Pregenerated sensors for PTP4A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059895Ensembl transcript IDs: ENSMUST00000053232.8, ENSMUST00000163582.9, ENSMUST00000165541.8, ENSMUST00000167582.8, ENSMUST00000230177.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAGCAAGGGATGGCCACCAGAGGGCGCCATGGAGGCACGCCACTaGAGCAGCAGTAGCAGCAGCAGCAATAGGACAGAAGAGATGGAG | + |
|
Preference number: 1 (lower is better) Translates to: QSKGWPPEGAMEARH*SSSSSSSNRTEEME Trigger: CTCCATCTCTTCTGTCCTATTGCTGCTGCTGCTACTGCTGCTGCAGTGGCGTGCCTCCATGGCGCCCTCTGGTGGCCATCCCTTGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 90 bp | AAGCAGGCAGCAGGTACCAGTGAGAGGCGCCCTGGATCTCTGTTCTaGGCACAGAGGGGACTGGGTCTGCAAAGGCCTGAGGATCACGTC | + |
|
Preference number: 1 (lower is better) Translates to: KQAAGTSERRPGSLF*AQRGLGLQRPEDHV Trigger: GACGTGATCCTCAGGCCTTTGCAGACCCAGTCCCCTCTGTGCCCAGAACAGAGATCCAGGGCGCCTCTCACTGGTACCTGCTGCCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR TCA 90 bp | GTGGAACTTGAAGAGGGAATGATGCAAGCAGGCAGCAGGTACCAGTaGGAGGCGCCCTGGATCTCTGTTCTGGGCACAGAGGGGACTGGG | + |
|
Preference number: 1 (lower is better) Translates to: VELEEGMMQAGSRYQ*EAPWISVLGTEGTG Trigger: CCCAGTCCCCTCTGTGCCCAGAACAGAGATCCAGGGCGCCTCTCACTGGTACCTGCTGCCTGCTTGCATCATTCCCTCTTCAAGTTCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 90 bp | GCCACTGCAGCAGCAGTAGCAGCAGCAGCAATAGGACAGAAGAGATaGAGACCATGGCCTCCCGGGATCCACACCCTATTCCCCTGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: ATAAAVAAAAIGQKR*RPWPPGIHTLFPCS Trigger: AGAGCAGGGGAATAGGGTGTGGATCCCGGGAGGCCATGGTCTCCATCTCTTCTGTCCTATTGCTGCTGCTGCTACTGCTGCTGCAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR TCA 90 bp | CCATGCCTGCATGGATGCTGCCATGCTCCCACCTTGATGACAGACTaGACCTCTGAACCTGTAAGGCAGCCCCAACTAAATGTTGTCCTT | + |
|
Preference number: 1 (lower is better) Translates to: PCLHGCCHAPTLMTD*TSEPVRQPQLNVVL Trigger: AAGGACAACATTTAGTTGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCTGTCATCAAGGTGGGAGCATGGCAGCATCCATGCAGGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR TCA 90 bp | GCATGGATGCTGCCATGCTCCCACCTTGATGACAGACTGAACCTCTaGACCTGTAAGGCAGCCCCAACTAAATGTTGTCCTTGTAAGAGT | + |
|
Preference number: 1 (lower is better) Translates to: AWMLPCSHLDDRLNL*TCKAAPTKCCPCKS Trigger: ACTCTTACAAGGACAACATTTAGTTGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCTGTCATCAAGGTGGGAGCATGGCAGCATCCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 90 bp | ATCTCAGCAACCACATGGTGGCTCACAACCACCGGTAATGAGATCTaGCGTCCTCTTCTGGTATGTCTGAAGACAGCAACAGTGTACTTA | + |
|
Preference number: 1 (lower is better) Translates to: ISATTWWLTTTGNEI*RPLLVCLKTATVYL Trigger: TAAGTACACTGTTGCTGTCTTCAGACATACCAGAAGAGGACGCCAGATCTCATTACCGGTGGTTGTGAGCCACCATGTGGTTGCTGAGAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCCAGTGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGTGAGGGACAGGGGTTaGACAGGACTGGCAGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: AQWFKNSHLQYTGQGEGLVRDRG*TGLAEG Trigger: ACCCTCTGCCAGTCCTGTCCAACCCCTGTCCCTCAC...CAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCACTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGGCAGTTCAGAAAGACAGCCGTaGGTACAGATGGGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: WFKNSHLQYTGQGEGLGSSERQP*VQMGTE Trigger: CTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGA...ACTGCCCAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAATATGGCACCGGGGTAGTGAGTTTCCAGCCCACACAAGGTCACCATTACAAGAGATGGAGACCATaGCCTCCCGGGATCCACACC | + |
|
Preference number: 2 (lower is better) Translates to: WKYGTGVVSFQPTQGHHYKRWRP*PPGIHT Trigger: GGTGTGGATCCCGGGAGGCCATGGTCTCCATCTCTT...GTAATGGTGACCTTGTGTGGGCTGGAAACTCACTACCCCGGTGCCATATTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGGATGAGGTCCTAGGCAGACCCATGTCACCAAAGGCCATCTACACTCAGCATGAAGGTCGGGGGTaGAGGCCACTGAAAGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KQDEVLGRPMSPKAIYTQHEGRG*RPLKVP Trigger: TGGAACTTTCAGTGGCCTCCACCCCCGACCTTCATG...CTGAGTGTAGATGGCCTTTGGTGACATGGGTCTGCCTAGGACCTCATCCTGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCATGCCTGCATGGATGCTGCCATGCTCCCACCTTGATGACAGACTGAACCTCGAAGAGTCAGCCCACTaGTCAGAACTTATAAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PMPAWMLPCSHLDDRLNLEESAH*SELISR Trigger: CCTGCTTATAAGTTCTGAGCAGTGGGCTGACTCTTC...GAGGTTCAGTCTGTCATCAAGGTGGGAGCATGGCAGCATCCATGCAGGCATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTCCTAAATTCAATTCCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCAGCTGCCCCATGCCTaGATGGATGCTGCCATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GPKFNSRQPHEGSQPSVQQLPHA*MDAAML Trigger: GAGCATGGCAGCATCCATGCAGGCATGGGGCAGCTG...CTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGGAATTGAATTTAGGACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGATACCCTTTCCTCAGCTAAGGGAAGAGTCAGCCCACTGCTCAGAACTTATAGTGAGGGACAGGGGTTaGACAGGACTGGCAGAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: MIPFPQLREESAHCSELIVRDRG*TGLAEG Trigger: ACCCTCTGCCAGTCCTGTCCAACCCCTGTCCCTCAC...TATAAGTTCTGAGCAGTGGGCTGACTCTTCCCTTAGCTGAGGAAAGGGTATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGTTGCCTTGGTCCCGGTGTCTGTTCACAGCCATAAAACCCTGGCTAAGACACCACATCCACAGCTCCTaGTTTATTGCCTTGAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: ELPWSRCLFTAIKPWLRHHIHSS*FIALRV Trigger: GACTCTCAAGGCAATAAATCAGGAGCTGTGGATGTG...GTGTCTTAGCCAGGGTTTTATGGCTGTGAACAGACACCGGGACCAAGGCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | AGCAATAGGACAGAAGAGATGGAGACCATGGCCTCCCGGGATCCACACCCTATTCAGCTCCTGATTTATTaGCTTGAGAGTCCAGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SNRTEEMETMASRDPHPIQLLIY*LESPEH Trigger: GTGCTCTGGACTCTCAAGGCAATAAATCAGGAGCTG...AATAGGGTGTGGATCCCGGGAGGCCATGGTCTCCATCTCTTCTGTCCTATTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACAAAAACCAGTGACTTTGTGGAAATATGGCACCGGGGTAGTGAGTTTCCAGCAGCTGCCCCATGCCTaGATGGATGCTGCCATGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KQKPVTLWKYGTGVVSFQQLPHA*MDAAML Trigger: GAGCATGGCAGCATCCATGCAGGCATGGGGCAGCTG...CTGGAAACTCACTACCCCGGTGCCATATTTCCACAAAGTCACTGGTTTTTGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTATATTCATAAGCCGTGGGTACAGATaGGGACAGAGCAGGGACGCA | + |
|
Preference number: 2 (lower is better) Translates to: PDNHMKAHNHLYSYSIFISRGYR*GQSRDA Trigger: TGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCT...TATGAATATACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CAA 90 bp | CCTGTAAGGCAGCCCCAACTAAATGTTGTCCTTGTAAGAGTTGCCTaGGTCCCGGTGTCTGTTCACAGCCATAAAACCCTGGCTAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: PVRQPQLNVVLVRVA*VPVSVHSHKTLAKT Trigger: TGTCTTAGCCAGGGTTTTATGGCTGTGAACAGACACCGGGACCAAGGCAACTCTTACAAGGACAACATTTAGTTGGGGCTGCCTTACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCATGATACCCTTTCCTCAGCTAAGGGAAGAGTCAGCCCACTGCTCAGAACTTTTAAAAACTCCCACCTaGAATACACAGGCCAGGGGG | + |
|
Preference number: 2 (lower is better) Translates to: LMIPFPQLREESAHCSELLKTPT*NTQARG Trigger: CCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAA...AAGTTCTGAGCAGTGGGCTGACTCTTCCCTTAGCTGAGGAAAGGGTATCATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTATAAGACAGCCAGCACATCCACACTGACACATTGTCACTGTTTAAATACGATGGAGGCACGCCACTaGAGCAGCAGTAGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: CYKTASTSTLTHCHCLNTMEARH*SSSSSS Trigger: GCTGCTGCTACTGCTGCTGCAGTGGCGTGCCTCCAT...CGTATTTAAACAGTGACAATGTGTCAGTGTGGATGTGCTGGCTGTCTTATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAATATGGCACCGGGGTAGTGAGTTTCCAGCCCACACAAGGTCACCATTACGAAGAGTCAGCCCACTaGTCAGAACTTATAAGCAGG | + |
|
Preference number: 2 (lower is better) Translates to: WKYGTGVVSFQPTQGHHYEESAH*SELISR Trigger: CCTGCTTATAAGTTCTGAGCAGTGGGCTGACTCTTC...GTAATGGTGACCTTGTGTGGGCTGGAAACTCACTACCCCGGTGCCATATTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTATATTCATAGCTACAGCTGCCCCATaGCTGCATGGATGCTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: PDNHMKAHNHLYSYSIFIATAAP*LHGCCH Trigger: ATGGCAGCATCCATGCAGGCATGGGGCAGCTGTAGC...TATGAATATACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACAAAAACCAGTGACTTTGTGGAAATATGGCACCGGGGTAGTGAGTTTCCAGAAGAGATGGAGACCATaGCCTCCCGGGATCCACACC | + |
|
Preference number: 2 (lower is better) Translates to: KQKPVTLWKYGTGVVSFQKRWRP*PPGIHT Trigger: GGTGTGGATCCCGGGAGGCCATGGTCTCCATCTCTT...CTGGAAACTCACTACCCCGGTGCCATATTTCCACAAAGTCACTGGTTTTTGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGATACCCTTTCCTCAGCTAAGGGAAGAGTCAGCCCACTGCTCAGAACTTATAATAGGACAGAAGAGATaGAGACCATGGCCTCCCGGG | + |
|
Preference number: 2 (lower is better) Translates to: MIPFPQLREESAHCSELIIGQKR*RPWPPG Trigger: CCCGGGAGGCCATGGTCTCCATCTCTTCTGTCCTAT...TATAAGTTCTGAGCAGTGGGCTGACTCTTCCCTTAGCTGAGGAAAGGGTATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTCAATTCCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTCCTGGATCTCTGTTCTaGGCACAGAGGGGACTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: NSIPDNHMKAHNHLYSYSPGSLF*AQRGLG Trigger: ACCCAGTCCCCTCTGTGCCCAGAACAGAGATCCAGG...ACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGGAATTGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTATATTCATCCTGGATCTCTGTTCTaGGCACAGAGGGGACTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SRQPHEGSQPSVQLQYIHPGSLF*AQRGLG Trigger: ACCCAGTCCCCTCTGTGCCCAGAACAGAGATCCAGG...ATGAATATACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGAAATATGGCACCGGGGTAGTGAGTTTCCAGCCCACACAAGGTCACCATTACCAGTCCAAGCTGTGCTaGTTTTTGCGTCAAGAACTT | + |
|
Preference number: 2 (lower is better) Translates to: WKYGTGVVSFQPTQGHHYQSKLC*FLRQEL Trigger: AAGTTCTTGACGCAAAAATCAGCACAGCTTGGACTG...GTAATGGTGACCTTGTGTGGGCTGGAAACTCACTACCCCGGTGCCATATTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACAAAAACCAGTGACTTTGTGGAAATATGGCACCGGGGTAGTGAGTTTCCAGGACAGACTGAACCTCTaGACCTGTAAGGCAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KQKPVTLWKYGTGVVSFQDRLNL*TCKAAP Trigger: TGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCTGTC...CTGGAAACTCACTACCCCGGTGCCATATTTCCACAAAGTCACTGGTTTTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCATGATACCCTTTCCTCAGCTAAGGGAAGAGTCAGCCCACTGCTCAGAACTTCAGCTCCTGATTTATTaGCTTGAGAGTCCAGAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LMIPFPQLREESAHCSELQLLIY*LESPEH Trigger: GTGCTCTGGACTCTCAAGGCAATAAATCAGGAGCTG...AAGTTCTGAGCAGTGGGCTGACTCTTCCCTTAGCTGAGGAAAGGGTATCATGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCTAAATTCAATTCCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCCTGATTTATTGCCTTaGGAGTCCAGAGCACCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: GPKFNSRQPHEGSQPSVQPDLLP*ESRAPG Trigger: ACCAGGTGCTCTGGACTCTCAAGGCAATAAATCAGG...CTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGGAATTGAATTTAGGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGATACCCTTTCCTCAGCTAAGGGAAGAGTCAGCCCACTGCTCAGAACTTATAACACTCAGATCTACCTaGAACCCACACCTCTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: MIPFPQLREESAHCSELITLRST*NPHLWL Trigger: CAACCAGAGGTGTGGGTTGCAGGTAGATCTGAGTGT...TATAAGTTCTGAGCAGTGGGCTGACTCTTCCCTTAGCTGAGGAAAGGGTATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTATATTCATTCAGAAAGACAGCCGTaGGTACAGATGGGGACAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SRQPHEGSQPSVQLQYIHSERQP*VQMGTE Trigger: CTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGA...ATGAATATACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR TCA 90 bp | AAACAAAAACCAGTGACTTTGTGGAAATATGGCACCGGGGTAGTGAGTTTCCAGCACATCCACAGCTCCTaGTTTATTGCCTTGAGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: KQKPVTLWKYGTGVVSFQHIHSS*FIALRV Trigger: GACTCTCAAGGCAATAAATCAGGAGCTGTGGATGTG...CTGGAAACTCACTACCCCGGTGCCATATTTCCACAAAGTCACTGGTTTTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR-3UTR CCA 90 bp | AATTCAATTCCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTACAGCCATAAAACCCTaGCTAAGACACACATATAGC | + |
|
Preference number: 2 (lower is better) Translates to: NSIPDNHMKAHNHLYSYSTAIKP*LRHTYS Trigger: GCTATATGTGTGTCTTAGCCAGGGTTTTATGGCTGT...ACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGGAATTGAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 72 bp | GCAGGTACCAGTGAGAGGCGCCCTGGATCTCTGTTCTaGGCACAGAGGGGACTGGGTCTGCAAAGGCCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AGTSERRPGSLF*AQRGLGLQRPE Trigger: CTCAGGCCTTTGCAGACCCAGTCCCCTCTGTGCCCAGAACAGAGATCCAGGGCGCCTCTCACTGGTACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 72 bp | CAGGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATaGGGACAGAGCAGGGACGCACATAGCCGTTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: QGQLQKDSRGYR*GQSRDAHSRWT Trigger: AGTCCAACGGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| 3UTR GCA 72 bp | AGACCATGGCCTCCCGGGATCCACACCCTATTCCCCTaGTCTATAACACTCTTCACACACATCCACAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: RPWPPGIHTLFP*SITLFTHIHSS Trigger: GGAGCTGTGGATGTGTGTGAAGAGTGTTATAGAGCAGGGGAATAGGGTGTGGATCCCGGGAGGCCATGGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 72 bp | ATCTTTGGGCCGAAGCTAGCAAGGACTGAGAGAGATTaGCGAACCGGAGTGAGCGGAGTTGACCAGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: IFGPKLARTERD*RTGVSGVDQSK Trigger: CTTGCTCTGGTCAACTCCGCTCACTCCGGTTCGCCAATCTCTCTCAGTCCTTGCTAGCTTCGGCCCAAAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 72 bp | CCTTGGTCCCGGTGTCTGTTCACAGCCATAAAACCCTaGCTAAGACACACATATAGCCAGCCCTGTCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PWSRCLFTAIKP*LRHTYSQPCPS Trigger: TGAGGGACAGGGCTGGCTATATGTGTGTCTTAGCCAGGGTTTTATGGCTGTGAACAGACACCGGGACCAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR TCA 72 bp | GTTCTGGGCACAGAGGGGACTGGGTCTGCAAAGGCCTaGGGATCACGTCCTAAGTATGTCAGTGCTATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VLGTEGTGSAKA*GSRPKYVSAIR Trigger: TCTTATAGCACTGACATACTTAGGACGTGATCCTCAGGCCTTTGCAGACCCAGTCCCCTCTGTGCCCAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR TCA 72 bp | AGCTTGGGGCTGGTCAGATGGCTCTTCCGAAAGTCCTaGGTTCAAATCTCAGCAACCACATGGTGGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SLGLVRWLFRKS*VQISATTWWLT Trigger: TGTGAGCCACCATGTGGTTGCTGAGATTTGAACTCAGGACTTTCGGAAGAGCCATCTGACCAGCCCCAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR TCA 72 bp | CTGCCATGCTCCCACCTTGATGACAGACTGAACCTCTaGACCTGTAAGGCAGCCCCAACTAAATGTTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LPCSHLDDRLNL*TCKAAPTKCCP Trigger: AGGACAACATTTAGTTGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCTGTCATCAAGGTGGGAGCATGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR TCA 72 bp | CATGGATGCTGCCATGCTCCCACCTTGATGACAGACTaGACCTCTGAACCTGTAAGGCAGCCCCAACTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HGCCHAPTLMTD*TSEPVRQPQLN Trigger: ATTTAGTTGGGGCTGCCTTACAGGTTCAGAGGTTCAGTCTGTCATCAAGGTGGGAGCATGGCAGCATCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CCA 72 bp | ACCACATGGTGGCTCACAACCACCGGTAATGAGATCTaGCGTCCTCTTCTGGTATGTCTGAAGACAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: TTWWLTTTGNEI*RPLLVCLKTAT Trigger: TGTTGCTGTCTTCAGACATACCAGAAGAGGACGCCAGATCTCATTACCGGTGGTTGTGAGCCACCATGTGGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR GCA 72 bp | AACACTCTTCACACACATCCACAGCTCCTGATTTATTaGCTTGAGAGTCCAGAGCACCTGGTAACAAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: NTLHTHPQLLIY*LESPEHLVTKV Trigger: CACCTTTGTTACCAGGTGCTCTGGACTCTCAAGGCAATAAATCAGGAGCTGTGGATGTGTGTGAAGAGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGGGTCCAGGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGGCCCGCCACACAGTaGACAGCTACGCAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GRGSRDSFRKTAVGTDGDRPATQ*TATQLP Trigger: GGGAAGCTGCGTAGCTGTGCACTGTGTGGCGGGCCT...GTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCCTGGACCCTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGGGTTGGACAGGACTGGCAGAGGGTCCAGGGACAGCTTCAGAAAGACAGAGGCCCGCCACACAGTaGACAGCTACGCAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DRGWTGLAEGPGTASERQRPATQ*TATQLP Trigger: GGGAAGCTGCGTAGCTGTGCACTGTGTGGCGGGCCT...CTGTCTTTCTGAAGCTGTCCCTGGACCCTCTGCCAGTCCTGTCCAACCCCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGTCATCCCGCTCTCGATaGGGGCGAGAGCCACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGLKTPTCNTQARGKAWSSRSR*GREPRA Trigger: TGCTCGTGGCTCTCGCCCTCATCGAGAGCGGGATGA...CCAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCACTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR TCA 90 bp | GGTACAGATGGGGACAGAGCAGGGACGCACATAGCCGTTGGACTCCTTAGACACTCATCCCGCTCTCGATaGGGGCGAGAGCCACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTDGDRAGTHIAVGLLRHSSRSR*GREPRA Trigger: TGCTCGTGGCTCTCGCCCTCATCGAGAGCGGGATGA...GTGTCTAAGGAGTCCAACGGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | GGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCAGTCCTCTACCACTTTaGCAGGAGGGGGCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTASERQPWVQMGTEQGRSPLPL*QEGALH Trigger: ATGGAGCGCCCCCTCCTGGCAAAGTGGTAGAGGACT...GCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCACATATCATCCCGCTCTCGATaGGGGCGAGAGCCACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SFRKTAVGTDGDRAGTHISSRSR*GREPRA Trigger: TGCTCGTGGCTCTCGCCCTCATCGAGAGCGGGATGA...TATGTGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR TCA 90 bp | CCCAGTGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGGGCGCTTCTGTCGGATaGACTGGATGGCGTCCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGLKTPTCNTQARGKAWGASVG*TGWRPR Trigger: ACGAGGACGCCATCCAGTTCATCCGACAGAAGCGCC...CCAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCACTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | TGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGGCAGTAGGCCCGCCACACAGTaGACAGCTACGCAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WFKNSHLQYTGQGEGLGSRPATQ*TATQLP Trigger: GGGAAGCTGCGTAGCTGTGCACTGTGTGGCGGGCCT...ACTGCCCAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | AGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCACATAGCCGTTAGTCCTCTACCACTTTaGCAGGAGGGGGCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RKTAVGTDGDRAGTHIAVSPLPL*QEGALH Trigger: ATGGAGCGCCCCCTCCTGGCAAAGTGGTAGAGGACT...AACGGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCACATAGCCAGTCCTCTACCACTTTaGCAGGAGGGGGCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRKTAVGTDGDRAGTHIASPLPL*QEGALH Trigger: ATGGAGCGCCCCCTCCTGGCAAAGTGGTAGAGGACT...GGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGATGAGGTCCTAGGCAGACCCATGTCACCAAAGGCCATCTACACTCAGAGGCCCGCCACACAGTaGACAGCTACGCAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQDEVLGRPMSPKAIYTQRPATQ*TATQLP Trigger: GGGAAGCTGCGTAGCTGTGCACTGTGTGGCGGGCCT...CTGAGTGTAGATGGCCTTTGGTGACATGGGTCTGCCTAGGACCTCATCCTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTTGGACAGGACTGGCAGAGGGTCCAGGGACAGCTTCAGAAAGACAGCCGTCAGCATCTGGTCTTGTaGGTGTGTGGGTCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVGQDWQRVQGQLQKDSRQHLVL*VCGSLN Trigger: GTTCAAAGACCCACACACGCACAAGACCAGATGCTG...ACGGCTGTCTTTCTGAAGCTGTCCCTGGACCCTCTGCCAGTCCTGTCCAACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CCA 90 bp | GGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCGGTCTTGTGCGTGTGTaGGTCTTTGAACCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTASERQPWVQMGTEQGRGLVRV*VFEPQS Trigger: AGACTGAGGTTCAAAGACCCACACACGCACAAGACC...GCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGATGAGGTCCTAGGCAGACCCATGTCACCAAAGGCCATCTACACTCAGAGTCCTCTACCACTTTaGCAGGAGGGGGCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQDEVLGRPMSPKAIYTQSPLPL*QEGALH Trigger: ATGGAGCGCCCCCTCCTGGCAAAGTGGTAGAGGACT...CTGAGTGTAGATGGCCTTTGGTGACATGGGTCTGCCTAGGACCTCATCCTGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCACATAGCCGTCAGCATCTGGTCTTGTaGGTGTGTGGGTCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QKDSRGYRWGQSRDAHSRQHLVL*VCGSLN Trigger: GTTCAAAGACCCACACACGCACAAGACCAGATGCTG...ACGGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR GCA 90 bp | GACAGGGGTTGGACAGGACTGGCAGAGGGTCCAGGGACAGCTTCAGAAAGACAGCAGCATCTGGTCTTGTaGGTGTGTGGGTCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DRGWTGLAEGPGTASERQQHLVL*VCGSLN Trigger: GTTCAAAGACCCACACACGCACAAGACCAGATGCTG...CTGTCTTTCTGAAGCTGTCCCTGGACCCTCTGCCAGTCCTGTCCAACCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGGTCATTGTAGAACTTaGCCTTCAGCAGGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AQWFKNSHLQYTGQGEGLGHCRT*PSAGSA Trigger: GGCTGAGCCTGCTGAAGGCCAAGTTCTACAATGACC...CAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCACTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGATGGGGACAGAGCAGGGACGCACATAGCCGTTGGACTCCTTAGACACGGTCATTGTAGAACTTaGCCTTCAGCAGGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTDGDRAGTHIAVGLLRHGHCRT*PSAGSA Trigger: GGCTGAGCCTGCTGAAGGCCAAGTTCTACAATGACC...GTGTCTAAGGAGTCCAACGGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CCA 90 bp | GACAGGGGTTGGACAGGACTGGCAGAGGGTCCAGGGACAGCTTCAGAAAGACAGGGTCTTGTGCGTGTGTaGGTCTTTGAACCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DRGWTGLAEGPGTASERQGLVRV*VFEPQS Trigger: AGACTGAGGTTCAAAGACCCACACACGCACAAGACC...CTGTCTTTCTGAAGCTGTCCCTGGACCCTCTGCCAGTCCTGTCCAACCCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCACATAGCCTTCTGTCGGATGAACTaGATGGCGTCCTCGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: FRKTAVGTDGDRAGTHIAFCRMN*MASSYF Trigger: GAAGTACGAGGACGCCATCCAGTTCATCCGACAGAA...GGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CCA 90 bp | CCCAGTGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGTTCTGTCGGATGAACTaGATGGCGTCCTCGTACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSGLKTPTCNTQARGKAWFCRMN*MASSYF Trigger: GAAGTACGAGGACGCCATCCAGTTCATCCGACAGAA...CCAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCACTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CCA 90 bp | GGTACAGATGGGGACAGAGCAGGGACGCACATAGCCGTTGGACTCCTTAGACACGGTCTTGTGCGTGTGTaGGTCTTTGAACCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDGDRAGTHIAVGLLRHGLVRV*VFEPQS Trigger: AGACTGAGGTTCAAAGACCCACACACGCACAAGACC...GTGTCTAAGGAGTCCAACGGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| 3UTR CAA 72 bp | TCTACACTCAGATCTACCTGCAACCCACACCTCTGGTaGCATGAAGGTCGGGGGTGGAGGCCACTGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: STLRSTCNPHLW*HEGRGWRPLKV Trigger: AACTTTCAGTGGCCTCCACCCCCGACCTTCATGCAACCAGAGGTGTGGGTTGCAGGTAGATCTGAGTGTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR TCA 90 bp | GGTACAGATGGGGACAGAGCAGGGACGCACATAGCCGTTGGACTCCTTAGACACTACTTCTTCAGGTCCTaGAGGTTTCCAGCCAATGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDGDRAGTHIAVGLLRHYFFRS*RFPANA Trigger: AGCATTGGCTGGAAACCTTCAGGACCTGAAGAAGTA...GTGTCTAAGGAGTCCAACGGCTATGTGCGTCCCTGCTCTGTCCCCATCTGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167582.8 |
||
| CDS-3UTR CCA 90 bp | TGGTTTAAAAACTCCCACCTGCAATACACAGGCCAGGGGGAAGGCCTGGGCAGTGGTCTTGTGCGTGTGTaGGTCTTTGAACCTCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WFKNSHLQYTGQGEGLGSGLVRV*VFEPQS Trigger: AGACTGAGGTTCAAAGACCCACACACGCACAAGACC...ACTGCCCAGGCCTTCCCCCTGGCCTGTGTATTGCAGGTGGGAGTTTTTAAACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR TCA 90 bp | AATTCAATTCCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTTCATCCCGCTCTCGATaGGGGCGAGAGCCACGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSIPDNHMKAHNHLYSYSSSRSR*GREPRA Trigger: TGCTCGTGGCTCTCGCCCTCATCGAGAGCGGGATGA...ACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGGAATTGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | AAACAAAAACCAGTGACTTTGTGGAAATATGGCACCGGGGTAGTGAGTTTCCAGAGGCCCGCCACACAGTaGACAGCTACGCAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQKPVTLWKYGTGVVSFQRPATQ*TATQLP Trigger: GGGAAGCTGCGTAGCTGTGCACTGTGTGGCGGGCCT...CTGGAAACTCACTACCCCGGTGCCATATTTCCACAAAGTCACTGGTTTTTGTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | AAGCAGGATGAGGTCCTAGGCAGACCCATGTCACCAAAGGCCATCTACACTCAGCAGCATCTGGTCTTGTaGGTGTGTGGGTCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQDEVLGRPMSPKAIYTQQHLVL*VCGSLN Trigger: GTTCAAAGACCCACACACGCACAAGACCAGATGCTG...CTGAGTGTAGATGGCCTTTGGTGACATGGGTCTGCCTAGGACCTCATCCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | AGCAATAGGACAGAAGAGATGGAGACCATGGCCTCCCGGGATCCACACCCTATTCAGCATCTGGTCTTGTaGGTGTGTGGGTCTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNRTEEMETMASRDPHPIQHLVL*VCGSLN Trigger: GTTCAAAGACCCACACACGCACAAGACCAGATGCTG...AATAGGGTGTGGATCCCGGGAGGCCATGGTCTCCATCTCTTCTGTCCTATTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCACATAAGGTTTCCAGCCAATaGTTCAGACACTTGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: QLQKDSRGYRWGQSRDAHKVSSQ*FRHLQM Trigger: CATCTGCAAGTGTCTGAAGCATTGGCTGGAAACCTT...ATGTGCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167582.8 |
||
| CDS-3UTR CCA 90 bp | CTCATGATACCCTTTCCTCAGCTAAGGGAAGAGTCAGCCCACTGCTCAGAACTTGGTCATTGTAGAACTTaGCCTTCAGCAGGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LMIPFPQLREESAHCSELGHCRT*PSAGSA Trigger: GGCTGAGCCTGCTGAAGGCCAAGTTCTACAATGACC...AAGTTCTGAGCAGTGGGCTGACTCTTCCCTTAGCTGAGGAAAGGGTATCATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR GCA 90 bp | CCCGACAACCACATGAAGGCTCACAACCATCTGTACAGCTACAGTATATTCATAAGTCCTCTACCACTTTaGCAGGAGGGGGCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PDNHMKAHNHLYSYSIFISPLPL*QEGALH Trigger: ATGGAGCGCCCCCTCCTGGCAAAGTGGTAGAGGACT...TATGAATATACTGTAGCTGTACAGATGGTTGTGAGCCTTCATGTGGTTGTCGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| 3UTR CAA 72 bp | CAGCCCCAACTAAATGTTGTCCTTGTAAGAGTTGCCTaGGTCCCGGTGTCTGTTCACAGCCATAAAACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: QPQLNVVLVRVA*VPVSVHSHKTL Trigger: CAGGGTTTTATGGCTGTGAACAGACACCGGGACCAAGGCAACTCTTACAAGGACAACATTTAGTTGGGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000053232.8 ENSMUST00000165541.8 ENSMUST00000167582.8 |
||
| CDS-3UTR CAA 90 bp | GGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGACGCGTGCTGAGGGTGGCATaGCTGGGGTTGTGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GTASERQPWVQMGTEQGRVLRVA*LGLWVM Trigger: CATCACCCACAACCCCAGCAATGCCACCCTCAGCAC...GCGTCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CAA 90 bp | TCCAGGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGGTGAGCTGCTTGCTGTaGATGGCCCCACGGCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRDSFRKTAVGTDGDRAGVSCLL*MAPRRF Trigger: GAAGCGCCGTGGGGCCATCAACAGCAAGCAGCTCAC...CCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CAA 90 bp | GACAGGACTGGCAGAGGGTCCAGGGACAGCTTCAGAAAGACAGCCGTGGGTACAGTGCTGAGGGTGGCATaGCTGGGGTTGTGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: DRTGRGSRDSFRKTAVGTVLRVA*LGLWVM Trigger: CATCACCCACAACCCCAGCAATGCCACCCTCAGCAC...TGTACCCACGGCTGTCTTTCTGAAGCTGTCCCTGGACCCTCTGCCAGTCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGGAGTGCTGAGGGTGGCATaGCTGGGGTTGTGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGTASERQPWVQMGTEQGVLRVA*LGLWVM Trigger: CATCACCCACAACCCCAGCAATGCCACCCTCAGCAC...TCCCTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000230177.2 |
||
| CDS-3UTR CAA 90 bp | GGTCCAGGGACAGCTTCAGAAAGACAGCCGTGGGTACAGATGGGGACAGAGCAGGTGCTGAGGGTGGCATaGCTGGGGTTGTGGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GPGTASERQPWVQMGTEQVLRVA*LGLWVM Trigger: CATCACCCACAACCCCAGCAATGCCACCCTCAGCAC...CTGCTCTGTCCCCATCTGTACCCACGGCTGTCTTTCTGAAGCTGTCCCTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000230177.2 |
||
| CDS CCA 90 bp | CCACACAGTGCACAGCTACGCAGCTTCCCGGGTCATTGTAGAACTTaGCCTTCAGCAGGCTCAGCCAGTCCTCTACCACTTTGCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PHSAQLRSFPGHCRT*PSAGSASPLPLCQE Trigger: CTCCTGGCAAAGTGGTAGAGGACTGGCTGAGCCTGCTGAAGGCCAAGTTCTACAATGACCCGGGAAGCTGCGTAGCTGTGCACTGTGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS TCA 90 bp | TCACACACGCGCACCACAGTGGTAGCCCCGTACTTCTTCAGGTCCTaGAGGTTTCCAGCCAATGCTTCAGACACTTGCAGATGCCGGACC | + |
|
Preference number: 5 (lower is better) Translates to: SHTRTTVVAPYFFRS*RFPANASDTCRCRT Trigger: GGTCCGGCATCTGCAAGTGTCTGAAGCATTGGCTGGAAACCTTCAGGACCTGAAGAAGTACGGGGCTACCACTGTGGTGCGCGTGTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167582.8 |
||
| CDS CCA 72 bp | CTGTTGATGGCCCCACGGCGCTTCTGTCGGATGAACTaGATGGCGTCCTCGTACTTCATCCCGCTCTCGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLMAPRRFCRMN*MASSYFIPLSM Trigger: CATCGAGAGCGGGATGAAGTACGAGGACGCCATCCAGTTCATCCGACAGAAGCGCCGTGGGGCCATCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS CCA 72 bp | GCACAGCTACGCAGCTTCCCGGGTCATTGTAGAACTTaGCCTTCAGCAGGCTCAGCCAGTCCTCTACCACTT | + |
|
Preference number: 6 (lower is better) Translates to: AQLRSFPGHCRT*PSAGSASPLPL Trigger: AAGTGGTAGAGGACTGGCTGAGCCTGCTGAAGGCCAAGTTCTACAATGACCCGGGAAGCTGCGTAGCTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000053232.8 ENSMUST00000163582.9 ENSMUST00000165541.8 ENSMUST00000167582.8 ENSMUST00000230177.2 |
||
| CDS TCA 72 bp | CGCACCACAGTGGTAGCCCCGTACTTCTTCAGGTCCTaGAGGTTTCCAGCCAATGCTTCAGACACTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RTTVVAPYFFRS*RFPANASDTCR Trigger: TCTGCAAGTGTCTGAAGCATTGGCTGGAAACCTTCAGGACCTGAAGAAGTACGGGGCTACCACTGTGGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167582.8 |
||