAGGCCAGGACTGGAAGCAAGG...CTCATGACTCTTCTGGGAGGGGAAGAACCGAGCCTTCACATTGGGTGGCTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR TCA 90 bp | TACTGTTCCCAGGAGGTTGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCCTCACCTCCGGGCAAAGTaGATAAATAAGAGGAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: YCSQEVASHKLPCFQSWPHLRAK*INKRRA Trigger: TGCCCTCCTCTTATTTATTCACTTTGCCCGGAGGTG...AGGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR TCA 90 bp | TCTAAGGCTACTGTACACACCACACTACTCCAGACACAGCCCACTGCTAACTGCACTGTCCTATGCTCCTaGAGGCTGCTCTTCACACCC | + |
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Preference number: 2 (lower is better) Translates to: SKATVHTTLLQTQPTANCTVLCS*RLLFTP Trigger: GGGTGTGAAGAGCAGCCTTCAGGAGCATAGGACAGT...GCAGTTAGCAGTGGGCTGTGTCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCCGGGAGAGCCACCTCTAAGGCTACTGTACACACCACACTACTCCAGATCCTTCAAAGCCCAGTaGACTAATACCCTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CSPGEPPLRLLYTPHYSRSFKAQ*TNTLLG Trigger: CCCCAGGAGGGTATTAGTGCACTGGGCTTTGAAGGA...TCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGAGGTGGCTCTCCCGGAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCCGGGAGAGCCACCTCTAAGGCTACTGTACACACCACACTACTCCAGAAGGGGAGGAGTGAGGTaGGAGCAAGAAGAGTATTTG | + |
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Preference number: 2 (lower is better) Translates to: CSPGEPPLRLLYTPHYSRRGGVR*EQEEYL Trigger: CAAATACTCTTCTTGCTCTCACCTCACTCCTCCCCT...TCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGAGGTGGCTCTCCCGGAGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCCGGGAGAGCCACCTCTAAGGCTACTGTACACACCACACTACTCCAGACACTCAGGAAGTCTTTaGAGTCTGCAAAAATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: CSPGEPPLRLLYTPHYSRHSGSL*SLQKSS Trigger: AGAGGATTTTTGCAGACTGCAAAGACTTCCTGAGTG...TCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGAGGTGGCTCTCCCGGAGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CCA 90 bp | TACTGTTCCCAGGAGGTTGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCCTAGCAAGAAGAGTATTTaGCATTTCCTCTACTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: YCSQEVASHKLPCFQSWPSKKSI*HFLYFS Trigger: GGAGAAGTAGAGGAAATGCCAAATACTCTTCTTGCT...AGGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAAGCCACCCAATGTGAAGGCTCGGTTCTTCCCCTCCCAGAAGAGTCATGAGGAAGTCTTTGCAGTCTaGAAAAATCCTCTATCTGAT | + |
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Preference number: 2 (lower is better) Translates to: KKPPNVKARFFPSQKSHEEVFAV*KNPLSD Trigger: ATCAGATAGAGGATTTTTGCAGACTGCAAAGACTTC...CTCATGACTCTTCTGGGAGGGGAAGAACCGAGCCTTCACATTGGGTGGCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR-3UTR CAA 90 bp | GCGTGGCGTGGCGTGGAGTGGCAGGACGGAAGCCTGAAGTGTCCTGCCAGGAGTGGGCCGCCATGGCCATaGTGGCCTGCAGCGCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: AWRGVEWQDGSLKCPARSGPPWP*WPAAQR Trigger: CCTCTGCGCTGCAGGCCACAATGGCCATGGCGGCCC...ACTCCTGGCAGGACACTTCAGGCTTCCGTCCTGCCACTCCACGCCACGCCACGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR GCA 72 bp | TGCCCTCCTCACAACAGGATGGGGCTCCAGGGCACCTaGAAGCTCCGGGTGCACAGTGGGGGCTGCCCACGC | + |
|
Preference number: 3 (lower is better) Translates to: CPPHNRMGLQGT*KLRVHSGGCPR Trigger: GCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGGTGCCCTGGAGCCCCATCCTGTTGTGAGGAGGGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | GCTGGGCAGCGATTGCACAAAGGCATCCGCACTGGATaGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AGQRLHKGIRTG*SHSAGLPTASA Trigger: GGCTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | GGGGCTCCAGGGCACCTGCAAGCTCCGGGTGCACAGTaGGGGCTGCCCACGCCAGCAGGAACTTTACAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GAPGHLQAPGAQ*GLPTPAGTLQS Trigger: GGACTGTAAAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGGTGCCCTGGAGCCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | TGCTGCTGGGCAGCGATTGCACAAAGGCATCCGCACTaGATGGAGCCACAGCGCCGGCCTCCCCACGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CCWAAIAQRHPH*MEPQRRPPHGL Trigger: GAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | CAGGGCACCTGCAAGCTCCGGGTGCACAGTGGGGGCTaGCCACGCCAGCAGGAACTTTACAGTCCTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGTCKLRVHSGG*PRQQELYSPAQ Trigger: CTGGGCAGGACTGTAAAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGGTGCCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | ACAGGATGGGGCTCCAGGGCACCTGCAAGCTCCGGGTaGACAGTGGGGGCTGCCCACGCCAGCAGGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: TGWGSRAPASSG*TVGAAHASRNF Trigger: AAAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGGTGCCCTGGAGCCCCATCCTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | GAGCCGGGCTTGCTGTTCAGAGGCAGCCCATGTGGCTaGCCTCCTCACAACAGGATGGGGCTCCAGGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: EPGLLFRGSPCG*PPHNRMGLQGT Trigger: GGTGCCCTGGAGCCCCATCCTGTTGTGAGGAGGGCAGCCACATGGGCTGCCTCTGAACAGCAAGCCCGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | CTAGAAGGTCGTGGGCAGAAAGCCCAGCCTCCACCCTaGACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: LEGRGQKAQPPP*TSQEQPQGLCA Trigger: TGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAGGCTGGGCTTTCTGCCCACGACCTTCTAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | GAGGCAGCCCATGTGGCTGCCCTCCTCACAACAGGATaGGGCTCCAGGGCACCTGCAAGCTCCGGGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: EAAHVAALLTTG*GSRAPASSGCT Trigger: TGTGCACCCGGAGCTTGCAGGTGCCCTGGAGCCCCATCCTGTTGTGAGGAGGGCAGCCACATGGGCTGCCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | GAGATCCAGCGGGGCATGGCGTGGCGTGGCGTGGAGTaGCAGGACGGAAGCCTGAAGTGTCCTGCCAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: EIQRGMAWRGVE*QDGSLKCPARS Trigger: ACTCCTGGCAGGACACTTCAGGCTTCCGTCCTGCCACTCCACGCCACGCCACGCCATGCCCCGCTGGATCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR TCA 72 bp | TGGCGTGGCGTGGCGTGGAGTGGCAGGACGGAAGCCTaGAGTGTCCTGCCAGGAGTCAGGTGGCACCTGACT | + |
|
Preference number: 3 (lower is better) Translates to: WRGVAWSGRTEA*SVLPGVRWHLT Trigger: AGTCAGGTGCCACCTGACTCCTGGCAGGACACTTCAGGCTTCCGTCCTGCCACTCCACGCCACGCCACGCCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | AGCAGAGCCGGGCTTGCTGTTCAGAGGCAGCCCATGTaGCTGCCCTCCTCACAACAGGATGGGGCTCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: SRAGLAVQRQPM*LPSSQQDGAPG Trigger: CCCTGGAGCCCCATCCTGTTGTGAGGAGGGCAGCCACATGGGCTGCCTCTGAACAGCAAGCCCGGCTCTGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | CATCGCAGCTCACTCTTTGGGCCGCCATGGCCATTGTaGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HRSSLFGPPWPL*PAAQRLACRLC Trigger: GCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGCCATGGCGGCCCAAAGAGTGAGCTGCGATG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | GGTGTGAGTGTGGAATGTCTGAGATCCAGCGGGGCATaGCGTGGCGTGGCGTGGAGTGGCAGGACGGAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: GVSVECLRSSGA*RGVAWSGRTEA Trigger: GGCTTCCGTCCTGCCACTCCACGCCACGCCACGCCATGCCCCGCTGGATCTCAGACATTCCACACTCACACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | CATCCGTCTCTCCCAGGCCGGAGAGCTGCACACTTCTaGGTAAGGGGCCCTGGGGCCAGCAATGACAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: HPSLPGRRAAHF*VRGPGASNDSR Trigger: CCTGCTGTCATTGCTGGCCCCAGGGCCCCTTACCCAGAAGTGTGCAGCTCTCCGGCCTGGGAGAGACGGATG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | TTGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTaGTGCTGGGCAGCGATTGCACAAAGGCATCCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LWPAAQRLACRL*CWAAIAQRHPH Trigger: GTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | CCATGGCCATTGTGGCCTGCAGCGCAGAGGCTGGCATaGAGGCTCTGCTGCTGGGCAGCGATTGCACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PWPLWPAAQRLA*RLCCWAAIAQR Trigger: CCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGCCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | CCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTaGGCAGCGATTGCACAAAGGCATCCGCACTGGATG | + |
|
Preference number: 3 (lower is better) Translates to: PAAQRLACRLCC*AAIAQRHPHWM Trigger: CATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCCAAGGGCTGGGCCATTaGCAAGATGGCACTCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: AIVACSAEAGMQALLLGSQGLGH*QDGTHK Trigger: TTTGTGAGTGCCATCTTGCAAATGGCCCAGCCCTTG...GCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR-3UTR CAA 90 bp | GCGTGGCGTGGCGTGGAGTGGCAGGACGGAAGCCTGAAGTGTCCTGCCAGGAGTCTCATGATGGTGGGCTaGCTACTCGGGAAGGAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: AWRGVEWQDGSLKCPARSLMMVG*LLGKEA Trigger: TGCTTCCTTCCCGAGTAGCAAGCCCACCATCATGAG...ACTCCTGGCAGGACACTTCAGGCTTCCGTCCTGCCACTCCACGCCACGCCACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR TCA 72 bp | GTCAGGTGGCACCTGACTGGACAGCACTGCTCTCACTaGGTGGCGGTGGTTACTCAGCGACGGCCACTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: VRWHLTGQHCSH*VAVVTQRRPLP Trigger: CGGAAGTGGCCGTCGCTGAGTAACCACCGCCACTCAGTGAGAGCAGTGCTGTCCAGTCAGGTGCCACCTGAC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR TCA 72 bp | AAGCCTGAAGTGTCCTGCCAGGAGTCAGGTGGCACCTaGCTGGACAGCACTGCTCTCACTGAGTGGCGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KPEVSCQESGGT*LDSTALTEWRW Trigger: CCACCGCCACTCAGTGAGAGCAGTGCTGTCCAGTCAGGTGCCACCTGACTCCTGGCAGGACACTTCAGGCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR TCA 72 bp | TGTGAAGGCTCGGTTCTTCCCCTCCCAGAAGAGTCATaGGCACCGTCATCCGTCTCTCCCAGGCCGGAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CEGSVLPLPEES*APSSVSPRPES Trigger: GCTCTCCGGCCTGGGAGAGACGGATGACGGTGCTCATGACTCTTCTGGGAGGGGAAGAACCGAGCCTTCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | CTCCTGGGGCTGGCCCTTCCAGTTCCAGAGCAGGCTTaGGAGTTGTTGTTCCCTCTACACCAGGTCAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: LLGLALPVPEQA*ELLFPLHQVRR Trigger: GCGTCTGACCTGGTGTAGAGGGAACAACAACTCGCAAGCCTGCTCTGGAACTGGAAGGGCCAGCCCCAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGCCACTCAGGAAGTCTTaGCAGTCTGCAAAAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TKASALDGATAPASPRPQPLRKS*QSAKIL Trigger: GAGGATTTTTGCAGACTGCAAAGACTTCCTGAGTGG...CTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR TCA 72 bp | ACAGGGGCTCTGCGCATTACCACTGTCCTATGCTCCTaGAGGCTGCTCTTCACACCCTCCTGCTCCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: TGALRITTVLCS*RLLFTPSCSCS Trigger: GGAGCAGGAGCAGGAGGGTGTGAAGAGCAGCCTTCAGGAGCATAGGACAGTGGTAATGCGCAGAGCCCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | TCTGTTCGTGGGACCAGGGGCTCCTTCAAAGCCCAGTaGACTAATACCCTCCTGGGGCTGGCCCTTCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: SVRGTRGSFKAQ*TNTLLGLALPV Trigger: AACTGGAAGGGCCAGCCCCAGGAGGGTATTAGTGCACTGGGCTTTGAAGGAGCCCCTGGTCCCACGAACAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | CTGAAGTGTCCTGCCAGGAGTCAGGTGGCACCTGACTaGACAGCACTGCTCTCACTGAGTGGCGGTGGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LKCPARSQVAPD*TALLSLSGGGY Trigger: GTAACCACCGCCACTCAGTGAGAGCAGTGCTGTCCAGTCAGGTGCCACCTGACTCCTGGCAGGACACTTCAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | CCTTCAAAGCCCAGTGCACTAATACCCTCCTGGGGCTaGCCCTTCCAGTTCCAGAGCAGGCTTGCGAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSKPSALIPSWG*PFQFQSRLASC Trigger: ACAACTCGCAAGCCTGCTCTGGAACTGGAAGGGCCAGCCCCAGGAGGGTATTAGTGCACTGGGCTTTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | TGGGGGCTGCCCACGCCAGCAGGAACTTTACAGTCCTaGCCAGCGGGATCCTTCCACTGGAAATCAATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WGLPTPAGTLQS*PAGSFHWKSIE Trigger: TTCTATTGATTTCCAGTGGAAGGATCCCGCTGGGCAGGACTGTAAAGTTCCTGCTGGCGTGGGCAGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | AGGGATAGGGTGGCAAGGGCTGGGCCATTTGCAAGATaGCACTCACAAAGAGGGAGGAGACCGAGAAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: RDRVARAGPFAR*HSQRGRRPRRM Trigger: CATCCTTCTCGGTCTCCTCCCTCTTTGTGAGTGCCATCTTGCAAATGGCCCAGCCCTTGCCACCCTATCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | ACTTTCCAAATGAAATGGAAACCCCAGCACTTAGGCTaGCAGCCACCTCTGACCCCGAGGCAAGGCCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TFQMKWKPQHLG*QPPLTPRQGPQ Trigger: CTGAGGGCCTTGCCTCGGGGTCAGAGGTGGCTGCCAGCCTAAGTGCTGGGGTTTCCATTTCATTTGGAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | ACTCTAAGGCTGTCATCCATACTGTTCCCAGGAGGTTaGTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TLRLSSILFPGG*FSQAALLPVLA Trigger: GGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTATGGATGACAGCCTTAGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | TATCTTCTAACTCACAGGGAAAGCAGAGGCCGGGAATaGGATCTAGAAGGTCGTGGGCAGAAAGCCCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: YLLTHRESRGRE*DLEGRGQKAQP Trigger: AGGCTGGGCTTTCTGCCCACGACCTTCTAGATCCCATTCCCGGCCTCTGCTTTCCCTGTGAGTTAGAAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | GACACCAGGGCTCCTTTCTCCTTCACCAGTCTTGCTTaGACCTCAGTAGAGTGGCTTCCACACAGAGTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: DTRAPFSFTSLA*TSVEWLPHRVV Trigger: TACTACTCTGTGTGGAAGCCACTCTACTGAGGTGCAAGCAAGACTGGTGAAGGAGAAAGGAGCCCTGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR GCA 72 bp | GAGCAGGCTTCTAAGTTTCCCATGTCAAGCACAAGGTaGCACCAGCACAGAACTGTGTATCTTCTAACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: EQASKFPMSSTR*HQHRTVYLLTH Trigger: GTGAGTTAGAAGATACACAGTTCTGTGCTGGTGGCACCTTGTGCTTGACATGGGAAACTTAGAAGCCTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | CTTCCACACAGAGTAGTAATGACTTTCCAAATGAAATaGAAACCCCAGCACTTAGGCTGGCAGCCACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPHRVVMTFQMK*KPQHLGWQPPL Trigger: CAGAGGTGGCTGCCAGCCTAAGTGCTGGGGTTTCCATTTCATTTGGAAAGTCATTACTACTCTGTGTGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR TCA 72 bp | TCAGGAAGTCTTTGCAGTCTGCAAAAATCCTCTATCTaGTGCCTTCGAGAGCGTTCACTGGAACAGTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SGSLCSLQKSSI*CLRERSLEQCF Trigger: GAAACACTGTTCCAGTGAACGCTCTCGAAGGCATCAGATAGAGGATTTTTGCAGACTGCAAAGACTTCCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR TCA 72 bp | AGAGAAAGACAAAGAGAGAGAGAGACAGAGCCCTGCTaGGTAAATGTTGACTTAAGGCATACAGCAGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RERQRERETEPC*VNVDLRHTAAC Trigger: GCAAGCTGCTGTATGCCTTAAGTCAACATTTACTCAGCAGGGCTCTGTCTCTCTCTCTCTTTGTCTTTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CCA 72 bp | TTCTCCTTCACCAGTCTTGCTTGCACCTCAGTAGAGTaGCTTCCACACAGAGTAGTAATGACTTTCCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: FSFTSLACTSVE*LPHRVVMTFQM Trigger: CATTTGGAAAGTCATTACTACTCTGTGTGGAAGCCACTCTACTGAGGTGCAAGCAAGACTGGTGAAGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CCA 90 bp | AGGATGGGGCTCCAGGGCACCTGCAAGCTCCGGGTGCACAGTGGGGGCTGCCCAATGCCGGCGCTGCAGTaGACCACAATGGGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RMGLQGTCKLRVHSGGCPMPALQ*TTMGPC Trigger: GCATGGCCCCATTGTGGTCCACTGCAGCGCCGGCAT...TGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGGTGCCCTGGAGCCCCATCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGGGCCATGCTCCAGGCTaGGTGAGCCTGACTCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKASALDGATAPASPRPQGHAPG*VSLTLG Trigger: TCCGAGAGTCAGGCTCACTCAGCCTGGAGCATGGCC...CTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR TCA 90 bp | CTCCACCCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTGGTCGGCAGTCTGGATaGGCCCCATGCGGAACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LHPARRRSSHRGSAHYHCGRQSG*APCGTC Trigger: GCAGGTTCCGCATGGGGCTCATCCAGACTGCCGACC...ACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CAA 72 bp | CTCCATCGCAGCTCACTCTTTGGGCCGCCATGGCCATaGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHRSSLFGPPWP*WPAAQRLACRL Trigger: GAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGCCATGGCGGCCCAAAGAGTGAGCTGCGATGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CCA 90 bp | GCCATTGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCTGCTCACGCTGTGCATaGCACTTGACTGGGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIVACSAEAGMQALLLGSCSRCA*HLTGLC Trigger: GCAGAGCCCAGTCAAGTGCCATGCACAGCGTGAGCA...GCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR TCA 90 bp | CTCCACCCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTGCTGTGCATGGCACTTaGCTGGGCTCTGCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LHPARRRSSHRGSAHYHCAVHGT*LGSAFL Trigger: GAGGAAGGCAGAGCCCAGTCAAGTGCCATGCACAGC...ACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CCA 90 bp | GACCTGACGGTCATGGGTGCAGGCAGACACGGTCAGTTTCAGGGCATGCTCACGACAAGTACGCGCCGGTaGCCAGGAGCGTGGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: DLTVMGAGRHGQFQGMLTTSTRR*PGAWPC Trigger: GCATGGCCACGCTCCTGGCCACCGGCGCGTACTTGT...CGTGAGCATGCCCTGAAACTGACCGTGTCTGCCTGCACCCATGACCGTCAGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR GCA 90 bp | GGCACCTGCAAGCTCCGGGTGCACAGTGGGGGCTGCCCACGCCAGCAGGAACTTTGGAGAAGAGCTCCTTaGACTTCCCGTTGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTCKLRVHSGGCPRQQELWRRAP*TSRCEA Trigger: AGCCTCACAACGGGAAGTGCAAGGAGCTCTTCTCCA...AAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGCCCTCCTCACAACAGGATGGGGCTCCAGGGCACCTGCAAGCTCCGGGTGCTTCGCGACTTTGCATaGGAAGTCGCTGGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: GCPPHNRMGLQGTCKLRVLRDFA*EVAGFM Trigger: CATGAAGCCAGCGACTTCCCATGCAAAGTCGCGAAG...CACCCGGAGCTTGCAGGTGCCCTGGAGCCCCATCCTGTTGTGAGGAGGGCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| 3UTR CAA 72 bp | AGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCGATaGCACAAAGGCATCCGCACTGGATGGAGCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGWHAGSAAGQR*HKGIRTGWSHS Trigger: GCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAATCGCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGCCATACCAGCATGGAAGGCAGGATGTCCACGGAAGATaGGTCTTTCCTCTTGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GATAPASPRPQPYQHGRQDVHGR*VFPLVH Trigger: ATGGACAAGAGGAAAGACCCATCTTCCGTGGACATC...CTGCCTTCCATGCTGGTATGGCTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CCA 90 bp | TACTGTTCCCAGGAGGTTGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCCTCAGTGTGCGTTTGGGTaGCCGGGGAGGTGGGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: YCSQEVASHKLPCFQSWPQCAFG*PGRWGH Trigger: GTGCCCCCACCTCCCCGGCCACCCAAACGCACACTG...AGGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | CTCCACCCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTTGTGTTCCTCCTCAGTaGAGGACAGCTCTTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LHPARRRSSHRGSAHYHCCVPPQ*RTALPR Trigger: CCGAGGAAGAGCTGTCCTCCACTGAGGAGGAACACA...ACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CAA 72 bp | GGGCTGGCCCTTCCAGTTCCAGAGCAGGCTTGCGAGTaGTTGTTCCCTCTACACCAGGTCAGACGCCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLALPVPEQACE*LFPLHQVRRRR Trigger: TCTGCGGCGTCTGACCTGGTGTAGAGGGAACAACAACTCGCAAGCCTGCTCTGGAACTGGAAGGGCCAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CAA 72 bp | CCTCCTGGGGCTGGCCCTTCCAGTTCCAGAGCAGGCTaGCGAGTTGTTGTTCCCTCTACACCAGGTCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: PPGAGPSSSRAG*RVVVPSTPGQT Trigger: CGTCTGACCTGGTGTAGAGGGAACAACAACTCGCAAGCCTGCTCTGGAACTGGAAGGGCCAGCCCCAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | GGCACCTGCAAGCTCCGGGTGCACAGTGGGGGCTGCCCACGCCAGCAGGAACTTTGCTGTGGCCAATACTaGGCACATTTTAACGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTCKLRVHSGGCPRQQELCCGQY*AHFNEP Trigger: AGGCTCGTTAAAATGTGCCCAGTATTGGCCACAGCA...AAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | GACCTGACGGTCATGGGTGCAGGCAGACACGGTCAGTTTCAGGGCATGCTCACGTCGCTCACCCACTGGTaGCTGGAGAAGAGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLTVMGAGRHGQFQGMLTSLTHW*LEKSSL Trigger: CAAGGAGCTCTTCTCCAGCCACCAGTGGGTGAGCGA...CGTGAGCATGCCCTGAAACTGACCGTGTCTGCCTGCACCCATGACCGTCAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CAA 72 bp | GCCTGCCCCTCCCTTGCACTCCTCATGATGGTGGGCTaGCTACTCGGGAAGGAAGCAGAGGGTAAAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ACPSLALLMMVG*LLGKEAEGKAG Trigger: TCCTGCTTTACCCTCTGCTTCCTTCCCGAGTAGCAAGCCCACCATCATGAGGAGTGCAAGGGAGGGGCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR GCA 90 bp | TACTGTTCCCAGGAGGTTGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCCTTGTGAGGCTCCAGTGTaGGTTTGGGTGGCCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: YCSQEVASHKLPCFQSWPCEAPV*VWVAGE Trigger: CTCCCCGGCCACCCAAACGCACACTGGAGCCTCACA...AGGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGCCATACCAGCATGGAAGGCAGCTTTTCTTCTTGCTGTaGCCAATACTGGGCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: GATAPASPRPQPYQHGRQLFFLL*PILGTF Trigger: AAATGTGCCCAGTATTGGCCACAGCAAGAAGAAAAG...CTGCCTTCCATGCTGGTATGGCTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | CTCCACCCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTCCTAACTTCAGTGTCTaGACTCATGCTGCTCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LHPARRRSSHRGSAHYHCPNFSV*THAAHA Trigger: AGCGTGAGCAGCATGAGTCCAGACACTGAAGTTAGG...ACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | CCTGCAAGCTCCGGGTGCACAGTGGGGGCTGCCCACGCCAGCAGGAACTTTACACAAAGTCAGGCCATGTaGTGTAGTGGAAATGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PASSGCTVGAAHASRNFTQSQAM*CSGNAG Trigger: TCCTGCATTTCCACTACACCACATGGCCTGACTTTG...TGTAAAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR TCA 90 bp | GGCTCTGCGCATTACCACTGTCCTATGCTCCTGAAGGCTGCTCTTCACACCCTCAGGAAGGGCTTCCAGTaGCTTGGCCAATGTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSAHYHCPMLLKAALHTLRKGFQ*LGQCAL Trigger: CAAGGCACATTGGCCAAGTCACTGGAAGCCCTTCCT...GAGGGTGTGAAGAGCAGCCTTCAGGAGCATAGGACAGTGGTAATGCGCAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | GGCTGCCCTCCTCACAACAGGATGGGGCTCCAGGGCACCTGCAAGCTCCGGGTGAATTTAATCCGACTGTaGTCAAAAGGGCTGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GCPPHNRMGLQGTCKLRVNLIRL*SKGLTS Trigger: AGATGTCAGCCCTTTTGACCACAGTCGGATTAAATT...CACCCGGAGCTTGCAGGTGCCCTGGAGCCCCATCCTGTTGTGAGGAGGGCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | TCCCATGTCAAGCACAAGGTGCCACCAGCACAGAACTGTGTATCTTCTAACTCAGCTCCAGTGTGCGTTTaGGTGGCCGGGGAGGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHVKHKVPPAQNCVSSNSAPVCV*VAGEVG Trigger: CCCCACCTCCCCGGCCACCCAAACGCACACTGGAGC...TGAGTTAGAAGATACACAGTTCTGTGCTGGTGGCACCTTGTGCTTGACATGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | AAGGCCCTGAGATTAGACTCTGTTCGTGGGACCAGGGGCTCCTTCAAAGCCCAGTCACCCACTGGTGGCTaGAGAAGAGCTCCTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KALRLDSVRGTRGSFKAQSPTGG*RRAPCT Trigger: AGTGCAAGGAGCTCTTCTCCAGCCACCAGTGGGTGA...CTGGGCTTTGAAGGAGCCCCTGGTCCCACGAACAGAGTCTAATCTCAGGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR TCA 90 bp | AAAAAGCCACCCAATGTGAAGGCTCGGTTCTTCCCCTCCCAGAAGAGTCATGAGACTTGGCGCCCTCGATaGCAGCCAGGTAGGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKPPNVKARFFPSQKSHETWRPR*QPGRRS Trigger: GCTTCTCCTACCTGGCTGTCATCGAGGGCGCCAAGT...CTCATGACTCTTCTGGGAGGGGAAGAACCGAGCCTTCACATTGGGTGGCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | CCAGCAGGAACTTTACAGTCCTGCCCAGCGGGATCCTTCCACTGGAAATCAATAAGCTGGTCGGCAGTCTaGATGAGCCCCATGCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAGTLQSCPAGSFHWKSISWSAV*MSPMRN Trigger: GTTCCGCATGGGGCTCATCCAGACTGCCGACCAGCT...TATTGATTTCCAGTGGAAGGATCCCGCTGGGCAGGACTGTAAAGTTCCTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CCA 90 bp | TCTAAGGCTACTGTACACACCACACTACTCCAGACACAGCCCACTGCTAACTGCTCCTCGCTCACCCACTaGTGGCTGGAGAAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKATVHTTLLQTQPTANCSSLTH*WLEKSS Trigger: GGAGCTCTTCTCCAGCCACCAGTGGGTGAGCGAGGA...GCAGTTAGCAGTGGGCTGTGTCTGGAGTAGTGTGGTGTGTACAGTAGCCTTAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | TACTGTTCCCAGGAGGTTGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCCTTGCATGGCACTTGACTaGGCTCTGCCTTCCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YCSQEVASHKLPCFQSWPCMALD*ALPSSL Trigger: CAGAGAGGAAGGCAGAGCCCAGTCAAGTGCCATGCA...AGGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CAA 72 bp | GGATTTACAGGGATAGGGTGGCAAGGGCTGGGCCATTaGCAAGATGGCACTCACAAAGAGGGAGGAGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GFTGIGWQGLGH*QDGTHKEGGDR Trigger: TCGGTCTCCTCCCTCTTTGTGAGTGCCATCTTGCAAATGGCCCAGCCCTTGCCACCCTATCCCTGTAAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| 3UTR CAA 72 bp | GACTCTAAGGCTGTCATCCATACTGTTCCCAGGAGGTaGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DSKAVIHTVPRR*LLTSCLASSPG Trigger: GCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTATGGATGACAGCCTTAGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR TCA 90 bp | AAAAAGCCACCCAATGTGAAGGCTCGGTTCTTCCCCTCCCAGAAGAGTCATGAGTGGCCATGCACACATTaGCCAGGAAGGGCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KKPPNVKARFFPSQKSHEWPCTH*PGRASS Trigger: ACTGGAAGCCCTTCCTGGTCAATGTGTGCATGGCCA...CTCATGACTCTTCTGGGAGGGGAAGAACCGAGCCTTCACATTGGGTGGCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CCA 90 bp | GGCTTCCATGACACCAGGGCTCCTTTCTCCTTCACCAGTCTTGCTTGCACCTCATGCATGGGAAGTCGCTaGCTTCATGTCGAATGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFHDTRAPFSFTSLACTSCMGSR*LHVECP Trigger: AGGACATTCGACATGAAGCCAGCGACTTCCCATGCA...TGAGGTGCAAGCAAGACTGGTGAAGGAGAAAGGAGCCCTGGTGTCATGGAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR GCA 90 bp | CTACTGTACACACCACACTACTCCAGACACAGCCCACTGCTAACTGCTCCCAGCTCATTATCTTCCTGGTaGAATTTAATCCGACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLYTPHYSRHSPLLTAPSSLSSW*NLIRLW Trigger: CCACAGTCGGATTAAATTGCACCAGGAAGATAATGA...GCTGGGAGCAGTTAGCAGTGGGCTGTGTCTGGAGTAGTGTGGTGTGTACAGTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR GCA 90 bp | AAAAAGCCACCCAATGTGAAGGCTCGGTTCTTCCCCTCCCAGAAGAGTCATGAGATCTCCTTTTCTTCTTaGTGTGGCCAATACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KKPPNVKARFFPSQKSHEISFSS*CGQYWA Trigger: TGCCCAGTATTGGCCACAGCAAGAAGAAAAGGAGAT...CTCATGACTCTTCTGGGAGGGGAAGAACCGAGCCTTCACATTGGGTGGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | CCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTCCTATGGGCTCCAGTGTGCGTTaGGGTGGCCGGGGAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PARRRSSHRGSAHYHCPMGSSVR*GGRGGG Trigger: CCCACCTCCCCGGCCACCCAAACGCACACTGGAGCC...CATAGGACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS TCA 90 bp | CTCACCCACTGGTGGCTGGAGAAGAGCTCCTTGCACTTCCCGTTGTaGGGCTCCAGTGTGCGTTTGGGTGGCCGGGGAGGTGGGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LTHWWLEKSSLHFPL*GSSVRLGGRGGGGT Trigger: CGTGCCCCCACCTCCCCGGCCACCCAAACGCACACTGGAGCCTCACAACGGGAAGTGCAAGGAGCTCTTCTCCAGCCACCAGTGGGTGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS GCA 90 bp | CACAGGTCTCCTCGCTCACCCACTGGTGGCTGGAGAAGAGCTCCTTaGACTTCCCGTTGTGAGGCTCCAGTGTGCGTTTGGGTGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: HRSPRSPTGGWRRAP*TSRCEAPVCVWVAG Trigger: CCCGGCCACCCAAACGCACACTGGAGCCTCACAACGGGAAGTGCAAGGAGCTCTTCTCCAGCCACCAGTGGGTGAGCGAGGAGACCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | CCTGCAAGCTCCGGGTGCACAGTGGGGGCTGCCCACGCCAGCAGGAACTTTACAGGAAGCTTCGCGACTTaGCATGGGAAGTCGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PASSGCTVGAAHASRNFTGSFAT*HGKSLA Trigger: AGCCAGCGACTTCCCATGCAAAGTCGCGAAGCTTCC...TGTAAAGTTCCTGCTGGCGTGGGCAGCCCCCACTGTGCACCCGGAGCTTGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | ATTGCACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCCCCACGGCAGACGCCTGAGCACTTaGAAGACCTCCACCCACCAT | + |
|
Preference number: 5 (lower is better) Translates to: IAQRHPHWMEPQRRPPHGRRLST*KTSTHH Trigger: ATGGTGGGTGGAGGTCTTCAAAGTGCTCAGGCGTCT...GCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGTGCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | CTCCACCCTGCACGTCGCAGGAGCAGCCACAGGGGCTCTGCGCATTACCACTGTGTGGCCATGCACACATaGACCAGGAAGGGCTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LHPARRRSSHRGSAHYHCVAMHT*TRKGFQ Trigger: CTGGAAGCCCTTCCTGGTCAATGTGTGCATGGCCAC...ACAGTGGTAATGCGCAGAGCCCCTGTGGCTGCTCCTGCGACGTGCAGGGTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGGCATCCGCACTGGATGGAGCCACAGCGCCGGCCTCCCCACGGCCTCAGCATCTCCTTTTCTTCTaGCTGTGGCCAATACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TKASALDGATAPASPRPQHLLFF*LWPILG Trigger: GCCCAGTATTGGCCACAGCAAGAAGAAAAGGAGATG...CTGAGGCCGTGGGGAGGCCGGCGCTGTGGCTCCATCCAGTGCGGATGCCTTTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | GCCATTGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCGATGGGTCTTTCCTCTaGTCCATCAGTAAGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AIVACSAEAGMQALLLGSDGSFL*SISKRQ Trigger: CTGCCTCTTACTGATGGACAAGAGGAAAGACCCATC...GCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS GCA 90 bp | CTGGACTCATGCTGCTCACGCTGTGCATGGCACTTGACTGGGCTCTaGCTTCCTCTCTGGCCAGGCTGTCTTCATCCCCACAGGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LDSCCSRCAWHLTGL*LPLWPGCLHPHRSP Trigger: AGGAGACCTGTGGGGATGAAGACAGCCTGGCCAGAGAGGAAGGCAGAGCCCAGTCAAGTGCCATGCACAGCGTGAGCAGCATGAGTCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS TCA 90 bp | GCCAGGAGCGTGGCCATGCACACATTGACCAGGAAGGGCTTCCAGTaGCTTGGCCAATGTGCCTTGTGTTCCTCCTCAGTGGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARSVAMHTLTRKGFQ*LGQCALCSSSVEDS Trigger: GCTGTCCTCCACTGAGGAGGAACACAAGGCACATTGGCCAAGTCACTGGAAGCCCTTCCTGGTCAATGTGTGCATGGCCACGCTCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CCA 90 bp | TCAGTGTCTGGACTCATGCTGCTCACGCTGTGCATGGCACTTGACTaGGCTCTGCCTTCCTCTCTGGCCAGGCTGTCTTCATCCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SVSGLMLLTLCMALD*ALPSSLARLSSSPQ Trigger: CTGTGGGGATGAAGACAGCCTGGCCAGAGAGGAAGGCAGAGCCCAGTCAAGTGCCATGCACAGCGTGAGCAGCATGAGTCCAGACACTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | GCCATTGTGGCCTGCAGCGCAGAGGCTGGCATGCAGGCTCTGCTGCTGGGCAGCACTTTGAAAAGGAAATaGAGGAAAGAAGCCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: AIVACSAEAGMQALLLGSTLKRK*RKEAGD Trigger: GTCACCGGCTTCTTTCCTCAATTTCCTTTTCAAAGT...GCTGCCCAGCAGCAGAGCCTGCATGCCAGCCTCTGCGCTGCAGGCCACAATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | TTTGCAAGATGGCACTCACAAAGAGGGAGGAGACCGAGAAGGATGGAACCGCGGCGCTGTGCATGGCACTaGACTGGGCTCTGCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FARWHSQRGRRPRRMEPRRCAWH*TGLCLP Trigger: AGGAAGGCAGAGCCCAGTCAAGTGCCATGCACAGCG...CCGCGGTTCCATCCTTCTCGGTCTCCTCCCTCTTTGTGAGTGCCATCTTGCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | CCAAATGAAATGGAAACCCCAGCACTTAGGCTGGCAGCCACCTCTGACCCCGAGCTTGGCCAATGTGCCTaGTGTTCCTCCTCAGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PNEMETPALRLAATSDPELGQCA*CSSSVE Trigger: CTCCACTGAGGAGGAACACAAGGCACATTGGCCAAG...CTCGGGGTCAGAGGTGGCTGCCAGCCTAAGTGCTGGGGTTTCCATTTCATTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | CCAGCAGGAACTTTACAGTCCTGCCCAGCGGGATCCTTCCACTGGAAATCAATATCGCCCATGATGAACTaGGCGCCCTCGATGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAGTLQSCPAGSFHWKSISPMMN*APSMTA Trigger: GGCTGTCATCGAGGGCGCCAAGTTCATCATGGGCGA...TATTGATTTCCAGTGGAAGGATCCCGCTGGGCAGGACTGTAAAGTTCCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCCCTGAGATTAGACTCTGTTCGTGGGACCAGGGGCTCCTTCAAAGCCCAGATCTCTCGAGTCTCCTaGGTAGTCAGGTTTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: KALRLDSVRGTRGSFKAQISRVS*VVRFSN Trigger: GTTGGAAAACCTGACTACCAAGGAGACTCGAGAGAT...CTGGGCTTTGAAGGAGCCCCTGGTCCCACGAACAGAGTCTAATCTCAGGGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS-3UTR CAA 90 bp | TACTGTTCCCAGGAGGTTGCTTCTCACAAGCTGCCTTGCTTCCAGTCCTGGCCTTACCTGTTCCGGTTTTaGTTCTTAGGAAGCTTCGCG | + |
|
Preference number: 5 (lower is better) Translates to: YCSQEVASHKLPCFQSWPYLFRF*FLGSFA Trigger: CGCGAAGCTTCCTAAGAACAAAAACCGGAACAGGTA...AGGCCAGGACTGGAAGCAAGGCAGCTTGTGAGAAGCAACCTCCTGGGAACAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CCA 90 bp | GTACCTGTTCCGGTTTTTGTTCTTAGGAAGCTTCGCGACTTTGCATaGGAAGTCGCTGGCTTCATGTCGAATGTCCTGGTAAATAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: VPVPVFVLRKLRDFA*EVAGFMSNVLVNSR Trigger: GCGGCTATTTACCAGGACATTCGACATGAAGCCAGCGACTTCCCATGCAAAGTCGCGAAGCTTCCTAAGAACAAAAACCGGAACAGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS-3UTR CAA 90 bp | CTACTGTACACACCACACTACTCCAGACACAGCCCACTGCTAACTGCTCCCAGCCCTGACTCTCGGACTTaGAAAAGGAAATTGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLYTPHYSRHSPLLTAPSPDSRT*KRKLRK Trigger: TTTCCTCAATTTCCTTTTCAAAGTCCGAGAGTCAGG...GCTGGGAGCAGTTAGCAGTGGGCTGTGTCTGGAGTAGTGTGGTGTGTACAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS GCA 90 bp | GTCAACTTCAAACCTGTGTCATCAAAGACCATCTCCTTTTCTTCTTaGTGTGGCCAATACTGGGCACATTTTAACGAGCCTTTCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VNFKPVSSKTISFSS*CGQYWAHFNEPFSM Trigger: CATGGAGAAAGGCTCGTTAAAATGTGCCCAGTATTGGCCACAGCAAGAAGAAAAGGAGATGGTCTTTGATGACACAGGTTTGAAGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS GCA 72 bp | AGAGCTCCTTGCACTTCCCGTTGTGAGGCTCCAGTGTaGGTTTGGGTGGCCGGGGAGGTGGGGGCACGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RAPCTSRCEAPV*VWVAGEVGARA Trigger: AGCACGTGCCCCCACCTCCCCGGCCACCCAAACGCACACTGGAGCCTCACAACGGGAAGTGCAAGGAGCTCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS CCA 72 bp | CAGAAGGTCCCTGACCTCCCGATGCCGGCGCTGCAGTaGACCACAATGGGGCCATGCTCCAGGCTGAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: QKVPDLPMPALQ*TTMGPCSRLSE Trigger: CTCACTCAGCCTGGAGCATGGCCCCATTGTGGTCCACTGCAGCGCCGGCATCGGGAGGTCAGGGACCTTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
||
| CDS TCA 72 bp | CCAGGTAGGAGAAGCGCAGCTGGTCGGCAGTCTGGATaGGCCCCATGCGGAACCTGCGCATCTCCAGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: PGRRSAAGRQSG*APCGTCASPAV Trigger: TACTGCTGGAGATGCGCAGGTTCCGCATGGGGCTCATCCAGACTGCCGACCAGCTGCGCTTCTCCTACCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS TCA 72 bp | TGGTGGCTGGAGAAGAGCTCCTTGCACTTCCCGTTGTaGGGCTCCAGTGTGCGTTTGGGTGGCCGGGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: WWLEKSSLHFPL*GSSVRLGGRGG Trigger: ACCTCCCCGGCCACCCAAACGCACACTGGAGCCTCACAACGGGAAGTGCAAGGAGCTCTTCTCCAGCCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS GCA 72 bp | CCTCGCTCACCCACTGGTGGCTGGAGAAGAGCTCCTTaGACTTCCCGTTGTGAGGCTCCAGTGTGCGTTTGG | + |
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Preference number: 6 (lower is better) Translates to: PRSPTGGWRRAP*TSRCEAPVCVW Trigger: CCAAACGCACACTGGAGCCTCACAACGGGAAGTGCAAGGAGCTCTTCTCCAGCCACCAGTGGGTGAGCGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CCA 72 bp | GGACTCATGCTGCTCACGCTGTGCATGGCACTTGACTaGGCTCTGCCTTCCTCTCTGGCCAGGCTGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GLMLLTLCMALD*ALPSSLARLSS Trigger: TGAAGACAGCCTGGCCAGAGAGGAAGGCAGAGCCCAGTCAAGTGCCATGCACAGCGTGAGCAGCATGAGTCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CAA 90 bp | AGTGGAGGACAGCTCTTCCTCGGTGGGGACAGACGCCTGAGCACTTaGAAGACCTCCACCCACCATCCGTCTCCTAACTTCAGTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SGGQLFLGGDRRLST*KTSTHHPSPNFSVW Trigger: CCAGACACTGAAGTTAGGAGACGGATGGTGGGTGGAGGTCTTCAAAGTGCTCAGGCGTCTGTCCCCACCGAGGAAGAGCTGTCCTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CCA 72 bp | TGTGTTCCTCCTCAGTGGAGGACAGCTCTTCCTCGGTaGGGACAGACGCCTGAGCACTTTGAAGACCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: CVPPQWRTALPR*GQTPEHFEDLH Trigger: GTGGAGGTCTTCAAAGTGCTCAGGCGTCTGTCCCCACCGAGGAAGAGCTGTCCTCCACTGAGGAGGAACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CAA 72 bp | CAGCTCTTCCTCGGTGGGGACAGACGCCTGAGCACTTaGAAGACCTCCACCCACCATCCGTCTCCTAACTTC | + |
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Preference number: 6 (lower is better) Translates to: QLFLGGDRRLST*KTSTHHPSPNF Trigger: GAAGTTAGGAGACGGATGGTGGGTGGAGGTCTTCAAAGTGCTCAGGCGTCTGTCCCCACCGAGGAAGAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS TCA 72 bp | GGAAGGTCTAGATCCTCCCGGGAGAGCTCCTTCCACTaGTCCTGCACTGACGAGTCGCCCATGATGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: GRSRSSRESSFH*SCTDESPMMNL Trigger: CAAGTTCATCATGGGCGACTCGTCAGTGCAGGATCAGTGGAAGGAGCTCTCCCGGGAGGATCTAGACCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS TCA 72 bp | GTGGCCATGCACACATTGACCAGGAAGGGCTTCCAGTaGCTTGGCCAATGTGCCTTGTGTTCCTCCTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VAMHTLTRKGFQ*LGQCALCSSSV Trigger: CACTGAGGAGGAACACAAGGCACATTGGCCAAGTCACTGGAAGCCCTTCCTGGTCAATGTGTGCATGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CAA 72 bp | CCCATGCGGAACCTGCGCATCTCCAGCAGTACTTTCTaGATGTCCACGGAAGATGGGTCTTTCCTCTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: PMRNLRISSSTF*MSTEDGSFLLS Trigger: GGACAAGAGGAAAGACCCATCTTCCGTGGACATCAAGAAAGTACTGCTGGAGATGCGCAGGTTCCGCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS TCA 72 bp | CCATGCGGAACCTGCGCATCTCCAGCAGTACTTTCTTaGTGTCCACGGAAGATGGGTCTTTCCTCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PCGTCASPAVLS*CPRKMGLSSCP Trigger: TGGACAAGAGGAAAGACCCATCTTCCGTGGACATCAAGAAAGTACTGCTGGAGATGCGCAGGTTCCGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CAA 90 bp | CGACTGTGGTCAAAAGGGCTGACATCTCGGTACCTGTTCCGGTTTTaGTTCTTAGGAAGCTTCGCGACTTTGCATGGGAAGTCGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RLWSKGLTSRYLFRF*FLGSFATLHGKSLA Trigger: AGCCAGCGACTTCCCATGCAAAGTCGCGAAGCTTCCTAAGAACAAAAACCGGAACAGGTACCGAGATGTCAGCCCTTTTGACCACAGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CAA 90 bp | TGGATGAGCCCCATGCGGAACCTGCGCATCTCCAGCAGTACTTTCTaGATGTCCACGGAAGATGGGTCTTTCCTCTTGTCCATCAGTAAG | + |
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Preference number: 6 (lower is better) Translates to: WMSPMRNLRISSSTF*MSTEDGSFLLSISK Trigger: CTTACTGATGGACAAGAGGAAAGACCCATCTTCCGTGGACATCAAGAAAGTACTGCTGGAGATGCGCAGGTTCCGCATGGGGCTCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CCA 72 bp | CCGGTTTTTGTTCTTAGGAAGCTTCGCGACTTTGCATaGGAAGTCGCTGGCTTCATGTCGAATGTCCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: PVFVLRKLRDFA*EVAGFMSNVLV Trigger: TACCAGGACATTCGACATGAAGCCAGCGACTTCCCATGCAAAGTCGCGAAGCTTCCTAAGAACAAAAACCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CAA 72 bp | CTGTTCCGGTTTTTGTTCTTAGGAAGCTTCGCGACTTaGCATGGGAAGTCGCTGGCTTCATGTCGAATGTCC | + |
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Preference number: 6 (lower is better) Translates to: LFRFLFLGSFAT*HGKSLASCRMS Trigger: GGACATTCGACATGAAGCCAGCGACTTCCCATGCAAAGTCGCGAAGCTTCCTAAGAACAAAAACCGGAACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CAA 72 bp | TCAAAAGGGCTGACATCTCGGTACCTGTTCCGGTTTTaGTTCTTAGGAAGCTTCGCGACTTTGCATGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: SKGLTSRYLFRF*FLGSFATLHGK Trigger: CTTCCCATGCAAAGTCGCGAAGCTTCCTAAGAACAAAAACCGGAACAGGTACCGAGATGTCAGCCCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS CCA 72 bp | AAGACCATCTCCTTTTCTTCTTGCTGTGGCCAATACTaGGCACATTTTAACGAGCCTTTCTCCATGATGCGG | + |
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Preference number: 6 (lower is better) Translates to: KTISFSSCCGQY*AHFNEPFSMMR Trigger: CCGCATCATGGAGAAAGGCTCGTTAAAATGTGCCCAGTATTGGCCACAGCAAGAAGAAAAGGAGATGGTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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| CDS GCA 72 bp | AAACCTGTGTCATCAAAGACCATCTCCTTTTCTTCTTaGTGTGGCCAATACTGGGCACATTTTAACGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: KPVSSKTISFSS*CGQYWAHFNEP Trigger: AGGCTCGTTAAAATGTGCCCAGTATTGGCCACAGCAAGAAGAAAAGGAGATGGTCTTTGATGACACAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029053.8 |
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