Pregenerated sensors for PTPA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039515Ensembl transcript IDs: ENSMUST00000042055.10, ENSMUST00000113601.10, ENSMUST00000113603.10, ENSMUST00000125561.7, ENSMUST00000131476.8, ENSMUST00000136009.3, ENSMUST00000152165.8
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGAAGGGAGCCAGGAAGGCAGTGGCCTGGCCCTGGAAGGAAGCTaGCACTGGGCTTTTCCTGGGGAACTGCCTGTGACTCTGATGACT | + |
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Preference number: 1 (lower is better) Translates to: REGSQEGSGLALEGS*HWAFPGELPVTLMT Trigger: AGTCATCAGAGTCACAGGCAGTTCCCCAGGAAAAGCCCAGTGCCAGCTTCCTTCCAGGGCCAGGCCACTGCCTTCCTGGCTCCCTTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 |
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| 3UTR TCA 90 bp | GTCAGGAAACCTAGCAAAGCCAAGGGCCAGGGAACAAAGCCAGCATaGGGATGGACACAGGTCCCCCAGGGCCTAGGATGGTACCTTGAG | + |
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Preference number: 1 (lower is better) Translates to: VRKPSKAKGQGTKPA*GWTQVPQGLGWYLE Trigger: CTCAAGGTACCATCCTAGGCCCTGGGGGACCTGTGTCCATCCTCATGCTGGCTTTGTTCCCTGGCCCTTGGCTTTGCTAGGTTTCCTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| 3UTR CCA 90 bp | GATGTGACGGGATGGATGGGCAGCAGGCTCCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCCAGGCACTTCCCTTACCCCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: DVTGWMGSRLPNLKC*ITGNFSRHFPYPRQ Trigger: CTGTCTGGGGTAAGGGAAGTGCCTGGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCTGCCCATCCATCCCGTCACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| 3UTR TCA 90 bp | AGCATGAGGATGGACACAGGTCCCCCAGGGCCTAGGATGGTACCTTaGGAAGACCAGCCTCATCATCCATGGCCCCTACAAACCAACCTC | + |
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Preference number: 1 (lower is better) Translates to: SMRMDTGPPGPRMVP*EDQPHHPWPLQTNL Trigger: GAGGTTGGTTTGTAGGGGCCATGGATGATGAGGCTGGTCTTCTCAAGGTACCATCCTAGGCCCTGGGGGACCTGTGTCCATCCTCATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| 3UTR TCA 90 bp | AATCCCCGCTCTGCCCAGACCATAGTTAATTCCTGGCCAAGCCCCTaGGTTGTGCTTCTCAGTGTCCACTCCACAAAGCTAAGCGGGCAC | + |
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Preference number: 1 (lower is better) Translates to: NPRSAQTIVNSWPSP*VVLLSVHSTKLSGH Trigger: GTGCCCGCTTAGCTTTGTGGAGTGGACACTGAGAAGCACAACTCAGGGGCTTGGCCAGGAATTAACTATGGTCTGGGCAGAGCGGGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 |
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| 3UTR TCA 90 bp | ACACAACAGTCCTACTGCCTCCCGGAGTCTCTTCCTCTCCCTGCTTaGCAGCTCTGGAAAGTCAGATCTCACCCAAGCAATGGGCTTTCC | + |
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Preference number: 1 (lower is better) Translates to: TQQSYCLPESLPLPA*QLWKVRSHPSNGLS Trigger: GGAAAGCCCATTGCTTGGGTGAGATCTGACTTTCCAGAGCTGTCAAGCAGGGAGAGGAAGAGACTCCGGGAGGCAGTAGGACTGTTGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR TCA 90 bp | AAAGCCTGCAGGTTCCAGTTCAGCCACACGCTGAGAGAAAACTGGTaGCTGTGGCTAGGTCCCCTTAGCAGCCCTACCCATTCTGAGTCT | + |
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Preference number: 1 (lower is better) Translates to: KACRFQFSHTLRENW*LWLGPLSSPTHSES Trigger: AGACTCAGAATGGGTAGGGCTGCTAAGGGGACCTAGCCACAGTCACCAGTTTTCTCTCAGCGTGTGGCTGAACTGGAACCTGCAGGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR GCA 90 bp | CACTGGCGGGGTTTCATCAATCCACCTATCCAGCGTATCAAGAAGTaGCACCAGCTTCTCGATGGCCTCAGAGACTTTGTAGTCGAAGGT | + |
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Preference number: 1 (lower is better) Translates to: HWRGFINPPIQRIKK*HQLLDGLRDFVVEG Trigger: ACCTTCGACTACAAAGTCTCTGAGGCCATCGAGAAGCTGGTGGCACTTCTTGATACGCTGGATAGGTGGATTGATGAAACCCCGCCAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152165.8 |
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| 3UTR CCA 90 bp | CAATCCACCTATCCAGCGTATCAAGAAGTGCCACCAGCTTCTCGATaGCCTCAGAGACTTTGTAGTCGAAGGTCAGCTTCTTCCCCTTCA | + |
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Preference number: 1 (lower is better) Translates to: QSTYPAYQEVPPASR*PQRLCSRRSASSPS Trigger: TGAAGGGGAAGAAGCTGACCTTCGACTACAAAGTCTCTGAGGCCATCGAGAAGCTGGTGGCACTTCTTGATACGCTGGATAGGTGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152165.8 |
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| 3UTR GCA 90 bp | GTCAAAAACTGGGCACACTGTGGTCAATTCCCCCAACTCAGGCCCTaGTTAGCACCCATCTCAGTAAACAGCCTCTCATCAAACAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: VKNWAHCGQFPQLRP*LAPISVNSLSSNRK Trigger: CTTTCTGTTTGATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGGAATTGACCACAGTGTGCCCAGTTTTTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR GCA 90 bp | GGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGGTGGGCGGGAGGGGTaGTGGGTCACAGAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: GRAGDHVQAPLFLLGHQTGGREG*WVTEST Trigger: TGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACC...CGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR GCA 90 bp | GGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTGGTGGGCGGGAGGGGTaGTGGGTCACAGAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: GDHVQAPLFLLGHQTEDSGGREG*WVTEST Trigger: TGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACC...ACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR TCA 90 bp | GGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGGGAAAGGGGGAGCAATaGCAAGAGCAGGGTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GPGTTSRPLSSYSATRRRGKGEQ*QEQGVL Trigger: AAGGACACCCTGCTCTTGTCATTGCTCCCCCTTTCC...CCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGAAGAAAGAACAGAAGGTaGGCGGGAGGGGTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: WAGPGTTSRPLSSYSATRRKNRR*AGGVLG Trigger: ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCT...TCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR TCA 90 bp | GCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCAGGAGCCAGCCTCTCCTAGCCTaGTGTGACGGGATGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: AGCPCLLHMGLTVGGSRSQPLLA*CDGMDG Trigger: CCCATCCATCCCGTCACATCAGGCTAGGAGAGGCTG...GCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| 3UTR-3UTR CCA 90 bp | GAGGAAGCAGGAGCACAGGGATGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: EEAGAQGWAGPGTTSRPLPNLKC*ITGNFS Trigger: GGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGG...GAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGCTTCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| 3UTR-3UTR GCA 90 bp | ACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAAGGTGGGCGGGAGGGGTaGTGGGTCACAGAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: TTSRPLSSYSATRRRTVKGGREG*WVTEST Trigger: TGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACC...TTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR GCA 90 bp | GGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGCTCCCGAACTTGAAGTaGTGGATCACAGGGAACTTC | + |
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Preference number: 2 (lower is better) Translates to: GPGTTSRPLSSYSATRRRLPNLK*WITGNF Trigger: GAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAG...CCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| 3UTR-3UTR CCA 90 bp | GGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTAGAAAGAACAGAAGGTaGGCGGGAGGGGTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: GDHVQAPLFLLGHQTEDSRKNRR*AGGVLG Trigger: ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCT...ACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR CCA 90 bp | ACAGAAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAAGAAAGAACAGAAGGTaGGCGGGAGGGGTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: TEGGREGCWVTESTGTWPRKNRR*AGGVLG Trigger: ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCT...TGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTTCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGAGAAGACCAGCCTCATCATCCATGGCCCCTACAAACCAACCTCCCCCAGCAGGAGCACAGGGATaGGCAGGGCCGGGGACCACG | + |
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Preference number: 2 (lower is better) Translates to: TLRRPASSSMAPTNQPPPAGAQG*AGPGTT Trigger: CGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGC...TGGGGGAGGTTGGTTTGTAGGGGCCATGGATGATGAGGCTGGTCTTCTCAAGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCAGGAGCACAGGAGAAAGAACAGAAGGTaGGCGGGAGGGGTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VSLSPPHGPDRGRKQEHRRKNRR*AGGVLG Trigger: ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCT...CCTGTGCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR TCA 90 bp | GGGTCACAGAGAGCACAGGAACCTGGCCAGGGTGGCTCTGGTAGTTCAGCCTCTGCAGGCTCCCGAACTTaGAGTGCTGGATCACAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GSQRAQEPGQGGSGSSASAGSRT*SAGSQG Trigger: TCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGC...AGAGGCTGAACTACCAGAGCCACCCTGGCCAGGTTCCTGTGCTCTCTGTGACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| 3UTR-3UTR GCA 90 bp | AACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTGGTGGGCGGGAGGGGTaGTGGGTCACAGAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: NSLSSNRKNRRWAGGVLGGGREG*WVTEST Trigger: TGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACC...ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR GCA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTGTGGGAGGAGGGGGCTaGTACCTTCTTTGCTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RMGSEEGQAQVGQESLQVVGGGG*YLLCSP Trigger: GGGAGAGCAAAGAAGGTAGCAGCCCCCTCCTCCCAC...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR-3UTR CCA 90 bp | GACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGAGAAAGAACAGAAGGTaGGCGGGAGGGGTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: DKSRVSLSPPHGPDRGRKRKNRR*AGGVLG Trigger: ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCT...CTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR CCA 90 bp | GGCACGGAACTCCTGCTCTTAATGAGGGAACCATTACATCATGGGGAGGAAAGGGCAGGAGCACAGGGATaGGCAGGGCCGGGGACCACG | + |
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Preference number: 2 (lower is better) Translates to: GTELLLLMREPLHHGEERAGAQG*AGPGTT Trigger: CGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGC...CCTTTCCTCCCCATGATGTAATGGTTCCCTCATTAAGAGCAGGAGTTCCGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGGGAGGAGGGGGCTGCTACCTTCTTTGCTCTCCCACACGAGCCACAAACCGGGAAAGGGGGAGCAATaGCAAGAGCAGGGTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: SGRRGLLPSLLSHTSHKPGKGEQ*QEQGVL Trigger: AAGGACACCCTGCTCTTGTCATTGCTCCCCCTTTCC...CGGTTTGTGGCTCGTGTGGGAGAGCAAAGAAGGTAGCAGCCCCCTCCTCCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR-3UTR GCA 90 bp | ATGACAGCCTCACCCTTCAGCTCCATAGCAGATACCCAGTGGAACACAGCTAGCGGTGGGCGGGAGGGGTaGTGGGTCACAGAGAGCACA | + |
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Preference number: 2 (lower is better) Translates to: MTASPFSSIADTQWNTASGGREG*WVTEST Trigger: TGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACC...GCTAGCTGTGTTCCACTGGGTATCTGCTATGGAGCTGAAGGGTGAGGCTGTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAAGTCAGATCTCACCCAAGCAATGGGCTTTCCCAGGAGCCCAGGGCAGCCCCCAGGGCCTAGGATaGTACCTTGAGAAGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LESQISPKQWAFPGAQGSPQGLG*YLEKTS Trigger: GCTGGTCTTCTCAAGGTACCATCCTAGGCCCTGGGG...GCTGCCCTGGGCTCCTGGGAAAGCCCATTGCTTGGGTGAGATCTGACTTTCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGACCAGCCTCATCATCCATGGCCCCTACAAACCAACCTCCCCCAACCCCGGAAAGGGGGAGCAATaGCAAGAGCAGGGTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: EKTSLIIHGPYKPTSPNPGKGEQ*QEQGVL Trigger: AAGGACACCCTGCTCTTGTCATTGCTCCCCCTTTCC...GGGGTTGGGGGAGGTTGGTTTGTAGGGGCCATGGATGATGAGGCTGGTCTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGCTACCTTCTTTGCTCTCCCACACGAGCCACAAACCGACCCAAGGGAGGGAACCATTACATCATaGGGAGGAAAGGGGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: GAATFFALPHEPQTDPREGTITS*GGKGEQ Trigger: TTGCTCCCCCTTTCCTCCCCATGATGTAATGGTTCC...CTCCCTTGGGTCGGTTTGTGGCTCGTGTGGGAGAGCAAAGAAGGTAGCAGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR-3UTR CCA 90 bp | AACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCAGCAGCTTCAGAAGTaGGAGGGGCACACAGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: NSLSSNRKNRRWAGGVLGQQLQK*EGHTEE Trigger: CTCCTCTGTGTGCCCCTCCCACTTCTGAAGCTGCTG...ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCTACCTTCTTTGCTCTCCCACACGAGCCACAAACCGACCCAAGGGAGCGGAGTCTCTTCCTCTCCCTaGTTGACAGCTCTGGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: LLPSLLSHTSHKPTQGSGVSSSP*LTALES Trigger: ACTTTCCAGAGCTGTCAAGCAGGGAGAGGAAGAGAC...TCCGCTCCCTTGGGTCGGTTTGTGGCTCGTGTGGGAGAGCAAAGAAGGTAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR-3UTR CCA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTGGAACCATTACATCATaGGGAGGAAAGGGGGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: RMGSEEGQAQVGQESLQVGTITS*GGKGEQ Trigger: TTGCTCCCCCTTTCCTCCCCATGATGTAATGGTTCC...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR-3UTR CCA 90 bp | GGGGGAGCAATGACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCAGGACAGTCAAAAACTaGGCACACTGTGGTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: GGAMTRAGCPCLLHMGLTRTVKN*AHCGQF Trigger: GAATTGACCACAGTGTGCCCAGTTTTTGACTGTCCT...GGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATTGCTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR GCA 90 bp | CACTCAGCAGGCAGAGGCAGCAGAATCAGCAGGCCTGAGACTGACTGGAGAAAAGTCTCTTCCTCTCCCTaGTTGACAGCTCTGGAAAGT | + |
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Preference number: 2 (lower is better) Translates to: HSAGRGSRISRPETDWRKVSSSP*LTALES Trigger: ACTTTCCAGAGCTGTCAAGCAGGGAGAGGAAGAGAC...TTTTCTCCAGTCAGTCTCAGGCCTGCTGATTCTGCTGCCTCTGCCTGCTGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGACCAGCCTCATCATCCATGGCCCCTACAAACCAACCTCCCCCAACCCCAGGACAGTCAAAAACTaGGCACACTGTGGTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: EKTSLIIHGPYKPTSPNPRTVKN*AHCGQF Trigger: GAATTGACCACAGTGTGCCCAGTTTTTGACTGTCCT...GGGGTTGGGGGAGGTTGGTTTGTAGGGGCCATGGATGATGAGGCTGGTCTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCAAGGACAGTCAAAAACTaGGCACACTGTGGTCAATTC | + |
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Preference number: 2 (lower is better) Translates to: QPLIKQKEQKVGGRGAGSRTVKN*AHCGQF Trigger: GAATTGACCACAGTGTGCCCAGTTTTTGACTGTCCT...TGACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| 3UTR-3UTR CCA 90 bp | AAAGGGGGAGCAATGACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGAGGACAGTCAAAAACTaGGCACACTGTGGTCAATTC | + |
|
Preference number: 2 (lower is better) Translates to: KGGAMTRAGCPCLLHMGLRTVKN*AHCGQF Trigger: GAATTGACCACAGTGTGCCCAGTTTTTGACTGTCCT...CAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATTGCTCCCCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR TCA 72 bp | CAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTaGCCGTGGGAGGAAGCAGGAGCACAGGGATGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: QEQGVLVSSTWA*PWEEAGAQGWA Trigger: TGCCCATCCCTGTGCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR TCA 72 bp | CCTAGCAAAGCCAAGGGCCAGGGAACAAAGCCAGCATaGGGATGGACACAGGTCCCCCAGGGCCTAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: PSKAKGQGTKPA*GWTQVPQGLGW Trigger: CCATCCTAGGCCCTGGGGGACCTGTGTCCATCCTCATGCTGGCTTTGTTCCCTGGCCCTTGGCTTTGCTAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGAAGAGCAGGGTGTCCTaGTCTCCTCCACATGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: DKSRVSLSPPHGPDRGRKKSRVS*SPPHGP Trigger: AGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTT...CTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTGGGCTGCTACCTTCTTaGCTCTCCCACACGAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RMGSEEGQAQVGQESLQVGLLPS*LSHTSH Trigger: GTGGCTCGTGTGGGAGAGCAAAGAAGGTAGCAGCCC...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCCTCACCCTTCAGCTCCATAGCAGATACCCAGTGGAACACAGCTAGCGGGAAGAGCAGGGTGTCCTaGTCTCCTCCACATGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TASPFSSIADTQWNTASGKSRVS*SPPHGP Trigger: AGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTT...CCCGCTAGCTGTGTTCCACTGGGTATCTGCTATGGAGCTGAAGGGTGAGGCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 |
||
| 3UTR GCA 72 bp | ACGGGATGGATGGGCAGCAGGCTCCCGAACTTGAAGTaGTGGATCACAGGGAACTTCTCCAGGCACTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: TGWMGSRLPNLK*WITGNFSRHFP Trigger: AGGGAAGTGCCTGGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCTGCCCATCCATCCCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
||
| 3UTR-3UTR CAA 90 bp | CACTCAGCAGGCAGAGGCAGCAGAATCAGCAGGCCTGAGACTGACTGGAGAAAAAAGAGCAGGGTGTCCTaGTCTCCTCCACATGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSAGRGSRISRPETDWRKKSRVS*SPPHGP Trigger: AGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTT...TTTTCTCCAGTCAGTCTCAGGCCTGCTGATTCTGCTGCCTCTGCCTGCTGAGTG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| 3UTR GCA 72 bp | GTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTaGAGGTTCCAGTTCAGCCACACGCTGAGAGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VKKGRPKWDRKA*RFQFSHTLREN Trigger: GTTTTCTCTCAGCGTGTGGCTGAACTGGAACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| 3UTR CCA 72 bp | TCTTACTCGGCCACCAGACGGAGGACAGTCAAAAACTaGGCACACTGTGGTCAATTCCCCCAACTCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SYSATRRRTVKN*AHCGQFPQLRP Trigger: GGGCCTGAGTTGGGGGAATTGACCACAGTGTGCCCAGTTTTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR CCA 72 bp | GGATGGATGGGCAGCAGGCTCCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCCAGGCACTTCCCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: GWMGSRLPNLKC*ITGNFSRHFPY Trigger: GTAAGGGAAGTGCCTGGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCTGCCCATCCATCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
||
| 3UTR TCA 72 bp | AGGTTCCAGTTCAGCCACACGCTGAGAGAAAACTGGTaGCTGTGGCTAGGTCCCCTTAGCAGCCCTACCCAT | + |
|
Preference number: 3 (lower is better) Translates to: RFQFSHTLRENW*LWLGPLSSPTH Trigger: ATGGGTAGGGCTGCTAAGGGGACCTAGCCACAGTCACCAGTTTTCTCTCAGCGTGTGGCTGAACTGGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| 3UTR CCA 72 bp | GTAAACAGCCTCTCATCAAACAGAAAGAACAGAAGGTaGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: VNSLSSNRKNRR*AGGVLGHREHR Trigger: CCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR TCA 72 bp | GGAACCATTACATCATGGGGAGGAAAGGGGGAGCAATaGCAAGAGCAGGGTGTCCTTGTCTCCTCCACATGG | + |
|
Preference number: 3 (lower is better) Translates to: GTITSWGGKGEQ*QEQGVLVSSTW Trigger: CCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATTGCTCCCCCTTTCCTCCCCATGATGTAATGGTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR TCA 72 bp | TCCTACTGCCTCCCGGAGTCTCTTCCTCTCCCTGCTTaGCAGCTCTGGAAAGTCAGATCTCACCCAAGCAAT | + |
|
Preference number: 3 (lower is better) Translates to: SYCLPESLPLPA*QLWKVRSHPSN Trigger: ATTGCTTGGGTGAGATCTGACTTTCCAGAGCTGTCAAGCAGGGAGAGGAAGAGACTCCGGGAGGCAGTAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| 3UTR GCA 72 bp | TGGGCACACTGTGGTCAATTCCCCCAACTCAGGCCCTaGTTAGCACCCATCTCAGTAAACAGCCTCTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: WAHCGQFPQLRP*LAPISVNSLSS Trigger: TGATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGGAATTGACCACAGTGTGCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR-3UTR CAA 90 bp | ATCCAGCGTATCAAGAAGTGCCACCAGCTTCTCGATGGCCTCAGAGACTTTGTACCCTTCACACCTTCATaGAGGGTAAGGATGAAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: IQRIKKCHQLLDGLRDFVPFTPS*RVRMKP Trigger: TGGCTTCATCCTTACCCTCAATGAAGGTGTGAAGGG...TACAAAGTCTCTGAGGCCATCGAGAAGCTGGTGGCACTTCTTGATACGCTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152165.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGCCTGATGTGACGGGATaGATGGGCAGCAGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDHVQAPLFLLGHQTPDVTG*MGSRLP Trigger: CGGGAGCCTGCTGCCCATCCATCCCGTCACATCAGG...CGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | GGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGTGGAGGGGTCTCTTCTaGAGAATCTGGCGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDHVQAPLFLLGHQTWRGLF*RIWRRL Trigger: CAGCCGCCGCCAGATTCTTCAGAAGAGACCCCTCCA...CGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCCTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | GCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACCCTGATGTGACGGGATaGATGGGCAGCAGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AGDHVQAPLFLLGHQTEDPDVTG*MGSRLP Trigger: CGGGAGCCTGCTGCCCATCCATCCCGTCACATCAGG...GTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAGCAGGAGCACAGGGATGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCTGCAGGCTCCCGAACTTaGAGTGCTGGATCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RKQEHRDGQGRGPRPGPSAGSRT*SAGSQG Trigger: TCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGC...AGAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGCTTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCAGGAGCACAGGGATGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCATCCACGAAATGTCTaGGCTCCAGGTGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RKQEHRDGQGRGPRPGPSHPRNV*APGGGG Trigger: ACCACCCCCACCTGGAGCCCAGACATTTCGTGGATG...AGAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGCTTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGTGTTCCACAGCTGGTTaGAGTGTTCCGCAAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRAGDHVQAPLFLLGHQTCSTAG*SVPQRG Trigger: GCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACA...CGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | GTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCAGGAGCACAGGGGTGGGGGTGGTCTATaGGCTGTGAGCTGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSLSPPHGPDRGRKQEHRGGGGL*AVSCPR Trigger: TCTGGGGCAGCTCACAGCTCATAGACCACCCCCACC...CCTGTGCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGGAGCACAGGGATGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTCCTTCAGGTAAACTaGCACTTCAGGCACAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQEHRDGQGRGPRPGPSLLQVN*HFRHSS Trigger: GCTGCTGTGCCTGAAGTGGCAGTTTACCTGAAGGAG...AGAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGCTTCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGTGTCTGGGCTCCAGGTaGGGGTGGTCTATGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRWAGGVLGHREHRNLARCLGSR*GWSMSC Trigger: ACAGCTCATAGACCACCCCCACCTGGAGCCCAGACA...CCTGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | GACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCCCATACGCCCTGGCTaGCTGCAGGCTCCATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DKSRVSLSPPHGPDRGRKPIRPG*LQAPSC Trigger: ACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGG...CTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAGTCAGATCTCACCCAAGCAATGGGCTTTCCCAGGAGCCCAGGGCAGCCAGCAGCCAGGTGGGTaGGGACCACTGTGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LESQISPKQWAFPGAQGSQQPGG*GPLWPP Trigger: TGGTGGCCACAGTGGTCCCCACCCACCTGGCTGCTG...GCTGCCCTGGGCTCCTGGGAAAGCCCATTGCTTGGGTGAGATCTGACTTTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR TCA 90 bp | GACGGGATGGATGGGCAGCAGGCTCCCGAACTTGAAGTGCTGGATCACAGGGAAGGTGGGGGTGGTCTATaGGCTGTGAGCTGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DGMDGQQAPELEVLDHREGGGGL*AVSCPR Trigger: TCTGGGGCAGCTCACAGCTCATAGACCACCCCCACC...TTCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCTGCCCATCCATCCCGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | GAGGAAGCAGGAGCACAGGGATGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCGGAGTACACCAATCTTaGAGAGACAACAGAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: EEAGAQGWAGPGTTSRPLGVHQS*RDNRGK Trigger: CTTTCCTCTGTTGTCTCTGCAAGATTGGTGTACTCC...GAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGCTTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCAGGAGCACAGGTACGCCCTGGCTGCCTaGAGGCTCCATCCTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLSPPHGPDRGRKQEHRYALAA*RLHPVC Trigger: ACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTA...CCTGTGCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | AGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGGTGCTCCCGAACTTGAAGTaGTGGATCACAGGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RWAGGVLGHREHRNLARVLPNLK*WITGNF Trigger: GAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAG...CACCCTGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | GCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACCCACCAGCTTCTCGATaGCCTCAGAGACTTTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGDHVQAPLFLLGHQTEDPPASR*PQRLCS Trigger: ACTACAAAGTCTCTGAGGCCATCGAGAAGCTGGTGG...GTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042055.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGAAGGCTGGTCCACTaGCGGGGTTTCATCAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TEGGREGCWVTESTGTWPGRLVH*RGFINP Trigger: TGGATTGATGAAACCCCGCCAGTGGACCAGCCTTCC...TGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042055.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGGTGGGGACCACTGTaGCCACCAAGTTTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TEGGREGCWVTESTGTWPGWGPL*PPSFLL Trigger: AAGCAGAAAACTTGGTGGCCACAGTGGTCCCCACCC...TGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGAAGACAATAGCCACCTaGTCGTCCACCCGGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RRWAGGVLGHREHRNLARKTIAT*SSTRST Trigger: TGTACTCCGGGTGGACGACCAGGTGGCTATTGTCTT...CCTGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCATGTTCCACAGCTGGTTaGAGTGTTCCGCAAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TEGGREGCWVTESTGTWPCSTAG*SVPQRG Trigger: GCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACA...TGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGTTSRPLSSYSATRRRIRMRP*FTLDQE Trigger: CTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAAT...CCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | AATGACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGTGGAGGGGTCTCTTCTaGAGAATCTGGCGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NDKSRVSLSPPHGPDRGRWRGLF*RIWRRL Trigger: CAGCCGCCGCCAGATTCTTCAGAAGAGACCCCTCCA...CCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR GCA 90 bp | GTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAAAACTGCCCATACGCCCTGGCTaGCTGCAGGCTCCATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQAPLFLLGHQTEDSQKLPIRPG*LQAPSC Trigger: ACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGG...CAGTTTTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGGAGCACAGGGATGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTCCAGGCACTCTaGCTTATACATTCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RKQEHRDGQGRGPRPGPSLLQAL*LIHSNE Trigger: CTCATTCGAATGTATAAGGCAGAGTGCCTGGAGAAG...AGAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCATCCCTGTGCTCCTGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | GACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAACATCCACGAAATGTCTaGGCTCCAGGTGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: DHVQAPLFLLGHQTEDSQHPRNV*APGGGG Trigger: ACCACCCCCACCTGGAGCCCAGACATTTCGTGGATG...TTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR CCA 90 bp | AGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGGTGATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RWAGGVLGHREHRNLARVIRMRP*FTLDQE Trigger: CTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAAT...CACCCTGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCCGGAGTCTCTTCCTCTCCCTGCTTGACAGCTCTGGAAAGTCAGATCCCTGATGTGACGGGATaGATGGGCAGCAGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LPPGVSSSPCLTALESQIPDVTG*MGSRLP Trigger: CGGGAGCCTGCTGCCCATCCATCCCGTCACATCAGG...GATCTGACTTTCCAGAGCTGTCAAGCAGGGAGAGGAAGAGACTCCGGGAGGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| 3UTR CAA 72 bp | GAGGAAAGGGGGAGCAATGACAAGAGCAGGGTGTCCTaGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: EERGSNDKSRVS*SPPHGPDRGRK Trigger: CTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATTGCTCCCCCTTTCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGGGAGCAATGACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTTGGAGGGGTCTCTTCTaGAGAATCTGGCGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ERGSNDKSRVSLSPPHGPWRGLF*RIWRRL Trigger: CAGCCGCCGCCAGATTCTTCAGAAGAGACCCCTCCA...AGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATTGCTCCCCCTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR TCA 90 bp | AAACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGGGTGGGGGTGGTCTATaGGCTGTGAGCTGCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KQPLIKQKEQKVGGRGAGGGGGL*AVSCPR Trigger: TCTGGGGCAGCTCACAGCTCATAGACCACCCCCACC...CCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR TCA 90 bp | CCCTTCAGCTCCATAGCAGATACCCAGTGGAACACAGCTAGCGGGGAACCCACCGCAGGCTCCCGAACTTaGAGTGCTGGATCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PFSSIADTQWNTASGEPTAGSRT*SAGSQG Trigger: TCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGC...GGTGGGTTCCCCGCTAGCTGTGTTCCACTGGGTATCTGCTATGGAGCTGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
||
| CDS-3UTR TCA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTGCAGGCTCCCGAACTTaGAGTGCTGGATCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RMGSEEGQAQVGQESLQVAGSRT*SAGSQG Trigger: TCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGC...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR GCA 90 bp | TGGGCAGGGCCGGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACTTCTCCAGGCACTCTaGCTTATACATTCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: WAGPGTTSRPLSSYSATRLLQAL*LIHSNE Trigger: CTCATTCGAATGTATAAGGCAGAGTGCCTGGAGAAG...TCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCCGGCCCTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR GCA 90 bp | TCTCCCACACGAGCCACAAACCGACCCAAGGGAGCGGAGCAGCAAGCCAAGGCCCTCCCGAACTTGAAGTaGTGGATCACAGGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPTRATNRPKGAEQQAKALPNLK*WITGNF Trigger: GAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAG...GGCCTTGGCTTGCTGCTCCGCTCCCTTGGGTCGGTTTGTGGCTCGTGTGGGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | CCCCCAACTCAGGCCCTGCTTAGCACCCATCTCAGTAAACAGCCTCTCATCAAACAGCAGCCAGGTGGGTaGGGACCACTGTGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PPTQALLSTHLSKQPLIKQQPGG*GPLWPP Trigger: TGGTGGCCACAGTGGTCCCCACCCACCTGGCTGCTG...TTTGATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | GTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCAGGAGCACAGGAAGACAATAGCCACCTaGTCGTCCACCCGGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VSLSPPHGPDRGRKQEHRKTIAT*SSTRST Trigger: TGTACTCCGGGTGGACGACCAGGTGGCTATTGTCTT...CCTGTGCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTACCTTCTTTGCTCTCCCACACGAGCCACAAACCGACCCAAGGGAGCGGATGTCTGGGCTCCAGGTaGGGGTGGTCTATGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLPSLLSHTSHKPTQGSGCLGSR*GWSMSC Trigger: ACAGCTCATAGACCACCCCCACCTGGAGCCCAGACA...TCCGCTCCCTTGGGTCGGTTTGTGGCTCGTGTGGGAGAGCAAAGAAGGTAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | TCTCCCACACGAGCCACAAACCGACCCAAGGGAGCGGAGCAGCAAGCCAAGGCCCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPTRATNRPKGAEQQAKAPNLKC*ITGNFS Trigger: GGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGG...GGCCTTGGCTTGCTGCTCCGCTCCCTTGGGTCGGTTTGTGGCTCGTGTGGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR TCA 90 bp | ACAGCCTCACCCTTCAGCTCCATAGCAGATACCCAGTGGAACACAGCTAGCGGGAGGAGGGGACAGCACTaGTGTTCCACAGCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TASPFSSIADTQWNTASGRRGQH*CSTAGW Trigger: CCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCT...CCCGCTAGCTGTGTTCCACTGGGTATCTGCTATGGAGCTGAAGGGTGAGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 |
||
| CDS-3UTR TCA 90 bp | GAAAGGGGGAGCAATGACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTAGGAGGGGACAGCACTaGTGTTCCACAGCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ERGSNDKSRVSLSPPHGPRRGQH*CSTAGW Trigger: CCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCT...AGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATTGCTCCCCCTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | GTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAAAACTGAGGAGGGGACAGCACTaGTGTTCCACAGCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQAPLFLLGHQTEDSQKLRRGQH*CSTAGW Trigger: CCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCT...CAGTTTTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | ACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCGCAGGCTCCCGAACTTaGAGTGCTGGATCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TASHQTERTEGGREGCWVAGSRT*SAGSQG Trigger: TCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGC...GACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR GCA 90 bp | CAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCATACGCCCTGGCTGCCTaGAGGCTCCATCCTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: QPLIKQKEQKVGGRGAGSYALAA*RLHPVC Trigger: ACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTA...TGACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | GTAAACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGCCCATACGCCCTGGCTaGCTGCAGGCTCCATCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VNSLSSNRKNRRWAGGVLPIRPG*LQAPSC Trigger: ACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGG...CAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR CCA 90 bp | AATGACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGGGGTGGGGACCACTGTaGCCACCAAGTTTTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NDKSRVSLSPPHGPDRGRGWGPL*PPSFLL Trigger: AAGCAGAAAACTTGGTGGCCACAGTGGTCCCCACCC...CCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCCATCCACGAAATGTCTaGGCTCCAGGTGGGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TASHQTERTEGGREGCWVHPRNV*APGGGG Trigger: ACCACCCCCACCTGGAGCCCAGACATTTCGTGGATG...GACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR CCA 90 bp | ACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAATGTTCCACAGCTGGTTaGAGTGTTCCGCAAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTSRPLSSYSATRRRTVKCSTAG*SVPQRG Trigger: GCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACA...TTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | CTGCTACCTTCTTTGCTCTCCCACACGAGCCACAAACCGACCCAAGGGAGCGGATGTTCCACAGCTGGTTaGAGTGTTCCGCAAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPSLLSHTSHKPTQGSGCSTAG*SVPQRG Trigger: GCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACA...TCCGCTCCCTTGGGTCGGTTTGTGGCTCGTGTGGGAGAGCAAAGAAGGTAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | TGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCAGGAGCACAGGGCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CPCLLHMGLTVGGSRSTGPNLKC*ITGNFS Trigger: GGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGG...CCCTGTGCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| 3UTR CAA 72 bp | GATGTGACGGGATGGATGGGCAGCAGGCTCCCGAACTaGAAGTGCTGGATCACAGGGAACTTCTCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DVTGWMGSRLPN*KCWITGNFSRH Trigger: GTGCCTGGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCTGCCCATCCATCCCGTCACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
||
| CDS-3UTR TCA 90 bp | AACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTAGGAGGGGACAGCACTaGTGTTCCACAGCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLSSNRKNRRWAGGVLGRRGQH*CSTAGW Trigger: CCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCT...ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | GGGGACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCTTCCTGATCAAGTTTaGCATACCAGGTTCTGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GDHVQAPLFLLGHQTEDSLPDQV*HTRFCR Trigger: CCTACAGAACCTGGTATGCCAAACTTGATCAGGAAG...ACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042055.10 |
||
| CDS-3UTR CCA 90 bp | CTGCCTCCCGGAGTCTCTTCCTCTCCCTGCTTGACAGCTCTGGAAAGTCAGATCTGTTCCACAGCTGGTTaGAGTGTTCCGCAAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPGVSSSPCLTALESQICSTAG*SVPQRG Trigger: GCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACA...GATCTGACTTTCCAGAGCTGTCAAGCAGGGAGAGGAAGAGACTCCGGGAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCTGTTCCACAGCTGGTTaGAGTGTTCCGCAAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TASHQTERTEGGREGCWVCSTAG*SVPQRG Trigger: GCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACA...GACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTCCTGCTCTTAATGAGGGAACCATTACATCATGGGGAGGAAAGGGGGAGCCTGATGTGACGGGATaGATGGGCAGCAGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTPALNEGTITSWGGKGEPDVTG*MGSRLP Trigger: CGGGAGCCTGCTGCCCATCCATCCCGTCACATCAGG...CTCCCCCTTTCCTCCCCATGATGTAATGGTTCCCTCATTAAGAGCAGGAGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGTAAACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTCCTGATGTGACGGGATaGATGGGCAGCAGGCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSKQPLIKQKEQKVGGRGPDVTG*MGSRLP Trigger: CGGGAGCCTGCTGCCCATCCATCCCGTCACATCAGG...ACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTTTACTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | GTAAACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGAGGAGGGGACAGCACTaGTGTTCCACAGCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNSLSSNRKNRRWAGGVLRRGQH*CSTAGW Trigger: CCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCT...CAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR GCA 90 bp | GACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAGAGAGCGCTTCCATTTaGCCATATCTGGAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DHVQAPLFLLGHQTEDSQESASI*PYLELC Trigger: ACACAGTTCCAGATATGGGCAAATGGAAGCGCTCTC...TTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR GCA 90 bp | GTGTCCTTGTCTCCTCCACATGGGCCTGACCGTGGGAGGAAGCAGGAGCACAGGCTTCTCCAGGCACTCTaGCTTATACATTCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSLSPPHGPDRGRKQEHRLLQAL*LIHSNE Trigger: CTCATTCGAATGTATAAGGCAGAGTGCCTGGAGAAG...CCTGTGCTCCTGCTTCCTCCCACGGTCAGGCCCATGTGGAGGAGACAAGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTCATAGTCAATTCGTGTaGAGTTCCCCACAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RMGSEEGQAQVGQESLQVHSQFV*SSPQPP Trigger: AGGAGGCTGTGGGGAACTCCACACGAATTGACTATG...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CCA 90 bp | ACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAACCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTSRPLSSYSATRRRTVKPNLKC*ITGNFS Trigger: GGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGG...TTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR TCA 90 bp | GGCACGGAACTCCTGCTCTTAATGAGGGAACCATTACATCATGGGGAGGAAAGGAGGAGGGGACAGCACTaGTGTTCCACAGCTGGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTELLLLMREPLHHGEERRRGQH*CSTAGW Trigger: CCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCT...CCTTTCCTCCCCATGATGTAATGGTTCCCTCATTAAGAGCAGGAGTTCCGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 |
||
| CDS-3UTR TCA 90 bp | ACGGAACTCCTGCTCTTAATGAGGGAACCATTACATCATGGGGAGGAAAGGGGGGCAGGCTCCCGAACTTaGAGTGCTGGATCACAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TELLLLMREPLHHGEERGAGSRT*SAGSQG Trigger: TCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGC...CCCCCTTTCCTCCCCATGATGTAATGGTTCCCTCATTAAGAGCAGGAGTTCCGT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGATCACAGGGAACTTCTCCAGGCACTTCCCTTACCCCAGACAGCAGCTCAGCAAAGCAAGCATaGAGAAGGAGGTGCAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAGSQGTSPGTSLTPDSSSAKQA*RRRCSL Trigger: CAGACTGCACCTCCTTCTTCATGCTTGCTTTGCTGA...GCTGCTGTCTGGGGTAAGGGAAGTGCCTGGAGAAGTTCCCTGTGATCCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTGAGAGCGCTTCCATTTaGCCATATCTGGAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RMGSEEGQAQVGQESLQVESASI*PYLELC Trigger: ACACAGTTCCAGATATGGGCAAATGGAAGCGCTCTC...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| CDS-3UTR GCA 90 bp | ACGGAACTCCTGCTCTTAATGAGGGAACCATTACATCATGGGGAGGAAAGGGGGTACGCCCTGGCTGCCTaGAGGCTCCATCCTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: TELLLLMREPLHHGEERGYALAA*RLHPVC Trigger: ACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTA...CCCCCTTTCCTCCCCATGATGTAATGGTTCCCTCATTAAGAGCAGGAGTTCCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
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| CDS-3UTR GCA 90 bp | CGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAAAACTCTCCCGAACTTGAAGTaGTGGATCACAGGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPGPSLLTRPPDGGQSKTLPNLK*WITGNF Trigger: GAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAG...AGTTTTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS-3UTR CCA 90 bp | CTCAGTAAACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTTGTCTGGGCTCCAGGTaGGGGTGGTCTATGAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LSKQPLIKQKEQKVGGRGCLGSR*GWSMSC Trigger: ACAGCTCATAGACCACCCCCACCTGGAGCCCAGACA...ACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTTTACTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
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| CDS-3UTR CCA 90 bp | GAGAAGACCAGCCTCATCATCCATGGCCCCTACAAACCAACCTCCCCCAACCCCATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKTSLIIHGPYKPTSPNPIRMRP*FTLDQE Trigger: CTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAAT...GGGGTTGGGGGAGGTTGGTTTGTAGGGGCCATGGATGATGAGGCTGGTCTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| CDS-3UTR CCA 90 bp | TGGAAAGTCAGATCTCACCCAAGCAATGGGCTTTCCCAGGAGCCCAGGGCAGCTCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKVRSHPSNGLSQEPRAAPNLKC*ITGNFS Trigger: GGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGG...AGCTGCCCTGGGCTCCTGGGAAAGCCCATTGCTTGGGTGAGATCTGACTTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| CDS-3UTR TCA 90 bp | GTTTCATCAATCCACCTATCCAGCGTATCAAGAAGTGCCACCAGCTTCTCGATGTGGAGGGGTCTCTTCTaGAGAATCTGGCGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSSIHLSSVSRSATSFSMWRGLF*RIWRRL Trigger: CAGCCGCCGCCAGATTCTTCAGAAGAGACCCCTCCA...CATCGAGAAGCTGGTGGCACTTCTTGATACGCTGGATAGGTGGATTGATGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152165.8 |
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| CDS-3UTR GCA 90 bp | CAGGTCCCCCAGGGCCTAGGATGGTACCTTGAGAAGACCAGCCTCATCATCCATGAGAGCGCTTCCATTTaGCCATATCTGGAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVPQGLGWYLEKTSLIIHESASI*PYLELC Trigger: ACACAGTTCCAGATATGGGCAAATGGAAGCGCTCTC...ATGGATGATGAGGCTGGTCTTCTCAAGGTACCATCCTAGGCCCTGGGGGACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| CDS-3UTR GCA 90 bp | AGTGGGAGGAGGGGGCTGCTACCTTCTTTGCTCTCCCACACGAGCCACAAACCGATCCTGTATGTCTTCTaGAACTTCCGCATAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGRRGLLPSLLSHTSHKPILYVF*NFRITS Trigger: TGAGGTTATGCGGAAGTTGCAGAAGACATACAGGAT...CGGTTTGTGGCTCGTGTGGGAGAGCAAAGAAGGTAGCAGCCCCCTCCTCCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR GCA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTCTTCTCCAGGCACTCTaGCTTATACATTCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RMGSEEGQAQVGQESLQVLLQAL*LIHSNE Trigger: CTCATTCGAATGTATAAGGCAGAGTGCCTGGAGAAG...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
||
| CDS-3UTR GCA 90 bp | AACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCTCCCGAACTTGAAGTaGTGGATCACAGGGAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSLSSNRKNRRWAGGVLGLPNLK*WITGNF Trigger: GAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAG...ACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTCACCCTTCAGCTCCATAGCAGATACCCAGTGGAACACAGCTAGCGGGATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TASPFSSIADTQWNTASGIRMRP*FTLDQE Trigger: CTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAAT...CCCGCTAGCTGTGTTCCACTGGGTATCTGCTATGGAGCTGAAGGGTGAGGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAAGTCAGATCTCACCCAAGCAATGGGCTTTCCCAGGAGCCCAGGGCAGCTATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WKVRSHPSNGLSQEPRAAIRMRP*FTLDQE Trigger: CTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAAT...AGCTGCCCTGGGCTCCTGGGAAAGCCCATTGCTTGGGTGAGATCTGACTTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| CDS-3UTR TCA 90 bp | AGGATGGGCAGTGAAGAAGGGCAGGCCCAAGTGGGACAGGAAAGCCTGCAGGTTAAGTTTTCTGCTTCCTaGTCAAGTTTGGCATACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RMGSEEGQAQVGQESLQVKFSAS*SSLAYQ Trigger: CTGGTATGCCAAACTTGATCAGGAAGCAGAAAACTT...AACCTGCAGGCTTTCCTGTCCCACTTGGGCCTGCCCTTCTTCACTGCCCATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042055.10 |
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| CDS-3UTR GCA 90 bp | GGGAGCAATGACAAGAGCAGGGTGTCCTTGTCTCCTCCACATGGGCCTGACCGTATCCTGTATGTCTTCTaGAACTTCCGCATAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSNDKSRVSLSPPHGPDRILYVF*NFRITS Trigger: TGAGGTTATGCGGAAGTTGCAGAAGACATACAGGAT...ACGGTCAGGCCCATGTGGAGGAGACAAGGACACCCTGCTCTTGTCATTGCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS-3UTR GCA 90 bp | GACGGGATGGATGGGCAGCAGGCTCCCGAACTTGAAGTGCTGGATCACAGGGAAATCCTGTATGTCTTCTaGAACTTCCGCATAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DGMDGQQAPELEVLDHREILYVF*NFRITS Trigger: TGAGGTTATGCGGAAGTTGCAGAAGACATACAGGAT...TTCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCTGCCCATCCATCCCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| CDS-3UTR CCA 90 bp | CCCCCAACTCAGGCCCTGCTTAGCACCCATCTCAGTAAACAGCCTCTCATCAAACATAGTCAATTCGTGTaGAGTTCCCCACAGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PPTQALLSTHLSKQPLIKHSQFV*SSPQPP Trigger: AGGAGGCTGTGGGGAACTCCACACGAATTGACTATG...TTTGATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
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| CDS-3UTR CCA 90 bp | ATGACAGCCTCACCCTTCAGCTCCATAGCAGATACCCAGTGGAACACAGCTAGCCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTASPFSSIADTQWNTASPNLKC*ITGNFS Trigger: GGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGG...GCTAGCTGTGTTCCACTGGGTATCTGCTATGGAGCTGAAGGGTGAGGCTGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| CDS-3UTR GCA 90 bp | CCCCCAACTCAGGCCCTGCTTAGCACCCATCTCAGTAAACAGCCTCTCATCAAAGGAGTACACCAATCTTaGAGAGACAACAGAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PPTQALLSTHLSKQPLIKGVHQS*RDNRGK Trigger: CTTTCCTCTGTTGTCTCTGCAAGATTGGTGTACTCC...TTTGATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
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| CDS-3UTR GCA 90 bp | ATTCCCCCAACTCAGGCCCTGCTTAGCACCCATCTCAGTAAACAGCCTCTCATCCTTCTCCAGGCACTCTaGCTTATACATTCGAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IPPTQALLSTHLSKQPLILLQAL*LIHSNE Trigger: CTCATTCGAATGTATAAGGCAGAGTGCCTGGAGAAG...GATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS-3UTR GCA 90 bp | GTTTCATCAATCCACCTATCCAGCGTATCAAGAAGTGCCACCAGCTTCTCGATGGAGAGCGCTTCCATTTaGCCATATCTGGAACTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSIHLSSVSRSATSFSMESASI*PYLELC Trigger: ACACAGTTCCAGATATGGGCAAATGGAAGCGCTCTC...CATCGAGAAGCTGGTGGCACTTCTTGATACGCTGGATAGGTGGATTGATGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152165.8 |
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| CDS-3UTR CAA 90 bp | AAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGGTAGCAGGCTCCCGAACTaGAAGTGCTGGATCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVGGRGAGSQRAQEPGQGSRLPN*KCWITG Trigger: CCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCT...ACCCTGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS-3UTR CAA 90 bp | AAGGTGGGCGGGAGGGGTGCTGGGTCACAGAGAGCACAGGAACCTGGCCAGGGTATGTTCCACAGCTGGTaGGAGTGTTCCGCAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KVGGRGAGSQRAQEPGQGMFHSW*ECSAKG Trigger: CCCCTTTGCGGAACACTCCAACCAGCTGTGGAACAT...ACCCTGGCCAGGTTCCTGTGCTCTCTGTGACCCAGCACCCCTCCCGCCCACCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS-3UTR CAA 90 bp | ACCACGTCCAGGCCCCTCTCTTCTTACTCGGCCACCAGACGGAGGACAGTCAAAAGCAGGCTCCCGAACTaGAAGTGCTGGATCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TTSRPLSSYSATRRRTVKSRLPN*KCWITG Trigger: CCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCT...TTTGACTGTCCTCCGTCTGGTGGCCGAGTAAGAAGAGAGGGGCCTGGACGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS GCA 90 bp | GGGCAGGAACTGGAAGTCATCCAGACCCCATACGCCCTGGCTGCCTaGAGGCTCCATCCTGTATGTCTTCTGCAACTTCCGCATAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: GQELEVIQTPYALAA*RLHPVCLLQLPHNL Trigger: GAGGTTATGCGGAAGTTGCAGAAGACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGGGTCTGGATGACTTCCAGTTCCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
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| CDS CCA 90 bp | CAGATGAAGGGCAGGAACTGGAAGTCATCCAGACCCCATACGCCCTaGCTGCCTGCAGGCTCCATCCTGTATGTCTTCTGCAACTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: QMKGRNWKSSRPHTP*LPAGSILYVFCNFR Trigger: GCGGAAGTTGCAGAAGACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGGGTCTGGATGACTTCCAGTTCCTGCCCTTCATCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
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| CDS-3UTR CAA 90 bp | AGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCACAGCAGGCTCCCGAACTaGAAGTGCTGGATCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSNRKNRRWAGGVLGHSRLPN*KCWITG Trigger: CCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCT...GTGACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS-3UTR CAA 90 bp | ACAGCCTCTCATCAAACAGAAAGAACAGAAGGTGGGCGGGAGGGGTGCTGGGTCAGCAGGCTCCCGAACTaGAAGTGCTGGATCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TASHQTERTEGGREGCWVSRLPN*KCWITG Trigger: CCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCT...GACCCAGCACCCCTCCCGCCCACCTTCTGTTCTTTCTGTTTGATGAGAGGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS-3UTR CAA 90 bp | CACTCAGCAGGCAGAGGCAGCAGAATCAGCAGGCCTGAGACTGACTGGAGAAAAATGTTCCACAGCTGGTaGGAGTGTTCCGCAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSAGRGSRISRPETDWRKMFHSW*ECSAKG Trigger: CCCCTTTGCGGAACACTCCAACCAGCTGTGGAACAT...TTTTCTCCAGTCAGTCTCAGGCCTGCTGATTCTGCTGCCTCTGCCTGCTGAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 |
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| CDS-3UTR CAA 90 bp | ATGACAGCCTCACCCTTCAGCTCCATAGCAGATACCCAGTGGAACACAGCTAGCAGCAGGCTCCCGAACTaGAAGTGCTGGATCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MTASPFSSIADTQWNTASSRLPN*KCWITG Trigger: CCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCT...GCTAGCTGTGTTCCACTGGGTATCTGCTATGGAGCTGAAGGGTGAGGCTGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 |
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| CDS CCA 90 bp | CCAGGTTCTGTAGGCTTTGTTCCCAAACCGGGAAGGCTGGTCCACTaGCGGGGTTTCATCAATCCACCTATCCAGCGTATCAAGAAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGSVGFVPKPGRLVH*RGFINPPIQRIKKC Trigger: GCACTTCTTGATACGCTGGATAGGTGGATTGATGAAACCCCGCCAGTGGACCAGCCTTCCCGGTTTGGGAACAAAGCCTACAGAACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042055.10 |
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| CDS CCA 90 bp | GATGTGACGGGATGGATGGGCAGCAGGCTCCCGAACTTGAAGTGCTaGATCACAGGGAACTTCTCCAGGCACTCTGCCTTATACATTCGA | + |
|
Preference number: 5 (lower is better) Translates to: DVTGWMGSRLPNLKC*ITGNFSRHSALYIR Trigger: TCGAATGTATAAGGCAGAGTGCCTGGAGAAGTTCCCTGTGATCCAGCACTTCAAGTTCGGGAGCCTGCTGCCCATCCATCCCGTCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS-3UTR CAA 90 bp | ATTCCCCCAACTCAGGCCCTGCTTAGCACCCATCTCAGTAAACAGCCTCTCATCATGTTCCACAGCTGGTaGGAGTGTTCCGCAAAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: IPPTQALLSTHLSKQPLIMFHSW*ECSAKG Trigger: CCCCTTTGCGGAACACTCCAACCAGCTGTGGAACAT...GATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000125561.7 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS CCA 90 bp | GGGAACTTCTCCAGGCACTCTGCCTTATACATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAGGGGACAGCACTGATGTTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNFSRHSALYIRMRP*FTLDQEGTALMFHS Trigger: GCTGTGGAACATCAGTGCTGTCCCCTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAATGTATAAGGCAGAGTGCCTGGAGAAGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS CCA 90 bp | AGGAGGTGCAGTCTGTCCTCTGCCTTATACATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAGGGGACAGCACTGATGTTCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRCSLSSALYIRMRP*FTLDQEGTALMFHS Trigger: GCTGTGGAACATCAGTGCTGTCCCCTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAATGTATAAGGCAGAGGACAGACTGCACCTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| CDS GCA 90 bp | CCCCATACGCCCTGGCTGCCTGCAGGCTCCATCCTGTATGTCTTCTaGAACTTCCGCATAACCTCAAGATACCTATCAAACACCTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PHTPWLPAGSILYVF*NFRITSRYLSNTLK Trigger: CTTCAAGGTGTTTGATAGGTATCTTGAGGTTATGCGGAAGTTGCAGAAGACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CAA 90 bp | ATTCCCCCAACTCAGGCCCTGCTTAGCACCCATCTCAGTAAACAGCCTCTCATCCCCTTCACACCTTCATaGAGGGTAAGGATGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IPPTQALLSTHLSKQPLIPFTPS*RVRMKP Trigger: TGGCTTCATCCTTACCCTCAATGAAGGTGTGAAGGG...GATGAGAGGCTGTTTACTGAGATGGGTGCTAAGCAGGGCCTGAGTTGGGGGAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS-3UTR CAA 90 bp | CACGGAACTCCTGCTCTTAATGAGGGAACCATTACATCATGGGGAGGAAAGGGGCCCTTCACACCTTCATaGAGGGTAAGGATGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGTPALNEGTITSWGGKGPFTPS*RVRMKP Trigger: TGGCTTCATCCTTACCCTCAATGAAGGTGTGAAGGG...CCCCTTTCCTCCCCATGATGTAATGGTTCCCTCATTAAGAGCAGGAGTTCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
||
| CDS CCA 72 bp | GGCAGGAACTGGAAGTCATCCAGACCCCATACGCCCTaGCTGCCTGCAGGCTCCATCCTGTATGTCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GRNWKSSRPHTP*LPAGSILYVFC Trigger: GCAGAAGACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGGGTCTGGATGACTTCCAGTTCCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS CCA 72 bp | ACCGCCTTCTCATCCACGAAATGTCTGGGCTCCAGGTaGGGGTGGTCTATGAGCTGTGAGCTGCCCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TAFSSTKCLGSR*GWSMSCELPQM Trigger: CATCTGGGGCAGCTCACAGCTCATAGACCACCCCCACCTGGAGCCCAGACATTTCGTGGATGAGAAGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
||
| CDS GCA 72 bp | CTGGAAGTCATCCAGACCCCATACGCCCTGGCTGCCTaGAGGCTCCATCCTGTATGTCTTCTGCAACTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LEVIQTPYALAA*RLHPVCLLQLP Trigger: CGGAAGTTGCAGAAGACATACAGGATGGAGCCTGCAGGCAGCCAGGGCGTATGGGGTCTGGATGACTTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
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| CDS CAA 72 bp | GACCAGGAGGGGACAGCACTGATGTTCCACAGCTGGTaGGAGTGTTCCGCAAAGGGGCCAGTCTTCATCTCA | + |
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Preference number: 6 (lower is better) Translates to: DQEGTALMFHSW*ECSAKGPVFIS Trigger: TGAGATGAAGACTGGCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
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| CDS CCA 72 bp | GTAGGCTTTGTTCCCAAACCGGGAAGGCTGGTCCACTaGCGGGGTTTCATCAATCCACCTATCCAGCGTATC | + |
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Preference number: 6 (lower is better) Translates to: VGFVPKPGRLVH*RGFINPPIQRI Trigger: GATACGCTGGATAGGTGGATTGATGAAACCCCGCCAGTGGACCAGCCTTCCCGGTTTGGGAACAAAGCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042055.10 |
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| CDS CCA 72 bp | AGGCAGCCTCATGCCCTGTGCCATAGTCAATTCGTGTaGAGTTCCCCACAGCCTCCTTCAGGTAAACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: RQPHALCHSQFV*SSPQPPSGKLP Trigger: TGGCAGTTTACCTGAAGGAGGCTGTGGGGAACTCCACACGAATTGACTATGGCACAGGGCATGAGGCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
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| CDS CAA 72 bp | ATAGCCACCTGGTCGTCCACCCGGAGTACACCAATCTaGCAGAGACAACAGAGGAAAGCAGCAAAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: IATWSSTRSTPI*QRQQRKAAKAA Trigger: GGCTGCCTTTGCTGCTTTCCTCTGTTGTCTCTGCAAGATTGGTGTACTCCGGGTGGACGACCAGGTGGCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
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| CDS CAA 90 bp | TTGAAGACAATAGCCACCTGGTCGTCCACCCGGAGTACACCAATCTaGCAGAGACAACAGAGGAAAGCAGCAAAGGCAGCCTCATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: LKTIATWSSTRSTPI*QRQQRKAAKAASCP Trigger: AGGGCATGAGGCTGCCTTTGCTGCTTTCCTCTGTTGTCTCTGCAAGATTGGTGTACTCCGGGTGGACGACCAGGTGGCTATTGTCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
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| CDS CCA 72 bp | TCCAGGCACTCTGCCTTATACATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAGGGGACAGCACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SRHSALYIRMRP*FTLDQEGTALM Trigger: CATCAGTGCTGTCCCCTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAATGTATAAGGCAGAGTGCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000042055.10 ENSMUST00000113601.10 ENSMUST00000113603.10 ENSMUST00000131476.8 ENSMUST00000136009.3 |
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| CDS CAA 90 bp | TTCACTTTAGACCAGGAGGGGACAGCACTGATGTTCCACAGCTGGTaGGAGTGTTCCGCAAAGGGGCCAGTCTTCATCTCAGTGATGAAC | + |
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Preference number: 6 (lower is better) Translates to: FTLDQEGTALMFHSW*ECSAKGPVFISVMN Trigger: GTTCATCACTGAGATGAAGACTGGCCCCTTTGCGGAACACTCCAACCAGCTGTGGAACATCAGTGCTGTCCCCTCCTGGTCTAAAGTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 ENSMUST00000125561.7 |
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| CDS GCA 72 bp | CCCTGGCTGCCTGCAGGCTCCATCCTGTATGTCTTCTaGAACTTCCGCATAACCTCAAGATACCTATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: PWLPAGSILYVF*NFRITSRYLSN Trigger: GTTTGATAGGTATCTTGAGGTTATGCGGAAGTTGCAGAAGACATACAGGATGGAGCCTGCAGGCAGCCAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
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| CDS CCA 72 bp | AGTCTGTCCTCTGCCTTATACATTCGAATGAGGCCCTaGTTCACTTTAGACCAGGAGGGGACAGCACTGATG | + |
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Preference number: 6 (lower is better) Translates to: SLSSALYIRMRP*FTLDQEGTALM Trigger: CATCAGTGCTGTCCCCTCCTGGTCTAAAGTGAACCAGGGCCTCATTCGAATGTATAAGGCAGAGGACAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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| CDS CAA 72 bp | AACTTCCGCATAACCTCAAGATACCTATCAAACACCTaGAAGACAATAGCCACCTGGTCGTCCACCCGGAGT | + |
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Preference number: 6 (lower is better) Translates to: NFRITSRYLSNT*KTIATWSSTRS Trigger: ACTCCGGGTGGACGACCAGGTGGCTATTGTCTTCAAGGTGTTTGATAGGTATCTTGAGGTTATGCGGAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042055.10 ENSMUST00000113603.10 |
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| CDS GCA 72 bp | AAAGCAAGCATGAAGAAGGAGGTGCAGTCTGTCCTCTaGCTTATACATTCGAATGAGGCCCTGGTTCACTTT | + |
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Preference number: 6 (lower is better) Translates to: KASMKKEVQSVL*LIHSNEALVHF Trigger: AAAGTGAACCAGGGCCTCATTCGAATGTATAAGGCAGAGGACAGACTGCACCTCCTTCTTCATGCTTGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125561.7 |
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