Pregenerated sensors for PTN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029838Ensembl transcript IDs: ENSMUST00000101534.5, ENSMUST00000201321.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCTTGCTTTACCATCTCCAGCATGAATGCAGAGTCCAGCATGAATaGAGAGTCTGGCATTCTGGGAACAAGTACTCTCTCTCTCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: VLLYHLQHECRVQHE*RVWHSGNKYSLSLS Trigger: AGAGAGAGAGAGAGAGTACTTGTTCCCAGAATGCCAGACTCTGCATTCATGCTGGACTCTGCATTCATGCTGGAGATGGTAAAGCAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CCA 90 bp | AATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATaGGCACCATCTCTGTCAGAGGATTTCATACTGAAATATGTGAGC | + |
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Preference number: 1 (lower is better) Translates to: NLHFLSYTATGMVCV*APSLSEDFILKYVS Trigger: GCTCACATATTTCAGTATGAAATCCTCTGACAGAGATGGTGCCCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR TCA 90 bp | CTGAGATTAGAGGTGGCCCTTTCCATTGCCAACTCCATCAAAAGATaGAAAGCTTGGCATCTAGAAAGAAACCTCTCTTGTCATCGGCAC | + |
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Preference number: 1 (lower is better) Translates to: LRLEVALSIANSIKR*KAWHLERNLSCHRH Trigger: GTGCCGATGACAAGAGAGGTTTCTTTCTAGATGCCAAGCTTTTCATCTTTTGATGGAGTTGGCAATGGAAAGGGCCACCTCTAATCTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CCA 90 bp | CCCATGGAAAATTCTAGAACAGAGTCCGGGCAGAGAATCACTGTGTaGGAGCAAAGAGAACTCCTTACATTCTCTCCCTTTCAATTCTCT | + |
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Preference number: 1 (lower is better) Translates to: PMENSRTESGQRITV*EQRELLTFSPFQFS Trigger: AGAGAATTGAAAGGGAGAGAATGTAAGGAGTTCTCTTTGCTCCCACACAGTGATTCTCTGCCCGGACTCTGTTCTAGAATTTTCCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR GCA 90 bp | CTGCCATATTTTGTGGAGGTTTTTCCTTGTATTCTTGTTCATGTATaGAGAGAACGTCCACTTAAGCTCAGAGACAGCCTCCTGGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: LPYFVEVFPCILVHV*RERPLKLRDSLLAV Trigger: TACTGCCAGGAGGCTGTCTCTGAGCTTAAGTGGACGTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR TCA 90 bp | ATCATTCATCCTTATAGAACCAATGGTGATCTGGTTGGGAGGGTCTaGTCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAA | + |
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Preference number: 1 (lower is better) Translates to: IIHPYRTNGDLVGRV*SKSGQWEFSMFPWK Trigger: TTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGATCAGACCCTCCCAACCAGATCACCATTGGTTCTATAAGGATGAATGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR TCA 90 bp | CTGTTGAATAAAAAGCCTACAGTAGGTATAAATGGAATAATTAACTaGTCCTGTTTGCTGATGCCCTTTTCCTGGTCCACAGACGGTGGC | + |
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Preference number: 1 (lower is better) Translates to: LLNKKPTVGINGIIN*SCLLMPFSWSTDGG Trigger: GCCACCGTCTGTGGACCAGGAAAAGGGCATCAGCAAACAGGATCAGTTAATTATTCCATTTATACCTACTGTAGGCTTTTTATTCAACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| 3UTR CCA 90 bp | GACGTTAGTTACCCAAGCAGCAGCCATCTTAACTGCCATATTTTGTaGAGGTTTTTCCTTGTATTCTTGTTCATGTATGCAGAGAACGTC | + |
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Preference number: 1 (lower is better) Translates to: DVSYPSSSHLNCHIL*RFFLVFLFMYAENV Trigger: GACGTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGCTGCTGCTTGGGTAACTAACGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR GCA 90 bp | TTTAGGATAACAGACGTTAGTTACCCAAGCAGCAGCCATCTTAACTaGCATATTTTGTGGAGGTTTTTCCTTGTATTCTTGTTCATGTAT | + |
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Preference number: 1 (lower is better) Translates to: FRITDVSYPSSSHLN*HILWRFFLVFLFMY Trigger: ATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGCTGCTGCTTGGGTAACTAACGTCTGTTATCCTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CCA 90 bp | GAGATACGGGTCAGGTTAGACTTGACAATAGAGATTTGGAAGACATaGAATTCAGTACTTCATACTCATGAAATGAAAGAATTTACCACC | + |
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Preference number: 1 (lower is better) Translates to: EIRVRLDLTIEIWKT*NSVLHTHEMKEFTT Trigger: GGTGGTAAATTCTTTCATTTCATGAGTATGAAGTACTGAATTCCATGTCTTCCAAATCTCTATTGTCAAGTCTAACCTGACCCGTATCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR TCA 90 bp | CACCAGCATATATCTGAATTTCTCCTTACAACGAATCTGACTGGATaGATTTTCCAGTTTATTTTAAGAGTCAAGTACAAGGAGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: HQHISEFLLTTNLTG*IFQFILRVKYKERS Trigger: TGACCTCTCCTTGTACTTGACTCTTAAAATAAACTGGAAAATTCATCCAGTCAGATTCGTTGTAAGGAGAAATTCAGATATATGCTGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATCAATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATGGGTTGGTAAAGCTCCCTaGGAAGGTAGCCAAAACCTG | + |
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Preference number: 2 (lower is better) Translates to: FINLHFLSYTATGMVCVWVGKAP*EGSQNL Trigger: CAGGTTTTGGCTACCTTCCCAGGGAGCTTTACCAAC...CCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CAA 90 bp | AGAGGTGGCCCTTTCCATTGCCAACTCCATCAAAAGATGAAAAGCTaGGCATCTAGAAAGAAACCTCTCTTGTCATCGGCACAAACCACC | + |
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Preference number: 2 (lower is better) Translates to: RGGPFHCQLHQKMKS*ASRKKPLLSSAQTT Trigger: GGTGGTTTGTGCCGATGACAAGAGAGGTTTCTTTCTAGATGCCAAGCTTTTCATCTTTTGATGGAGTTGGCAATGGAAAGGGCCACCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR GCA 90 bp | CACTGTGTGGGAGCAAAGAGAACTCCTTACATTCTCTCCCTTTCAATTCTCTCCTCTGAAAGTGGCTCCTaGTTTCTAACTGGTTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: HCVGAKRTPYILSLSILSSESGS*FLTGCG Trigger: GCCACAACCAGTTAGAAAGCAGGAGCCACTTTCAGA...GGAGAGAATTGAAAGGGAGAGAATGTAAGGAGTTCTCTTTGCTCCCACACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGCTTTACCATCTCCAGCATGAATGCAGAGTCCAGCATGAATGCAGAGTCTCTTTGGGTTATTCCTaGGCTTGTCAGTCTACTGAA | + |
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Preference number: 2 (lower is better) Translates to: VLLYHLQHECRVQHECRVSLGYS*ACQSTE Trigger: TTCAGTAGACTGACAAGCTCAGGAATAACCCAAAGA...GACTCTGCATTCATGCTGGACTCTGCATTCATGCTGGAGATGGTAAAGCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATTGGCCTGATTTCTTGTaGGACTTCTCTCTGTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PYILSLSILSTLVPHWFNWPDFL*DFSLWL Trigger: CAGCCACAGAGAGAAGTCTCACAAGAAATCAGGCCA...ATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | TATCAATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATGGGCCCACCAGCATATATCTaGATTTCTCCTTACAACGAA | + |
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Preference number: 2 (lower is better) Translates to: YQSAFPLLHCHRDGVCMGPPAYI*ISPYNE Trigger: TTCGTTGTAAGGAGAAATTCAGATATATGCTGGTGG...GCCCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | GGGTCTGATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCGAACTCTTCCATTTCTaGAAGTGGCTCCTGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: GSDQSLGSGNFLCSHGKFELFHF*KWLLLS Trigger: AGAAAGCAGGAGCCACTTTCAGAAATGGAAGAGTTC...GAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGATCAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACAGAGTCCGGGTACCACCTCTTGACATaGAACCACATCTATGTTTGT | + |
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Preference number: 2 (lower is better) Translates to: WAVGIFYVPMENSRTESGYHLLT*NHIYVC Trigger: ACAAACATAGATGTGGTTTCATGTCAAGAGGTGGTA...CCCGGACTCTGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR GCA 90 bp | TACAAGGAGAGGTCAAGGGGGTATTTTAATGTGGATTTCATTGAAGCTTATGCCCATCTCCAGCATGAATaGAGAGTCCAGCATGAATGC | + |
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Preference number: 2 (lower is better) Translates to: YKERSRGYFNVDFIEAYAHLQHE*RVQHEC Trigger: GCATTCATGCTGGACTCTGCATTCATGCTGGAGATG...GGCATAAGCTTCAATGAAATCCACATTAAAATACCCCCTTGACCTCTCCTTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATCAATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATGGTTCTCTCCACATTGGTaGCACATTGGTTCAATTGAT | + |
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Preference number: 2 (lower is better) Translates to: FINLHFLSYTATGMVCVWFSPHW*HIGSID Trigger: ATCAATTGAACCAATGTGGCACCAATGTGGAGAGAA...CCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CCA 90 bp | TATCAATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATGGGCAACTGCCATATTTTGTaGAGGTTTTTCCTTGTATTC | + |
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Preference number: 2 (lower is better) Translates to: YQSAFPLLHCHRDGVCMGNCHIL*RFFLVF Trigger: GAATACAAGGAAAAACCTCCACAAAATATGGCAGTT...GCCCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CAA 90 bp | AGCCATCTTAACTGCCATATTTTGTGGAGGTTTTTCCTTGTATTCTaGTTCATGTATGCAGAGAACGTCCACTTAAGCTCAGAGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: SHLNCHILWRFFLVF*FMYAENVHLSSETA Trigger: GGCTGTCTCTGAGCTTAAGTGGACGTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CAA 90 bp | ACCACCAGCCATCCTCAGCTTCTGCGGCAAGTTCTTTTTCTTATTTaGGCTAACCACCAGCATATATCTGAATTTCTCCTTACAACGAAT | + |
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Preference number: 2 (lower is better) Translates to: TTSHPQLLRQVLFLI*ANHQHISEFLLTTN Trigger: ATTCGTTGTAAGGAGAAATTCAGATATATGCTGGTGGTTAGCCAAAATAAGAAAAAGAACTTGCCGCAGAAGCTGAGGATGGCTGGTGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATCAATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATGGAATATAGTCACATTTTaGGATACGGGTCAGGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: FINLHFLSYTATGMVCVWNIVTF*DTGQVR Trigger: TCTAACCTGACCCGTATCTCAAAATGTGACTATATT...CCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACACAGAGTCTGGCATTCTaGGAACAAGTACTCTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: IKVWAVGIFYVPMENSRTQSLAF*EQVLSL Trigger: GAGAGAGAGTACTTGTTCCCAGAATGCCAGACTCTG...TGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CAA 90 bp | ACAGACGTTAGTTACCCAAGCAGCAGCCATCTTAACTGCCATATTTaGTGGAGGTTTTTCCTTGTATTCTTGTTCATGTATGCAGAGAAC | + |
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Preference number: 2 (lower is better) Translates to: TDVSYPSSSHLNCHI*WRFFLVFLFMYAEN Trigger: GTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGCTGCTGCTTGGGTAACTAACGTCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTACTGATCCTGTTTGCTaGTGCCCTTTTCCTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSTDPVC*CPFPGP Trigger: TGGACCAGGAAAAGGGCATCAGCAAACAGGATCAGT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| 3UTR-3UTR CCA 90 bp | TACAAGGAGAGGTCAAGGGGGTATTTTAATGTGGATTTCATTGAAGCTTATGCCCTGAGATCAAAGTGTTaGACTGGCCTGATTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: YKERSRGYFNVDFIEAYALRSKC*TGLISC Trigger: ACAAGAAATCAGGCCAGTCCAACACTTTGATCTCAG...GGCATAAGCTTCAATGAAATCCACATTAAAATACCCCCTTGACCTCTCCTTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CCA 90 bp | ATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACACTCTTCGAGAATCTTTaGGTTATTCCTGAGCTTGTC | + |
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Preference number: 2 (lower is better) Translates to: IKVWAVGIFYVPMENSRTLFENL*VIPELV Trigger: GACAAGCTCAGGAATAACCCAAAGATTCTCGAAGAG...TGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CCA 90 bp | TTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATTGCAAAGAACCACAACATaGGCAGCTAAGATAATAGGT | + |
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Preference number: 2 (lower is better) Translates to: LHSLPFNSLHIGATLVQLQRTTT*AAKIIG Trigger: ACCTATTATCTTAGCTGCCCATGTTGTGGTTCTTTG...CAATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | AAGATAATAGGTATGCATTCCCCCACAATTCTAGAGACTGTAAGTCTGAGATCAGAATTTACCACCTCTTaGCATGAAACCACATCTATG | + |
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Preference number: 2 (lower is better) Translates to: KIIGMHSPTILETVSLRSEFTTS*HETTSM Trigger: CATAGATGTGGTTTCATGTCAAGAGGTGGTAAATTC...TGATCTCAGACTTACAGTCTCTAGAATTGTGGGGGAATGCATACCTATTATCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR GCA 90 bp | ATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACACATCTATGTTTGTCTTaGTTTACCATCTCCAGCATG | + |
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Preference number: 2 (lower is better) Translates to: IKVWAVGIFYVPMENSRTHLCLS*FTISSM Trigger: CATGCTGGAGATGGTAAAGCAAGACAAACATAGATG...TGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATGGGGGTATTTTAATGTaGATTTCATTGAAGCTTATG | + |
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Preference number: 2 (lower is better) Translates to: PYILSLSILSTLVPHWFNGGILM*ISLKLM Trigger: CATAAGCTTCAATGAAATCCACATTAAAATACCCCC...ATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR TCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTAATGGAATAATTAACTaGTCCTGTTTGCTGATGCCC | + |
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Preference number: 2 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSNGIIN*SCLLMP Trigger: GGGCATCAGCAAACAGGATCAGTTAATTATTCCATT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| 3UTR-3UTR CCA 90 bp | AAGATAATAGGTATGCATTCCCCCACAATTCTAGAGACTGTAAGTCTGAGATCAGAGATTTGGAAGACATaGAATTCAGTACTTCATACT | + |
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Preference number: 2 (lower is better) Translates to: KIIGMHSPTILETVSLRSEIWKT*NSVLHT Trigger: AGTATGAAGTACTGAATTCCATGTCTTCCAAATCTC...TGATCTCAGACTTACAGTCTCTAGAATTGTGGGGGAATGCATACCTATTATCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CAA 90 bp | GGATTTGGACCCACTCCTATGACTTCACTTGAACTTAGTTATATCTaGAAAGTCCATACTTATAAATATAGTCACATTTTGAGATACGGG | + |
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Preference number: 2 (lower is better) Translates to: GFGPTPMTSLELSYI*KVHTYKYSHILRYG Trigger: CCCGTATCTCAAAATGTGACTATATTTATAAGTATGGACTTTCAAGATATAACTAAGTTCAAGTGAAGTCATAGGAGTGGGTCCAAATCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CCA 72 bp | GCAGAGAACGTCCACTTAAGCTCAGAGACAGCCTCCTaGCAGTATGCTCAGCCAACGGGCATTGTTCAATTA | + |
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Preference number: 3 (lower is better) Translates to: AENVHLSSETAS*QYAQPTGIVQL Trigger: TAATTGAACAATGCCCGTTGGCTGAGCATACTGCCAGGAGGCTGTCTCTGAGCTTAAGTGGACGTTCTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR GCA 72 bp | CCCCTCTTTTATCAATCTGCATTTCCTCTCCTACACTaGCACAGGGATGGTGTGTGTATGGGCACCATCTCT | + |
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Preference number: 3 (lower is better) Translates to: PLFYQSAFPLLH*HRDGVCMGTIS Trigger: AGAGATGGTGCCCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATAAAAGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR GCA 72 bp | CCCAGCCATCCTGAGATTAGAGGTGGCCCTTTCCATTaGCAACTCCATCAAAAGATGAAAAGCTTGGCATCT | + |
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Preference number: 3 (lower is better) Translates to: PSHPEIRGGPFH*QLHQKMKSLAS Trigger: AGATGCCAAGCTTTTCATCTTTTGATGGAGTTGGCAATGGAAAGGGCCACCTCTAATCTCAGGATGGCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CCA 72 bp | CAGCATGAATGCAGAGTCCAGCATGAATGCAGAGTCTaGCATTCTGGGAACAAGTACTCTCTCTCTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: QHECRVQHECRV*HSGNKYSLSLS Trigger: AGAGAGAGAGAGAGAGTACTTGTTCCCAGAATGCCAGACTCTGCATTCATGCTGGACTCTGCATTCATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CCA 72 bp | TTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATaGGCACCATCTCTGTCAGAGGATTTCATACTGAAA | + |
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Preference number: 3 (lower is better) Translates to: FLSYTATGMVCV*APSLSEDFILK Trigger: TTTCAGTATGAAATCCTCTGACAGAGATGGTGCCCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACAGAGTCCGGGAGAAAGAAACCTCTCTaGTCATCGGCACAAACCACC | + |
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Preference number: 3 (lower is better) Translates to: WAVGIFYVPMENSRTESGRKKPL*SSAQTT Trigger: GGTGGTTTGTGCCGATGACAAGAGAGGTTTCTTTCT...CCCGGACTCTGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACAGAGTCCGGGTCTGAGATCAAAGTGTaGGACTGGCCTGATTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: WAVGIFYVPMENSRTESGSEIKV*DWPDFL Trigger: CAAGAAATCAGGCCAGTCCAACACTTTGATCTCAGA...CCCGGACTCTGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR TCA 72 bp | CCTTATAGAACCAATGGTGATCTGGTTGGGAGGGTCTaGTCAAAGTCTGGGCAGTGGGAATTTTCTATGTTC | + |
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Preference number: 3 (lower is better) Translates to: PYRTNGDLVGRV*SKSGQWEFSMF Trigger: GAACATAGAAAATTCCCACTGCCCAGACTTTGATCAGACCCTCCCAACCAGATCACCATTGGTTCTATAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR GCA 72 bp | CCACCTCTTGACATGAAACCACATCTATGTTTGTCTTaGTTTACCATCTCCAGCATGAATGCAGAGTCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PPLDMKPHLCLS*FTISSMNAESS Trigger: GCTGGACTCTGCATTCATGCTGGAGATGGTAAAGCAAGACAAACATAGATGTGGTTTCATGTCAAGAGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CCA 72 bp | GAATTGTCAAGGGGAGCTACACAAAGAACCACAACATaGGCAGCTAAGATAATAGGTATGCATTCCCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ELSRGATQRTTT*AAKIIGMHSPT Trigger: TGTGGGGGAATGCATACCTATTATCTTAGCTGCCCATGTTGTGGTTCTTTGTGTAGCTCCCCTTGACAATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR CCA 72 bp | AATTCTAGAACAGAGTCCGGGCAGAGAATCACTGTGTaGGAGCAAAGAGAACTCCTTACATTCTCTCCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: NSRTESGQRITV*EQRELLTFSPF Trigger: AAAGGGAGAGAATGTAAGGAGTTCTCTTTGCTCCCACACAGTGATTCTCTGCCCGGACTCTGTTCTAGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR-3UTR CAA 90 bp | TATCAATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATGGGCCTTAACTGCCATATTTaGTGGAGGTTTTTCCTTGTA | + |
|
Preference number: 3 (lower is better) Translates to: YQSAFPLLHCHRDGVCMGLNCHI*WRFFLV Trigger: TACAAGGAAAAACCTCCACAAAATATGGCAGTTAAG...GCCCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR-3UTR CAA 90 bp | GGGTCTGATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCGTAACACTTAGAAAGTaGGTAAAGCTCCCTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSDQSLGSGNFLCSHGKFVTLRK*VKLPGK Trigger: CTTCCCAGGGAGCTTTACCAACTTTCTAAGTGTTAC...GAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGATCAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR TCA 72 bp | GAGGTGGCCCTTTCCATTGCCAACTCCATCAAAAGATaGAAAGCTTGGCATCTAGAAAGAAACCTCTCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVALSIANSIKR*KAWHLERNLSC Trigger: ACAAGAGAGGTTTCTTTCTAGATGCCAAGCTTTTCATCTTTTGATGGAGTTGGCAATGGAAAGGGCCACCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR GCA 72 bp | TTTGTGGAGGTTTTTCCTTGTATTCTTGTTCATGTATaGAGAGAACGTCCACTTAAGCTCAGAGACAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FVEVFPCILVHV*RERPLKLRDSL Trigger: GAGGCTGTCTCTGAGCTTAAGTGGACGTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATTGAGCTTATGCCATGAATaGTCAAGGGGAGCTACACAA | + |
|
Preference number: 3 (lower is better) Translates to: LHSLPFNSLHIGATLVQLSLCHE*SRGATQ Trigger: TTGTGTAGCTCCCCTTGACAATTCATGGCATAAGCT...CAATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACAAGGTGGCCCTTTCCATaGCCAACTCCATCAAAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: IKVWAVGIFYVPMENSRTRWPFP*PTPSKD Trigger: ATCTTTTGATGGAGTTGGCAATGGAAAGGGCCACCT...TGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR GCA 72 bp | ACAGACGTTAGTTACCCAAGCAGCAGCCATCTTAACTaGCATATTTTGTGGAGGTTTTTCCTTGTATTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TDVSYPSSSHLN*HILWRFFLVFL Trigger: CAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGCTGCTGCTTGGGTAACTAACGTCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATCTTGACAATAGAGATTaGGAAGACATGGAATTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: PYILSLSILSTLVPHWFNLDNRD*EDMEFS Trigger: ACTGAATTCCATGTCTTCCAAATCTCTATTGTCAAG...ATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR CCA 72 bp | TACCCAAGCAGCAGCCATCTTAACTGCCATATTTTGTaGAGGTTTTTCCTTGTATTCTTGTTCATGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: YPSSSHLNCHIL*RFFLVFLFMYA Trigger: TGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGCTGCTGCTTGGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATTGCAAAAGATGAAAAGCTaGGCATCTAGAAAGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: LHSLPFNSLHIGATLVQLQKMKS*ASRKKP Trigger: AGGTTTCTTTCTAGATGCCAAGCTTTTCATCTTTTG...CAATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR TCA 72 bp | AAAAAGCCTACAGTAGGTATAAATGGAATAATTAACTaGTCCTGTTTGCTGATGCCCTTTTCCTGGTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: KKPTVGINGIIN*SCLLMPFSWST Trigger: TGTGGACCAGGAAAAGGGCATCAGCAAACAGGATCAGTTAATTATTCCATTTATACCTACTGTAGGCTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| 3UTR TCA 72 bp | GGTATTTTAATGTGGATTTCATTGAAGCTTATGCCATaGATTGTCAAGGGGAGCTACACAAAGAACCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: GILMWISLKLMP*IVKGSYTKNHN Trigger: GTTGTGGTTCTTTGTGTAGCTCCCCTTGACAATTCATGGCATAAGCTTCAATGAAATCCACATTAAAATACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR CCA 72 bp | ATCCTCAGCTTCTGCGGCAAGTTCTTTTTCTTATTTTaGCTAACCACCAGCATATATCTGAATTTCTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ILSFCGKFFFLF*LTTSIYLNFSL Trigger: TAAGGAGAAATTCAGATATATGCTGGTGGTTAGCCAAAATAAGAAAAAGAACTTGCCGCAGAAGCTGAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR TCA 72 bp | CTTCATACTCATGAAATGAAAGAATTTACCACCTCTTaGCATGAAACCACATCTATGTTTGTCTTGCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LHTHEMKEFTTS*HETTSMFVLLY Trigger: GTAAAGCAAGACAAACATAGATGTGGTTTCATGTCAAGAGGTGGTAAATTCTTTCATTTCATGAGTATGAAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | CACTGTGTGGGAGCAAAGAGAACTCCTTACATTCTCTCCCTTTCAATTCTCTCCTGCACTCGGCGCCAGTaGGAGTGCCCTCCCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCVGAKRTPYILSLSILSCTRRQ*ECPPGC Trigger: GCACCCGGGAGGGCACTCGCACTGGCGCCGAGTGCA...GGAGAGAATTGAAAGGGAGAGAATGTAAGGAGTTCTCTTTGCTCCCACACAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | GAACGTCCACTTAAGCTCAGAGACAGCCTCCTGGCAGTATGCTCAGCCAACGGGGAGCTCGCTTCAGGCTaGCAGTTCTGGTCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERPLKLRDSLLAVCSANGELASG*QFWSSR Trigger: CCTTGAAGACCAGAACTGGCAGCCTGAAGCGAGCTC...CCCGTTGGCTGAGCATACTGCCAGGAGGCTGTCTCTGAGCTTAAGTGGACGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | GGGTCTGATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCCGGCGCCAGTGCGAGTaGCCTCCCGGGTGCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: GSDQSLGSGNFLCSHGKFRRQCE*PPGCPI Trigger: GATTGGGCACCCGGGAGGGCACTCGCACTGGCGCCG...GAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGATCAGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCATGAATGCAGAGTCCAGCATGAATGCAGAGTCTGGCATTCTGGGAACCACTCAGCTCCAAACTaGTTCTTCCAGTTGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQHECRVQHECRVWHSGNHSAPN*FFQLQG Trigger: CCCTTGCAACTGGAAGAAGCAGTTTGGAGCTGAGTG...GTTCCCAGAATGCCAGACTCTGCATTCATGCTGGACTCTGCATTCATGCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | GTCTTGCTTTACCATCTCCAGCATGAATGCAGAGTCCAGCATGAATGCAGAGTCACGCACACACTCCACTaGCATTCTCCACAGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYHLQHECRVQHECRVTHTLH*HSPQSD Trigger: GTCTGACTGTGGAGAATGGCAGTGGAGTGTGTGCGT...GACTCTGCATTCATGCTGGACTCTGCATTCATGCTGGAGATGGTAAAGCAAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTCGGCGCCAGTGCGAGTaGCCTCCCGGGTGCCCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSRRQCE*PPGCPI Trigger: GATTGGGCACCCGGGAGGGCACTCGCACTGGCGCCG...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTTGCACTCGGCGCCAGTaGGAGTGCCCTCCCGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSCTRRQ*ECPPGC Trigger: GCACCCGGGAGGGCACTCGCACTGGCGCCGAGTGCA...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTGTTGGACTGGCCTGATTTCTTGTGAGACTTCTCTCTGTGGCTGGCACTGCCAGGAAGGCAGCTaGAAATTTTCTACGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SKCWTGLISCETSLCGWHCQEGS*KFSTLL Trigger: CAGCAACGTAGAAAATTTGCAGCTGCCTTCCTGGCA...GTGCCAGCCACAGAGAGAAGTCTCACAAGAAATCAGGCCAGTCCAACACTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR CCA 90 bp | GTCTTGCTTTACCATCTCCAGCATGAATGCAGAGTCCAGCATGAATGCAGAGTCATCTCTGAGTCTTCATaGTCTGTTTGCACTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLYHLQHECRVQHECRVISESS*SVCTRR Trigger: GCGCCGAGTGCAAACAGACCATGAAGACTCAGAGAT...GACTCTGCATTCATGCTGGACTCTGCATTCATGCTGGAGATGGTAAAGCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR TCA 90 bp | GGGTCTGATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCAGGGCTTGGAGATGGTaGCAGTTTTCTGACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSDQSLGSGNFLCSHGKFRAWRW*QFSDSQ Trigger: CTGACTGTCAGAAAACTGTCACCATCTCCAAGCCCT...GAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGATCAGACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR TCA 90 bp | TTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATTGGACAGCTTCTTACCTTaGGGCTTGGGCTTGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHSLPFNSLHIGATLVQLDSFLP*GLGLVS Trigger: GCTCACCAAGCCCAAGCCTCAAGGTAAGAAGCTGTC...CAATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR CAA 72 bp | AGACAGCCTCCTGGCAGTATGCTCAGCCAACGGGCATaGTTCAATTACTGTCCTAATGTAACTCACTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: RQPPGSMLSQRA*FNYCPNVTHFT Trigger: GGTAAAGTGAGTTACATTAGGACAGTAATTGAACAATGCCCGTTGGCTGAGCATACTGCCAGGAGGCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR TCA 90 bp | CCTTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATCCACAGCTGCCAAGATaGAAATCAATGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PYILSLSILSTLVPHWFNPQLPR*KSMPGR Trigger: CCTTCCTGGCATTGATTTTCATCTTGGCAGCTGTGG...ATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR TCA 90 bp | CCTTACATTCTCTCCCTTTCAATTCTCTCCACATTGGTGCCACATTGGTTCAATTCTTCAAGGCGGTATTaGGGTCACATTCTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYILSLSILSTLVPHWFNSSRRY*GHILPK Trigger: CTTGGGGAGAATGTGACCTCAATACCGCCTTGAAGA...ATTGAACCAATGTGGCACCAATGTGGAGAGAATTGAAAGGGAGAGAATGTAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR CAA 72 bp | AAGATGAAAAGCTTGGCATCTAGAAAGAAACCTCTCTaGTCATCGGCACAAACCACCAGCCATCCTCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KMKSLASRKKPL*SSAQTTSHPQL Trigger: AAGCTGAGGATGGCTGGTGGTTTGTGCCGATGACAAGAGAGGTTTCTTTCTAGATGCCAAGCTTTTCATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR CAA 72 bp | GAATCATTCATCCTTATAGAACCAATGGTGATCTGGTaGGGAGGGTCTGATCAAAGTCTGGGCAGTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESFILIEPMVIW*GGSDQSLGSGN Trigger: ATTCCCACTGCCCAGACTTTGATCAGACCCTCCCAACCAGATCACCATTGGTTCTATAAGGATGAATGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | TTTATCAATCTGCATTTCCTCTCCTACACTGCCACAGGGATGGTGTGTGTATGGACTGCTTCTTCCAGTTaGAAGGGATCTTACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FINLHFLSYTATGMVCVWTASSS*KGSYIS Trigger: AGAGATGTAAGATCCCTTGCAACTGGAAGAAGCAGT...CCATACACACACCATCCCTGTGGCAGTGTAGGAGAGGAAATGCAGATTGATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTGAGCTCGCTTCAGGCTaGCAGTTCTGGTCTTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSELASG*QFWSSR Trigger: CCTTGAAGACCAGAACTGGCAGCCTGAAGCGAGCTC...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR CCA 90 bp | ATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACACATTCTCCCCAAGCCTaGAACTGGTACTTGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: IKVWAVGIFYVPMENSRTHSPQA*NWYLHS Trigger: TGAGTGCAAGTACCAGTTCCAGGCTTGGGGAGAATG...TGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTACGCACACACTCCACTaGCATTCTCCACAGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSTHTLH*HSPQSD Trigger: GTCTGACTGTGGAGAATGGCAGTGGAGTGTGTGCGT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR TCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTCCACAGCTGCCAAGATaGAAATCAATGCCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSPQLPR*KSMPGR Trigger: CCTTCCTGGCATTGATTTTCATCTTGGCAGCTGTGG...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR TCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTTCTTCAAGGCGGTATTaGGGTCACATTCTCCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSSSRRY*GHILPK Trigger: CTTGGGGAGAATGTGACCTCAATACCGCCTTGAAGA...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR TCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTAGGGCTTGGAGATGGTaGCAGTTTTCTGACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSRAWRW*QFSDSQ Trigger: CTGACTGTCAGAAAACTGTCACCATCTCCAAGCCCT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR GCA 90 bp | GTGGAGGTTTTTCCTTGTATTCTTGTTCATGTATGCAGAGAACGTCCACTTAAGCAAGATGAAAATCAATaGCAGGAAGGCAGCTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VEVFPCILVHVCRERPLKQDENQ*QEGSCK Trigger: TTTGCAGCTGCCTTCCTGGCATTGATTTTCATCTTG...CTTAAGTGGACGTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTCACTCAGCTCCAAACTaGTTCTTCCAGTTGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSHSAPN*FFQLQG Trigger: CCCTTGCAACTGGAAGAAGCAGTTTGGAGCTGAGTG...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR CCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTATCTCTGAGTCTTCATaGTCTGTTTGCACTCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSISESS*SVCTRR Trigger: GCGCCGAGTGCAAACAGACCATGAAGACTCAGAGAT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR CCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTCATTCTCCCCAAGCCTaGAACTGGTACTTGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSHSPQA*NWYLHS Trigger: TGAGTGCAAGTACCAGTTCCAGGCTTGGGGAGAATG...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR TCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTCTTTTTCTTCTTCTTTaGCTCCGCTTGAGGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSLFLLL*LRLRLG Trigger: CCCAAGCCTCAAGCGGAGTCAAAGAAGAAGAAAAAG...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTTGCCAGGAAGGCAGCTaGAAATTTTCTACGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSCQEGS*KFSTLL Trigger: CAGCAACGTAGAAAATTTGCAGCTGCCTTCCTGGCA...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
||
| 3UTR CAA 72 bp | GCCATCTTAACTGCCATATTTTGTGGAGGTTTTTCCTaGTATTCTTGTTCATGTATGCAGAGAACGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AILTAIFCGGFS*YSCSCMQRTST Trigger: AGTGGACGTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| 3UTR CAA 72 bp | CATCCTCAGCTTCTGCGGCAAGTTCTTTTTCTTATTTaGGCTAACCACCAGCATATATCTGAATTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPQLLRQVLFLI*ANHQHISEFLL Trigger: AAGGAGAAATTCAGATATATGCTGGTGGTTAGCCAAAATAAGAAAAAGAACTTGCCGCAGAAGCTGAGGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
||
| CDS-3UTR TCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTATGGTGACAGTTTTCTaGCAGTCAGCATTGTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSMVTVF*QSALCR Trigger: TCTGCACAATGCTGACTGTCAGAAAACTGTCACCAT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTAGCAGTGTCCACAGCTaGCAAGATGAAAATCAATGC | + |
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Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSSSVHS*QDENQC Trigger: GCATTGATTTTCATCTTGGCAGCTGTGGACACTGCT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| 3UTR CAA 72 bp | AACTGCCATATTTTGTGGAGGTTTTTCCTTGTATTCTaGTTCATGTATGCAGAGAACGTCCACTTAAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: NCHILWRFFLVF*FMYAENVHLSS Trigger: TGAGCTTAAGTGGACGTTCTCTGCATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| 3UTR CAA 72 bp | AGTTACCCAAGCAGCAGCCATCTTAACTGCCATATTTaGTGGAGGTTTTTCCTTGTATTCTTGTTCATGTAT | + |
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Preference number: 4 (lower is better) Translates to: SYPSSSHLNCHI*WRFFLVFLFMY Trigger: ATACATGAACAAGAATACAAGGAAAAACCTCCACAAAATATGGCAGTTAAGATGGCTGCTGCTTGGGTAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTCAAGATGAAAATCAATaGCAGGAAGGCAGCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSQDENQ*QEGSCK Trigger: TTTGCAGCTGCCTTCCTGGCATTGATTTTCATCTTG...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS-3UTR GCA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTACTGCTTCTTCCAGTTaGAAGGGATCTTACATCTCT | + |
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Preference number: 4 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSTASSS*KGSYIS Trigger: AGAGATGTAAGATCCCTTGCAACTGGAAGAAGCAGT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS GCA 90 bp | TCCAGTTGCAAGGGATCTTACATCTCTGAGTCTTCATGGTCTGTTTaGACTCGGCGCCAGTGCGAGTGCCCTCCCGGGTGCCCAATCCAC | + |
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Preference number: 5 (lower is better) Translates to: SSCKGSYISESSWSV*TRRQCECPPGCPIH Trigger: GTGGATTGGGCACCCGGGAGGGCACTCGCACTGGCGCCGAGTGCAAACAGACCATGAAGACTCAGAGATGTAAGATCCCTTGCAACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS CCA 90 bp | ACTGCTTCTTCCAGTTGCAAGGGATCTTACATCTCTGAGTCTTCATaGTCTGTTTGCACTCGGCGCCAGTGCGAGTGCCCTCCCGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: TASSSCKGSYISESS*SVCTRRQCECPPGC Trigger: GCACCCGGGAGGGCACTCGCACTGGCGCCGAGTGCAAACAGACCATGAAGACTCAGAGATGTAAGATCCCTTGCAACTGGAAGAAGCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS TCA 90 bp | GCAGAGCTCGCTTCAGGCTGCCAGTTCTGGTCTTCAAGGCGGTATTaGGGTCACATTCTCCCCAAGCCTGGAACTGGTACTTGCACTCAG | + |
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Preference number: 5 (lower is better) Translates to: AELASGCQFWSSRRY*GHILPKPGTGTCTQ Trigger: CTGAGTGCAAGTACCAGTTCCAGGCTTGGGGAGAATGTGACCTCAATACCGCCTTGAAGACCAGAACTGGCAGCCTGAAGCGAGCTCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS-3UTR CAA 90 bp | GAACGTCCACTTAAGCTCAGAGACAGCCTCCTGGCAGTATGCTCAGCCAACGGGAGCTTGCCACAGGGCTaGGAGATGGTGACAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ERPLKLRDSLLAVCSANGSLPQG*EMVTVF Trigger: GAAAACTGTCACCATCTCCAAGCCCTGTGGCAAGCT...CCCGTTGGCTGAGCATACTGCCAGGAGGCTGTCTCTGAGCTTAAGTGGACGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| CDS-3UTR CAA 90 bp | GTCCACTTAAGCTCAGAGACAGCCTCCTGGCAGTATGCTCAGCCAACGGGCATTGTCTTCAAGGCGGTATaGAGGTCACATTCTCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: VHLSSETASWQYAQPTGIVFKAV*RSHSPQ Trigger: TTGGGGAGAATGTGACCTCAATACCGCCTTGAAGAC...AATGCCCGTTGGCTGAGCATACTGCCAGGAGGCTGTCTCTGAGCTTAAGTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| CDS-3UTR CAA 90 bp | TGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCTAGAACAGAGTCCGGGGTCTTCATGGTCTGTTaGCACTCGGCGCCAGTGCGA | + |
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Preference number: 5 (lower is better) Translates to: WAVGIFYVPMENSRTESGVFMVC*HSAPVR Trigger: TCGCACTGGCGCCGAGTGCAAACAGACCATGAAGAC...CCCGGACTCTGTTCTAGAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| CDS-3UTR CAA 90 bp | GTCTTGCTTTACCATCTCCAGCATGAATGCAGAGTCCAGCATGAATGCAGAGTCGGACAGCTTCTTACCTaGAGGCTTGGGCTTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: VLLYHLQHECRVQHECRVGQLLT*RLGLGE Trigger: CTCACCAAGCCCAAGCCTCAAGGTAAGAAGCTGTCC...GACTCTGCATTCATGCTGGACTCTGCATTCATGCTGGAGATGGTAAAGCAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| CDS TCA 90 bp | GTTTCTCTTTCTTCCCGGCCTCAGCAGTGTCCACAGCTGCCAAGATaGAAATCAATGCCAGGAAGGCAGCTGCAAATTTTCTACGTTGCT | + |
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Preference number: 5 (lower is better) Translates to: VSLSSRPQQCPQLPR*KSMPGRQLQIFYVA Trigger: AGCAACGTAGAAAATTTGCAGCTGCCTTCCTGGCATTGATTTTCATCTTGGCAGCTGTGGACACTGCTGAGGCCGGGAAGAAAGAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS-3UTR CAA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTGTCTTCATGGTCTGTTaGCACTCGGCGCCAGTGCGA | + |
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Preference number: 5 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSVFMVC*HSAPVR Trigger: TCGCACTGGCGCCGAGTGCAAACAGACCATGAAGAC...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS-3UTR CAA 90 bp | GGGTCTGATCAAAGTCTGGGCAGTGGGAATTTTCTATGTTCCCATGGAAAATTCAACTGCTTCTTCCAGTaGCAAGGGATCTTACATCTC | + |
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Preference number: 5 (lower is better) Translates to: GSDQSLGSGNFLCSHGKFNCFFQ*QGILHL Trigger: GAGATGTAAGATCCCTTGCAACTGGAAGAAGCAGTT...GAATTTTCCATGGGAACATAGAAAATTCCCACTGCCCAGACTTTGATCAGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201321.2 |
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| CDS-3UTR CAA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTGCCTGGAACTGGTACTaGCACTCAGCTCCAAACTGC | + |
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Preference number: 5 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSAWNWY*HSAPNC Trigger: GCAGTTTGGAGCTGAGTGCAAGTACCAGTTCCAGGC...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS-3UTR CAA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTAGCTTGCCACAGGGCTaGGAGATGGTGACAGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSSLPQG*EMVTVF Trigger: GAAAACTGTCACCATCTCCAAGCCCTGTGGCAAGCT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS-3UTR CAA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTGTCTTCAAGGCGGTATaGAGGTCACATTCTCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSVFKAV*RSHSPQ Trigger: TTGGGGAGAATGTGACCTCAATACCGCCTTGAAGAC...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS-3UTR CAA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTCCTTTTTCTTCTTCTTaGACTCCGCTTGAGGCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSPFSSS*TPLEAW Trigger: CCAAGCCTCAAGCGGAGTCAAAGAAGAAGAAAAAGG...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS-3UTR CAA 90 bp | TTACCTCAATCCTACCTCCTATTATGTACTACAGAGTTCAACTTCCTAAATAGTAACTGCTTCTTCCAGTaGCAAGGGATCTTACATCTC | + |
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Preference number: 5 (lower is better) Translates to: LPQSYLLLCTTEFNFLNSNCFFQ*QGILHL Trigger: GAGATGTAAGATCCCTTGCAACTGGAAGAAGCAGTT...ACTATTTAGGAAGTTGAACTCTGTAGTACATAATAGGAGGTAGGATTGAGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000101534.5 |
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| CDS GCA 72 bp | TCTGAGTCTTCATGGTCTGTTTGCACTCGGCGCCAGTaGGAGTGCCCTCCCGGGTGCCCAATCCACAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SESSWSVCTRRQ*ECPPGCPIHSP Trigger: GGGACTGTGGATTGGGCACCCGGGAGGGCACTCGCACTGGCGCCGAGTGCAAACAGACCATGAAGACTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS CAA 72 bp | CGCTTCAGGCTGCCAGTTCTGGTCTTCAAGGCGGTATaGAGGTCACATTCTCCCCAAGCCTGGAACTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: RFRLPVLVFKAV*RSHSPQAWNWY Trigger: GTACCAGTTCCAGGCTTGGGGAGAATGTGACCTCAATACCGCCTTGAAGACCAGAACTGGCAGCCTGAAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS CAA 90 bp | TGCAGAGCTCGCTTCAGGCTGCCAGTTCTGGTCTTCAAGGCGGTATaGAGGTCACATTCTCCCCAAGCCTGGAACTGGTACTTGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: CRARFRLPVLVFKAV*RSHSPQAWNWYLHS Trigger: TGAGTGCAAGTACCAGTTCCAGGCTTGGGGAGAATGTGACCTCAATACCGCCTTGAAGACCAGAACTGGCAGCCTGAAGCGAGCTCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS TCA 72 bp | GCTTCAGGCTGCCAGTTCTGGTCTTCAAGGCGGTATTaGGGTCACATTCTCCCCAAGCCTGGAACTGGTACT | + |
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Preference number: 6 (lower is better) Translates to: ASGCQFWSSRRY*GHILPKPGTGT Trigger: AGTACCAGTTCCAGGCTTGGGGAGAATGTGACCTCAATACCGCCTTGAAGACCAGAACTGGCAGCCTGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS CCA 72 bp | TCCAGTTGCAAGGGATCTTACATCTCTGAGTCTTCATaGTCTGTTTGCACTCGGCGCCAGTGCGAGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SSCKGSYISESS*SVCTRRQCECP Trigger: AGGGCACTCGCACTGGCGCCGAGTGCAAACAGACCATGAAGACTCAGAGATGTAAGATCCCTTGCAACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS GCA 72 bp | TTTCTCTTTCTTCCCGGCCTCAGCAGTGTCCACAGCTaGCAAGATGAAAATCAATGCCAGGAAGGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: FLFLPGLSSVHS*QDENQCQEGSC Trigger: GCAGCTGCCTTCCTGGCATTGATTTTCATCTTGGCAGCTGTGGACACTGCTGAGGCCGGGAAGAAAGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS CCA 72 bp | GCGGTATTGAGGTCACATTCTCCCCAAGCCTGGAACTaGTACTTGCACTCAGCTCCAAACTGCTTCTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AVLRSHSPQAWN*YLHSAPNCFFQ Trigger: CTGGAAGAAGCAGTTTGGAGCTGAGTGCAAGTACCAGTTCCAGGCTTGGGGAGAATGTGACCTCAATACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS CCA 72 bp | TTCAAGGCGGTATTGAGGTCACATTCTCCCCAAGCCTaGAACTGGTACTTGCACTCAGCTCCAAACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FKAVLRSHSPQA*NWYLHSAPNCF Trigger: GAAGCAGTTTGGAGCTGAGTGCAAGTACCAGTTCCAGGCTTGGGGAGAATGTGACCTCAATACCGCCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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| CDS GCA 72 bp | AGCTGCCAAGATGAAAATCAATGCCAGGAAGGCAGCTaGAAATTTTCTACGTTGCTGCTGATATTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: SCQDENQCQEGS*KFSTLLLILLG Trigger: TCCCAGCAATATCAGCAGCAACGTAGAAAATTTGCAGCTGCCTTCCTGGCATTGATTTTCATCTTGGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000101534.5 ENSMUST00000201321.2 |
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