Pregenerated sensors for PTPMT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063235Ensembl transcript IDs: ENSMUST00000111461.13, ENSMUST00000125001.11
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTaGGAGTGGTGTGCTCCTTTGCCCCGCGACCGCCTCCAGCACACC | + |
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Preference number: 1 (lower is better) Translates to: SIPRRMWKCNNATVD*EWCAPLPRDRLQHT Trigger: GGTGTGCTGGAGGCGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTGGGATGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | TCCTTTGCCCCGCGACCGCCTCCAGCACACCCTAGTATCTGTGCCTaGGAAAGATGCCATATATTCCCTGGGCGGCAAGACACTACAGGA | + |
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Preference number: 1 (lower is better) Translates to: SFAPRPPPAHPSICA*ERCHIFPGRQDTTG Trigger: TCCTGTAGTGTCTTGCCGCCCAGGGAATATATGGCATCTTTCCCAGGCACAGATACTAGGGTGTGCTGGAGGCGGTCGCGGGGCAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | CCACGACGCATGTGGAAATGTAACAATGCCACTGTTGACTGGGAGTaGTGTGCTCCTTTGCCCCGCGACCGCCTCCAGCACACCCTAGTA | + |
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Preference number: 1 (lower is better) Translates to: PRRMWKCNNATVDWE*CAPLPRDRLQHTLV Trigger: TACTAGGGTGTGCTGGAGGCGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | CACTGGCCCAGTGCCTGGTACTTGAGAGCAAACTGGACTCCTTTGTaGAGATTGGCCAAGGTTGGGACCCCAGTCATGTCGACTGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: HWPSAWYLRANWTPL*RLAKVGTPVMSTVL Trigger: CAGCACAGTCGACATGACTGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | GGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCACGACGCATGTaGAAATGTAACAATGCCACTGTTGACTGGGAGTGGTGTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GGDLYVVGGSIPRRM*KCNNATVDWEWCAP Trigger: AGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTGGGATGGACCCTCCTACCACATACAGGTCGCCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR TCA 90 bp | GAACTCTTTGAGAACTTCCAGCTGGCTGGGCCTGATGGAGATGTGTaGCCGGATTTTGGCGATCGCTTCTATAGCCTCCTCTGGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: ELFENFQLAGPDGDV*PDFGDRFYSLLWAP Trigger: TGGAGCCCAGAGGAGGCTATAGAAGCGATCGCCAAAATCCGGTCACACATCTCCATCAGGCCCAGCCAGCTGGAAGTTCTCAAAGAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | AAACCTTCCCGACTGATCCAGTGCTTTGACACAGAAACTGACAAGTaGCACGTGAAGCCCTACGTACTGCCCTTTGCAGGCCGCATGCAC | + |
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Preference number: 1 (lower is better) Translates to: KPSRLIQCFDTETDK*HVKPYVLPFAGRMH Trigger: GTGCATGCGGCCTGCAAAGGGCAGTACGTAGGGCTTCACGTGGCACTTGTCAGTTTCTGTGTCAAAGCACTGGATCAGTCGGGAAGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR TCA 90 bp | TGTGGAGATTGGCCAAGGTTGGGACCCCAGTCATGTCGACTGTGCTaGGCCGTAGCTGCTCAACTCCTGCTTTCTTCCATTCCTGTAATC | + |
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Preference number: 1 (lower is better) Translates to: CGDWPRLGPQSCRLC*AVAAQLLLSSIPVI Trigger: GATTACAGGAATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCTCAGCACAGTCGACATGACTGGGGTCCCAACCTTGGCCAATCTCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR TCA 90 bp | GGCTCATGGGATGCTCTGTGTAGGGCTTTTCACACTGCTGCTGCTTaGACTCTGCCATTATCCCCTGTGATCCTGTGCCTCACTTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: GSWDALCRAFHTAAA*TLPLSPVILCLTSD Trigger: GTCTGAAGTGAGGCACAGGATCACAGGGGATAATGGCAGAGTTCAAGCAGCAGCAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | GCCAAGGTTGGGACCCCAGTCATGTCGACTGTGCTGAGCCGTAGCTaGTCAACTCCTGCTTTCTTCCATTCCTGTAATCTCAGTACTTGG | + |
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Preference number: 1 (lower is better) Translates to: AKVGTPVMSTVLSRS*STPAFFHSCNLSTW Trigger: CCAAGTACTGAGATTACAGGAATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCTCAGCACAGTCGACATGACTGGGGTCCCAACCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | AGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTaGAAGCATGGTGGCGACCTGTATGTGGTAGGAGGGTCCATCCCA | + |
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Preference number: 1 (lower is better) Translates to: SVSGQNSLCHQITAA*KHGGDLYVVGGSIP Trigger: TGGGATGGACCCTCCTACCACATACAGGTCGCCACCATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | CTCCATCAGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTaGAGCCTGCAAGCATGGTGGCGACCTGTATGTGGTAGGAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LHQCKWPKQLMPPNH*SLQAWWRPVCGRRV Trigger: GACCCTCCTACCACATACAGGTCGCCACCATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACTGATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR TCA 90 bp | CAGCCTTACAATGCACATAGACACACTGGCCCAGTGCCTGGTACTTaGGAGCAAACTGGACTCCTTTGTGGAGATTGGCCAAGGTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QPYNAHRHTGPVPGT*EQTGLLCGDWPRLG Trigger: TCCCAACCTTGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTGTGTCTATGTGCATTGTAAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | TCTGGATCGACCAGCCTTACAATGCACATAGACACACTGGCCCAGTaGCTGGTACTTGAGAGCAAACTGGACTCCTTTGTGGAGATTGGC | + |
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Preference number: 1 (lower is better) Translates to: SGSTSLTMHIDTLAQ*LVLESKLDSFVEIG Trigger: GCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTGTGTCTATGTGCATTGTAAGGCTGGTCGATCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | AGTTGTGTACCTGAATCAGATAGGCTGCCACCATTGTGGCACTTCTaGATCGACCAGCCTTACAATGCACATAGACACACTGGCCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: SCVPESDRLPPLWHF*IDQPYNAHRHTGPV Trigger: CACTGGGCCAGTGTGTCTATGTGCATTGTAAGGCTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATCTGATTCAGGTACACAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | CTGGGCTCCAGTTGTGTACCTGAATCAGATAGGCTGCCACCATTGTaGCACTTCTGGATCGACCAGCCTTACAATGCACATAGACACACT | + |
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Preference number: 1 (lower is better) Translates to: LGSSCVPESDRLPPL*HFWIDQPYNAHRHT Trigger: AGTGTGTCTATGTGCATTGTAAGGCTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATCTGATTCAGGTACACAACTGGAGCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | CCCAGTCAAATCGGTAATCCCCCAGTTCAGAGAAATGTGTTAGTTTaGGCATATGTGAGAAAGGCAGCGCCTCAACCCATCCCCAAGGCT | + |
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Preference number: 1 (lower is better) Translates to: PSQIGNPPVQRNVLV*AYVRKAAPQPIPKA Trigger: AGCCTTGGGGATGGGTTGAGGCGCTGCCTTTCTCACATATGCCCAAACTAACACATTTCTCTGAACTGGGGGATTACCGATTTGACTGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | ACCCTCTCGAATGCAGTTATCTACTATCGGGTAGGTGATAACGTGTaGACAGAGACAACTCAGTTAGAGGTGGCTGTGTCTGGGGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: TLSNAVIYYRVGDNV*TETTQLEVAVSGAA Trigger: AGCAGCCCCAGACACAGCCACCTCTAACTGAGTTGTCTCTGTCCACACGTTATCACCTACCCGATAGTAGATAACTGCATTCGAGAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR TCA 90 bp | ATCCCGCACGCACTCATTGGCTGTGTCCTTGCACTGTGCAGAAGATaGCTCCATCAGTGTAAGTGGCCAAAACAGCTTATGCCACCAAAT | + |
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Preference number: 1 (lower is better) Translates to: IPHALIGCVLALCRR*LHQCKWPKQLMPPN Trigger: ATTTGGTGGCATAAGCTGTTTTGGCCACTTACACTGATGGAGTCATCTTCTGCACAGTGCAAGGACACAGCCAATGAGTGCGTGCGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | CATAAGGATCTGGTGTTTATTGTGGCTGAGGGGGACTCTCTAGTGTaGTATAATCCCCTTCTAGACAGCTTCACCCGGCTCTGTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: HKDLVFIVAEGDSLV*YNPLLDSFTRLCLP Trigger: AGGAAGACAGAGCCGGGTGAAGCTGTCTAGAAGGGGATTATAGCACACTAGAGAGTCCCCCTCAGCCACAATAAACACCAGATCCTTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | TGTGCAGAAGATGACTCCATCAGTGTAAGTGGCCAAAACAGCTTATaGCACCAAATCACTGCAGCCTGCAAGCATGGTGGCGACCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: CAEDDSISVSGQNSL*HQITAACKHGGDLY Trigger: ATACAGGTCGCCACCATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACTGATGGAGTCATCTTCTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | TCACAAGAGGCATTAAGGTGCTGCTTACCAACTTGCAGTTTGTGTTaGCCTAAAACAGTGATGAGAAGAACAGCTGACTCCTTTGCCCTC | + |
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Preference number: 1 (lower is better) Translates to: SQEALRCCLPTCSLC*PKTVMRRTADSFAL Trigger: GAGGGCAAAGGAGTCAGCTGTTCTTCTCATCACTGTTTTAGGCCAACACAAACTGCAAGTTGGTAAGCAGCACCTTAATGCCTCTTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CCA 90 bp | TTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTaGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGATTCTG | + |
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Preference number: 1 (lower is better) Translates to: FLDLLGTKLGPYYTC*ASTLPSHTIKIWIL Trigger: CAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| 3UTR GCA 90 bp | TTATTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATaGTGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGATT | + |
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Preference number: 1 (lower is better) Translates to: LFLDLLGTKLGPYYT*WASTLPSHTIKIWI Trigger: AATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | GAGGGTCCATCCCACGACGCATGTGGAAATGTAACAATGCCACTGTaGACTGGGAGTGGTGTGCTCCTTTGCCCCGCGACCGCCTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: EGPSHDACGNVTMPL*TGSGVLLCPATASS Trigger: GCTGGAGGCGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTGGGATGGACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | TGGAAATGTAACAATGCCACTGTTGACTGGGAGTGGTGTGCTCCTTaGCCCCGCGACCGCCTCCAGCACACCCTAGTATCTGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: WKCNNATVDWEWCAP*PRDRLQHTLVSVPG Trigger: CCCAGGCACAGATACTAGGGTGTGCTGGAGGCGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | CCCAGTGCCTGGTACTTGAGAGCAAACTGGACTCCTTTGTGGAGATaGGCCAAGGTTGGGACCCCAGTCATGTCGACTGTGCTGAGCCGT | + |
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Preference number: 2 (lower is better) Translates to: PSAWYLRANWTPLWR*AKVGTPVMSTVLSR Trigger: ACGGCTCAGCACAGTCGACATGACTGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR TCA 90 bp | AGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATCCGGCTCTGTCTTCCTaGGGCCTGGAGCTCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SVSGQNSLCHQITAACKHPALSS*GLELCP Trigger: GGGGCAGAGCTCCAGGCCTCAGGAAGACAGAGCCGG...ATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | ACACACTGGCCCAGTGCCTGGTACTTGAGAGCAAACTGGACTCCTTaGTGGAGATTGGCCAAGGTTGGGACCCCAGTCATGTCGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: THWPSAWYLRANWTP*WRLAKVGTPVMSTV Trigger: CACAGTCGACATGACTGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | AGAACTTCCAGCTGGCTGGGCCTGATGGAGATGTGTGACCGGATTTaGGCGATCGCTTCTATAGCCTCCTCTGGGCTCCAGTTGTGTACC | + |
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Preference number: 2 (lower is better) Translates to: RTSSWLGLMEMCDRI*AIASIASSGLQLCT Trigger: GGTACACAACTGGAGCCCAGAGGAGGCTATAGAAGCGATCGCCAAAATCCGGTCACACATCTCCATCAGGCCCAGCCAGCTGGAAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | TCTGTCTTCCTGAGGCCTGGAGCTCTGCCCCATCCCTCTGGAAGATaGCCAGCTGTAATGGCAGCATCTACGTCTTCAGGGATCGATATA | + |
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Preference number: 2 (lower is better) Translates to: SVFLRPGALPHPSGR*PAVMAASTSSGIDI Trigger: TATATCGATCCCTGAAGACGTAGATGCTGCCATTACAGCTGGCAATCTTCCAGAGGGATGGGGCAGAGCTCCAGGCCTCAGGAAGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | CCTCTGGGCTCCAGTTGTGTACCTGAATCAGATAGGCTGCCACCATaGTGGCACTTCTGGATCGACCAGCCTTACAATGCACATAGACAC | + |
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Preference number: 2 (lower is better) Translates to: PLGSSCVPESDRLPP*WHFWIDQPYNAHRH Trigger: GTGTCTATGTGCATTGTAAGGCTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATCTGATTCAGGTACACAACTGGAGCCCAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR TCA 90 bp | TTTATTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCCCAGCTGGCTGGGCCTaGTGGAGATGTGTGACCGGA | + |
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Preference number: 2 (lower is better) Translates to: FIFGPARDQIGALLYMLGPAGWA*WRCVTG Trigger: TCCGGTCACACATCTCCATCAGGCCCAGCCAGCTGG...GCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAATAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR GCA 90 bp | GATCTGGTGTTTATTGTGGCTGAGGGGGACTCTCTAGTGTGCTATAATCCCCTTGCACCTTGGCTCCCATaGAGGAAGACAGAGGCCCAT | + |
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Preference number: 2 (lower is better) Translates to: DLVFIVAEGDSLVCYNPLAPWLP*RKTEAH Trigger: ATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGC...AAGGGGATTATAGCACACTAGAGAGTCCCCCTCAGCCACAATAAACACCAGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | CTGATCGGAAAAGAGTCATCCCGCACGCACTCATTGGCTGTGTCCTaGCACTGTGCAGAAGATGACTCCATCAGTGTAAGTGGCCAAAAC | + |
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Preference number: 2 (lower is better) Translates to: LIGKESSRTHSLAVS*HCAEDDSISVSGQN Trigger: GTTTTGGCCACTTACACTGATGGAGTCATCTTCTGCACAGTGCAAGGACACAGCCAATGAGTGCGTGCGGGATGACTCTTTTCCGATCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR CCA 90 bp | GATCTGGTGTTTATTGTGGCTGAGGGGGACTCTCTAGTGTGCTATAATCCCCTTTTGAGAACTTCCAGCTaGCTGGGCCTGATGGAGATG | + |
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Preference number: 2 (lower is better) Translates to: DLVFIVAEGDSLVCYNPLLRTSS*LGLMEM Trigger: CATCTCCATCAGGCCCAGCCAGCTGGAAGTTCTCAA...AAGGGGATTATAGCACACTAGAGAGTCCCCCTCAGCCACAATAAACACCAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR TCA 90 bp | TTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCTTGCTGCCCTTGCAGTaGTCTCCTTGTGGAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: FLDLLGTKLGPYYTCWASLLPLQ*SPCGTL Trigger: AAGAGTTCCACAAGGAGATCACTGCAAGGGCAGCAA...GCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCTCTTCTCAGACTTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAGAGATTGGCCAAGGTTaGGACCCCAGTCATGTCGAC | + |
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Preference number: 2 (lower is better) Translates to: SLFSDLGTASLTRSVLKREIGQG*DPSHVD Trigger: GTCGACATGACTGGGGTCCCAACCTTGGCCAATCTC...TCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAAGTCTGAGAAGAGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | TTAGGCACAGCCTCTCTTACCAGATCAGTGTTAAAAAGAAGCACCTaGGCTCCCATGCAGGAAGACAGAGGCCCATTCCTCTTGTCTATA | + |
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Preference number: 2 (lower is better) Translates to: LGTASLTRSVLKRST*APMQEDRGPFLLSI Trigger: TATAGACAAGAGGAATGGGCCTCTGTCTTCCTGCATGGGAGCCAAGGTGCTTCTTTTTAACACTGATCTGGTAAGAGAGGCTGTGCCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR TCA 90 bp | AGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATCTGCTGGTGCCAACCTaGATGGAATCATCTACTTAC | + |
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Preference number: 2 (lower is better) Translates to: SVSGQNSLCHQITAACKHLLVPT*MESSTY Trigger: GTAAGTAGATGATTCCATTCAGGTTGGCACCAGCAG...ATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR CCA 90 bp | GACAATCTTGTTCTCTGTAGCCATCCAAGTGTTATTTCAGGAAGGAAGGCAAAGCTCCTTTGTGGAGATTaGCCAAGGTTGGGACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: DNLVLCSHPSVISGRKAKLLCGD*PRLGPQ Trigger: CTGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAG...CTTTGCCTTCCTTCCTGAAATAACACTTGGATGGCTACAGAGAACAAGATTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCGGACCTTTAAGGATACCTGTCTTAGTAGAGTCTTCACATGAGCTGATGGAGGCATTAAGGTGCTaGTTACCAACTTGCAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: RPGPLRIPVLVESSHELMEALRC*LPTCSL Trigger: CAAACTGCAAGTTGGTAAGCAGCACCTTAATGCCTC...CATCAGCTCATGTGAAGACTCTACTAAGACAGGTATCCTTAAAGGTCCGGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 90 bp | CAGGAAGGAAGGCAAAGGAGACACATTATCTACCAGTCAGCACATTaGCAGTGTGGTCGGGTTAAGCTGCTTTGTCCTGTAAACTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: QEGRQRRHIIYQSAH*QCGRVKLLCPVNLL Trigger: TAACAAGTTTACAGGACAAAGCAGCTTAACCCGACCACACTGCAAATGTGCTGACTGGTAGATAATGTGTCTCCTTTGCCTTCCTTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| 3UTR-3UTR GCA 90 bp | AGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATGCTGGGCAAGCACTTTaGCAAGTCATACAATTAAGA | + |
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Preference number: 2 (lower is better) Translates to: SVSGQNSLCHQITAACKHAGQAL*QVIQLR Trigger: TCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGC...ATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATTGTAATCTCAGTACTTaGAAAGTGGAGGCAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: SVSGQNSLCHQITAACKHCNLST*KVEAGE Trigger: TTCTCCTGCCTCCACTTTCCAAGTACTGAGATTACA...ATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR CCA 90 bp | TGTCACTTTCCACAAAGAATTAAGTATGAGAGTTTTGGATGGGACAGTGGACTAAGGCTGCCACCATTGTaGCACTTCTGGATCGACCAG | + |
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Preference number: 2 (lower is better) Translates to: CHFPQRIKYESFGWDSGLRLPPL*HFWIDQ Trigger: CTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCT...TAGTCCACTGTCCCATCCAAAACTCTCATACTTAATTCTTTGTGGAAAGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR-3UTR CCA 90 bp | TTAAGGATACCTGTCTTAGTAGAGTCTTCACATGAGCTGATGTCAGAATTTCAAACTGTTGACTGGGAGTaGTGTGCTCCTTTGCCCCGC | + |
|
Preference number: 2 (lower is better) Translates to: LRIPVLVESSHELMSEFQTVDWE*CAPLPR Trigger: GCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGT...TTGAAATTCTGACATCAGCTCATGTGAAGACTCTACTAAGACAGGTATCCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CCA 90 bp | GATTCTGACAGTAATAAGAACAGCTCTAGATACTTCTTTCCCTCTCTAGGATTACACTGGCCCAGTGCCTaGTACTTGAGAGCAAACTGG | + |
|
Preference number: 2 (lower is better) Translates to: DSDSNKNSSRYFFPSLGLHWPSA*YLRANW Trigger: CCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTG...TAATCCTAGAGAGGGAAAGAAGTATCTAGAGCTGTTCTTATTACTGTCAGAATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CCA 90 bp | CTACAGGATACCCTCTCGAATGCAGTTATCTACTATCGGGTAGGTGATAACGTGGTGTTGACTCCTGAATaGGTGACTTCTAAAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LQDTLSNAVIYYRVGDNVVLTPE*VTSKGK Trigger: TTTCCCTTTAGAAGTCACCCATTCAGGAGTCAACAC...CACGTTATCACCTACCCGATAGTAGATAACTGCATTCGAGAGGGTATCCTGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGATTCTGACAGTAATACCAGTGCCTGGTACTTaGGAGCAAACTGGACTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: WASTLPSHTIKIWILTVIPVPGT*EQTGLL Trigger: AAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGG...TATTACTGTCAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCCCTTATTATACATGCTaGGCAAGCACTTTGCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: FIFGPARDQIGALLYMLGPYYTC*ASTLPS Trigger: ACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGG...GCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR-3UTR CCA 90 bp | TTTATTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCTACTTGAGAGCAAACTaGACTCCTTTGTGGAGATTG | + |
|
Preference number: 2 (lower is better) Translates to: FIFGPARDQIGALLYMLGYLRAN*TPLWRL Trigger: CAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTA...GCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CAA 90 bp | ATTTCCTTATCCCTGTCAAAGAAAATAAGATTTAGCCAGACAATCTaGTTCTCTGTAGCCATCCAAGTGTTATTTCAGGAAGGAAGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: ISLSLSKKIRFSQTI*FSVAIQVLFQEGRQ Trigger: TTGCCTTCCTTCCTGAAATAACACTTGGATGGCTACAGAGAACAAGATTGTCTGGCTAAATCTTATTTTCTTTGACAGGGATAAGGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | CGACGCATGTGGAAATGTAACAATGCCACTGTTGACTaGGAGTGGTGTGCTCCTTTGCCCCGCGACCGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RRMWKCNNATVD*EWCAPLPRDRL Trigger: GAGGCGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | ACGTACTGCCCTTTGCAGGCCGCATGCACGCAGCAGTaGATAAGGATCTGGTGTTTATTGTGGCTGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TYCPLQAACTQQ*IRIWCLLWLRG Trigger: CCCCCTCAGCCACAATAAACACCAGATCCTTATGCACTGCTGCGTGCATGCGGCCTGCAAAGGGCAGTACGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | GAGAAAGGCAGCGCCTCAACCCATCCCCAAGGCTCATaGGATGCTCTGTGTAGGGCTTTTCACACTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: EKGSASTHPQGS*DALCRAFHTAA Trigger: AGCAGCAGTGTGAAAAGCCCTACACAGAGCATCCCATGAGCCTTGGGGATGGGTTGAGGCGCTGCCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | ATGTGGAAATGTAACAATGCCACTGTTGACTGGGAGTaGTGTGCTCCTTTGCCCCGCGACCGCCTCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MWKCNNATVDWE*CAPLPRDRLQH Trigger: GTGCTGGAGGCGGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR TCA 72 bp | TGGCCAAGGTTGGGACCCCAGTCATGTCGACTGTGCTaGGCCGTAGCTGCTCAACTCCTGCTTTCTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: WPRLGPQSCRLC*AVAAQLLLSSI Trigger: AATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCTCAGCACAGTCGACATGACTGGGGTCCCAACCTTGGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR TCA 72 bp | GAGAACTTCCAGCTGGCTGGGCCTGATGGAGATGTGTaGCCGGATTTTGGCGATCGCTTCTATAGCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: ENFQLAGPDGDV*PDFGDRFYSLL Trigger: GAGGAGGCTATAGAAGCGATCGCCAAAATCCGGTCACACATCTCCATCAGGCCCAGCCAGCTGGAAGTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR TCA 72 bp | TCCAGTGCTTTGACACAGAAACTGACAAGTGCCACGTaGAGCCCTACGTACTGCCCTTTGCAGGCCGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: SSALTQKLTSAT*SPTYCPLQAAC Trigger: GCATGCGGCCTGCAAAGGGCAGTACGTAGGGCTTCACGTGGCACTTGTCAGTTTCTGTGTCAAAGCACTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | GGGACCCCAGTCATGTCGACTGTGCTGAGCCGTAGCTaGTCAACTCCTGCTTTCTTCCATTCCTGTAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: GTPVMSTVLSRS*STPAFFHSCNL Trigger: GAGATTACAGGAATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCTCAGCACAGTCGACATGACTGGGGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | CTCTGGGCTCCAGTTGTGTACCTGAATCAGATAGGCTaGCACCATTGTGGCACTTCTGGATCGACCAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LWAPVVYLNQIG*HHCGTSGSTSL Trigger: AAGGCTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATCTGATTCAGGTACACAACTGGAGCCCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | CGACTGATCCAGTGCTTTGACACAGAAACTGACAAGTaGCACGTGAAGCCCTACGTACTGCCCTTTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: RLIQCFDTETDK*HVKPYVLPFAG Trigger: GCCTGCAAAGGGCAGTACGTAGGGCTTCACGTGGCACTTGTCAGTTTCTGTGTCAAAGCACTGGATCAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | AGTGCCTGGTACTTGAGAGCAAACTGGACTCCTTTGTaGAGATTGGCCAAGGTTGGGACCCCAGTCATGTCG | + |
|
Preference number: 3 (lower is better) Translates to: SAWYLRANWTPL*RLAKVGTPVMS Trigger: CGACATGACTGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | CTGGTGTTTATTGTGGCTGAGGGGGACTCTCTAGTGTaGTATAATCCCCTTCTAGACAGCTTCACCCGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LVFIVAEGDSLV*YNPLLDSFTRL Trigger: GAGCCGGGTGAAGCTGTCTAGAAGGGGATTATAGCACACTAGAGAGTCCCCCTCAGCCACAATAAACACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR TCA 72 bp | AATGCACATAGACACACTGGCCCAGTGCCTGGTACTTaGGAGCAAACTGGACTCCTTTGTGGAGATTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NAHRHTGPVPGT*EQTGLLCGDWP Trigger: TGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTGTGTCTATGTGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | ACCAGCCTTACAATGCACATAGACACACTGGCCCAGTaGCTGGTACTTGAGAGCAAACTGGACTCCTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TSLTMHIDTLAQ*LVLESKLDSFV Trigger: CACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTGTGTCTATGTGCATTGTAAGGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | TGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTaGAGCCTGCAAGCATGGTGGCGACCTGTATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: CKWPKQLMPPNH*SLQAWWRPVCG Trigger: ACCACATACAGGTCGCCACCATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | GATGACTCCATCAGTGTAAGTGGCCAAAACAGCTTATaGCACCAAATCACTGCAGCCTGCAAGCATGGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: DDSISVSGQNSL*HQITAACKHGG Trigger: GCCACCATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACTGATGGAGTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGAAGGAAGGCAAAGGAGACACATTATCTACCAGTCAGCACATTTGCAGTGGAGATTGGCCAAGGTaGGGACCCCAGTCATGTCGA | + |
|
Preference number: 3 (lower is better) Translates to: FRKEGKGDTLSTSQHICSGDWPR*GPQSCR Trigger: TCGACATGACTGGGGTCCCAACCTTGGCCAATCTCC...ACTGCAAATGTGCTGACTGGTAGATAATGTGTCTCCTTTGCCTTCCTTCCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | AGAGACAACTCAGTTAGAGGTGGCTGTGTCTGGGGCTaGTGGTGCCAACCTGAATGGAATCATCTACTTACT | + |
|
Preference number: 3 (lower is better) Translates to: RDNSVRGGCVWG*WCQPEWNHLLT Trigger: AGTAAGTAGATGATTCCATTCAGGTTGGCACCAGCAGCCCCAGACACAGCCACCTCTAACTGAGTTGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | AGTTGTGTACCTGAATCAGATAGGCTGCCACCATTGTaGCACTTCTGGATCGACCAGCCTTACAATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: SCVPESDRLPPL*HFWIDQPYNAH Trigger: ATGTGCATTGTAAGGCTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATCTGATTCAGGTACACAACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | ATCGGTAATCCCCCAGTTCAGAGAAATGTGTTAGTTTaGGCATATGTGAGAAAGGCAGCGCCTCAACCCATC | + |
|
Preference number: 3 (lower is better) Translates to: IGNPPVQRNVLV*AYVRKAAPQPI Trigger: GATGGGTTGAGGCGCTGCCTTTCTCACATATGCCCAAACTAACACATTTCTCTGAACTGGGGGATTACCGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGATACCTGTCTTAGTAGAGTCTTCACATGAGCTGATGTCAGAATTTCAACCTACGTACTGCCCTTaGCAGGCCGCATGCACGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRIPVLVESSHELMSEFQPTYCP*QAACTQ Trigger: CTGCGTGCATGCGGCCTGCAAAGGGCAGTACGTAGG...TTGAAATTCTGACATCAGCTCATGTGAAGACTCTACTAAGACAGGTATCCTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAAGAATACTCCTTTGTGGAGATaGGCCAAGGTTGGGACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: EFWMGQWTKLKMYFTSKNTPLWR*AKVGTP Trigger: TGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGT...ATTCTTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCCTTGCAGTGATCTCCTaGTGGAACTCTTTGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: FLDLLGTKLGPYYTCWASLAVIS*WNSLRT Trigger: AGTTCTCAAAGAGTTCCACAAGGAGATCACTGCAAG...GCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | GATCTGGTGTTTATTGTGGCTGAGGGGGACTCTCTAGTGTGCTATAATCCCCTTTTTAGCCAGACAATCTaGTTCTCTGTAGCCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: DLVFIVAEGDSLVCYNPLFSQTI*FSVAIQ Trigger: TTGGATGGCTACAGAGAACAAGATTGTCTGGCTAAA...AAGGGGATTATAGCACACTAGAGAGTCCCCCTCAGCCACAATAAACACCAGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TTGGATTCTGACAGTAATAAGAACAGCTCTAGATACTTCTTTCCCTCTCTAGGAGATAGGCTGCCACCATaGTGGCACTTCTGGATCGAC | + |
|
Preference number: 3 (lower is better) Translates to: LDSDSNKNSSRYFFPSLGDRLPP*WHFWID Trigger: GTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATC...TCCTAGAGAGGGAAAGAAGTATCTAGAGCTGTTCTTATTACTGTCAGAATCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | GACCTGCTAGGGACCAAATTGGGGCCTTATTATACATaGTGGGCAAGCACTTTGCCAAGTCATACAATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: DLLGTKLGPYYT*WASTLPSHTIK Trigger: CTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | GCATTAAGGTGCTGCTTACCAACTTGCAGTTTGTGTTaGCCTAAAACAGTGATGAGAAGAACAGCTGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: ALRCCLPTCSLC*PKTVMRRTADS Trigger: GGAGTCAGCTGTTCTTCTCATCACTGTTTTAGGCCAACACAAACTGCAAGTTGGTAAGCAGCACCTTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | AATGCAGTTATCTACTATCGGGTAGGTGATAACGTGTaGACAGAGACAACTCAGTTAGAGGTGGCTGTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: NAVIYYRVGDNV*TETTQLEVAVS Trigger: AGACACAGCCACCTCTAACTGAGTTGTCTCTGTCCACACGTTATCACCTACCCGATAGTAGATAACTGCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTAAGTGGCCAAAACAGCTTATGCCACCAAATCACTGCAGCCTGCAAGCATCTTTGTCCTGTAAACTaGTTACTATATCTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVSGQNSLCHQITAACKHLCPVN*LLYLRE Trigger: CTCCCTGAGATATAGTAACAAGTTTACAGGACAAAG...ATGCTTGCAGGCTGCAGTGATTTGGTGGCATAAGCTGTTTTGGCCACTTACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCACTTTGCCAAGTCATACATGCTGGGCAAGCACTTaGCCAAGTCATACAATTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TKLGPYYTCWASTLPSHTCWAST*PSHTIK Trigger: CTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCA...TGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | CTGTCACAAGAGGCATTAAGGTGCTGCTTACCAACTTaGAGTTTGTGTTGGCCTAAAACAGTGATGAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LSQEALRCCLPT*SLCWPKTVMRR Trigger: TCTTCTCATCACTGTTTTAGGCCAACACAAACTGCAAGTTGGTAAGCAGCACCTTAATGCCTCTTGTGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGGAAGGAAGGCAAAGGAGACACATTATCTACCAGTCAGCACATTTGCAGTTTTAGCCAGACAATCTaGTTCTCTGTAGCCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: FRKEGKGDTLSTSQHICSFSQTI*FSVAIQ Trigger: TTGGATGGCTACAGAGAACAAGATTGTCTGGCTAAA...ACTGCAAATGTGCTGACTGGTAGATAATGTGTCTCCTTTGCCTTCCTTCCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | CTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTaGGCAAGCACTTTGCCAAGTCATACAATTAAGATT | + |
|
Preference number: 3 (lower is better) Translates to: LLGTKLGPYYTC*ASTLPSHTIKI Trigger: AATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGGATACCTGTCTTAGTAGAGTCTTCACATGAGCTGATGTCAGAATTTCAATCCTTGTGGAACTCTTaGAGAACTTCCAGCTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRIPVLVESSHELMSEFQSLWNS*RTSSWL Trigger: CAGCCAGCTGGAAGTTCTCAAAGAGTTCCACAAGGA...TTGAAATTCTGACATCAGCTCATGTGAAGACTCTACTAAGACAGGTATCCTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TGTCACTTTCCACAAAGAATTAAGTATGAGAGTTTTGGATGGGACAGTGGACTAATTTGTGTGTCTGTGTaGACTCCTGAATGGGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: CHFPQRIKYESFGWDSGLICVSV*TPEWVT Trigger: AGTCACCCATTCAGGAGTCAACACAGACACACAAAT...TAGTCCACTGTCCCATCCAAAACTCTCATACTTAATTCTTTGTGGAAAGTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTATCCCTGTCAAAGAAAATAAGATTTAGCCAGACAATCTTGTTCTCTGTACTGCTAGGGACCAAATaGGGGCCTTATTATACATGC | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSKKIRFSQTILFSVLLGTK*GPYYTC Trigger: GCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAG...TACAGAGAACAAGATTGTCTGGCTAAATCTTATTTTCTTTGACAGGGATAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR GCA 72 bp | AGGCTGATGCAGGAGAATCTAAGTATGAACAGTTTGTaGTACGCAGCAAGATCTTGTTTGAATAAACATGTA | + |
|
Preference number: 3 (lower is better) Translates to: RLMQENLSMNSL*YAARSCLNKHV Trigger: TACATGTTTATTCAAACAAGATCTTGCTGCGTAGCACAAACTGTTCATACTTAGATTCTCCTGCATCAGCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGAAAATAAGATTTAGCCAGACAATCTTGTTCTCTGTAGCCATCCAAGTGCTTTGTCCTGTAAACTaGTTACTATATCTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SKKIRFSQTILFSVAIQVLCPVN*LLYLRE Trigger: CTCCCTGAGATATAGTAACAAGTTTACAGGACAAAG...CACTTGGATGGCTACAGAGAACAAGATTGTCTGGCTAAATCTTATTTTCTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR CCA 72 bp | TGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTaGATTCTGACAGTAATAAGAACAGCTCTAGATACT | + |
|
Preference number: 3 (lower is better) Translates to: WASTLPSHTIKI*ILTVIRTALDT Trigger: AGTATCTAGAGCTGTTCTTATTACTGTCAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
||
| 3UTR CAA 72 bp | AGCTGGCTGGGCCTGATGGAGATGTGTGACCGGATTTaGGCGATCGCTTCTATAGCCTCCTCTGGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SWLGLMEMCDRI*AIASIASSGLQ Trigger: CTGGAGCCCAGAGGAGGCTATAGAAGCGATCGCCAAAATCCGGTCACACATCTCCATCAGGCCCAGCCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CAA 72 bp | CTGAGGCCTGGAGCTCTGCCCCATCCCTCTGGAAGATaGCCAGCTGTAATGGCAGCATCTACGTCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRPGALPHPSGR*PAVMAASTSSG Trigger: CCCTGAAGACGTAGATGCTGCCATTACAGCTGGCAATCTTCCAGAGGGATGGGGCAGAGCTCCAGGCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| 3UTR CAA 72 bp | TCCCACGACGCATGTGGAAATGTAACAATGCCACTGTaGACTGGGAGTGGTGTGCTCCTTTGCCCCGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: SHDACGNVTMPL*TGSGVLLCPAT Trigger: GGTCGCGGGGCAAAGGAGCACACCACTCCCAGTCAACAGTGGCATTGTTACATTTCCACATGCGTCGTGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
||
| CDS-3UTR GCA 90 bp | GTAAGAGCAGATGTGGTGCATGCTATAATCCCCCTGGAGGCTGATGCAGGAGAAGAACCGTGTGGTCGATaGGGTGGTACCAGTCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRADVVHAIIPLEADAGEEPCGR*GGTSRG Trigger: ACCGCGACTGGTACCACCGCATCGACCACACGGTTC...TTCTCCTGCATCAGCCTCCAGGGGGATTATAGCATGCACCACATCTGCTCTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 72 bp | CCCAGTGCCTGGTACTTGAGAGCAAACTGGACTCCTTaGTGGAGATTGGCCAAGGTTGGGACCCCAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: PSAWYLRANWTP*WRLAKVGTPVM Trigger: CATGACTGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| CDS-3UTR GCA 90 bp | TTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCGAACCGTGTGGTCGATaGGGTGGTACCAGTCGCGGT | + |
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Preference number: 4 (lower is better) Translates to: FLDLLGTKLGPYYTCWASEPCGR*GGTSRG Trigger: ACCGCGACTGGTACCACCGCATCGACCACACGGTTC...GCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| 3UTR CAA 72 bp | TGGTACTTGAGAGCAAACTGGACTCCTTTGTGGAGATaGGCCAAGGTTGGGACCCCAGTCATGTCGACTGTG | + |
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Preference number: 4 (lower is better) Translates to: WYLRANWTPLWR*AKVGTPVMSTV Trigger: CACAGTCGACATGACTGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 72 bp | CCTGACTCAGCAGTCCTGCCTACACCCCATATATCCTaGAACATTCTGATCACTCCCCAGAAGTGTGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: PDSAVLPTPHIS*NILITPQKCEG Trigger: CCCCTCACACTTCTGGGGAGTGATCAGAATGTTCAAGGATATATGGGGTGTAGGCAGGACTGCTGAGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| CDS-3UTR CCA 90 bp | GAGTTTTGGATGGGACAGTGGACTAAGCTAAAAATGTACTTCACCAGCAAGAATGTGTGGTCGATGCGGTaGTACCAGTCGCGGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: EFWMGQWTKLKMYFTSKNVWSMR*YQSRCA Trigger: GGCGCACCGCGACTGGTACCACCGCATCGACCACAC...ATTCTTGCTGGTGAAGTACATTTTTAGCTTAGTCCACTGTCCCATCCAAAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| CDS-3UTR CCA 90 bp | TTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCAGGCTGCCACCATTGTaGCACTTCTGGATCGACCAG | + |
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Preference number: 4 (lower is better) Translates to: FLDLLGTKLGPYYTCWASRLPPL*HFWIDQ Trigger: CTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCT...GCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| 3UTR CAA 72 bp | TCCAGTTGTGTACCTGAATCAGATAGGCTGCCACCATaGTGGCACTTCTGGATCGACCAGCCTTACAATGCA | + |
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Preference number: 4 (lower is better) Translates to: SSCVPESDRLPP*WHFWIDQPYNA Trigger: TGCATTGTAAGGCTGGTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATCTGATTCAGGTACACAACTGGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 72 bp | AAAGAGTCATCCCGCACGCACTCATTGGCTGTGTCCTaGCACTGTGCAGAAGATGACTCCATCAGTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: KESSRTHSLAVS*HCAEDDSISVS Trigger: ACTTACACTGATGGAGTCATCTTCTGCACAGTGCAAGGACACAGCCAATGAGTGCGTGCGGGATGACTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| CDS-3UTR CCA 90 bp | ACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCACTTTGCCAAGTCATACAGAGATTGGCCAAGGTTaGGACCCCAGTCATGTCGAC | + |
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Preference number: 4 (lower is better) Translates to: TKLGPYYTCWASTLPSHTEIGQG*DPSHVD Trigger: GTCGACATGACTGGGGTCCCAACCTTGGCCAATCTC...TGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR TCA 90 bp | TGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGATTCTGACAGTAATACCAGCTGGCTGGGCCTaGTGGAGATGTGTGACCGGA | + |
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Preference number: 4 (lower is better) Translates to: WASTLPSHTIKIWILTVIPAGWA*WRCVTG Trigger: TCCGGTCACACATCTCCATCAGGCCCAGCCAGCTGG...TATTACTGTCAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CCA 90 bp | TCTGACAGTAATAAGAACAGCTCTAGATACTTCTTTCCCTCTCTAGGATTAAATGTGTGGTCGATGCGGTaGTACCAGTCGCGGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SDSNKNSSRYFFPSLGLNVWSMR*YQSRCA Trigger: GGCGCACCGCGACTGGTACCACCGCATCGACCACAC...ATTTAATCCTAGAGAGGGAAAGAAGTATCTAGAGCTGTTCTTATTACTGTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS-3UTR CCA 90 bp | CCTTATTATACATGCTGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGCCCAGCAGAACCGTGTaGTCGATGCGGTGGTACCAG | + |
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Preference number: 4 (lower is better) Translates to: PYYTCWASTLPSHTIKIWPSRTV*SMRWYQ Trigger: CTGGTACCACCGCATCGACCACACGGTTCTGCTGGG...CCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS-3UTR CCA 90 bp | GACAATCTTGTTCTCTGTAGCCATCCAAGTGTTATTTCAGGAAGGAAGGCAAAGTTGAGAACTTCCAGCTaGCTGGGCCTGATGGAGATG | + |
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Preference number: 4 (lower is better) Translates to: DNLVLCSHPSVISGRKAKLRTSS*LGLMEM Trigger: CATCTCCATCAGGCCCAGCCAGCTGGAAGTTCTCAA...CTTTGCCTTCCTTCCTGAAATAACACTTGGATGGCTACAGAGAACAAGATTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR TCA 90 bp | GACAATCTTGTTCTCTGTAGCCATCCAAGTGTTATTTCAGGAAGGAAGGCAAAGTTGCTGCCCTTGCAGTaGTCTCCTTGTGGAACTCTT | + |
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Preference number: 4 (lower is better) Translates to: DNLVLCSHPSVISGRKAKLLPLQ*SPCGTL Trigger: AAGAGTTCCACAAGGAGATCACTGCAAGGGCAGCAA...CTTTGCCTTCCTTCCTGAAATAACACTTGGATGGCTACAGAGAACAAGATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR GCA 90 bp | ACATGCTGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGATTCTGACAGACACACTGGCCCAGTaGCTGGTACTTGAGAGCAAA | + |
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Preference number: 4 (lower is better) Translates to: TCWASTLPSHTIKIWILTDTLAQ*LVLESK Trigger: TTTGCTCTCAAGTACCAGGCACTGGGCCAGTGTGTC...TGTCAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR TCA 90 bp | CCTTATTATACATGCTGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGCCAGTGCCTGGTACTTaGGAGCAAACTGGACTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PYYTCWASTLPSHTIKIWPVPGT*EQTGLL Trigger: AAGGAGTCCAGTTTGCTCTCAAGTACCAGGCACTGG...CCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CCA 90 bp | TGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGATTCTGACAGTAATACACTGGCCCAGTGCCTaGTACTTGAGAGCAAACTGG | + |
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Preference number: 4 (lower is better) Translates to: WASTLPSHTIKIWILTVIHWPSA*YLRANW Trigger: CCAGTTTGCTCTCAAGTACCAGGCACTGGGCCAGTG...TATTACTGTCAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CCA 90 bp | ACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCACTTTGCCAAGTCATACATACTTGAGAGCAAACTaGACTCCTTTGTGGAGATTG | + |
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Preference number: 4 (lower is better) Translates to: TKLGPYYTCWASTLPSHTYLRAN*TPLWRL Trigger: CAATCTCCACAAAGGAGTCCAGTTTGCTCTCAAGTA...TGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| 3UTR CAA 72 bp | TGGAGGCTGATGCAGGAGAATCTAAGTATGAACAGTTaGTGCTACGCAGCAAGATCTTGTTTGAATAAACAT | + |
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Preference number: 4 (lower is better) Translates to: WRLMQENLSMNS*CYAARSCLNKH Trigger: ATGTTTATTCAAACAAGATCTTGCTGCGTAGCACAAACTGTTCATACTTAGATTCTCCTGCATCAGCCTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125001.11 |
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| 3UTR CAA 72 bp | AAATTGGGGCCTTATTATACATGCTGGGCAAGCACTTaGCCAAGTCATACAATTAAGATTTGGATTCTGACA | + |
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Preference number: 4 (lower is better) Translates to: KLGPYYTCWAST*PSHTIKIWILT Trigger: TGTCAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| 3UTR CAA 72 bp | TCCCTGTCAAAGAAAATAAGATTTAGCCAGACAATCTaGTTCTCTGTAGCCATCCAAGTGTTATTTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SLSKKIRFSQTI*FSVAIQVLFQE Trigger: TTCCTGAAATAACACTTGGATGGCTACAGAGAACAAGATTGTCTGGCTAAATCTTATTTTCTTTGACAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS CCA 90 bp | TTCTTCAGCGGCAGCGCGCCCAGCAGAACCGTGTGGTCGATGCGGTaGTACCAGTCGCGGTGCGCCGGGCCGCGCACCCTCCCCCGGAAC | + |
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Preference number: 5 (lower is better) Translates to: FFSGSAPSRTVWSMR*YQSRCAGPRTLPRN Trigger: GTTCCGGGGGAGGGTGCGCGGCCCGGCGCACCGCGACTGGTACCACCGCATCGACCACACGGTTCTGCTGGGCGCGCTGCCGCTGAAGAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS CCA 90 bp | CGGCGCGTCATGTTCTTCAGCGGCAGCGCGCCCAGCAGAACCGTGTaGTCGATGCGGTGGTACCAGTCGCGGTGCGCCGGGCCGCGCACC | + |
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Preference number: 5 (lower is better) Translates to: RRVMFFSGSAPSRTV*SMRWYQSRCAGPRT Trigger: GGTGCGCGGCCCGGCGCACCGCGACTGGTACCACCGCATCGACCACACGGTTCTGCTGGGCGCGCTGCCGCTGAAGAACATGACGCGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS GCA 90 bp | TCATGTTCTTCAGCGGCAGCGCGCCCAGCAGAACCGTGTGGTCGATaGGGTGGTACCAGTCGCGGTGCGCCGGGCCGCGCACCCTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: SCSSAAARPAEPCGR*GGTSRGAPGRAPSP Trigger: GGGGGAGGGTGCGCGGCCCGGCGCACCGCGACTGGTACCACCGCATCGACCACACGGTTCTGCTGGGCGCGCTGCCGCTGAAGAACATGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS GCA 90 bp | GCCAAGGTTGGGACCCCAGTCATGTCGACTGTGCTGAGCCGTAGCTaGTCAACTCCTGCTTTCTTCCATTCCTTCGAGGTGTTGCACAGG | + |
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Preference number: 5 (lower is better) Translates to: AKVGTPVMSTVLSRS*STPAFFHSFEVLHR Trigger: CCTGTGCAACACCTCGAAGGAATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCTCAGCACAGTCGACATGACTGGGGTCCCAACCTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS TCA 90 bp | TGTGGAGATTGGCCAAGGTTGGGACCCCAGTCATGTCGACTGTGCTaGGCCGTAGCTGCTCAACTCCTGCTTTCTTCCATTCCTTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: CGDWPRLGPQSCRLC*AVAAQLLLSSIPSR Trigger: CCTCGAAGGAATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCTCAGCACAGTCGACATGACTGGGGTCCCAACCTTGGCCAATCTCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CAA 90 bp | TTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCACTCCTTTGTGGAGATaGGCCAAGGTTGGGACCCCA | + |
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Preference number: 5 (lower is better) Translates to: FLDLLGTKLGPYYTCWASTPLWR*AKVGTP Trigger: TGGGGTCCCAACCTTGGCCAATCTCCACAAAGGAGT...GCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CAA 90 bp | TTTATTTTTGGACCTGCTAGGGACCAAATTGGGGCCTTATTATACATGCTGGGCGGAGATTGGCCAAGGTaGGGACCCCAGTCATGTCGA | + |
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Preference number: 5 (lower is better) Translates to: FIFGPARDQIGALLYMLGGDWPR*GPQSCR Trigger: TCGACATGACTGGGGTCCCAACCTTGGCCAATCTCC...GCCCAGCATGTATAATAAGGCCCCAATTTGGTCCCTAGCAGGTCCAAAAATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CAA 90 bp | GACCAAATTGGGGCCTTATTATACATGCTGGGCAAGCACTTTGCCAAGTCATACGATAGGCTGCCACCATaGTGGCACTTCTGGATCGAC | + |
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Preference number: 5 (lower is better) Translates to: DQIGALLYMLGKHFAKSYDRLPP*WHFWID Trigger: GTCGATCCAGAAGTGCCACAATGGTGGCAGCCTATC...GTATGACTTGGCAAAGTGCTTGCCCAGCATGTATAATAAGGCCCCAATTTGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CAA 90 bp | ACATGCTGGGCAAGCACTTTGCCAAGTCATACAATTAAGATTTGGATTCTGACACATTCCTTCGAGGTGTaGCACAGGAATCGGGTCTCG | + |
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Preference number: 5 (lower is better) Translates to: TCWASTLPSHTIKIWILTHSFEV*HRNRVS Trigger: CGAGACCCGATTCCTGTGCAACACCTCGAAGGAATG...TGTCAGAATCCAAATCTTAATTGTATGACTTGGCAAAGTGCTTGCCCAGCATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CAA 90 bp | GACAATCTTGTTCTCTGTAGCCATCCAAGTGTTATTTCAGGAAGGAAGGCAAAGTCCTTGTGGAACTCTTaGAGAACTTCCAGCTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: DNLVLCSHPSVISGRKAKSLWNS*RTSSWL Trigger: CAGCCAGCTGGAAGTTCTCAAAGAGTTCCACAAGGA...CTTTGCCTTCCTTCCTGAAATAACACTTGGATGGCTACAGAGAACAAGATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS-3UTR CAA 90 bp | TTCAGGAAGGAAGGCAAAGGAGACACATTATCTACCAGTCAGCACATTTGCAGTCTTGCAGTGATCTCCTaGTGGAACTCTTTGAGAACT | + |
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Preference number: 5 (lower is better) Translates to: FRKEGKGDTLSTSQHICSLAVIS*WNSLRT Trigger: AGTTCTCAAAGAGTTCCACAAGGAGATCACTGCAAG...ACTGCAAATGTGCTGACTGGTAGATAATGTGTCTCCTTTGCCTTCCTTCCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS CCA 72 bp | GGCAGCGCGCCCAGCAGAACCGTGTGGTCGATGCGGTaGTACCAGTCGCGGTGCGCCGGGCCGCGCACCCTC | + |
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Preference number: 6 (lower is better) Translates to: GSAPSRTVWSMR*YQSRCAGPRTL Trigger: GAGGGTGCGCGGCCCGGCGCACCGCGACTGGTACCACCGCATCGACCACACGGTTCTGCTGGGCGCGCTGCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS GCA 72 bp | TCAGCGGCAGCGCGCCCAGCAGAACCGTGTGGTCGATaGGGTGGTACCAGTCGCGGTGCGCCGGGCCGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SAAARPAEPCGR*GGTSRGAPGRA Trigger: TGCGCGGCCCGGCGCACCGCGACTGGTACCACCGCATCGACCACACGGTTCTGCTGGGCGCGCTGCCGCTGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS CCA 72 bp | ATGTTCTTCAGCGGCAGCGCGCCCAGCAGAACCGTGTaGTCGATGCGGTGGTACCAGTCGCGGTGCGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: MFFSGSAPSRTV*SMRWYQSRCAG Trigger: CCCGGCGCACCGCGACTGGTACCACCGCATCGACCACACGGTTCTGCTGGGCGCGCTGCCGCTGAAGAACAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111461.13 ENSMUST00000125001.11 |
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| CDS GCA 72 bp | GGGACCCCAGTCATGTCGACTGTGCTGAGCCGTAGCTaGTCAACTCCTGCTTTCTTCCATTCCTTCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: GTPVMSTVLSRS*STPAFFHSFEV Trigger: CACCTCGAAGGAATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCTCAGCACAGTCGACATGACTGGGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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| CDS CAA 90 bp | AGCCGTAGCTGCTCAACTCCTGCTTTCTTCCATTCCTTCGAGGTGTaGCACAGGAATCGGGTCTCGTACTCCTCGTTCATAGTGATCACC | + |
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Preference number: 6 (lower is better) Translates to: SRSCSTPAFFHSFEV*HRNRVSYSSFIVIT Trigger: GGTGATCACTATGAACGAGGAGTACGAGACCCGATTCCTGTGCAACACCTCGAAGGAATGGAAGAAAGCAGGAGTTGAGCAGCTACGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111461.13 |
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