Pregenerated sensors for PTPDC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038042Ensembl transcript IDs: ENSMUST00000035824.11, ENSMUST00000222028.2, ENSMUST00000223025.2, ENSMUST00000238995.2
Found 376 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTaGGGCAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: RSRHPQPREAALTMD*GRKRGQHWSSGRGA Trigger: TGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| 3UTR TCA 90 bp | CTGGAGCCACAGTTCAGAGGGCTACAGGGGCTCCTGACCATCTCGTaGACAGGGCCCGGGACCCAGCCACCAGGAGCCTCACACCGGCAA | + |
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Preference number: 1 (lower is better) Translates to: LEPQFRGLQGLLTIS*TGPGTQPPGASHRQ Trigger: TTGCCGGTGTGAGGCTCCTGGTGGCTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAGCCCCTGTAGCCCTCTGAACTGTGGCTCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | GCCTGGCTTACTCTAGCTCTGAGCGCCTGTGAAGGATGGTCACACTaGCCCCAGGGAGCAGGGCTGGCTAGGAGCTGTGCCCTGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: AWLTLALSACEGWSH*PQGAGLARSCALVL Trigger: CAGTACCAGGGCACAGCTCCTAGCCAGCCCTGCTCCCTGGGGGCAGTGTGACCATCCTTCACAGGCGCTCAGAGCTAGAGTAAGCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR CCA 90 bp | AAGTGGCTGGCCTGGCTTACTCTAGCTCTGAGCGCCTGTGAAGGATaGTCACACTGCCCCCAGGGAGCAGGGCTGGCTAGGAGCTGTGCC | + |
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Preference number: 1 (lower is better) Translates to: KWLAWLTLALSACEG*SHCPQGAGLARSCA Trigger: GGCACAGCTCCTAGCCAGCCCTGCTCCCTGGGGGCAGTGTGACCATCCTTCACAGGCGCTCAGAGCTAGAGTAAGCCAGGCCAGCCACTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR TCA 90 bp | CAGCTTTGGGGCTGGGCACAAGCCGGGCAGCAATGCCAGCACTCCTaGCAGAAAGTGGCTGGCCTGGCTTACTCTAGCTCTGAGCGCCTG | + |
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Preference number: 1 (lower is better) Translates to: QLWGWAQAGQQCQHS*QKVAGLAYSSSERL Trigger: CAGGCGCTCAGAGCTAGAGTAAGCCAGGCCAGCCACTTTCTGTCAGGAGTGCTGGCATTGCTGCCCGGCTTGTGCCCAGCCCCAAAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR TCA 90 bp | ATAACTAAAAGAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTaGCAATGGACTGAGGCAGGAAGCGCGGCCAGCACTGGTCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: ITKRGAVILSPGRRH*QWTEAGSAASTGPR Trigger: CCGAGGACCAGTGCTGGCCGCGCTTCCTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTCTTTTAGTTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| 3UTR CCA 90 bp | GCTGGGCACAAGCCGGGCAGCAATGCCAGCACTCCTGACAGAAAGTaGCTGGCCTGGCTTACTCTAGCTCTGAGCGCCTGTGAAGGATGG | + |
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Preference number: 1 (lower is better) Translates to: AGHKPGSNASTPDRK*LAWLTLALSACEGW Trigger: CCATCCTTCACAGGCGCTCAGAGCTAGAGTAAGCCAGGCCAGCCACTTTCTGTCAGGAGTGCTGGCATTGCTGCCCGGCTTGTGCCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR GCA 90 bp | GAGCAGGGCTGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTaGACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCTTAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: EQGWLGAVPWYCCLF*TVRGGQGSLLLLSS Trigger: GCTGCTAAGGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAGCCCTGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR CCA 90 bp | TGTGGTCCGTTTCTCTGTACAGCAGGGACCTGGCTCAGCAGCAGGTaGGGGAAGCAGGATAAGGTCTCTGGGTTGAGAGCTGCTCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: CGPFLCTAGTWLSSR*GKQDKVSGLRAAPS Trigger: GGAGGGAGCAGCTCTCAACCCAGAGACCTTATCCTGCTTCCCCCACCTGCTGCTGAGCCAGGTCCCTGCTGTACAGAGAAACGGACCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR CCA 90 bp | CGGGGAGGACAAGGGTCACTTCTGCTCCTTAGCAGCTGCCCATCCTaGCCACTTGTGGTCCGTTTCTCTGTACAGCAGGGACCTGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RGGQGSLLLLSSCPS*PLVVRFSVQQGPGS Trigger: TGAGCCAGGTCCCTGCTGTACAGAGAAACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTGACCCTTGTCCTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR CCA 90 bp | TGCAGACCAGCATGCGGCACTGCCTCAGACAGGTCTGTGCTGTCTTaGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGGACTGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CRPACGTASDRSVLS*VSCPCGNCALGLEP Trigger: TGGCTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | TCAGACAGGTCTGTGCTGTCTTGGGTTTCCTGTCCGTGTGGGAACTaGGCCTTAGGACTGGAGCCACAGTTCAGAGGGCTACAGGGGCTC | + |
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Preference number: 1 (lower is better) Translates to: SDRSVLSWVSCPCGN*ALGLEPQFRGLQGL Trigger: GAGCCCCTGTAGCCCTCTGAACTGTGGCTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR CCA 90 bp | AAAACAGCCACTAGCAACAGAGCAGGCCAAGGCAGGCTGAGGCAATaGGCTTATGAAAGGGCAGCTTTGGGGCTGGGCACAAGCCGGGCA | + |
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Preference number: 1 (lower is better) Translates to: KTATSNRAGQGRLRQ*AYERAALGLGTSRA Trigger: TGCCCGGCTTGTGCCCAGCCCCAAAGCTGCCCTTTCATAAGCCCATTGCCTCAGCCTGCCTTGGCCTGCTCTGTTGCTAGTGGCTGTTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR GCA 90 bp | GCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCACTCAGTTCAGGCTaGAGACCAGCATGCGGCACTGCCTCAGACAGGTCTGTGCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: ALAASILLASALSSG*RPACGTASDRSVLS Trigger: AGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR CCA 90 bp | CACTGCCTCAGACAGGTCTGTGCTGTCTTGGGTTTCCTGTCCGTGTaGGAACTGCGCCTTAGGACTGGAGCCACAGTTCAGAGGGCTACA | + |
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Preference number: 1 (lower is better) Translates to: HCLRQVCAVLGFLSV*ELRLRTGATVQRAT Trigger: TGTAGCCCTCTGAACTGTGGCTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR CCA 90 bp | CCAGGAGCCTCACACCGGCAATGGGTGACCTGCTCTGGATCCTTATaGATACTTGTGAAGTTGGGCGGCACTGGCTCTCCAGGATTGTGT | + |
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Preference number: 1 (lower is better) Translates to: PGASHRQWVTCSGSL*ILVKLGGTGSPGLC Trigger: ACACAATCCTGGAGAGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGGATCCAGAGCAGGTCACCCATTGCCGGTGTGAGGCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR TCA 90 bp | CTTACAGCAAAACAGCCACTAGCAACAGAGCAGGCCAAGGCAGGCTaGGGCAATGGGCTTATGAAAGGGCAGCTTTGGGGCTGGGCACAA | + |
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Preference number: 1 (lower is better) Translates to: LTAKQPLATEQAKAG*GNGLMKGQLWGWAQ Trigger: TTGTGCCCAGCCCCAAAGCTGCCCTTTCATAAGCCCATTGCCTCAGCCTGCCTTGGCCTGCTCTGTTGCTAGTGGCTGTTTTGCTGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR TCA 90 bp | TTCCAGAGGGGGTCAAACTCCTGCTCAGTAGAGAGAATCACATCCTaGTTCTCGAACTCGGCCACCTCTGCAGTGGGGTTAAACGGGTCG | + |
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Preference number: 1 (lower is better) Translates to: FQRGSNSCSVERITS*FSNSATSAVGLNGS Trigger: CGACCCGTTTAACCCCACTGCAGAGGTGGCCGAGTTCGAGAATCAGGATGTGATTCTCTCTACTGAGCAGGAGTTTGACCCCCTCTGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | AGTATTCTCCTTGCTTCAGCACTCAGTTCAGGCTGCAGACCAGCATaGGGCACTGCCTCAGACAGGTCTGTGCTGTCTTGGGTTTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: SILLASALSSGCRPA*GTASDRSVLSWVSC Trigger: ACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | CTCAGTAGAGAGAATCACATCCTGATTCTCGAACTCGGCCACCTCTaGAGTGGGGTTAAACGGGTCGGGCACATCACTGTTTTGCCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LSRENHILILELGHL*SGVKRVGHITVLPE Trigger: CTCAGGCAAAACAGTGATGTGCCCGACCCGTTTAACCCCACTGCAGAGGTGGCCGAGTTCGAGAATCAGGATGTGATTCTCTCTACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | TTTGCAAACCAGGTGGATGATCTTCGGCACGTACTTCAGAAGTCGTaGCTCGTAGCCATGAAGCAGATGTCGCTGGCGAATCAGGTACTG | + |
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Preference number: 1 (lower is better) Translates to: FANQVDDLRHVLQKS*LVAMKQMSLANQVL Trigger: CAGTACCTGATTCGCCAGCGACATCTGCTTCATGGCTACGAGGCACGACTTCTGAAGTACGTGCCGAAGATCATCCACCTGGTTTGCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | ACACGGTCTTTTCGATTTCAGCAGAGAGCACAGGTCCTTCTAGCATaGTCTTCATCACCACTGGCCGGTTCTCAGCCAAGTCAAGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: TRSFRFQQRAQVLLA*SSSPLAGSQPSQAA Trigger: TGCTGCTTGACTTGGCTGAGAACCGGCCAGTGGTGATGAAGAGCATGCTAGAAGGACCTGTGCTCTCTGCTGAAATCGAAAAGACCGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | TCATTCTTGTTGCAAAAACTAAATAACATGCTATTAGCACACCTGTaGGGCCGAGCCCCGCGTGGCAGTGGACAGCCACTTTCCCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: SFLLQKLNNMLLAHL*GRAPRGSGQPLSLP Trigger: AGGAAGGGAAAGTGGCTGTCCACTGCCACGCGGGGCTCGGCCGCACAGGTGTGCTAATAGCATGTTATTTAGTTTTTGCAACAAGAATGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | CAGAGAAGGTTCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTaGACAAAAGCAGCGATCCCTCATCCTTCAGTCCTTCTAAGCCTC | + |
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Preference number: 1 (lower is better) Translates to: QRRFCSAVLPLECPS*TKAAIPHPSVLLSL Trigger: GAGGCTTAGAAGGACTGAAGGATGAGGGATCGCTGCTTTTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAACCTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR CCA 90 bp | GGTATTTTGGACCAGTGCCTCCTTATTAAAACCCAGCTCTGGAGTTaGTGGCATGTAGCAATGGCTCGTGGGCTTCTGATGCTGGAGACT | + |
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Preference number: 1 (lower is better) Translates to: GILDQCLLIKTQLWS*WHVAMARGLLMLET Trigger: AGTCTCCAGCATCAGAAGCCCACGAGCCATTGCTACATGCCACCAACTCCAGAGCTGGGTTTTAATAAGGAGGCACTGGTCCAAAATACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR TCA 90 bp | GGGTTAAACGGGTCGGGCACATCACTGTTTTGCCTGAGTAACTCTTaGTCTAGCTGCAGCGTGACCATCTCAGACACGGTCTTTTCGATT | + |
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Preference number: 1 (lower is better) Translates to: GLNGSGTSLFCLSNS*SSCSVTISDTVFSI Trigger: AATCGAAAAGACCGTGTCTGAGATGGTCACGCTGCAGCTAGATCAAGAGTTACTCAGGCAAAACAGTGATGTGCCCGACCCGTTTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR TCA 90 bp | GTTCCAGGATGGCTTTGGCCCTCTTTAAGTCTGAGTCGCTGTAGCTaGGCTGTCTTTTCAGATGTGTCAGGGGCTGAAGGCACTCAATAT | + |
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Preference number: 1 (lower is better) Translates to: VPGWLWPSLSLSRCS*AVFSDVSGAEGTQY Trigger: ATATTGAGTGCCTTCAGCCCCTGACACATCTGAAAAGACAGCTCAGCTACAGCGACTCAGACTTAAAGAGGGCCAAAGCCATCCTGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | GCTCTCCAGGATTGTGTGAACAAGAAACACCCACAGAGAAGGTTCTaGTCCGCTGTACTTCCTTTGGAATGTCCTTCCTGCACAAAAGCA | + |
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Preference number: 1 (lower is better) Translates to: ALQDCVNKKHPQRRF*SAVLPLECPSCTKA Trigger: TGCTTTTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAACCTTCTCTGTGGGTGTTTCTTGTTCACACAATCCTGGAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR GCA 90 bp | TTGGGGTCACAGCAAGAGAAAATATTACGGAGTGGAGCCAGGAACTaGGTGAATTCCCGTACACAGAGCAGTTGTCCTCTTGTTTGTATG | + |
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Preference number: 1 (lower is better) Translates to: LGSQQEKILRSGARN*VNSRTQSSCPLVCM Trigger: CATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCACGCAGTTCCTGGCTCCACTCCGTAATATTTTCTCTTGCTGTGACCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR TCA 90 bp | CCTGTAAGGCAAATGTCATCACCTTTACCATGTCCAAGATGGCAGTaGGGGAAGCCACGCCATAATCCTTCCACCCAAAGTTGTAGAAAT | + |
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Preference number: 1 (lower is better) Translates to: PVRQMSSPLPCPRWQ*GKPRHNPSTQSCRN Trigger: ATTTCTACAACTTTGGGTGGAAGGATTATGGCGTGGCTTCCCTCACTGCCATCTTGGACATGGTAAAGGTGATGACATTTGCCTTACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR TCA 90 bp | GGTCACAGCAAGAGAAAATATTACGGAGTGGAGCCAGGAACTGCGTaGATTCCCGTACACAGAGCAGTTGTCCTCTTGTTTGTATGGAAT | + |
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Preference number: 1 (lower is better) Translates to: GHSKRKYYGVEPGTA*IPVHRAVVLLFVWN Trigger: ATTCCATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCACGCAGTTCCTGGCTCCACTCCGTAATATTTTCTCTTGCTGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR TCA 90 bp | CTTGCCCGTTCAAGGCTGACAAAAGGCGATGACAAGCATTCTCTTTaGATATCAGCTTTTAGAATGTACACAGGAGACAGAGTGCACGGA | + |
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Preference number: 1 (lower is better) Translates to: LARSRLTKGDDKHSL*ISAFRMYTGDRVHG Trigger: TCCGTGCACTCTGTCTCCTGTGTACATTCTAAAAGCTGATATTCAAAGAGAATGCTTGTCATCGCCTTTTGTCAGCCTTGAACGGGCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR GCA 90 bp | TACACAGAGCAGTTGTCCTCTTGTTTGTATGGAATTGGGGCGTTTTaGCCGAACAAATATAATTGCTTGGTCAGCAGTCATTCTTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: YTEQLSSCLYGIGAF*PNKYNCLVSSHSCC Trigger: GCAACAAGAATGACTGCTGACCAAGCAATTATATTTGTTCGGGCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR TCA 90 bp | AAGGCCTCAATTGCTGATTACCTGTTTAATCTAAAGGAACAAGTTTaGCCAGCCACCTGTCCTTATTTGAAGCCAGTTAGGGTCAAATTC | + |
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Preference number: 1 (lower is better) Translates to: KASIADYLFNLKEQV*PATCPYLKPVRVKF Trigger: GAATTTGACCCTAACTGGCTTCAAATAAGGACAGGTGGCTGGTCAAACTTGTTCCTTTAGATTAAACAGGTAATCAGCAATTGAGGCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR-3UTR GCA 90 bp | GGCCAAGGCAGGCTGAGGCAATGGGCTTATGAAAGGGCAGCTTTGGGGCTGGGCGAAGGATGGTCACACTaGCCCCAGGGAGCAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GQGRLRQWAYERAALGLGEGWSH*PQGAGL Trigger: CAGCCCTGCTCCCTGGGGGCAGTGTGACCATCCTTC...GCCCAGCCCCAAAGCTGCCCTTTCATAAGCCCATTGCCTCAGCCTGCCTTGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR CAA 90 bp | GCAGGCCAAGGCAGGCTGAGGCAATGGGCTTATGAAAGGGCAGCTTaGGGGCTGGGCACAAGCCGGGCAGCAATGCCAGCACTCCTGACA | + |
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Preference number: 2 (lower is better) Translates to: AGQGRLRQWAYERAA*GLGTSRAAMPALLT Trigger: TGTCAGGAGTGCTGGCATTGCTGCCCGGCTTGTGCCCAGCCCCAAAGCTGCCCTTTCATAAGCCCATTGCCTCAGCCTGCCTTGGCCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR CAA 90 bp | CTGCAGACCAGCATGCGGCACTGCCTCAGACAGGTCTGTGCTGTCTaGGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGGACTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LQTSMRHCLRQVCAV*GFLSVWELRLRTGA Trigger: GGCTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGCTGTCTTGGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGGACTGGAGCTCCTGACCATCTCGTaGACAGGGCCCGGGACCCAG | + |
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Preference number: 2 (lower is better) Translates to: SVLSWVSCPCGNCALGLELLTIS*TGPGTQ Trigger: CTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAG...CTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGCTCAGGAGGGGTGGATaGTCAGGTTGGATGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQLRRGG*SGWMLV Trigger: GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAG...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| 3UTR CAA 90 bp | GACAAGGGTCACTTCTGCTCCTTAGCAGCTGCCCATCCTGGCCACTaGTGGTCCGTTTCTCTGTACAGCAGGGACCTGGCTCAGCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: DKGHFCSLAAAHPGH*WSVSLYSRDLAQQQ Trigger: CTGCTGCTGAGCCAGGTCCCTGCTGTACAGAGAAACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTGACCCTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| 3UTR CAA 90 bp | GCCAGCCTCCATGAATGCCTCAGGAAGGTAGGTGAAACCACTTTCTaGTTCCAGAGCGCTCCCACAGCTGGCATGCTCTCCAGGGCGCTG | + |
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Preference number: 2 (lower is better) Translates to: ASLHECLRKVGETTF*FQSAPTAGMLSRAL Trigger: CAGCGCCCTGGAGAGCATGCCAGCTGTGGGAGCGCTCTGGAACAAGAAAGTGGTTTCACCTACCTTCCTGAGGCATTCATGGAGGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGCTGTCTTGGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGGACTGGAGGCCTCACACCGGCAATaGGTGACCTGCTCTGGATCC | + |
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Preference number: 2 (lower is better) Translates to: SVLSWVSCPCGNCALGLEASHRQ*VTCSGS Trigger: GGATCCAGAGCAGGTCACCCATTGCCGGTGTGAGGC...CTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGAAGGTTCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTGCACAAGAGCGCTCCCACAGCTaGCATGCTCTCCAGGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: HREGSAPLYFLWNVLPAQERSHS*HALQGA Trigger: AGCGCCCTGGAGAGCATGCCAGCTGTGGGAGCGCTC...TTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAACCTTCTCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGCTGTCTTGGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGGACTGGAGTGTCCAAGATGGCAGTaGGGGAAGCCACGCCATAAT | + |
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Preference number: 2 (lower is better) Translates to: SVLSWVSCPCGNCALGLECPRWQ*GKPRHN Trigger: ATTATGGCGTGGCTTCCCTCACTGCCATCTTGGACA...CTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR-3UTR GCA 90 bp | TTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCACTCAGTGGCTGCAGACCAGCATaGGGCACTGCCTCAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: FKFARALAASILLASALSGCRPA*GTASDR Trigger: CCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCC...ACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| 3UTR CAA 90 bp | CGGCAATGGGTGACCTGCTCTGGATCCTTATGGATACTTGTGAAGTaGGGCGGCACTGGCTCTCCAGGATTGTGTGAACAAGAAACACCC | + |
|
Preference number: 2 (lower is better) Translates to: RQWVTCSGSLWILVK*GGTGSPGLCEQETP Trigger: GGGTGTTTCTTGTTCACACAATCCTGGAGAGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGGATCCAGAGCAGGTCACCCATTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 90 bp | CAAACTCATTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTaGCTTCAGCACTCAGTTCAGGCTGCAGACCAGCATGCGGCACTG | + |
|
Preference number: 2 (lower is better) Translates to: QTHLSLPGLWPPVFS*LQHSVQAADQHAAL Trigger: CAGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCGGTTGTCTGGAAGCCTaGCAAAGAGCAAGTCTACTT | + |
|
Preference number: 2 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSGCLEA*QRASLL Trigger: AAGTAGACTTGCTCTTTGTCAGGCTTCCAGACAACC...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGCGATCCCTCATCCTTCAGTCCTTCTAAGCCTCCACACTTTGACGGAGTCGCCAGCCTCCATGAATaGCTCAGGAAGGTAGGTGAA | + |
|
Preference number: 2 (lower is better) Translates to: SSDPSSFSPSKPPHFDGVASLHE*LRKVGE Trigger: TTCACCTACCTTCCTGAGGCATTCATGGAGGCTGGC...GACTCCGTCAAAGTGTGGAGGCTTAGAAGGACTGAAGGATGAGGGATCGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 90 bp | CTCTTCATCACCACTGGCCGGTTCTCAGCCAAGTCAAGCAGCAGTTaGCAAACCAGGTGGATGATCTTCGGCACGTACTTCAGAAGTCGT | + |
|
Preference number: 2 (lower is better) Translates to: LFITTGRFSAKSSSS*QTRWMIFGTYFRSR Trigger: ACGACTTCTGAAGTACGTGCCGAAGATCATCCACCTGGTTTGCAAACTGCTGCTTGACTTGGCTGAGAACCGGCCAGTGGTGATGAAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCGTGGCACCAACTTCATaGCGATTTTTCAAGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSVAPTS*RFFKTQ Trigger: CTGTGTCTTGAAAAATCGCCATGAAGTTGGTGCCAC...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR CCA 90 bp | TTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCACTCAGTTGGTCTAGCAACTCCTaGGCAGGCACTGTCCAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FKFARALAASILLASALSWSSNS*AGTVQG Trigger: ACCTTGGACAGTGCCTGCCCAGGAGTTGCTAGACCA...ACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 90 bp | ACGGAGTGGAGCCAGGAACTGCGTGAATTCCCGTACACAGAGCAGTaGTCCTCTTGTTTGTATGGAATTGGGGCGTTTTGCCCGAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: TEWSQELREFPYTEQ*SSCLYGIGAFCPNK Trigger: TTTGTTCGGGCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCACGCAGTTCCTGGCTCCACTCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 90 bp | TGTCGCTGGCGAATCAGGTACTGGGCTAAGGTAACAGCATGTGCTTaGGGGTCACAGCAAGAGAAAATATTACGGAGTGGAGCCAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CRWRIRYWAKVTACA*GSQQEKILRSGARN Trigger: GTTCCTGGCTCCACTCCGTAATATTTTCTCTTGCTGTGACCCCAAAGCACATGCTGTTACCTTAGCCCAGTACCTGATTCGCCAGCGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 90 bp | TCCTTATGGATACTTGTGAAGTTGGGCGGCACTGGCTCTCCAGGATaGTGTGAACAAGAAACACCCACAGAGAAGGTTCTGCTCCGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SLWILVKLGGTGSPG*CEQETPTEKVLLRC Trigger: ACAGCGGAGCAGAACCTTCTCTGTGGGTGTTTCTTGTTCACACAATCCTGGAGAGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR TCA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGAGCTGCTCCCTCCCCTaGCAGCCAAGGGAGAGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: VIRVGEANDGNSFGYTRLSCSLP*QPRERL Trigger: CAACCTCTCCCTTGGCTGTCAGGGGAGGGAGCAGCT...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTGCACAAAAGCAGCGATCCCCTCAGGAAGGTAGGTaGAACCACTTTCTTGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SAPLYFLWNVLPAQKQRSPQEGR*NHFLVP Trigger: TGGAACAAGAAAGTGGTTTCACCTACCTTCCTGAGG...GGATCGCTGCTTTTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR TCA 90 bp | AACTCATTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCAAAATGCCAGCCTCCATaGATGCCTCAGGAAGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NSFKFARALAASILLASAKCQPP*MPQEGR Trigger: CCTACCTTCCTGAGGCATTCATGGAGGCTGGCATTT...TGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTGGGTAAGCCGGTTCATTAACCATCACCGTATTTCCTTTCCCAAGAAGAACCTCAGGAGGGGTGGATaGTCAGGTTGGATGCTTGTC | + |
|
Preference number: 2 (lower is better) Translates to: HWVSRFINHHRISFPKKNLRRGG*SGWMLV Trigger: GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAG...GTTCTTCTTGGGAAAGGAAATACGGTGATGGTTAATGAACCGGCTTACCCAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CAA 90 bp | AAAGCAGCGATCCCTCATCCTTCAGTCCTTCTAAGCCTCCACACTTaGACGGAGTCCAGAAAGAAAAGGTATTTTGGACCAGTGCCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: KAAIPHPSVLLSLHT*TESRKKRYFGPVPP Trigger: AGGAGGCACTGGTCCAAAATACCTTTTCTTTCTGGACTCCGTCAAAGTGTGGAGGCTTAGAAGGACTGAAGGATGAGGGATCGCTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CCA 90 bp | GTATTTTGGACCAGTGCCTCCTTATTAAAACCCAGCTCTGGAGTTGGTGGCATGCCCCTTGTTCCAGGATaGCTTTGGCCCTCTTTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VFWTSASLLKPSSGVGGMPLVPG*LWPSLS Trigger: ACTTAAAGAGGGCCAAAGCCATCCTGGAACAAGGGG...CATGCCACCAACTCCAGAGCTGGGTTTTAATAAGGAGGCACTGGTCCAAAATAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCCGAATCACTGAAAATAATATTCCTTCAAAGACCTGACCACATCTGTAAAGCACTGACAATGGACTaGGGCAGGAAGCGCGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TAESLKIIFLQRPDHICKALTMD*GRKRGQ Trigger: CTGGCCGCGCTTCCTGCCTCAGTCCATTGTCAGTGC...TTTACAGATGTGGTCAGGTCTTTGAAGGAATATTATTTTCAGTGATTCGGCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGCTGTCTTTTCAGATGTGTCAGGGGCTGAAGGCACTCAATATCCCTCCTGGAATTGGGGCGTTTTaGCCGAACAAATATAATTGC | + |
|
Preference number: 2 (lower is better) Translates to: AELSFQMCQGLKALNIPPGIGAF*PNKYNC Trigger: GCAATTATATTTGTTCGGGCAAAACGCCCCAATTCC...AGGAGGGATATTGAGTGCCTTCAGCCCCTGACACATCTGAAAAGACAGCTCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTAGTTACCACCTTTGTCAAGAAAACTATTATGGCATGGGCTCTGCTACTCAGAAAGTGGCTGGCCTaGCTTACTCTAGCTCTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: GLVTTFVKKTIMAWALLLRKWLA*LTLALS Trigger: GCTCAGAGCTAGAGTAAGCCAGGCCAGCCACTTTCT...GAGTAGCAGAGCCCATGCCATAATAGTTTTCTTGACAAAGGTGGTAACTAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR CCA 90 bp | TGTGTGAACAAGAAACACCCACAGAGAAGGTTCTGCTCCGCTGTACTTCCTTTGTGGCGAATCAGGTACTaGGCTAAGGTAACAGCATGT | + |
|
Preference number: 2 (lower is better) Translates to: CVNKKHPQRRFCSAVLPLWRIRY*AKVTAC Trigger: ACATGCTGTTACCTTAGCCCAGTACCTGATTCGCCA...CAAAGGAAGTACAGCGGAGCAGAACCTTCTCTGTGGGTGTTTCTTGTTCACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR GCA 90 bp | CACGTACTTCAGAAGTCGTGCCTCGTAGCCATGAAGCAGATGTCGCTGGCGAATCCGAACAAATATAATTaGTTGGTCAGCAGTCATTCT | + |
|
Preference number: 2 (lower is better) Translates to: HVLQKSCLVAMKQMSLANPNKYN*LVSSHS Trigger: AGAATGACTGCTGACCAAGCAATTATATTTGTTCGG...ATTCGCCAGCGACATCTGCTTCATGGCTACGAGGCACGACTTCTGAAGTACGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CCA 90 bp | GTATTTCCTTTCCCAAGAAGAACATTCATGGTGAAGGAAATTGCACTTGGCTTTTGGCTCAGCAGCAGGTaGGGGAAGCAGGATAAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: VFPFPRRTFMVKEIALGFWLSSR*GKQDKV Trigger: GACCTTATCCTGCTTCCCCCACCTGCTGCTGAGCCA...AAAGCCAAGTGCAATTTCCTTCACCATGAATGTTCTTCTTGGGAAAGGAAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR CCA 90 bp | GGTCTAGTTACCACCTTTGTCAAGAAAACTATTATGGCATGGGCTCTGCTACTCACTCCTGACAGAAAGTaGCTGGCCTGGCTTACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: GLVTTFVKKTIMAWALLLTPDRK*LAWLTL Trigger: TAGAGTAAGCCAGGCCAGCCACTTTCTGTCAGGAGT...GAGTAGCAGAGCCCATGCCATAATAGTTTTCTTGACAAAGGTGGTAACTAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CAA 90 bp | GTGAATTCCCGTACACAGAGCAGTTGTCCTCTTGTTTGTATGGAATaGGGGCGTTTTGCCCGAACAAATATAATTGCTTGGTCAGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VNSRTQSSCPLVCME*GRFARTNIIAWSAV Trigger: GACTGCTGACCAAGCAATTATATTTGTTCGGGCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 90 bp | CAGGAACTGCGTGAATTCCCGTACACAGAGCAGTTGTCCTCTTGTTaGTATGGAATTGGGGCGTTTTGCCCGAACAAATATAATTGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QELREFPYTEQLSSC*YGIGAFCPNKYNCL Trigger: CAAGCAATTATATTTGTTCGGGCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCACGCAGTTCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR GCA 90 bp | CAGCACATGACGGTGCCAGAACTTAAAACAAATGTTGCAAATGCACAGGCGCACTTATGGCATGGGCTCTaGTACTCCTATGTATTAATT | + |
|
Preference number: 2 (lower is better) Translates to: QHMTVPELKTNVANAQAHLWHGL*YSYVLI Trigger: AATTAATACATAGGAGTAGCAGAGCCCATGCCATAA...GTGCGCCTGTGCATTTGCAACATTTGTTTTAAGTTCTGGCACCGTCATGTGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR CCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAGTGGCACCAACTTCATaGCGATTTTTCAAGACACAG | + |
|
Preference number: 2 (lower is better) Translates to: IFLREGTHVLGRIHSEVLVAPTS*RFFKTQ Trigger: CTGTGTCTTGAAAAATCGCCATGAAGTTGGTGCCAC...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR CAA 90 bp | TGGCTTTTGTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTaGGATACACTAGACTGTAATTCAGAAATGCATGAGTTAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: WLLSSELVRLMMEIV*DTLDCNSEMHELGK Trigger: TTTCCCTAACTCATGCATTTCTGAATTACAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGACAAAAGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR TCA 72 bp | CATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTaGGGCAGGAAGCGCGGCCAGCACTGGTCCTCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: HPQPREAALTMD*GRKRGQHWSSG Trigger: CCCCGAGGACCAGTGCTGGCCGCGCTTCCTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR TCA 72 bp | CAGTTCAGAGGGCTACAGGGGCTCCTGACCATCTCGTaGACAGGGCCCGGGACCCAGCCACCAGGAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: QFRGLQGLLTIS*TGPGTQPPGAS Trigger: TGAGGCTCCTGGTGGCTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAGCCCCTGTAGCCCTCTGAACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | GACTGGAGCCACAGTTCAGAGGGCTACAGGGGCTCCTaGCCATCTCGTGAACAGGGCCCGGGACCCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: DWSHSSEGYRGS*PSREQGPGPSH Trigger: GTGGCTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAGCCCCTGTAGCCCTCTGAACTGTGGCTCCAGTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | GTGGCTGGCCTGGCTTACTCTAGCTCTGAGCGCCTGTaGAGGATGGTCACACTGCCCCCAGGGAGCAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VAGLAYSSSERL*RMVTLPPGSRA Trigger: AGCCCTGCTCCCTGGGGGCAGTGTGACCATCCTTCACAGGCGCTCAGAGCTAGAGTAAGCCAGGCCAGCCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CCA 72 bp | GCCTGGCTTACTCTAGCTCTGAGCGCCTGTGAAGGATaGTCACACTGCCCCCAGGGAGCAGGGCTGGCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AWLTLALSACEG*SHCPQGAGLAR Trigger: CCTAGCCAGCCCTGCTCCCTGGGGGCAGTGTGACCATCCTTCACAGGCGCTCAGAGCTAGAGTAAGCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR TCA 72 bp | GCAAATGCACAGGCGCACTGGCTTCAGGGAGGGAGGTaGCCGAGGTCCACAGTGTCACTTGCCCGTTCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ANAQAHWLQGGR*PRSTVSLARSR Trigger: CCTTGAACGGGCAAGTGACACTGTGGACCTCGGTCACCTCCCTCCCTGAAGCCAGTGCGCCTGTGCATTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR GCA 72 bp | GCAGACCAGCATGCGGCACTGCCTCAGACAGGTCTGTaGTGTCTTGGGTTTCCTGTCCGTGTGGGAACTGCG | + |
|
Preference number: 3 (lower is better) Translates to: ADQHAALPQTGL*CLGFPVRVGTA Trigger: CGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | CATGCTATTAGCACACCTGTGCGGCCGAGCCCCGCGTaGCAGTGGACAGCCACTTTCCCTTCCTGTAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HAISTPVRPSPA*QWTATFPSCKA Trigger: TGCCTTACAGGAAGGGAAAGTGGCTGTCCACTGCCACGCGGGGCTCGGCCGCACAGGTGTGCTAATAGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | CCCGGGACCCAGCCACCAGGAGCCTCACACCGGCAATaGGTGACCTGCTCTGGATCCTTATGGATACTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PGTQPPGASHRQ*VTCSGSLWILV Trigger: CACAAGTATCCATAAGGATCCAGAGCAGGTCACCCATTGCCGGTGTGAGGCTCCTGGTGGCTGGGTCCCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | AAGCCGGGCAGCAATGCCAGCACTCCTGACAGAAAGTaGCTGGCCTGGCTTACTCTAGCTCTGAGCGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: KPGSNASTPDRK*LAWLTLALSAC Trigger: ACAGGCGCTCAGAGCTAGAGTAAGCCAGGCCAGCCACTTTCTGTCAGGAGTGCTGGCATTGCTGCCCGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CCA 72 bp | GCATGCGGCACTGCCTCAGACAGGTCTGTGCTGTCTTaGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ACGTASDRSVLS*VSCPCGNCALG Trigger: TCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGGTCACTTCTGCTCCTTAGCAGCTGCCCATCCTGGCCACTTGTGGTCCGTGATAAGGTCTCTGGGTaGAGAGCTGCTCCCTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: QGSLLLLSSCPSWPLVVRDKVSG*RAAPSP Trigger: AGGGGAGGGAGCAGCTCTCAACCCAGAGACCTTATC...ACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTGACCCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR GCA 72 bp | TGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTaGACAGTCCGGGGAGGACAAGGGTCACTTCTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: WLGAVPWYCCLF*TVRGGQGSLLL Trigger: GAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR GCA 72 bp | AGCACTCAGTTCAGGCTGCAGACCAGCATGCGGCACTaGCTCAGACAGGTCTGTGCTGTCTTGGGTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: STQFRLQTSMRH*LRQVCAVLGFL Trigger: CAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | TTCTGCTCCTTAGCAGCTGCCCATCCTGGCCACTTGTaGTCCGTTTCTCTGTACAGCAGGGACCTGGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FCSLAAAHPGHL*SVSLYSRDLAQ Trigger: CTGAGCCAGGTCCCTGCTGTACAGAGAAACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CCA 72 bp | ACTAGCAACAGAGCAGGCCAAGGCAGGCTGAGGCAATaGGCTTATGAAAGGGCAGCTTTGGGGCTGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: TSNRAGQGRLRQ*AYERAALGLGT Trigger: TGTGCCCAGCCCCAAAGCTGCCCTTTCATAAGCCCATTGCCTCAGCCTGCCTTGGCCTGCTCTGTTGCTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR GCA 72 bp | GCCAGTATTCTCCTTGCTTCAGCACTCAGTTCAGGCTaGAGACCAGCATGCGGCACTGCCTCAGACAGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASILLASALSSG*RPACGTASDRS Trigger: AGACCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | AGCAATGCCAGCACTCCTGACAGAAAGTGGCTGGCCTaGCTTACTCTAGCTCTGAGCGCCTGTGAAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: SNASTPDRKWLA*LTLALSACEGW Trigger: CCATCCTTCACAGGCGCTCAGAGCTAGAGTAAGCCAGGCCAGCCACTTTCTGTCAGGAGTGCTGGCATTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CCA 72 bp | CAGGCACTGTCCAAGGTGTCTCCCCTTGTTCCAGGATaGCTTTGGCCCTCTTTAAGTCTGAGTCGCTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: QALSKVSPLVPG*LWPSLSLSRCS Trigger: GCTACAGCGACTCAGACTTAAAGAGGGCCAAAGCCATCCTGGAACAAGGGGAGACACCTTGGACAGTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | CCAGCTCTGGAGTTGGTGGCATGTAGCAATGGCTCGTaGGCTTCTGATGCTGGAGACTGTGGTCTAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: PALELVACSNGS*ASDAGDCGLAT Trigger: AGTTGCTAGACCACAGTCTCCAGCATCAGAAGCCCACGAGCCATTGCTACATGCCACCAACTCCAGAGCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | TCACACCGGCAATGGGTGACCTGCTCTGGATCCTTATaGATACTTGTGAAGTTGGGCGGCACTGGCTCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SHRQWVTCSGSL*ILVKLGGTGSP Trigger: TGGAGAGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGGATCCAGAGCAGGTCACCCATTGCCGGTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | GGGTCGGGCACATCACTGTTTTGCCTGAGTAACTCTTaGTCTAGCTGCAGCGTGACCATCTCAGACACGGTC | + |
|
Preference number: 3 (lower is better) Translates to: GSGTSLFCLSNS*SSCSVTISDTV Trigger: GACCGTGTCTGAGATGGTCACGCTGCAGCTAGATCAAGAGTTACTCAGGCAAAACAGTGATGTGCCCGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | TGTGAAGTTGGGCGGCACTGGCTCTCCAGGATTGTGTaGACAAGAAACACCCACAGAGAAGGTTCTGCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: CEVGRHWLSRIV*TRNTHREGSAP Trigger: CGGAGCAGAACCTTCTCTGTGGGTGTTTCTTGTTCACACAATCCTGGAGAGCCAGTGCCGCCCAACTTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR GCA 72 bp | CAGGTGGATGATCTTCGGCACGTACTTCAGAAGTCGTaGCTCGTAGCCATGAAGCAGATGTCGCTGGCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: QVDDLRHVLQKS*LVAMKQMSLAN Trigger: ATTCGCCAGCGACATCTGCTTCATGGCTACGAGGCACGACTTCTGAAGTACGTGCCGAAGATCATCCACCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR GCA 72 bp | GAGAATCACATCCTGATTCTCGAACTCGGCCACCTCTaGAGTGGGGTTAAACGGGTCGGGCACATCACTGTT | + |
|
Preference number: 3 (lower is better) Translates to: ENHILILELGHL*SGVKRVGHITV Trigger: AACAGTGATGTGCCCGACCCGTTTAACCCCACTGCAGAGGTGGCCGAGTTCGAGAATCAGGATGTGATTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTCCTGGGCAGGCACTGTCCAAGGTGTCTCCCCTTGTTCCAGGATGGCTTTGAAGTCAAGCAGCAGTTaGCAAACCAGGTGGATGATC | + |
|
Preference number: 3 (lower is better) Translates to: NSWAGTVQGVSPCSRMALKSSSS*QTRWMI Trigger: GATCATCCACCTGGTTTGCAAACTGCTGCTTGACTT...CAAAGCCATCCTGGAACAAGGGGAGACACCTTGGACAGTGCCTGCCCAGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | GACAGCGTCTCCTCAGGCTGCTGTATTTGGATTTTCTaGCATGCAGTGGTGTCAGCACATGACGGTGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: DSVSSGCCIWIF*HAVVSAHDGAR Trigger: TCTGGCACCGTCATGTGCTGACACCACTGCATGTCAGAAAATCCAAATACAGCAGCCTGAGGAGACGCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR TCA 72 bp | CAGCCAAGTCAAGCAGCAGTTTGCAAACCAGGTGGATaGTCTTCGGCACGTACTTCAGAAGTCGTGCCTCGT | + |
|
Preference number: 3 (lower is better) Translates to: QPSQAAVCKPGG*SSARTSEVVPR Trigger: ACGAGGCACGACTTCTGAAGTACGTGCCGAAGATCATCCACCTGGTTTGCAAACTGCTGCTTGACTTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | GGGTCAAACTCCTGCTCAGTAGAGAGAATCACATCCTaGTTCTCGAACTCGGCCACCTCTGCAGTGGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: GSNSCSVERITS*FSNSATSAVGL Trigger: TAACCCCACTGCAGAGGTGGCCGAGTTCGAGAATCAGGATGTGATTCTCTCTACTGAGCAGGAGTTTGACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | TGGCTTTGGCCCTCTTTAAGTCTGAGTCGCTGTAGCTaGGCTGTCTTTTCAGATGTGTCAGGGGCTGAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: WLWPSLSLSRCS*AVFSDVSGAEG Trigger: GCCTTCAGCCCCTGACACATCTGAAAAGACAGCTCAGCTACAGCGACTCAGACTTAAAGAGGGCCAAAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTCATTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCACCAAGGTGTCTCCCCTaGTTCCAGGATGGCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: NSFKFARALAASILLASAPRCLP*FQDGFG Trigger: GCCAAAGCCATCCTGGAACAAGGGGAGACACCTTGG...TGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGAAGGTTCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTGCACAAAACCCAGCTCTGGAGTaGGTGGCATGTAGCAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: HREGSAPLYFLWNVLPAQNPALE*VACSNG Trigger: GCCATTGCTACATGCCACCAACTCCAGAGCTGGGTT...TTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAACCTTCTCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CCA 72 bp | TTCTCAGCCAAGTCAAGCAGCAGTTTGCAAACCAGGTaGATGATCTTCGGCACGTACTTCAGAAGTCGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: FSAKSSSSLQTR*MIFGTYFRSRA Trigger: GGCACGACTTCTGAAGTACGTGCCGAAGATCATCCACCTGGTTTGCAAACTGCTGCTTGACTTGGCTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTGGGTAAGCCGGTTCATTAACCATCACCGTATTTCCTTTCCCAAGAAGAACCAGCCAAGGGAGAGGTaGTCTGGAAGCCTGACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: HWVSRFINHHRISFPKKNQPRER*SGSLTK Trigger: CTTTGTCAGGCTTCCAGACAACCTCTCCCTTGGCTG...GTTCTTCTTGGGAAAGGAAATACGGTGATGGTTAATGAACCGGCTTACCCAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR GCA 72 bp | TTCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTaGACAAAAGCAGCGATCCCTCATCCTTCAGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FCSAVLPLECPS*TKAAIPHPSVL Trigger: AAGGACTGAAGGATGAGGGATCGCTGCTTTTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCACTCAGTCCGTACACAGAGCAGTaGTCCTCTTGTTTGTATGGA | + |
|
Preference number: 3 (lower is better) Translates to: FKFARALAASILLASALSPYTEQ*SSCLYG Trigger: TCCATACAAACAAGAGGACAACTGCTCTGTGTACGG...ACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | AACACCCACAGAGAAGGTTCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTGTAACAGCATGTGCTTaGGGGTCACAGCAAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NTHREGSAPLYFLWNVLPVTACA*GSQQEK Trigger: TTTCTCTTGCTGTGACCCCAAAGCACATGCTGTTAC...AGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAACCTTCTCTGTGGGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTCATTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCATCCGCTGTACTTCCTTaGGAATGTCCTTCCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: NSFKFARALAASILLASASAVLP*ECPSCT Trigger: TGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGA...TGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | GACCGAGGTCCACAGTGTCACTTGCCCGTTCAAGGCTaGCAAAAGGCGATGACAAGCATTCTCTTTGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: DRGPQCHLPVQG*QKAMTSILFEY Trigger: ATATTCAAAGAGAATGCTTGTCATCGCCTTTTGTCAGCCTTGAACGGGCAAGTGACACTGTGGACCTCGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR TCA 72 bp | CAAATGTCATCACCTTTACCATGTCCAAGATGGCAGTaGGGGAAGCCACGCCATAATCCTTCCACCCAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: QMSSPLPCPRWQ*GKPRHNPSTQS Trigger: ACTTTGGGTGGAAGGATTATGGCGTGGCTTCCCTCACTGCCATCTTGGACATGGTAAAGGTGATGACATTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR GCA 72 bp | CAGCAAGAGAAAATATTACGGAGTGGAGCCAGGAACTaGGTGAATTCCCGTACACAGAGCAGTTGTCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QQEKILRSGARN*VNSRTQSSCPL Trigger: AAGAGGACAACTGCTCTGTGTACGGGAATTCACGCAGTTCCTGGCTCCACTCCGTAATATTTTCTCTTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGAAGGTTCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTGCACAACAGTTGTCCTCTTGTTaGTATGGAATTGGGGCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HREGSAPLYFLWNVLPAQQLSSC*YGIGAF Trigger: AAACGCCCCAATTCCATACAAACAAGAGGACAACTG...TTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGAACCTTCTCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTCATTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCACTAAGCCTCCACACTTaGACGGAGTCCAGAAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: NSFKFARALAASILLASALSLHT*TESRKK Trigger: TTTCTTTCTGGACTCCGTCAAAGTGTGGAGGCTTAG...TGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR TCA 72 bp | AATCCGACCCACTCCAGCCAGTCTGCTAAGGTAAGCTaGACTGCCGAATCACTGAAAATAATATTCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NPTHSSQSAKVS*TAESLKIIFLQ Trigger: TTGAAGGAATATTATTTTCAGTGATTCGGCAGTTCAGCTTACCTTAGCAGACTGGCTGGAGTGGGTCGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGGAGGGGACACATGTCTaGGGAAGGATACATAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VIRVGEANDGNSFGYTRLEGTHV*GRIHSE Trigger: TTCACTATGTATCCTTCCCAAGACATGTGTCCCCTC...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR TCA 72 bp | TTTAAGACACTTGGTGACTATCTTAGGTCATATTTCTaGGGGAGGGGACACATGTCTTGGGAAGGATACATA | + |
|
Preference number: 3 (lower is better) Translates to: FKTLGDYLRSYF*GRGHMSWEGYI Trigger: TATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATATGACCTAAGATAGTCACCAAGTGTCTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR TCA 72 bp | TCAAGGCTGACAAAAGGCGATGACAAGCATTCTCTTTaGATATCAGCTTTTAGAATGTACACAGGAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SRLTKGDDKHSL*ISAFRMYTGDR Trigger: TCTGTCTCCTGTGTACATTCTAAAAGCTGATATTCAAAGAGAATGCTTGTCATCGCCTTTTGTCAGCCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR TCA 72 bp | TATTTGGATTTTCTGACATGCAGTGGTGTCAGCACATaGCGGTGCCAGAACTTAAAACAAATGTTGCAAATG | + |
|
Preference number: 3 (lower is better) Translates to: YLDFLTCSGVST*RCQNLKQMLQM Trigger: CATTTGCAACATTTGTTTTAAGTTCTGGCACCGTCATGTGCTGACACCACTGCATGTCAGAAAATCCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCTCCTGACCATCTCGTaGACAGGGCCCGGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLLLTIS*TGPGTQ Trigger: CTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGGGCTGCAGACCAGCATaGGGCACTGCCTCAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGGCRPA*GTASDR Trigger: CCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCC...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCGAGCGCTCCCACAGCTaGCATGCTCTCCAGGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLERSHS*HALQGA Trigger: AGCGCCCTGGAGAGCATGCCAGCTGTGGGAGCGCTC...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTCCCCTCTGTCCGGCTaGCAGAAGACACAGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGSPLSG*QKTQPP Trigger: TGGTGGCTGTGTCTTCTGTCAGCCGGACAGAGGGGA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGAGGACAGCAGTTTGGTaGCAGAGCCAGAGCCACGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGRTAVW*QSQSHA Trigger: GGCGTGGCTCTGGCTCTGCCACCAAACTGCTGTCCT...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGGCACTCAGTTCAGGCTaGAGACCAGCATGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGALSSG*RPACGT Trigger: AGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGC...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTCCCACCACACGCCATaGAACATGCCATGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGSHHTP*NMPCAQ Trigger: CTGGGCACATGGCATGTTCCATGGCGTGTGGTGGGA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCGCACTCAGTTCAGGCTaGAGACCAGCATGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLALSSG*RPACGT Trigger: AGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGC...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTCCATGGGAAGCGTCTaGAGGCTCACTATGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGSMGSV*RLTMQC Trigger: GCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCTCACTCCAGCGGGCTaGGTTCTCATACTTACACGC | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGLTPAG*VLILTR Trigger: GCGTGTAAGTATGAGAACCCAGCCCGCTGGAGTGAG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTGGTCTAGCAACTCCTaGGCAGGCACTGTCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGWSSNS*AGTVQG Trigger: ACCTTGGACAGTGCCTGCCCAGGAGTTGCTAGACCA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGGAGAGAATCACATCCTaGTTCTCGAACTCGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGERITS*FSNSAT Trigger: GGTGGCCGAGTTCGAGAATCAGGATGTGATTCTCTC...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCCTTATGGATACTTGTaGAGTTGGGCGGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGPYGYL*SWAALA Trigger: AGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCATGGAACATGCCATGTaGCCAGGGATGACATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLMEHAM*PGMTCR Trigger: GCGGCATGTCATCCCTGGGCACATGGCATGTTCCAT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCACTCCCTTAATGGCTTaGTCCTGCTCACTCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLTPLMA*SCSLQR Trigger: CCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGAGT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGGCCAGCCTCCATGAATaGCTCAGGAAGGTAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGASLHE*LRKVGE Trigger: TTCACCTACCTTCCTGAGGCATTCATGGAGGCTGGC...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCCTCAGACAGGTCTGTaGTGTCTTGGGTTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGPQTGL*CLGFPV Trigger: GACAGGAAACCCAAGACAGCACAGACCTGTCTGAGG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCTCACTCCAGCGGGCTaGGTTCTCATACTTACACGC | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLLTPAG*VLILTR Trigger: GCGTGTAAGTATGAGAACCCAGCCCGCTGGAGTGAG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGACAGCCACCATCACCTaGAGAGAAGATGAGGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGTATIT*REDEDS Trigger: GCTGTCCTCATCTTCTCTCCAGGTGATGGTGGCTGT...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCTGTCCAAGATGGCAGTaGGGGAAGCCACGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLCPRWQ*GKPRHN Trigger: ATTATGGCGTGGCTTCCCTCACTGCCATCTTGGACA...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCTGAGTCGCTGTAGCTaGGCTGTCTTTTCAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGLSRCS*AVFSDV Trigger: CACATCTGAAAAGACAGCTCAGCTACAGCGACTCAG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTCCATGTGTGCAGCATaGCCACTGCTATTCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGSMCAA*PLLFTN Trigger: GTTGGTGAATAGCAGTGGGCATGCTGCACACATGGA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCCTCAGACAGGTCTGTaGTGTCTTGGGTTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLPQTGL*CLGFPV Trigger: GACAGGAAACCCAAGACAGCACAGACCTGTCTGAGG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTGGATCTTCATTCTGTaGCAAGACTCCTGCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGWIFIL*QDSCGH Trigger: ATGGCCGCAGGAGTCTTGCCACAGAATGAAGATCCA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 |
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| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCCCCTTGTTCCAGGATaGCTTTGGCCCTCTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGPLVPG*LWPSLS Trigger: ACTTAAAGAGGGCCAAAGCCATCCTGGAACAAGGGG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGTTTGCCAGGGCTTTaGCCGCCAGTATTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLSLPGL*PPVFSL Trigger: CAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCCTCAGGAAGGTAGGTaGAACCACTTTCTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGPQEGR*NHFLVP Trigger: TGGAACAAGAAAGTGGTTTCACCTACCTTCCTGAGG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCTCTCCAGGATTGTGTaGACAAGAAACACCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGLSRIV*TRNTHR Trigger: TCTGTGGGTGTTTCTTGTTCACACAATCCTGGAGAG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTCCTGACCATCTCGTaGACAGGGCCCGGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVLLTIS*TGPGTQ Trigger: CTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCGCCAGTATTCTCCTTaGTTCAGCACTCAGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLRQYSP*FSTQFR Trigger: CCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCGAGCGCTCCCACAGCTaGCATGCTCTCCAGGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVERSHS*HALQGA Trigger: AGCGCCCTGGAGAGCATGCCAGCTGTGGGAGCGCTC...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCGAGCGCTCCCACAGCTaGCATGCTCTCCAGGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSERSHS*HALQGA Trigger: AGCGCCCTGGAGAGCATGCCAGCTGTGGGAGCGCTC...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTGGCGAATCAGGTACTaGGCTAAGGTAACAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGWRIRY*AKVTAC Trigger: ACATGCTGTTACCTTAGCCCAGTACCTGATTCGCCA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCGGACTGGGTCAGAAGTaGAGTGCCGGCGGCCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVGLGQK*SAGGPA Trigger: TGCAGGGCCGCCGGCACTCCACTTCTGACCCAGTCC...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCCTCAGGAAGGTAGGTaGAACCACTTTCTTGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLPQEGR*NHFLVP Trigger: TGGAACAAGAAAGTGGTTTCACCTACCTTCCTGAGG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTGCTCTCCAGGGCGCTaGAGGTTGATTATTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGCSPGR*RLIIVF Trigger: AAAAACAATAATCAACCTGCAGCGCCCTGGAGAGCA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCGGCTGCAGACCAGCATaGGGCACTGCCTCAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVGCRPA*GTASDR Trigger: CCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCC...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCACAGGCTCTTTCAGTTaGTCAACCCAAGACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLTGSFS*STQDHI Trigger: GATGTGGTCTTGGGTTGAGCAACTGAAAGAGCCTGT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCTGAATTTTCAAGAATaGAGCAGGAGAGCCCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGLNFQE*SRRAQK Trigger: CTTCTGGGCTCTCCTGCTGCATTCTTGAAAATTCAG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCGGGTCAGAAGTGGAGTaGCGGCGGCCCTGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVGSEVE*RRPCRK Trigger: CTTTCTGCAGGGCCGCCGGCACTCCACTTCTGACCC...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGTTTGCAAACCAGGTaGATGATCTTCGGCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLSLQTR*MIFGTY Trigger: GTACGTGCCGAAGATCATCCACCTGGTTTGCAAACT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCAGGGCGCTGCAGGTTaGTTATTGTTTTTATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLQGAAG*LLFLCL Trigger: AAGGCATAAAAACAATAATCAACCTGCAGCGCCCTG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCGCAGGATGGACTCTCTaGGGGGCTCAGCGAGCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSAGWTL*GAQRAL Trigger: TAGAGCTCGCTGAGCCCCTCAGAGAGTCCATCCTGC...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGACCAGCATGCGGCACTaGCTCAGACAGGTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQTSMRH*LRQVCA Trigger: AGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGTCCCACCACACGCCATaGAACATGCCATGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQSHHTP*NMPCAQ Trigger: CTGGGCACATGGCATGTTCCATGGCGTGTGGTGGGA...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGTTGTTTGTATGGAATTaGGGCGTTTTGCCCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGLFVWN*GVLPEQ Trigger: TTGTTCGGGCAAAACGCCCCAATTCCATACAAACAA...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCGCCTCACACCGGCAATaGGTGACCTGCTCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVASHRQ*VTCSGS Trigger: GGATCCAGAGCAGGTCACCCATTGCCGGTGTGAGGC...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | TGCGGCCGAGCCCCGCGTGGCAGTGGACAGCCACTTTCCCTTCCTGTAAGGCAAATGGAACATGCCATGTaGCCAGGGATGACATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CGRAPRGSGQPLSLPVRQMEHAM*PGMTCR Trigger: GCGGCATGTCATCCCTGGGCACATGGCATGTTCCAT...TTGCCTTACAGGAAGGGAAAGTGGCTGTCCACTGCCACGCGGGGCTCGGCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGATGGAACATGCCATGTaGCCAGGGATGACATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQMEHAM*PGMTCR Trigger: GCGGCATGTCATCCCTGGGCACATGGCATGTTCCAT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCTTAATGGCTTGCTCCTaGTCACTCCAGCGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVLMACS*SLQRAG Trigger: CCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAA...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGACTCCCTTAATGGCTTaGTCCTGCTCACTCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQTPLMA*SCSLQR Trigger: CCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGAGT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCGGAATTGGGGCGTTTTaGCCGAACAAATATAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLGIGAF*PNKYNC Trigger: GCAATTATATTTGTTCGGGCAAAACGCCCCAATTCC...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR GCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCACCAGCATGCGGCACTaGCTCAGACAGGTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVTSMRH*LRQVCA Trigger: AGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGT...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTTCCTCCACCTCCATaGGAAGCGTCTGCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVLPPPP*EASAGS Trigger: TGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGAAATGCCAGCCTCCATaGATGCCTCAGGAAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQKCQPP*MPQEGR Trigger: CCTACCTTCCTGAGGCATTCATGGAGGCTGGCATTT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR TCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGGAGAGAATCACATCCTaGTTCTCGAACTCGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQERITS*FSNSAT Trigger: GGTGGCCGAGTTCGAGAATCAGGATGTGATTCTCTC...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGGAATTTAGTTCTTTCTaGCACATCTCCACTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGEFSSF*HISTFL Trigger: AAGGAAAGTGGAGATGTGGCAGAAAGAACTAAATTC...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTCCATGGGAAGCGTCTaGAGGCTCACTATGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSSMGSV*RLTMQC Trigger: GCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGA...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCTGGTCTAGCAACTCCTaGGCAGGCACTGTCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVWSSNS*AGTVQG Trigger: ACCTTGGACAGTGCCTGCCCAGGAGTTGCTAGACCA...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCAGGTCTGTGCTGTCTTaGGTTTCCTGTCCGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVRSVLS*VSCPCG Trigger: CCCACACGGACAGGAAACCCAAGACAGCACAGACCT...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| 3UTR CAA 72 bp | AGCATGCGGCACTGCCTCAGACAGGTCTGTGCTGTCTaGGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SMRHCLRQVCAV*GFLSVWELRLR Trigger: CCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGACCTGTCTGAGGCAGTGCCGCATGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCAAATGCCAGCCTCCATaGATGCCTCAGGAAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSKCQPP*MPQEGR Trigger: CCTACCTTCCTGAGGCATTCATGGAGGCTGGCATTT...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTGTCCAAGATGGCAGTaGGGGAAGCCACGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSCPRWQ*GKPRHN Trigger: ATTATGGCGTGGCTTCCCTCACTGCCATCTTGGACA...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGCTGAGTCGCTGTAGCTaGGCTGTCTTTTCAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQLSRCS*AVFSDV Trigger: CACATCTGAAAAGACAGCTCAGCTACAGCGACTCAG...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCTTATGGATACTTGTaGAGTTGGGCGGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVPYGYL*SWAALA Trigger: AGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGGTGCAGCATGCCCACTaGTATTCACCAACGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQVQHAH*YSPTWN Trigger: ATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCAC...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGGTACTTCAGAAGTCGTaGCTCGTAGCCATGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQVLQKS*LVAMKQ Trigger: CTGCTTCATGGCTACGAGGCACGACTTCTGAAGTAC...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCAGGTCCTTCTAGCATaGTCTTCATCACCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVQVLLA*SSSPLA Trigger: GGCCAGTGGTGATGAAGAGCATGCTAGAAGGACCTG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCGAATTTAGTTCTTTCTaGCACATCTCCACTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLEFSSF*HISTFL Trigger: AAGGAAAGTGGAGATGTGGCAGAAAGAACTAAATTC...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CTGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGTGGTCTAGCAACTCCTaGGCAGGCACTGTCCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LARSCALVLLSFLHSPGRWSSNS*AGTVQG Trigger: ACCTTGGACAGTGCCTGCCCAGGAGTTGCTAGACCA...CCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR TCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGCTCTCCAGGATTGTGTaGACAAGAAACACCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQLSRIV*TRNTHR Trigger: TCTGTGGGTGTTTCTTGTTCACACAATCCTGGAGAG...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCGTACTTCAGAAGTCGTaGCTCGTAGCCATGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSVLQKS*LVAMKQ Trigger: CTGCTTCATGGCTACGAGGCACGACTTCTGAAGTAC...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGTTGGAATGTCCTTCCTaGACAAAAGCAGCGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQLECPS*TKAAIP Trigger: AGGGATCGCTGCTTTTGTGCAGGAAGGACATTCCAA...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GGCCAAGGCAGGCTGAGGCAATGGGCTTATGAAAGGGCAGCTTTGGGGCTGGGCCGCCAGTATTCTCCTTaGTTCAGCACTCAGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GQGRLRQWAYERAALGLGRQYSP*FSTQFR Trigger: CCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCG...GCCCAGCCCCAAAGCTGCCCTTTCATAAGCCCATTGCCTCAGCCTGCCTTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCGCCAGTATTCTCCTTaGTTCAGCACTCAGTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSRQYSP*FSTQFR Trigger: CCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGACAGGCTCTTTCAGTTaGTCAACCCAAGACCACATC | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQTGSFS*STQDHI Trigger: GATGTGGTCTTGGGTTGAGCAACTGAAAGAGCCTGT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGTCACTTCTGCTCCTTAGCAGCTGCCCATCCTGGCCACTTGTGGTCCGTTCCATGGGAAGCGTCTaGAGGCTCACTATGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGSLLLLSSCPSWPLVVRSMGSV*RLTMQC Trigger: GCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGA...ACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTGACCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | TCTGTGCTGTCTTGGGTTTCCTGTCCGTGTGGGAACTGCGCCTTAGGACTGGAGTCCCACCACACGCCATaGAACATGCCATGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVLSWVSCPCGNCALGLESHHTP*NMPCAQ Trigger: CTGGGCACATGGCATGTTCCATGGCGTGTGGTGGGA...CTCCAGTCCTAAGGCGCAGTTCCCACACGGACAGGAAACCCAAGACAGCACAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGTGGCGAATCAGGTACTaGGCTAAGGTAACAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQWRIRY*AKVTAC Trigger: ACATGCTGTTACCTTAGCCCAGTACCTGATTCGCCA...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGAGTTTGCAAACCAGGTaGATGATCTTCGGCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQSLQTR*MIFGTY Trigger: GTACGTGCCGAAGATCATCCACCTGGTTTGCAAACT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCCCCTTGTTCCAGGATaGCTTTGGCCCTCTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSPLVPG*LWPSLS Trigger: ACTTAAAGAGGGCCAAAGCCATCCTGGAACAAGGGG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAAAGAAAAGGTATTTTaGACCAGTGCCTCCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: QEARPALVLGAGSRSATLKEKVF*TSASLL Trigger: TAATAAGGAGGCACTGGTCCAAAATACCTTTTCTTT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCCTTCCTCCACCTCCATaGGAAGCGTCTGCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSLPPPP*EASAGS Trigger: TGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAG...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CAA 72 bp | CACTTCTGCTCCTTAGCAGCTGCCCATCCTGGCCACTaGTGGTCCGTTTCTCTGTACAGCAGGGACCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFCSLAAAHPGH*WSVSLYSRDLA Trigger: AGCCAGGTCCCTGCTGTACAGAGAAACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR TCA 90 bp | CAAGGGTCACTTCTGCTCCTTAGCAGCTGCCCATCCTGGCCACTTGTGGTCCGTTGTCCAAGATGGCAGTaGGGGAAGCCACGCCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSLLLLSSCPSWPLVVRCPRWQ*GKPRHN Trigger: ATTATGGCGTGGCTTCCCTCACTGCCATCTTGGACA...ACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTGACCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTCTCCAGGATTGTGTaGACAAGAAACACCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVLSRIV*TRNTHR Trigger: TCTGTGGGTGTTTCTTGTTCACACAATCCTGGAGAG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTTGGAATGTCCTTCCTaGACAAAAGCAGCGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSLECPS*TKAAIP Trigger: AGGGATCGCTGCTTTTGTGCAGGAAGGACATTCCAA...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCGCTGTACTTCCTTTaGAATGTCCTTCCTGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVPLYFL*NVLPAQ Trigger: TTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCAGGGCGCTGCAGGTTaGTTATTGTTTTTATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSQGAAG*LLFLCL Trigger: AAGGCATAAAAACAATAATCAACCTGCAGCGCCCTG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCAAATGCCAGCCTCCATaGATGCCTCAGGAAGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSKCQPP*MPQEGR Trigger: CCTACCTTCCTGAGGCATTCATGGAGGCTGGCATTT...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCCACATCCTCTTTGGTaGTTACAGGCTCTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSPHPLW*LQALSV Trigger: AACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCACATCCTCTTTGGTaGTTACAGGCTCTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVPHPLW*LQALSV Trigger: AACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCTGCTCTCCAGGGCGCTaGAGGTTGATTATTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVCSPGR*RLIIVF Trigger: AAAAACAATAATCAACCTGCAGCGCCCTGGAGAGCA...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGGGAATTGGGGCGTTTTaGCCGAACAAATATAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQGIGAF*PNKYNC Trigger: GCAATTATATTTGTTCGGGCAAAACGCCCCAATTCC...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCCCTCAGACAGGTCTGTaGTGTCTTGGGTTTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSPQTGL*CLGFPV Trigger: GACAGGAAACCCAAGACAGCACAGACCTGTCTGAGG...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCGTGCAGCATGCCCACTaGTATTCACCAACGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSVQHAH*YSPTWN Trigger: ATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCAC...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTTGTTTGTATGGAATTaGGGCGTTTTGCCCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSLFVWN*GVLPEQ Trigger: TTGTTCGGGCAAAACGCCCCAATTCCATACAAACAA...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCCCCCTTGTTCCAGGATaGCTTTGGCCCTCTTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSPLVPG*LWPSLS Trigger: ACTTAAAGAGGGCCAAAGCCATCCTGGAACAAGGGG...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CAA 72 bp | ACCACTGGCCGGTTCTCAGCCAAGTCAAGCAGCAGTTaGCAAACCAGGTGGATGATCTTCGGCACGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGRFSAKSSSS*QTRWMIFGTYF Trigger: GAAGTACGTGCCGAAGATCATCCACCTGGTTTGCAAACTGCTGCTTGACTTGGCTGAGAACCGGCCAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGCCGAACAAATATAATTaGTTGGTCAGCAGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQPNKYN*LVSSHS Trigger: AGAATGACTGCTGACCAAGCAATTATATTTGTTCGG...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCAGTTTGCAAACCAGGTaGATGATCTTCGGCACGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSSLQTR*MIFGTY Trigger: GTACGTGCCGAAGATCATCCACCTGGTTTGCAAACT...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGGGTGTCGTAAACTATTaGTCCGTTTTCAGAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQGVVNY*SVFRIK Trigger: TTTGATTCTGAAAACGGACCAATAGTTTACGACACC...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR CAA 72 bp | TTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTaGCTTCAGCACTCAGTTCAGGCTGCAGACCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPGLWPPVFS*LQHSVQAADQH Trigger: ATGCTGGTCTGCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR TCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCCAGGGCGCTGCAGGTTaGTTATTGTTTTTATGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSQGAAG*LLFLCL Trigger: AAGGCATAAAAACAATAATCAACCTGCAGCGCCCTG...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCCGAACAAATATAATTaGTTGGTCAGCAGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSPNKYN*LVSSHS Trigger: AGAATGACTGCTGACCAAGCAATTATATTTGTTCGG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCGGTGTCGTAAACTATTaGTCCGTTTTCAGAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVGVVNY*SVFRIK Trigger: TTTGATTCTGAAAACGGACCAATAGTTTACGACACC...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR TCA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGCTCCTGACCATCTCGTaGACAGGGCCCGGGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIRVGEANDGNSFGYTRLLLTIS*TGPGTQ Trigger: CTGGGTCCCGGGCCCTGTTCACGAGATGGTCAGGAG...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCTTGTTTGTATGGAATTaGGGCGTTTTGCCCGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSLFVWN*GVLPEQ Trigger: TTGTTCGGGCAAAACGCCCCAATTCCATACAAACAA...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCAAAGAAAAGGTATTTTaGACCAGTGCCTCCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: GSRSATLRRGGCSGWMLVKEKVF*TSASLL Trigger: TAATAAGGAGGCACTGGTCCAAAATACCTTTTCTTT...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR CAA 72 bp | GTGACCTGCTCTGGATCCTTATGGATACTTGTGAAGTaGGGCGGCACTGGCTCTCCAGGATTGTGTGAACAA | + |
|
Preference number: 4 (lower is better) Translates to: VTCSGSLWILVK*GGTGSPGLCEQ Trigger: TTGTTCACACAATCCTGGAGAGCCAGTGCCGCCCAACTTCACAAGTATCCATAAGGATCCAGAGCAGGTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGGTCACTTCTGCTCCTTAGCAGCTGCCCATCCTGGCCACTTGTGGTCCGTGAATTTAGTTCTTTCTaGCACATCTCCACTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QGSLLLLSSCPSWPLVVREFSSF*HISTFL Trigger: AAGGAAAGTGGAGATGTGGCAGAAAGAACTAAATTC...ACGGACCACAAGTGGCCAGGATGGGCAGCTGCTAAGGAGCAGAAGTGACCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | CTCCAGGATTGTGTGAACAAGAAACACCCACAGAGAAGGTTCTGCTCCGCTGTATGGATCTTCATTCTGTaGCAAGACTCCTGCGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQDCVNKKHPQRRFCSAVWIFIL*QDSCGH Trigger: ATGGCCGCAGGAGTCTTGCCACAGAATGAAGATCCA...TACAGCGGAGCAGAACCTTCTCTGTGGGTGTTTCTTGTTCACACAATCCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 72 bp | AGCCAGGAACTGCGTGAATTCCCGTACACAGAGCAGTaGTCCTCTTGTTTGTATGGAATTGGGGCGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SQELREFPYTEQ*SSCLYGIGAFC Trigger: GCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCACGCAGTTCCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR GCA 90 bp | AACTCATTTAAGTTTGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTTCAGCAGTGCAGCATGCCCACTaGTATTCACCAACGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NSFKFARALAASILLASAVQHAH*YSPTWN Trigger: ATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCAC...TGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR GCA 90 bp | GTATTTCCTTTCCCAAGAAGAACATTCATGGTGAAGGAAATTGCACTTGGCTTTGGCTGCAGACCAGCATaGGGCACTGCCTCAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFPFPRRTFMVKEIALGFGCRPA*GTASDR Trigger: CCTGTCTGAGGCAGTGCCGCATGCTGGTCTGCAGCC...AAAGCCAAGTGCAATTTCCTTCACCATGAATGTTCTTCTTGGGAAAGGAAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAGCCTCACACCGGCAATaGGTGACCTGCTCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLASHRQ*VTCSGS Trigger: GGATCCAGAGCAGGTCACCCATTGCCGGTGTGAGGC...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTTACCACCTTTGTCAAGAAAACTATTATGGCATGGGCTCTGCTACTCAGGTCTGTGCTGTCTTaGGTTTCCTGTCCGTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLVTTFVKKTIMAWALLLRSVLS*VSCPCG Trigger: CCCACACGGACAGGAAACCCAAGACAGCACAGACCT...GAGTAGCAGAGCCCATGCCATAATAGTTTTCTTGACAAAGGTGGTAACTAGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGTTAATGGCTTGCTCCTaGTCACTCCAGCGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VIRVGEANDGNSFGYTRLLMACS*SLQRAG Trigger: CCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAA...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTATTAATGGCTTGCTCCTaGTCACTCCAGCGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLLMACS*SLQRAG Trigger: CCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAA...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | CACTGGGTAAGCCGGTTCATTAACCATCACCGTATTTCCTTTCCCAAGAAGAACGTACTTCAGAAGTCGTaGCTCGTAGCCATGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HWVSRFINHHRISFPKKNVLQKS*LVAMKQ Trigger: CTGCTTCATGGCTACGAGGCACGACTTCTGAAGTAC...GTTCTTCTTGGGAAAGGAAATACGGTGATGGTTAATGAACCGGCTTACCCAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAACCAGCATGCGGCACTaGCTCAGACAGGTCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLTSMRH*LRQVCA Trigger: AGCACAGACCTGTCTGAGGCAGTGCCGCATGCTGGT...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAGCACTCAGTTCAGGCTaGAGACCAGCATGCGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLALSSG*RPACGT Trigger: AGTGCCGCATGCTGGTCTGCAGCCTGAACTGAGTGC...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACATGACGGTGCCAGAACTTAAAACAAATGTTGCAAATGCACAGGCGCACTGGCGAATCAGGTACTaGGCTAAGGTAACAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: QHMTVPELKTNVANAQAHWRIRY*AKVTAC Trigger: ACATGCTGTTACCTTAGCCCAGTACCTGATTCGCCA...GTGCGCCTGTGCATTTGCAACATTTGTTTTAAGTTCTGGCACCGTCATGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | GGTCTAGTTACCACCTTTGTCAAGAAAACTATTATGGCATGGGCTCTGCTACTCAGTTTGCCAGGGCTTTaGCCGCCAGTATTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLVTTFVKKTIMAWALLLSLPGL*PPVFSL Trigger: CAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACT...GAGTAGCAGAGCCCATGCCATAATAGTTTTCTTGACAAAGGTGGTAACTAGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACTTCCTCCACCTCCATaGGAAGCGTCTGCAGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLLPPPP*EASAGS Trigger: TGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAACTCCCTTAATGGCTTaGTCCTGCTCACTCCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLTPLMA*SCSLQR Trigger: CCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGAGT...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | ACTGCCGAATCACTGAAAATAATATTCCTTCAAAGACCTGACCACATCTGTAAAGCCTCACACCGGCAATaGGTGACCTGCTCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: TAESLKIIFLQRPDHICKASHRQ*VTCSGS Trigger: GGATCCAGAGCAGGTCACCCATTGCCGGTGTGAGGC...TTTACAGATGTGGTCAGGTCTTTGAAGGAATATTATTTTCAGTGATTCGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CAA 72 bp | CGAATCAGGTACTGGGCTAAGGTAACAGCATGTGCTTaGGGGTCACAGCAAGAGAAAATATTACGGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RIRYWAKVTACA*GSQQEKILRSG Trigger: TCCACTCCGTAATATTTTCTCTTGCTGTGACCCCAAAGCACATGCTGTTACCTTAGCCCAGTACCTGATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR TCA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGGAGAGAATCACATCCTaGTTCTCGAACTCGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VIRVGEANDGNSFGYTRLERITS*FSNSAT Trigger: GGTGGCCGAGTTCGAGAATCAGGATGTGATTCTCTC...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| CDS-3UTR GCA 90 bp | GTATTTCCTTTCCCAAGAAGAACATTCATGGTGAAGGAAATTGCACTTGGCTTTATGGAACATGCCATGTaGCCAGGGATGACATGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VFPFPRRTFMVKEIALGFMEHAM*PGMTCR Trigger: GCGGCATGTCATCCCTGGGCACATGGCATGTTCCAT...AAAGCCAAGTGCAATTTCCTTCACCATGAATGTTCTTCTTGGGAAAGGAAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGGCCAGCCTCCATGAATaGCTCAGGAAGGTAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VIRVGEANDGNSFGYTRLASLHE*LRKVGE Trigger: TTCACCTACCTTCCTGAGGCATTCATGGAGGCTGGC...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAGCCAGCCTCCATGAATaGCTCAGGAAGGTAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLASLHE*LRKVGE Trigger: TTCACCTACCTTCCTGAGGCATTCATGGAGGCTGGC...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACAGGTCCTTCTAGCATaGTCTTCATCACCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLQVLLA*SSSPLA Trigger: GGCCAGTGGTGATGAAGAGCATGCTAGAAGGACCTG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAAGTTTGCCAGGGCTTTaGCCGCCAGTATTCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLSLPGL*PPVFSL Trigger: CAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACT...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR CAA 72 bp | CGTGAATTCCCGTACACAGAGCAGTTGTCCTCTTGTTaGTATGGAATTGGGGCGTTTTGCCCGAACAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: REFPYTEQLSSC*YGIGAFCPNKY Trigger: ATATTTGTTCGGGCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTACGGGAATTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| 3UTR CAA 72 bp | ATCCCTCATCCTTCAGTCCTTCTAAGCCTCCACACTTaGACGGAGTCCAGAAAGAAAAGGTATTTTGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IPHPSVLLSLHT*TESRKKRYFGP Trigger: TGGTCCAAAATACCTTTTCTTTCTGGACTCCGTCAAAGTGTGGAGGCTTAGAAGGACTGAAGGATGAGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGTCCATGTGTGCAGCATaGCCACTGCTATTCACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VIRVGEANDGNSFGYTRLSMCAA*PLLFTN Trigger: GTTGGTGAATAGCAGTGGGCATGCTGCACACATGGA...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | CACTGGGTAAGCCGGTTCATTAACCATCACCGTATTTCCTTTCCCAAGAAGAACGGAATTGGGGCGTTTTaGCCGAACAAATATAATTGC | + |
|
Preference number: 4 (lower is better) Translates to: HWVSRFINHHRISFPKKNGIGAF*PNKYNC Trigger: GCAATTATATTTGTTCGGGCAAAACGCCCCAATTCC...GTTCTTCTTGGGAAAGGAAATACGGTGATGGTTAATGAACCGGCTTACCCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | GTATTTCCTTTCCCAAGAAGAACATTCATGGTGAAGGAAATTGCACTTGGCTTTCAGGTCCTTCTAGCATaGTCTTCATCACCACTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VFPFPRRTFMVKEIALGFQVLLA*SSSPLA Trigger: GGCCAGTGGTGATGAAGAGCATGCTAGAAGGACCTG...AAAGCCAAGTGCAATTTCCTTCACCATGAATGTTCTTCTTGGGAAAGGAAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CAA 72 bp | CGTACACAGAGCAGTTGTCCTCTTGTTTGTATGGAATaGGGGCGTTTTGCCCGAACAAATATAATTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTQSSCPLVCME*GRFARTNIIAW Trigger: CCAAGCAATTATATTTGTTCGGGCAAAACGCCCCAATTCCATACAAACAAGAGGACAACTGCTCTGTGTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR GCA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGTTGGAATGTCCTTCCTaGACAAAAGCAGCGATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VIRVGEANDGNSFGYTRLLECPS*TKAAIP Trigger: AGGGATCGCTGCTTTTGTGCAGGAAGGACATTCCAA...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR TCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACCACATCCTCTTTGGTaGTTACAGGCTCTTTCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLPHPLW*LQALSV Trigger: AACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR GCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTATGCTCTCCAGGGCGCTaGAGGTTGATTATTGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLCSPGR*RLIIVF Trigger: AAAAACAATAATCAACCTGCAGCGCCCTGGAGAGCA...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR CAA 72 bp | GGTGAAGGAAATTGCACTTGGCTTTTGTCATCAGAGTaGGTGAGGCTAATGATGGAAATAGTTTTGGATACA | + |
|
Preference number: 4 (lower is better) Translates to: GEGNCTWLLSSE*VRLMMEIVLDT Trigger: TGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGACAAAAGCCAAGTGCAATTTCCTTCACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| 3UTR CAA 72 bp | AAGAACATTCATGGTGAAGGAAATTGCACTTGGCTTTaGTCATCAGAGTTGGTGAGGCTAATGATGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: KNIHGEGNCTWL*SSELVRLMMEI Trigger: TATTTCCATCATTAGCCTCACCAACTCTGATGACAAAAGCCAAGTGCAATTTCCTTCACCATGAATGTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CCA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAAAAGAAAAGGTATTTTaGACCAGTGCCTCCTTATTA | + |
|
Preference number: 4 (lower is better) Translates to: IFLREGTHVLGRIHSEVLKEKVF*TSASLL Trigger: TAATAAGGAGGCACTGGTCCAAAATACCTTTTCTTT...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| 3UTR CAA 72 bp | TCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTaGGATACACTAGACTGTAATTCAGAAATGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSELVRLMMEIV*DTLDCNSEMHE Trigger: CTCATGCATTTCTGAATTACAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR GCA 90 bp | GCCGAATCACTGAAAATAATATTCCTTCAAAGACCTGACCACATCTGTAAAGAACCGAACAAATATAATTaGTTGGTCAGCAGTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: AESLKIIFLQRPDHICKEPNKYN*LVSSHS Trigger: AGAATGACTGCTGACCAAGCAATTATATTTGTTCGG...TTCTTTACAGATGTGGTCAGGTCTTTGAAGGAATATTATTTTCAGTGATTCGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS TCA 90 bp | GGACTGGGTCAGAAGTGGAGTGCCGGCGGCCCTGCAGAAAGGCACTaGGGAAGTGCACGGCCGAGGGCCTCCGGGATGGGTCCTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGQKWSAGGPAERH*GSARPRASGMGPAS Trigger: AGATGCAGGACCCATCCCGGAGGCCCTCGGCCGTGCACTTCCTCAGTGCCTTTCTGCAGGGCCGCCGGCACTCCACTTCTGACCCAGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
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| CDS GCA 90 bp | CCACGCCGGGCTTGCTGTAGCCTCAGGACTGGGTCAGAAGTGGAGTaGCGGCGGCCCTGCAGAAAGGCACTGAGGAAGTGCACGGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: PRRACCSLRTGSEVE*RRPCRKALRKCTAE Trigger: CTCGGCCGTGCACTTCCTCAGTGCCTTTCTGCAGGGCCGCCGGCACTCCACTTCTGACCCAGTCCTGAGGCTACAGCAAGCCCGGCGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAACCCAGCTCTGGAGTaGGTGGCATGTAGCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: QEARPALVLGAGSRSATLNPALE*VACSNG Trigger: GCCATTGCTACATGCCACCAACTCCAGAGCTGGGTT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGAAGTTTGCCAGGGCTTaGGCCGCCAGTATTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGKFARA*AASILL Trigger: AAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTT...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS GCA 90 bp | GATGAGGACAGCAGTTTGGTGGCAGAGCCAGAGCCACGCCGGGCTTaGTGTAGCCTCAGGACTGGGTCAGAAGTGGAGTGCCGGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DEDSSLVAEPEPRRA*CSLRTGSEVECRRP Trigger: GGGCCGCCGGCACTCCACTTCTGACCCAGTCCTGAGGCTACAGCAAGCCCGGCGTGGCTCTGGCTCTGCCACCAAACTGCTGTCCTCATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCCGCCAGTATTCTCCTaGCTTCAGCACTCAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEARPALVLGAGSRSATLPPVFS*LQHSVQ Trigger: CTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCCACTTTCGTGTATTTaGGTGCTGGGCGTCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: QEARPALVLGAGSRSATLPLSCI*VLGVLN Trigger: ATTCAGGACGCCCAGCACCAAAATACACGAAAGTGG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCTTGTTTGTATGGAATaGGGGCGTTTTGCCCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGLVCME*GRFART Trigger: TGTTCGGGCAAAACGCCCCAATTCCATACAAACAAG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCCGTACACAGAGCAGTaGTCCTCTTGTTTGTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGPYTEQ*SSCLYG Trigger: TCCATACAAACAAGAGGACAACTGCTCTGTGTACGG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGGTAACAGCATGTGCTTaGGGGTCACAGCAAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGVTACA*GSQQEK Trigger: TTTCTCTTGCTGTGACCCCAAAGCACATGCTGTTAC...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGAAGTCAAGCAGCAGTTaGCAAACCAGGTGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGKSSSS*QTRWMI Trigger: GATCATCCACCTGGTTTGCAAACTGCTGCTTGACTT...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCACTGGCTCTCCAGGATaGTGTGAACAAGAAACACCC | + |
|
Preference number: 5 (lower is better) Translates to: QEARPALVLGAGSRSATLTGSPG*CEQETP Trigger: GGGTGTTTCTTGTTCACACAATCCTGGAGAGCCAGT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCAAACTCATTTAAGTTaGCCAGGGCTTTGGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QEARPALVLGAGSRSATLQTHLS*PGLWPP Trigger: TGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCCCAGGGCGCTGCAGGTaGATTATTGTTTTTATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QEARPALVLGAGSRSATLPGRCR*IIVFMP Trigger: AGGCATAAAAACAATAATCAACCTGCAGCGCCCTGG...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGCAGTTGTCCTCTTGTTaGTATGGAATTGGGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGQLSSC*YGIGAF Trigger: AAACGCCCCAATTCCATACAAACAAGAGGACAACTG...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGATGTCCACATCCTCTTaGGTGATTACAGGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGMSTSS*VITGSF Trigger: GAAAGAGCCTGTAATCACCAAAGAGGATGTGGACAT...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCCAAGGTGTCTCCCCTaGTTCCAGGATGGCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSPRCLP*FQDGFG Trigger: GCCAAAGCCATCCTGGAACAAGGGGAGACACCTTGG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCAAGGTGTCTCCCCTaGTTCCAGGATGGCTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSRSATLRRGGCSGWMLVPRCLP*FQDGFG Trigger: GCCAAAGCCATCCTGGAACAAGGGGAGACACCTTGG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGAACCCAGCTCTGGAGTaGGTGGCATGTAGCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQNPALE*VACSNG Trigger: GCCATTGCTACATGCCACCAACTCCAGAGCTGGGTT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGAGGGGAAAGAAAAGGTATTTaGGACCAGTGCCTCCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: RGQHWSSGRGAEAPPSGGERKGI*DQCLLI Trigger: AATAAGGAGGCACTGGTCCAAAATACCTTTTCTTTC...CCCTCCTGAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCAGGTCTGTGCTGTCTaGGGTTTCCTGTCCGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRSATLRRGGCSGWMLVQVCAV*GFLSVW Trigger: CCACACGGACAGGAAACCCAAGACAGCACAGACCTG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS GCA 90 bp | CCCAGAAGACAGCCGAGTGAGAAACCGCAGCTTCAGCATCGCAGATaGAGTGACGAGCAGGATGGACTCTCTGAGGGGCTCAGCGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PRRQPSEKPQLQHRR*SDEQDGLSEGLSEL Trigger: GAGCTCGCTGAGCCCCTCAGAGAGTCCATCCTGCTCGTCACTGCATCTGCGATGCTGAAGCTGCGGTTTCTCACTCGGCTGTCTTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGAAGTTTGCCAGGGCTTaGGCCGCCAGTATTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQKFARA*AASILL Trigger: AAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTT...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCGCGGCCAGCACTGGTCCTCGGGGCGGGGAGCAGAAGCGCCACCCTCAGGTGTCGTAAACTATaGGTCCGTTTTCAGAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QEARPALVLGAGSRSATLRCRKL*VRFQNQ Trigger: TTGATTCTGAAAACGGACCAATAGTTTACGACACCT...GAGGGTGGCGCTTCTGCTCCCCGCCCCGAGGACCAGTGCTGGCCGCGCTTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGTACTCCCTTAATGGCTaGCTCCTGCTCACTCCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LARSCALVLLSFLHSPGRYSLNG*LLLTPA Trigger: CGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGAGTA...CCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| CDS-3UTR CAA 90 bp | CTGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGAACCCAGCTCTGGAGTaGGTGGCATGTAGCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LARSCALVLLSFLHSPGRNPALE*VACSNG Trigger: GCCATTGCTACATGCCACCAACTCCAGAGCTGGGTT...CCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCAAGTTTGCCAGGGCTTaGGCCGCCAGTATTCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GSRSATLRRGGCSGWMLVKFARA*AASILL Trigger: AAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTT...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS GCA 90 bp | GGCAAGCTTCCTCCACCTCCATGGGAAGCGTCTGCAGGCTCACTATaGAGTGCAGCACACAGAGGATGGTCTGGTACTGCCCCTTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: GKLPPPPWEASAGSL*SAAHRGWSGTAPSL Trigger: TAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAGCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCACTTTCGTGTATTTaGGTGCTGGGCGTCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: GSRSATLRRGGCSGWMLVPLSCI*VLGVLN Trigger: ATTCAGGACGCCCAGCACCAAAATACACGAAAGTGG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGCTAAGCCTCCACACTTaGACGGAGTCCAGAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQLSLHT*TESRKK Trigger: TTTCTTTCTGGACTCCGTCAAAGTGTGGAGGCTTAG...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACAAGGGTCACTTCTGCTCCCAGGTCTGTGCTGTCTaGGGTTTCCTGTCCGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GTAVFSAQSGEDKGHFCSQVCAV*GFLSVW Trigger: CCACACGGACAGGAAACCCAAGACAGCACAGACCTG...GGAGCAGAAGTGACCCTTGTCCTCCCCGGACTGTGCAGAAAAGACAGCAGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
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| CDS GCA 90 bp | CTCCCACCACACGCCATGGAACATGCCATGTGCCCAGGGATGACATaGCGCAAACGTTCTCCCACTTTCGTGTATTTTGGTGCTGGGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LPPHAMEHAMCPGMT*RKRSPTFVYFGAGR Trigger: ACGCCCAGCACCAAAATACACGAAAGTGGGAGAACGTTTGCGGCATGTCATCCCTGGGCACATGGCATGTTCCATGGCGTGTGGTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000223025.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCTTGTTTGTATGGAATaGGGGCGTTTTGCCCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GSRSATLRRGGCSGWMLVLVCME*GRFART Trigger: TGTTCGGGCAAAACGCCCCAATTCCATACAAACAAG...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCGTAACAGCATGTGCTTaGGGGTCACAGCAAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSRSATLRRGGCSGWMLVVTACA*GSQQEK Trigger: TTTCTCTTGCTGTGACCCCAAAGCACATGCTGTTAC...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCAAGTCAAGCAGCAGTTaGCAAACCAGGTGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: GSRSATLRRGGCSGWMLVKSSSS*QTRWMI Trigger: GATCATCCACCTGGTTTGCAAACTGCTGCTTGACTT...GACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCTAAGCCTCCACACTTaGACGGAGTCCAGAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSLSLHT*TESRKK Trigger: TTTCTTTCTGGACTCCGTCAAAGTGTGGAGGCTTAG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | CTGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGTCCGCTGTACTTCCTTaGGAATGTCCTTCCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LARSCALVLLSFLHSPGRSAVLP*ECPSCT Trigger: TGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGA...CCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CAA 90 bp | CTGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGACTGGCTCTCCAGGATaGTGTGAACAAGAAACACCC | + |
|
Preference number: 5 (lower is better) Translates to: LARSCALVLLSFLHSPGRTGSPG*CEQETP Trigger: GGGTGTTTCTTGTTCACACAATCCTGGAGAGCCAGT...CCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS TCA 90 bp | ACGCTCTCCCACCACACGCCATGGAACATGCCATGTGCCCAGGGATaGCATGCCGCAAACGTTCTCCCACTTTCGTGTATTTTGGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLSHHTPWNMPCAQG*HAANVLPLSCILVL Trigger: CAGCACCAAAATACACGAAAGTGGGAGAACGTTTGCGGCATGTCATCCCTGGGCACATGGCATGTTCCATGGCGTGTGGTGGGAGAGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000223025.2 ENSMUST00000238995.2 |
||
| CDS GCA 90 bp | GCTTCCTCCACCTCCATGGGAAGCGTCTGCAGGCTCACTATGCAGTaGAGCACACAGAGGATGGTCTGGTACTGCCCCTTCTCTAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ASSTSMGSVCRLTMQ*STQRMVWYCPFSSK Trigger: TTTACTAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CCA 90 bp | TGGGAAGCGTCTGCAGGCTCACTATGCAGTGCAGCACACAGAGGATaGTCTGGTACTGCCCCTTCTCTAGTAAAAACAGGGCTTCGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WEASAGSLCSAAHRG*SGTAPSLVKTGLRQ Trigger: CTGCCGAAGCCCTGTTTTTACTAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCTTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCCAGTTGTCCTCTTGTTaGTATGGAATTGGGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSQLSSC*YGIGAF Trigger: AAACGCCCCAATTCCATACAAACAAGAGGACAACTG...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS GCA 90 bp | TGGGTTCTCATACTTACACGCTCTCCCACCACACGCCATGGAACATaGCATGTGCCCAGGGATGACATGCCGCAAACGTTCTCCCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: WVLILTRSPTTRHGT*HVPRDDMPQTFSHF Trigger: AAAGTGGGAGAACGTTTGCGGCATGTCATCCCTGGGCACATGGCATGTTCCATGGCGTGTGGTGGGAGAGCGTGTAAGTATGAGAACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS GCA 90 bp | ATGGCATGTAAAAGGCAAGCTTCCTCCACCTCCATGGGAAGCGTCTaGAGGCTCACTATGCAGTGCAGCACACAGAGGATGGTCTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: MACKRQASSTSMGSV*RLTMQCSTQRMVWY Trigger: GTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAGCTTGCCTTTTACATGCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS CCA 90 bp | AGCGTCTGCAGGCTCACTATGCAGTGCAGCACACAGAGGATGGTCTaGTACTGCCCCTTCTCTAGTAAAAACAGGGCTTCGGCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SVCRLTMQCSTQRMV*YCPFSSKNRASAAS Trigger: AGATGCTGCCGAAGCCCTGTTTTTACTAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | GCTGAGCTGTCTTTTCAGATGTGTCAGGGGCTGAAGGCACTCAATATCCCTCCTGCCATGGCCAGGATATaGTCAGTGACCACGCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AELSFQMCQGLKALNIPPAMARI*SVTTLS Trigger: GGAGAGCGTGGTCACTGACAATATCCTGGCCATGGC...AGGAGGGATATTGAGTGCCTTCAGCCCCTGACACATCTGAAAAGACAGCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS GCA 90 bp | TGCAGGCTCACTATGCAGTGCAGCACACAGAGGATGGTCTGGTACTaGCCCTTCTCTAGTAAAAACAGGGCTTCGGCAGCATCTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: CRLTMQCSTQRMVWY*PFSSKNRASAASAC Trigger: ACAAGCAGATGCTGCCGAAGCCCTGTTTTTACTAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGCCGTCATCCTCAGCCCAGGGAGGCGGCACTGACAATGGACTGAGGCAGGGTCAGCAGTCATTCTaGTTGCAAAAACTAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: EEPSSSAQGGGTDNGLRQGQQSF*LQKLNN Trigger: GTTATTTAGTTTTTGCAACAAGAATGACTGCTGACC...CTGCCTCAGTCCATTGTCAGTGCCGCCTCCCTGGGCTGAGGATGACGGCTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCAGGTGTCGTAAACTATaGGTCCGTTTTCAGAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSRCRKL*VRFQNQ Trigger: TTGATTCTGAAAACGGACCAATAGTTTACGACACCT...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS TCA 90 bp | GCTCTTTCAGTTGCTCAACCCAAGACCACATCAAACTGCACAAGATaGAAGGGTCTCTCTCGCCGCATATTCGTTCCCAGGCTTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALSVAQPKTTSNCTR*KGLSRRIFVPRLPP Trigger: GGGAGGAAGCCTGGGAACGAATATGCGGCGAGAGAGACCCTTTCATCTTGTGCAGTTTGATGTGGTCTTGGGTTGAGCAACTGAAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS TCA 90 bp | CCGCAAACGTTCTCCCACTTTCGTGTATTTTGGTGCTGGGCGTCCTaGATTTTCAAGAATGCAGCAGGAGAGCCCAGAAGACAGCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PQTFSHFRVFWCWAS*IFKNAAGEPRRQPS Trigger: ACTCGGCTGTCTTCTGGGCTCTCCTGCTGCATTCTTGAAAATTCAGGACGCCCAGCACCAAAATACACGAAAGTGGGAGAACGTTTGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGAAGCGCCACCCTCAGGAGGGGTGGATGCTCAGGTTGGATGCTTGTCCGGTCAGCAGTCATTCTaGTTGCAAAAACTAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: GAEAPPSGGVDAQVGCLSGQQSF*LQKLNN Trigger: GTTATTTAGTTTTTGCAACAAGAATGACTGCTGACC...GGACAAGCATCCAACCTGAGCATCCACCCCTCCTGAGGGTGGCGCTTCTGCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | TCTGCTCCGCTGTACTTCCTTTGGAATGTCCTTCCTGCACAAAAGCAGCGATCCCCACTTTCGTGTATTTaGGTGCTGGGCGTCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SAPLYFLWNVLPAQKQRSPLSCI*VLGVLN Trigger: ATTCAGGACGCCCAGCACCAAAATACACGAAAGTGG...GGATCGCTGCTTTTGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000223025.2 |
||
| CDS-3UTR CAA 90 bp | CTGGCTAGGAGCTGTGCCCTGGTACTGCTGTCTTTTCTGCACAGTCCGGGGAGGGGTCAGCAGTCATTCTaGTTGCAAAAACTAAATAAC | + |
|
Preference number: 5 (lower is better) Translates to: LARSCALVLLSFLHSPGRGQQSF*LQKLNN Trigger: GTTATTTAGTTTTTGCAACAAGAATGACTGCTGACC...CCTCCCCGGACTGTGCAGAAAAGACAGCAGTACCAGGGCACAGCTCCTAGCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS TCA 90 bp | CAGCATCTGCTTGTCTGTCGACCAGCATGTCCACATCCTCTTTGGTaGTTACAGGCTCTTTCAGTTGCTCAACCCAAGACCACATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QHLLVCRPACPHPLW*LQALSVAQPKTTSN Trigger: GTTTGATGTGGTCTTGGGTTGAGCAACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGGACATGCTGGTCGACAGACAAGCAGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS CCA 90 bp | TCACTTCCTCCTTTTCAACAAACTCATTTAAGTTTGCCAGGGCTTTaGCCGCCAGTATTCTCCTTGCTTCAGCACTCAGTTCAGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLPPFQQTHLSLPGL*PPVFSLLQHSVQAA Trigger: TGCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTGTTGAAAAGGAGGAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACAGGTCTGTGCTGTCTaGGGTTTCCTGTCCGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLQVCAV*GFLSVW Trigger: CCACACGGACAGGAAACCCAAGACAGCACAGACCTG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS GCA 90 bp | ACCAGCATGTCCACATCCTCTTTGGTGATTACAGGCTCTTTCAGTTaGTCAACCCAAGACCACATCAAACTGCACAAGATGAAAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSMSTSSLVITGSFS*STQDHIKLHKMKGS Trigger: AGACCCTTTCATCTTGTGCAGTTTGATGTGGTCTTGGGTTGAGCAACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGGACATGCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | CAGCACATGACGGTGCCAGAACTTAAAACAAATGTTGCAAATGCACAGGCGCACCAGTTGTCCTCTTGTTaGTATGGAATTGGGGCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QHMTVPELKTNVANAQAHQLSSC*YGIGAF Trigger: AAACGCCCCAATTCCATACAAACAAGAGGACAACTG...GTGCGCCTGTGCATTTGCAACATTTGTTTTAAGTTCTGGCACCGTCATGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CAA 90 bp | CACTGGGTAAGCCGGTTCATTAACCATCACCGTATTTCCTTTCCCAAGAAGAACCTAAGCCTCCACACTTaGACGGAGTCCAGAAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: HWVSRFINHHRISFPKKNLSLHT*TESRKK Trigger: TTTCTTTCTGGACTCCGTCAAAGTGTGGAGGCTTAG...GTTCTTCTTGGGAAAGGAAATACGGTGATGGTTAATGAACCGGCTTACCCAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CAA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGCCGCCAGTATTCTCCTaGCTTCAGCACTCAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VIRVGEANDGNSFGYTRLPPVFS*LQHSVQ Trigger: CTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGG...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACCGCCAGTATTCTCCTaGCTTCAGCACTCAGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLPPVFS*LQHSVQ Trigger: CTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACCACTTTCGTGTATTTaGGTGCTGGGCGTCCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLPLSCI*VLGVLN Trigger: ATTCAGGACGCCCAGCACCAAAATACACGAAAGTGG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTATCCGCTGTACTTCCTTaGGAATGTCCTTCCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLSAVLP*ECPSCT Trigger: TGTGCAGGAAGGACATTCCAAAGGAAGTACAGCGGA...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAACTGGCTCTCCAGGATaGTGTGAACAAGAAACACCC | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLTGSPG*CEQETP Trigger: GGGTGTTTCTTGTTCACACAATCCTGGAGAGCCAGT...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACAAACTCATTTAAGTTaGCCAGGGCTTTGGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLQTHLS*PGLWPP Trigger: TGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACCAGGGCGCTGCAGGTaGATTATTGTTTTTATGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLPGRCR*IIVFMP Trigger: AGGCATAAAAACAATAATCAACCTGCAGCGCCCTGG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACTTGTTTGTATGGAATaGGGGCGTTTTGCCCGAACA | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLLVCME*GRFART Trigger: TGTTCGGGCAAAACGCCCCAATTCCATACAAACAAG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTACCGTACACAGAGCAGTaGTCCTCTTGTTTGTATGGA | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLPYTEQ*SSCLYG Trigger: TCCATACAAACAAGAGGACAACTGCTCTGTGTACGG...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAAAGTCAAGCAGCAGTTaGCAAACCAGGTGGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLKSSSS*QTRWMI Trigger: GATCATCCACCTGGTTTGCAAACTGCTGCTTGACTT...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | GGTCTAGTTACCACCTTTGTCAAGAAAACTATTATGGCATGGGCTCTGCTACTCGAAAGAAAAGGTATTTaGGACCAGTGCCTCCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: GLVTTFVKKTIMAWALLLERKGI*DQCLLI Trigger: AATAAGGAGGCACTGGTCCAAAATACCTTTTCTTTC...GAGTAGCAGAGCCCATGCCATAATAGTTTTCTTGACAAAGGTGGTAACTAGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CAA 90 bp | ACTGCCGAATCACTGAAAATAATATTCCTTCAAAGACCTGACCACATCTGTAAACAAACTCATTTAAGTTaGCCAGGGCTTTGGCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TAESLKIIFLQRPDHICKQTHLS*PGLWPP Trigger: TGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTG...TTTACAGATGTGGTCAGGTCTTTGAAGGAATATTATTTTCAGTGATTCGGCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CAA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGATGTCCACATCCTCTTaGGTGATTACAGGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VIRVGEANDGNSFGYTRLMSTSS*VITGSF Trigger: GAAAGAGCCTGTAATCACCAAAGAGGATGTGGACAT...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAATGTCCACATCCTCTTaGGTGATTACAGGCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLMSTSS*VITGSF Trigger: GAAAGAGCCTGTAATCACCAAAGAGGATGTGGACAT...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | ATATTTCTGAGGGAGGGGACACATGTCTTGGGAAGGATACATAGTGAAGTTTTAGAAAGAAAAGGTATTTaGGACCAGTGCCTCCTTATT | + |
|
Preference number: 5 (lower is better) Translates to: IFLREGTHVLGRIHSEVLERKGI*DQCLLI Trigger: AATAAGGAGGCACTGGTCCAAAATACCTTTTCTTTC...TAAAACTTCACTATGTATCCTTCCCAAGACATGTGTCCCCTCCCTCAGAAATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS-3UTR CAA 90 bp | GTCATCAGAGTTGGTGAGGCTAATGATGGAAATAGTTTTGGATACACTAGACTGAGGTGTCGTAAACTATaGGTCCGTTTTCAGAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: VIRVGEANDGNSFGYTRLRCRKL*VRFQNQ Trigger: TTGATTCTGAAAACGGACCAATAGTTTACGACACCT...CAGTCTAGTGTATCCAAAACTATTTCCATCATTAGCCTCACCAACTCTGATGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035824.11 |
||
| CDS GCA 72 bp | GAGTGCCGGCGGCCCTGCAGAAAGGCACTGAGGAAGTaGACGGCCGAGGGCCTCCGGGATGGGTCCTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: ECRRPCRKALRK*TAEGLRDGSCI Trigger: GATGCAGGACCCATCCCGGAGGCCCTCGGCCGTGCACTTCCTCAGTGCCTTTCTGCAGGGCCGCCGGCACTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS TCA 72 bp | CAGAAGTGGAGTGCCGGCGGCCCTGCAGAAAGGCACTaGGGAAGTGCACGGCCGAGGGCCTCCGGGATGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QKWSAGGPAERH*GSARPRASGMG Trigger: ACCCATCCCGGAGGCCCTCGGCCGTGCACTTCCTCAGTGCCTTTCTGCAGGGCCGCCGGCACTCCACTTCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS GCA 72 bp | GCTTGCTGTAGCCTCAGGACTGGGTCAGAAGTGGAGTaGCGGCGGCCCTGCAGAAAGGCACTGAGGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACCSLRTGSEVE*RRPCRKALRKC Trigger: GCACTTCCTCAGTGCCTTTCTGCAGGGCCGCCGGCACTCCACTTCTGACCCAGTCCTGAGGCTACAGCAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS GCA 72 bp | AGCAGTTTGGTGGCAGAGCCAGAGCCACGCCGGGCTTaGTGTAGCCTCAGGACTGGGTCAGAAGTGGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSLVAEPEPRRA*CSLRTGSEVEC Trigger: GCACTCCACTTCTGACCCAGTCCTGAGGCTACAGCAAGCCCGGCGTGGCTCTGGCTCTGCCACCAAACTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS GCA 72 bp | CCTCCACCTCCATGGGAAGCGTCTGCAGGCTCACTATaGAGTGCAGCACACAGAGGATGGTCTGGTACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPPPWEASAGSL*SAAHRGWSGTA Trigger: GGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGAGGTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS GCA 72 bp | CAGCCGAGTGAGAAACCGCAGCTTCAGCATCGCAGATaGAGTGACGAGCAGGATGGACTCTCTGAGGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QPSEKPQLQHRR*SDEQDGLSEGL Trigger: GAGCCCCTCAGAGAGTCCATCCTGCTCGTCACTGCATCTGCGATGCTGAAGCTGCGGTTTCTCACTCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
||
| CDS CCA 72 bp | TCCCTTAATGGCTTGCTCCTGCTCACTCCAGCGGGCTaGGTTCTCATACTTACACGCTCTCCCACCACACGC | + |
|
Preference number: 6 (lower is better) Translates to: SLNGLLLLTPAG*VLILTRSPTTR Trigger: GCGTGTGGTGGGAGAGCGTGTAAGTATGAGAACCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS TCA 72 bp | TTCTCTCCGGGAAAGTTGGAGTCCCCTCTGTCCGGCTaGCAGAAGACACAGCCACCATCACCTGGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: FSPGKLESPLSG*QKTQPPSPGEK Trigger: CTTCTCTCCAGGTGATGGTGGCTGTGTCTTCTGTCAGCCGGACAGAGGGGACTCCAACTTTCCCGGAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238995.2 |
||
| CDS GCA 72 bp | AAAAGGCAAGCTTCCTCCACCTCCATGGGAAGCGTCTaGAGGCTCACTATGCAGTGCAGCACACAGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: KRQASSTSMGSV*RLTMQCSTQRM Trigger: CATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGACGCTTCCCATGGAGGTGGAGGAAGCTTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
||
| CDS TCA 72 bp | CACCACACGCCATGGAACATGCCATGTGCCCAGGGATaGCATGCCGCAAACGTTCTCCCACTTTCGTGTATT | + |
|
Preference number: 6 (lower is better) Translates to: HHTPWNMPCAQG*HAANVLPLSCI Trigger: AATACACGAAAGTGGGAGAACGTTTGCGGCATGTCATCCCTGGGCACATGGCATGTTCCATGGCGTGTGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000223025.2 ENSMUST00000238995.2 |
||
| CDS TCA 72 bp | TCCCACAGCTGGCATGCTCTCCAGGGCGCTGCAGGTTaGTTATTGTTTTTATGCCTTGACCGAGGAACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHSWHALQGAAG*LLFLCLDRGTA Trigger: AGCAGTTCCTCGGTCAAGGCATAAAAACAATAATCAACCTGCAGCGCCCTGGAGAGCATGCCAGCTGTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS GCA 72 bp | CACGCCATGGAACATGCCATGTGCCCAGGGATGACATaGCGCAAACGTTCTCCCACTTTCGTGTATTTTGGT | + |
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Preference number: 6 (lower is better) Translates to: HAMEHAMCPGMT*RKRSPTFVYFG Trigger: ACCAAAATACACGAAAGTGGGAGAACGTTTGCGGCATGTCATCCCTGGGCACATGGCATGTTCCATGGCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000223025.2 ENSMUST00000238995.2 |
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| CDS GCA 72 bp | ACCCAGGATGAGTATACTCCCTTAATGGCTTGCTCCTaGTCACTCCAGCGGGCTGGGTTCTCATACTTACAC | + |
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Preference number: 6 (lower is better) Translates to: TQDEYTPLMACS*SLQRAGFSYLH Trigger: GTGTAAGTATGAGAACCCAGCCCGCTGGAGTGAGCAGGAGCAAGCCATTAAGGGAGTATACTCATCCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CCA 72 bp | AGGCTCACTATGCAGTGCAGCACACAGAGGATGGTCTaGTACTGCCCCTTCTCTAGTAAAAACAGGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RLTMQCSTQRMV*YCPFSSKNRAS Trigger: CGAAGCCCTGTTTTTACTAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CCA 72 bp | TCTGCAGGCTCACTATGCAGTGCAGCACACAGAGGATaGTCTGGTACTGCCCCTTCTCTAGTAAAAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: SAGSLCSAAHRG*SGTAPSLVKTG Trigger: CCCTGTTTTTACTAGAGAAGGGGCAGTACCAGACCATCCTCTGTGTGCTGCACTGCATAGTGAGCCTGCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CAA 90 bp | TCGGCAGCATCTGCTTGTCTGTCGACCAGCATGTCCACATCCTCTTaGGTGATTACAGGCTCTTTCAGTTGCTCAACCCAAGACCACATC | + |
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Preference number: 6 (lower is better) Translates to: SAASACLSTSMSTSS*VITGSFSCSTQDHI Trigger: GATGTGGTCTTGGGTTGAGCAACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGGACATGCTGGTCGACAGACAAGCAGATGCTGCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS TCA 72 bp | GTTGCTCAACCCAAGACCACATCAAACTGCACAAGATaGAAGGGTCTCTCTCGCCGCATATTCGTTCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VAQPKTTSNCTR*KGLSRRIFVPR Trigger: CCTGGGAACGAATATGCGGCGAGAGAGACCCTTTCATCTTGTGCAGTTTGATGTGGTCTTGGGTTGAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CCA 72 bp | TGCAGCATGCCCACTGCTATTCACCAACGTGGAATATaGATCTTCATTCTGTGGCAAGACTCCTGCGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: CSMPTAIHQRGI*IFILWQDSCGH Trigger: ATGGCCGCAGGAGTCTTGCCACAGAATGAAGATCCATATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000223025.2 |
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| CDS TCA 72 bp | TTCTCCCACTTTCGTGTATTTTGGTGCTGGGCGTCCTaGATTTTCATCCATGTGTGCAGCATGCCCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: FSHFRVFWCWAS*IFIHVCSMPTA Trigger: AGCAGTGGGCATGCTGCACACATGGATGAAAATTCAGGACGCCCAGCACCAAAATACACGAAAGTGGGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035824.11 ENSMUST00000223025.2 |
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| CDS TCA 72 bp | TTATTGTTTTTATGCCTTGACCGAGGAACTGCTCGATaGTGCGATACTTCTCCAGCAGCTCGGAGGACGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLFLCLDRGTAR*CDTSPAARRTD Trigger: GTCCGTCCTCCGAGCTGCTGGAGAAGTATCGCATCATCGAGCAGTTCCTCGGTCAAGGCATAAAAACAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS TCA 72 bp | CCAGGGCGCTGCAGGTTGATTATTGTTTTTATGCCTTaGCCGAGGAACTGCTCGATGATGCGATACTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PGRCRLIIVFMP*PRNCSMMRYFS Trigger: GGAGAAGTATCGCATCATCGAGCAGTTCCTCGGTCAAGGCATAAAAACAATAATCAACCTGCAGCGCCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS TCA 72 bp | CTTGTCTGTCGACCAGCATGTCCACATCCTCTTTGGTaGTTACAGGCTCTTTCAGTTGCTCAACCCAAGACC | + |
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Preference number: 6 (lower is better) Translates to: LVCRPACPHPLW*LQALSVAQPKT Trigger: GGTCTTGGGTTGAGCAACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGGACATGCTGGTCGACAGACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CCA 72 bp | CCATGTGTGCAGCATGCCCACTGCTATTCACCAACGTaGAATATGGATCTTCATTCTGTGGCAAGACTCCTG | + |
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Preference number: 6 (lower is better) Translates to: PCVQHAHCYSPT*NMDLHSVARLL Trigger: CAGGAGTCTTGCCACAGAATGAAGATCCATATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCACACATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000223025.2 |
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| CDS TCA 72 bp | TTCTCCCACTTTCGTGTATTTTGGTGCTGGGCGTCCTaGATTTTCAAGAATGCAGCAGGAGAGCCCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: FSHFRVFWCWAS*IFKNAAGEPRR Trigger: TCTTCTGGGCTCTCCTGCTGCATTCTTGAAAATTCAGGACGCCCAGCACCAAAATACACGAAAGTGGGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
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| CDS CAA 72 bp | TCCAGGGCGCTGCAGGTTGATTATTGTTTTTATGCCTaGACCGAGGAACTGCTCGATGATGCGATACTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SRALQVDYCFYA*TEELLDDAILL Trigger: GAGAAGTATCGCATCATCGAGCAGTTCCTCGGTCAAGGCATAAAAACAATAATCAACCTGCAGCGCCCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CAA 90 bp | TTCACTTCCTCCTTTTCAACAAACTCATTTAAGTTTGCCAGGGCTTaGGCCGCCAGTATTCTCCTTGCTTCAGCACTCAGTTCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FTSSFSTNSFKFARA*AASILLASALSSGC Trigger: GCAGCCTGAACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTGTTGAAAAGGAGGAAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS GCA 72 bp | TCCACATCCTCTTTGGTGATTACAGGCTCTTTCAGTTaGTCAACCCAAGACCACATCAAACTGCACAAGATG | + |
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Preference number: 6 (lower is better) Translates to: STSSLVITGSFS*STQDHIKLHKM Trigger: CATCTTGTGCAGTTTGATGTGGTCTTGGGTTGAGCAACTGAAAGAGCCTGTAATCACCAAAGAGGATGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS GCA 72 bp | TTTTCTCCTCACCATCCATGTGTGCAGCATGCCCACTaGTATTCACCAACGTGGAATATGGATCTTCATTCT | + |
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Preference number: 6 (lower is better) Translates to: FSPHHPCVQHAH*YSPTWNMDLHS Trigger: AGAATGAAGATCCATATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCACACATGGATGGTGAGGAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
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| CDS GCA 72 bp | TCTCAAGATAAGCATTTTCTCCTCACCATCCATGTGTaGAGCATGCCCACTGCTATTCACCAACGTGGAATA | + |
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Preference number: 6 (lower is better) Translates to: SQDKHFLLTIHV*SMPTAIHQRGI Trigger: TATTCCACGTTGGTGAATAGCAGTGGGCATGCTGCACACATGGATGGTGAGGAGAAAATGCTTATCTTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000222028.2 |
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| CDS CCA 72 bp | CCTTTTCAACAAACTCATTTAAGTTTGCCAGGGCTTTaGCCGCCAGTATTCTCCTTGCTTCAGCACTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: PFQQTHLSLPGL*PPVFSLLQHSV Trigger: AACTGAGTGCTGAAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTGTTGAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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| CDS CAA 72 bp | TTTTCACTTCCTCCTTTTCAACAAACTCATTTAAGTTaGCCAGGGCTTTGGCCGCCAGTATTCTCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: FSLPPFQQTHLS*PGLWPPVFSLL Trigger: AAGCAAGGAGAATACTGGCGGCCAAAGCCCTGGCAAACTTAAATGAGTTTGTTGAAAAGGAGGAAGTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000035824.11 ENSMUST00000222028.2 ENSMUST00000238995.2 |
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