RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTK7 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023972

Ensembl transcript IDs: ENSMUST00000044442.10

Found 297 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTTGTGGCGAAGAGAAACGCCTAGGCACTGCCAGTCTTCAGCAATaGCTGCTGTGCTTGGGCAGGGACCCCAGGGCCAAGGACAGGGTT +
Preference number: 1 (lower is better)
Translates to: GCGEEKRLGTASLQQ*LLCLGRDPRAKDRV
Trigger: AACCCTGTCCTTGGCCCTGGGGTCCCTGCCCAAGCACAGCAGGCATTGCTGAAGACTGGCAGTGCCTAGGCGTTTCTCTTCGCCACAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTaGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCGAATCAGCCTCC +
Preference number: 1 (lower is better)
Translates to: PILSLIREGVAKKDA*SKVLVTQPGFESAS
Trigger: GGAGGCTGATTCGAACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR GCA 90 bp GGTACCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATaGCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCGAATCAGC +
Preference number: 1 (lower is better)
Translates to: GTHTVPDKGRGGKER*LVQSLSHPAWVRIS
Trigger: GCTGATTCGAACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR GCA 90 bp CCCACTAGGTGGGACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTaGCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAG +
Preference number: 1 (lower is better)
Translates to: PTRWDLWAKRPVGPV*PELSWNFEYICVLK
Trigger: CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCACCTAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CCA 90 bp CTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTaGAACTTTGAGTATATCTGTGTATTAAAGAAGTCCCCCAAACCT +
Preference number: 1 (lower is better)
Translates to: LWAKRPVGPVCPELS*NFEYICVLKKSPKP
Trigger: AGGTTTGGGGGACTTCTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR TCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAACTGCCCACGCCATCCTaGGGACAGCCTGCAAGGCTC +
Preference number: 2 (lower is better)
Translates to: PILSLIREGVAKKDAWSKLPTPS*GQPARL
Trigger: GAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAG...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR GCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTAGAGGGGTTCTCCCCTaGCCACGCCATCCTGAGGAC +
Preference number: 2 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVRGVLP*PRHPED
Trigger: GTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCT...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR GCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGCAGCAATGCCTGCTGTaGTTGGGCAGGGACCCCAGG +
Preference number: 2 (lower is better)
Translates to: GRAELGQKKSQARNWGYLQQCLL*LGRDPR
Trigger: CCTGGGGTCCCTGCCCAAGCACAGCAGGCATTGCTG...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR GCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTGCCAGTCTTCAGCAATaGCTGCTGTGCTTGGGCAGG +
Preference number: 2 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVASLQQ*LLCLGR
Trigger: CCTGCCCAAGCACAGCAGGCATTGCTGAAGACTGGC...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR GCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAAGGACAGGGTTATCCTaGCCATCATGCTGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: PILSLIREGVAKKDAWSKRTGLS*PSCCRL
Trigger: GAGCCTGCAGCATGATGGGCAGGATAACCCTGTCCT...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR CCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCCTCCCCAGGCAACATTaGCAGATTAGTGGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: KRPVGPVCPELSWNFEYILPRQH*QISGRA
Trigger: AGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAG...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CCA 72 bp GGCCAGGAGTCTGGCTTAGTGTGCACAAGCCCACGGTaGGGAGGACTCCACTGCTGTGACCTCCTAGACCCC +
Preference number: 3 (lower is better)
Translates to: GQESGLVCTSPR*GGLHCCDLLDP
Trigger: GGGGTCTAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCCAGACTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR CAA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACAGCCTCCCCAGTGGTaGTGGCGAAGAGAAACGCCT +
Preference number: 3 (lower is better)
Translates to: SPSPALPRQHWQISGRAEQPPQW*WRRETP
Trigger: AGGCGTTTCTCTTCGCCACAACCACTGGGGAGGCTG...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR GCA 72 bp CCCCAGTGGTTGTGGCGAAGAGAAACGCCTAGGCACTaGCAGTCTTCAGCAATGCCTGCTGTGCTTGGGCAG +
Preference number: 3 (lower is better)
Translates to: PQWLWRRETPRH*QSSAMPAVLGQ
Trigger: CTGCCCAAGCACAGCAGGCATTGCTGAAGACTGGCAGTGCCTAGGCGTTTCTCTTCGCCACAACCACTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CCA 72 bp GAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTaGGTTCGAATCAGCCTCCCCAGTGGTTGTGGCGAA +
Preference number: 3 (lower is better)
Translates to: ERCLVQSLSHPA*VRISLPSGCGE
Trigger: TTCGCCACAACCACTGGGGAGGCTGATTCGAACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR GCA 72 bp ACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATaGCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: TVPDKGRGGKER*LVQSLSHPAWV
Trigger: AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR GCA 72 bp TGGGACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTaGCCAGAGTTATCTTGGAACTTTGAGTATATCTGT +
Preference number: 3 (lower is better)
Translates to: WDLWAKRPVGPV*PELSWNFEYIC
Trigger: ACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CCA 72 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTaGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCGAA +
Preference number: 3 (lower is better)
Translates to: SLIREGVAKKDA*SKVLVTQPGFE
Trigger: TTCGAACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR CAA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCGTCTCAGGCCAGAAATaGGGGTTACCTGAGGTACCC +
Preference number: 3 (lower is better)
Translates to: KRPVGPVCPELSWNFEYIVSGQK*GLPEVP
Trigger: GGGTACCTCAGGTAACCCCAATTTCTGGCCTGAGAC...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR-3UTR CAA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGGTGGCAGAGCTGAACTaGGCCAAAAGAAGTCTCAGG +
Preference number: 3 (lower is better)
Translates to: GPVCPELSWNFEYICVLKVAELN*AKRSLR
Trigger: CCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCCAC...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR TCA 72 bp CGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTaGGTATATCTGTGTATTAAAGAAGTCCCCCAAACC +
Preference number: 3 (lower is better)
Translates to: RWSCVPRVILEL*VYLCIKEVPQT
Trigger: GGTTTGGGGGACTTCTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CCA 72 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTaGAACTTTGAGTATATCTGTGTATTAAAGAAGTCC +
Preference number: 3 (lower is better)
Translates to: KRPVGPVCPELS*NFEYICVLKKS
Trigger: GGACTTCTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR TCA 72 bp ATAAAACAAACAAACAATAACAACAACAATAAAGTATaGGGCCAGGGTGGCCCTCCCTCCCTACTTCCTCCA +
Preference number: 3 (lower is better)
Translates to: IKQTNNNNNNKV*GQGGPPSLLPP
Trigger: TGGAGGAAGTAGGGAGGGAGGGCCACCCTGGCCTCATACTTTATTGTTGTTGTTATTGTTTGTTTGTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAGGGCCTGGGCCTCGATaGTGCCGGCTGGGGTACTGC +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLGPGPR*CRLGYC
Trigger: GCAGTACCCCAGCCGGCAGCATCGAGGCCCAGGCCC...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCCCACTAGGTGGGACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGTGGCTGCTGCAGGCCTaGCCAAAGGCATTGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PPLGGTCGPRGPLVLCAQWLLQA*PKALWA
Trigger: TGCCCACAATGCCTTTGGCCAGGCCTGCAGCAGCCA...CTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCACCTAGTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCCCACTAGGTGGGACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTTTTCCAGCACCTaGACTCGGGCCTGGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PPLGGTCGPRGPLVLCAQSFSST*TRAWAS
Trigger: CGAGGCCCAGGCCCGAGTCCAGGTGCTGGAAAAACT...CTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCACCTAGTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAAGCGCCCGGCGCCCTTaGAGTGCATCCTGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLSARRP*SASWED
Trigger: GTCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCT...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp CCCCCACTAGGTGGGACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGGCAAAGGCCCACCATTaGGGCACTCCATCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PPLGGTCGPRGPLVLCAQAKAHH*GTPSLA
Trigger: AGCCAGAGATGGAGTGCCTCAATGGTGGGCCTTTGC...CTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCACCTAGTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCTGCTGGCGATCTCACTaGAGGAGGGCCGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSCWRSH*RRAGPW
Trigger: CCAAGGACCGGCCCTCCTTCAGTGAGATCGCCAGCA...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCGGACAGGCACCCCATTaGGCAGCCAGTACACGTGCA +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSGQAPH*AASTRA
Trigger: TGCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCC...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTACCGGCGCCCTTGAAGTaGATCCTGGGAGGACGGCTC +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLPAPLK*ILGGRL
Trigger: GAGCCGTCCTCCCAGGATGCACTTCAAGGGCGCCGG...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCCCACTAGGTGGGACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGGCAGCAGAGAGCCATTaGCAAACACCACAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PPLGGTCGPRGPLVLCAQAAESH*QTPQLC
Trigger: GCAGAGCTGTGGTGTTTGCCAATGGCTCTCTGCTGC...CTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCACCTAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCCCACTAGGTGGGACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGTGTACCAGATCACAGTaGGCTTGGGTGTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: PPLGGTCGPRGPLVLCAQCTRSQ*AWVWPV
Trigger: CACAGGCCACACCCAAGCCCACTGTGATCTGGTACA...CTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCACCTAGTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACAGCAGCCAGTACACGTaGACCGGGTCCGGAGCCTCC +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNSSQYT*TGSGAS
Trigger: GGAGGCTCCGGACCCGGTGCACGTGTACTGGCTGCT...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACCCTGGGCCTCGATGCTaGCGGCTGGGGTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNPGPRC*RLGYCS
Trigger: TGAGCAGTACCCCAGCCGGCAGCATCGAGGCCCAGG...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTATGGACAGGTGCTCCATaGCCAGGGCCACCTGGGAAC +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLWTGAP*PGPPGN
Trigger: GTTCCCAGGTGGCCCTGGGCATGGAGCACCTGTCCA...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAATGGGGGAGGGCTGCCTaGGCCCTCCGAGTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: SPSPALPRQHWQISGRAEWGRAA*ALRVFH
Trigger: ATGGAAGACTCGGAGGGCCCAGGCAGCCCTCCCCCA...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCTCCCGGCCAGTGGCTaGGCAGGGCACCGTAGCCTC +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVLPASG*AGHRSL
Trigger: GAGGCTACGGTGCCCTGCTCAGCCACTGGCCGGGAG...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCGCTGACCAGCCAGGTTaGTTGCATGGCAGGTGTAGA +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSADQPG*LHGRCR
Trigger: TCTACACCTGCCATGCAAGCAACCTGGCTGGTCAGC...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCCCCTCAGGCTGTTTCTaGAGCCGCTTGGCTTTACAC +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSPSGCF*SRLALH
Trigger: GTGTAAAGCCAAGCGGCTGCAGAAACAGCCTGAGGG...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCAAGTCCAGCTGTTGTTaGTCGTCCCTGCTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSKSSCC*SSLLCR
Trigger: CCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTT...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAAGGCTCGGGGGTGGCTaGGCTGAAAACTGGCAATGG +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLRLGGG*AENWQW
Trigger: CCATTGCCAGTTTTCAGCCCAGCCACCCCCGAGCCT...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCTCCAGCTGGCTGTCTTaGGGCTTCCTAAGCCATGTG +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSSSWLS*GFLSHV
Trigger: CACATGGCTTAGGAAGCCCCAAGACAGCCAGCTGGA...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCGAGGCACTCCATCTCTaGCTCCTCCCCCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLAEALHL*LLPLRL
Trigger: CAGCCTGAGGGGGAGGAGCCAGAGATGGAGTGCCTC...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAGGACTTCCTCTCCAGTaGCGTTATCCCGAGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLGLPLQ*RYPEPH
Trigger: GTGTGGCTCGGGATAACGTCACTGGAGAGGAAGTCC...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCTGTGACATCGCAGTGTaGCCTGGGTCTGGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLACDIAV*PGSGAG
Trigger: TCCAGCCCCAGACCCAGGTCACACTGCGATGTCACA...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACACATCCTGTCGCCGCTaGCCAGCCAGGTTGCTTGCA +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNTSCRR*PARLLA
Trigger: TGCAAGCAACCTGGCTGGTCAGCGGCGACAGGATGT...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCTCTTTGCCTTTCCACTaGATGAGAGGCTTGGGGTCG +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSSLPFH*MRGLGS
Trigger: CGACCCCAAGCCTCTCATTCAGTGGAAAGGCAAAGA...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACGAAACTCAGGCTGCTaGCCTGGGCAAACCGTCGCT +
Preference number: 4 (lower is better)
Translates to: SPSPALPRQHWQISGRAERNSGC*PGQTVA
Trigger: AGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCG...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAGCTTCTGAGGCTGGGTaGTTCAGGACCACAGGACCT +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLASEAG*FRTTGP
Trigger: AGGTCCTGTGGTCCTGAAGCACCCAGCCTCAGAAGC...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCGCCGCTAAGTCCTTGTaGACAAAGCGGTTGTTGGAC +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSAAKSL*TKRLLD
Trigger: GTCCAACAACCGCTTTGTGCACAAGGACTTAGCGGC...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAATTCCAGGACAATGGGTaGGCCCCTCTGTCCCTGACC +
Preference number: 4 (lower is better)
Translates to: SPSPALPRQHWQISGRAEFQDNG*APLSLT
Trigger: GGTCAGGGACAGAGGGGCCCACCCATTGTCCTGGAA...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTACTGCCAGGTGGAGAGTaGCTTCCAGGACAATGGGTG +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLLPGGE*LPGQWV
Trigger: CACCCATTGTCCTGGAAGCCACTCTCCACCTGGCAG...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACAGCTCAAGGCCCTTCTaGTGGACCCTGCCATGGGCA +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNSSRPF*WTLPWA
Trigger: TGCCCATGGCAGGGTCCACCAGAAGGGCCTTGAGCT...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTACCTGGACTCGGGCCTaGGCCTCGATGCTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVTWTRA*ASMLPA
Trigger: AGCCGGCAGCATCGAGGCCCAGGCCCGAGTCCAGGT...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCCTCCATGCACTGCTGTaGCTGCGGTGGTGGCGTGAA +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLALHALL*LRWWRE
Trigger: TTCACGCCACCACCGCAGCCACAGCAGTGCATGGAG...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCACCAGGGAACCGTTCTaGAAGATGTGCATCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSTREPF*KMCILG
Trigger: ACCCAGGATGCACATCTTCCAGAACGGTTCCCTGGT...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CAA 72 bp CCCCCACTAGGTGGGACCTGTGGGCCAAGAGGCCCGTaGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: PPLGGTCGPRGP*VLCAQSYLGTL
Trigger: CAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTCCCACCTAGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGGCAGAAGCAGGGCTCTaGGCAGAGTCAGCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLAEAGL*AESAGG
Trigger: CCCGCCCGCTGACTCTGCTCAGAGCCCTGCTTCTGC...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAATCTCGGCTGATGGCTaGCCATTCTGCAAAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLISADG*PFCKGP
Trigger: TGGGCCTTTGCAGAATGGTCAGCCATCAGCCGAGAT...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCCTGCCTCTGGGCACTaGTCAGGCAGTTGCGAGCCG +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVPASGH*SGSCEP
Trigger: CGGCTCGCAACTGCCTGATCAGTGCCCAGAGGCAGG...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCAGAGGGACTCCAGCATaGTCCCACCAGACACTGGGT +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLARGTPA*SHQTLG
Trigger: ACCCAGTGTCTGGTGGGAGCATGCTGGAGTCCCTCT...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTGCCGGCTGGGGTACTaGTCACGCAACGGTACAATG +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNCRLGY*SRNGTM
Trigger: CATTGTACCGTTGCGTGAGCAGTACCCCAGCCGGCA...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAAATGCACTGCTGTGGCTaGGGTGGTGGCGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: SPSPALPRQHWQISGRAEMHCCG*GGGVNL
Trigger: CAAGTTCACGCCACCACCGCAGCCACAGCAGTGCAT...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCCTGTGGCTCGTTGGATaGAATGCAAGTGTAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSLWLVG*NASVVA
Trigger: GGCAACTACACTTGCATTGCATCCAACGAGCCACAG...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACGCCAGCCTGCAAGTCTaGCAGCACCTCATCATCTGC +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNASLQV*QHLIIC
Trigger: GCAGATGATGAGGTGCTGGCAGACTTGCAGGCTGGC...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGGGGCAGCCTTCGGGCTaGGGGAGTCGAGCCTTGCCA +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLGQPSG*GSRALP
Trigger: TGGCAAGGCTCGACTCCCGCAGCCCGAAGGCTGCCC...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCTCAGGCTGCTGCCCTaGGCAAACCGTCGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVLRLLP*ANRRSV
Trigger: CACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAG...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCACCTGGGTCTGGGGCTaGATCTCAGCTTCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLATWVWG*ISASEA
Trigger: AGCCTCAGAAGCTGAGATCCAGCCCCAGACCCAGGT...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACCTCAAGGTGAAGTTCTaGCTGCTGCAGGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNLKVKF*LLQAWP
Trigger: TGGCCAGGCCTGCAGCAGCCAGAACTTCACCTTGAG...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTACTGCTGTGGCTGCGGTaGTGGCGTGAACTTGAGTTT +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLLLWLR*WRELEF
Trigger: AAACTCAAGTTCACGCCACCACCGCAGCCACAGCAG...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTGCAACACTCAAGGTaGAGTTCTGGCTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SPSPALPRQHWQISGRAELQHSR*SSGCCR
Trigger: CCTGCAGCAGCCAGAACTTCACCTTGAGTGTTGCAG...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGACCGTCAGCTGGACATaGGCGCGGATCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: GQKLGLPEVPILSLIREGTVSWT*ARIWPC
Trigger: ACAGGGCCAGATCCGCGCTCATGTCCAGCTGACGGT...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGCAGGTGTAGGAGCCTaGGTCCTCAGGGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKAGVGA*VLRGHV
Trigger: GACGTGGCCCCTGAGGACTCAGGCTCCTACACCTGC...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAAACAACATCCTGAGGTaGCAGCACCACCCTGGCAAA +
Preference number: 4 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLNNILR*QHHPGK
Trigger: TTTGCCAGGGTGGTGCTGGCACCTCAGGATGTTGTT...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCGTTGTTGCTCGTCCCTaGTCTGCAGGCTCTTCACGA +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLAVVARP*SAGSSR
Trigger: TCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAAC...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGCTCGATGCTGCCGGCTaGGGTACTGCTCACGCAACG +
Preference number: 4 (lower is better)
Translates to: GQKLGLPEVPILSLIREGLDAAG*GTAHAT
Trigger: CGTTGCGTGAGCAGTACCCCAGCCGGCAGCATCGAG...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGGGGTGCCCGTCAATGTaGCATCGCAGTGTGACCTGG +
Preference number: 4 (lower is better)
Translates to: GQKLGLPEVPILSLIREGGCPSM*HRSVTW
Trigger: CCAGGTCACACTGCGATGTCACATTGACGGGCACCC...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGTCCTCAAAGACCCACTaGAGGCTCGGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLSSKTH*RLGGGW
Trigger: CCAGCCACCCCCGAGCCTGCAGTGGGTCTTTGAGGA...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAACAAACACCACAGCTCTaGGGAGGTGAGGGGGACGGC +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKQTPQL*GGEGDG
Trigger: GCCGTCCCCCTCACCTCCGCAGAGCTGTGGTGTTTG...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTTGCTCGTCCCTGCTCTaGAGGCTCTTCACGAGGACC +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVCSSLL*RLFTRT
Trigger: GGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCA...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGACGCCTGCATTCCGTaGCCGGACTTGGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKDACIP*PDLGQQ
Trigger: CTGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTC...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTCAATCTCTGCCAGGTaGAGAGTGGCTTCCAGGACA +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNSISAR*RVASRT
Trigger: TGTCCTGGAAGCCACTCTCCACCTGGCAGAGATTGA...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCCTGTGGCTGCGGTGGTaGCGTGAACTTGAGTTTTTC +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLALWLRW*RELEFF
Trigger: GAAAAACTCAAGTTCACGCCACCACCGCAGCCACAG...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCGGCCCTGTGGCTCGTTaGATGCAATGCAAGTGTAGT +
Preference number: 4 (lower is better)
Translates to: VQPSPGNIGRLVAELNLAGPVAR*MQCKCS
Trigger: ACTACACTTGCATTGCATCCAACGAGCCACAGGGCC...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGCTGGATCATCTTGTATaGGGGAGGGCTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GQKLGLPEVPILSLIREGLDHLV*GRAAWA
Trigger: GGCCCAGGCAGCCCTCCCCCATACAAGATGATCCAG...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACGTTTCTGCAGCCGCTTaGCTTTACACCGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNVSAAA*LYTASC
Trigger: GCAAGAAGCGGTGTAAAGCCAAGCGGCTGCAGAAAC...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGGCGCTTGTTGGTGGCTaGGGGGCCAGAGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: RAELGQKKSQARNWGYLRALVGG*GARAQA
Trigger: AGCTTGGGCTCTGGCCCCCCAGCCACCAACAAGCGC...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGGCTACAACAACATCCTaGGGTGCCAGCACCACCCTG +
Preference number: 4 (lower is better)
Translates to: GQKLGLPEVPILSLIREGATTTS*GASTTL
Trigger: CAGGGTGGTGCTGGCACCTCAGGATGTTGTTGTAGC...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAAGGTGCTGAGGGGCTGTaGCTTCAACTTTTCATCCTT +
Preference number: 4 (lower is better)
Translates to: SPSPALPRQHWQISGRAEGAEGL*LQLFIL
Trigger: AAGGATGAAAAGTTGAAGTCACAGCCCCTCAGCACC...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGCTGCGAAACTCAGGCTaGTGCCCTGGGCAAACCGTC +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLLRNSG*CPGQTV
Trigger: GACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAG...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGGCAAGTAGCCAGGCTTaGCCTCTTCCAGCTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GQKLGLPEVPILSLIREGASSQA*PLPAGC
Trigger: ACAGCCAGCTGGAAGAGGGCAAGCCTGGCTACTTGC...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTTCAAACTCCATGCACTaGTGTGGCTGCGGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVSNSMH*CGCGGG
Trigger: GCCACCACCGCAGCCACAGCAGTGCATGGAGTTTGA...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAACCTTCCTCTACGCCCTaGGCCTTTGCCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKPSSTP*AFARNT
Trigger: GGTGTTCCTGGCAAAGGCGCAGGGCGTAGAGGAAGG...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAACGAGCCTTGCCAGCCTaGAAGTCTGCCAGCACCTCA +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKRALPA*KSASTS
Trigger: TGAGGTGCTGGCAGACTTGCAGGCTGGCAAGGCTCG...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTTCACTGCTTGCTGTCTaGAGGGCTGTCTCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVSLLAV*RAVSQG
Trigger: ACCCTGGGAGACAGCCCTGCAGACAGCAAGCAGTGA...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACGCTGAAAACTGGCAATaGAACATGGCCTCCTCGTTC +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNAENWQ*NMASSF
Trigger: GAACGAGGAGGCCATGTTCCATTGCCAGTTTTCAGC...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGTTCCGTGGCCGGACTTaGGTCAGCAGCAGAGAGCCA +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLFRGRT*VSSREP
Trigger: TGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAA...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAATGGCTTCCAGGACAATaGGTGGGCCCCTCTGTCCCT +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKWLPGQ*VGPSVP
Trigger: AGGGACAGAGGGGCCCACCCATTGTCCTGGAAGCCA...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGTCAAGGCCCTTCTGGTaGACCCTGCCATGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLSRPFW*TLPWAG
Trigger: TCCTGCCCATGGCAGGGTCCACCAGAAGGGCCTTGA...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCGCAGCAGCGCTGTGTaGCCCTGGTACACAGTTGTA +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVRSSAV*PWYTVV
Trigger: TACAACTGTGTACCAGGGCCACACAGCGCTGCTGCG...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAACTGGATCTCAGCTTCTaGGGCTGGGTGCTTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKLDLSF*GWVLQD
Trigger: GTCCTGAAGCACCCAGCCTCAGAAGCTGAGATCCAG...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCTCCTCTCCCTGCTGCTaGCGGTGTGGGTGCTCTGAT +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVSSPCC*RCGCSD
Trigger: ATCAGAGCACCCACACCGTCAGCAGCAGGGAGAGGA...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACCAATGCAAGTGTAGTTaGCAGCATCATCTCGGGTCA +
Preference number: 4 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNQCKCS*QHHLGS
Trigger: TGACCCGAGATGATGCTGGCAACTACACTTGCATTG...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTATGGGGGAGGGCTaGCTGGGCCCTCCGAGTCTT +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYICMGEG*LGPPSL
Trigger: AAGACTCGGAGGGCCCAGGCAGCCCTCCCCCATACA...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCGCGGACACCTTCACCTaGCTCTGGGCACTGATCAGG +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVADTFT*LWALIR
Trigger: CCTGATCAGTGCCCAGAGGCAGGTGAAGGTGTCCGC...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCCGTCGCTCCGTGTCCTaGACAGGCACCCCATTGAGC +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYIRRSVS*TGTPLS
Trigger: GCTCAATGGGGTGCCTGTCCAGGACACGGAGCGACG...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGCGGATCTGGCCCTGTaGCTCGTTGGATGCAATGCA +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKADLAL*LVGCNA
Trigger: TGCATTGCATCCAACGAGCCACAGGGCCAGATCCGC...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCGGGCCTCTGTGTGCCTaGTGTTACAGCTGTTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVGPLCA*CYSCCQ
Trigger: CTGGCAACAGCTGTAACATCAGGCACACAGAGGCCC...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCCCTTCTGGTGGACCCTaGCATGGGCAGGAAGAGGGA +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYIPSGGP*HGQEEG
Trigger: TCCCTCTTCCTGCCCATGGCAGGGTCCACCAGAAGG...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGCCTTATCAAACTCCATaGACTGCTGTGGCTGCGGTG +
Preference number: 4 (lower is better)
Translates to: GQKLGLPEVPILSLIREGPYQTP*TAVAAV
Trigger: CACCGCAGCCACAGCAGTGCATGGAGTTTGATAAGG...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAAGCGGGGCCTCTGTGTaGCTGATGTTACAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKSGASV*LMLQLL
Trigger: CAACAGCTGTAACATCAGGCACACAGAGGCCCCGCT...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGAAAGCACCAGAATCCTaGAGCCGGTCCACAGCTGCG +
Preference number: 4 (lower is better)
Translates to: RAELGQKKSQARNWGYLRKAPES*SRSTAA
Trigger: CGCAGCTGTGGACCGGCTCCAGGATTCTGGTGCTTT...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGTCCCGAGCCACACACTaGAAAGCACCAGAATCCTGG +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLSRATH*KAPESW
Trigger: CCAGGATTCTGGTGCTTTCCAGTGTGTGGCTCGGGA...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAAGTGTGACCTGGGTCTaGGGCTGGATCTCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKSVTWV*GWISAS
Trigger: AGAAGCTGAGATCCAGCCCCAGACCCAGGTCACACT...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCCATCGCAGTGTGACCTaGGTCTGGGGCTGGATCTCA +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVHRSVT*VWGWIS
Trigger: TGAGATCCAGCCCCAGACCCAGGTCACACTGCGATG...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCCAGTGGGCTTGGGTGTaGCCTGTGTCAGACAGTGCA +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVQWAWV*PVSDSA
Trigger: TGCACTGTCTGACACAGGCCACACCCAAGCCCACTG...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGTCAGGGGCCACGTCATaGATCACCAGGGAACCGTTC +
Preference number: 4 (lower is better)
Translates to: RAELGQKKSQARNWGYLRSGATS*ITREPF
Trigger: GAACGGTTCCCTGGTGATCCATGACGTGGCCCCTGA...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTCCACCGACAGCCCGATaGTCTGGATCATCTTGTATG +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVPPTAR*SGSSCM
Trigger: CATACAAGATGATCCAGACCATCGGGCTGTCGGTGG...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGGAAGCCGCACCACGTTaGCATGGTTCAACTTCCCGA +
Preference number: 4 (lower is better)
Translates to: GRAELGQKKSQARNWGYLEAAPR*HGSTSR
Trigger: TCGGGAAGTTGAACCATGCCAACGTGGTGCGGCTTC...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAACCTTCTGTTTGGTGCTaGGGGGCTGTGACTTCAACT +
Preference number: 4 (lower is better)
Translates to: PILSLIREGVAKKDAWSKPSVWC*GAVTST
Trigger: AGTTGAAGTCACAGCCCCTCAGCACCAAACAGAAGG...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGCCGTTCTGGAAGATGTaGATCCTGGGTCCCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RAELGQKKSQARNWGYLRPFWKM*ILGPSL
Trigger: CAAGCTGGGACCCAGGATGCACATCTTCCAGAACGG...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGCAGCACCTCATCATCTaGCTGTCCACCATGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RAELGQKKSQARNWGYLRQHLII*LSTMGH
Trigger: ATGCCCCATGGTGGACAGGCAGATGATGAGGTGCTG...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGGGTGTAGGCAGGCCCTaGGGGGCTGGGCAGGTGACT +
Preference number: 4 (lower is better)
Translates to: GPVCPELSWNFEYICVLKGVGRP*GAGQVT
Trigger: AGTCACCTGCCCAGCCCCCCAGGGCCTGCCTACACC...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGAGCGCTGTGTGGCCCTaGTACACAGTTGTACGCTCA +
Preference number: 4 (lower is better)
Translates to: RAELGQKKSQARNWGYLRSAVWP*YTVVRS
Trigger: TGAGCGTACAACTGTGTACCAGGGCCACACAGCGCT...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGGCACAAAGCGGTTGTTaGACAGGTGCTCCATGCCCA +
Preference number: 4 (lower is better)
Translates to: RAELGQKKSQARNWGYLRAQSGC*TGAPCP
Trigger: TGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGC...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCGGCCTCCTCGTTCCTTaGTACAACAACATCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVGLLVP*YNNILR
Trigger: CCTCAGGATGTTGTTGTAGCAAGGAACGAGGAGGCC...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCACCAGCCAGGTTGCTTaGATGGCAGGTGTAGACACC +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYITSQVA*MAGVDT
Trigger: GGTGTCTACACCTGCCATGCAAGCAACCTGGCTGGT...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCACCCAGCCTGGGTTGCTCGTTGGATGCAATaGAAGTGTAGTTGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RGGKERCLVQSLSHPAWVARWMQ*KCSCQH
Trigger: ATGCTGGCAACTACACTTGCATTGCATCCAACGAGC...AACCCAGGCTGGGTGACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTTGCCCTCTTCCAGCTaGCTGTCTTGGGGCTTCCTA +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYILPSSS*LSWGFL
Trigger: TAGGAAGCCCCAAGACAGCCAGCTGGAAGAGGGCAA...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCGACAGCCCGATGGTCTaGATCATCTTGTATGGGGGA +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVDSPMV*IILYGG
Trigger: TCCCCCATACAAGATGATCCAGACCATCGGGCTGTC...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCCGCACCACGTTGGCATaGTTCAACTTCCCGAACATC +
Preference number: 4 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVRTTLA*FNFPNI
Trigger: GATGTTCGGGAAGTTGAACCATGCCAACGTGGTGCG...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCACCTTCACCTGCCTCTaGGCACTGATCAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYITFTCL*ALIRQL
Trigger: CAACTGCCTGATCAGTGCCCAGAGGCAGGTGAAGGT...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGGAGCCGGTCCACAGCTaGGAAACTCAGGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GPVCPELSWNFEYICVLKEPVHS*ETQAAA
Trigger: GGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTC...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAATTTCATCCTTGTTCTTaGAAATCCTCAGGAACTGTT +
Preference number: 4 (lower is better)
Translates to: SPSPALPRQHWQISGRAEFHPCS*KSSGTV
Trigger: AACAGTTCCTGAGGATTTCCAAGAACAAGGATGAAA...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
3UTR CAA 72 bp CCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTaGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTT +
Preference number: 4 (lower is better)
Translates to: PGNIGRLVAELN*AKRSLRPEIGV
Trigger: AACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCACACCTCCACACTATTaGTGCGCAAGGTCCCATTCT +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYITPPHY*CARSHS
Trigger: AGAATGGGACCTTGCGCATCAATAGTGTGGAGGTGT...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCGAAGGTGATGAAAACTaGCACCGTCAGCTGGACATG +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYIEGDEN*HRQLDM
Trigger: CATGTCCAGCTGACGGTGGCAGTTTTCATCACCTTC...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGTACGCCCTGCGCCTTTaGCAGGAACACCTCCCCGAA +
Preference number: 4 (lower is better)
Translates to: GPVCPELSWNFEYICVLKYALRL*QEHLPE
Trigger: TTCGGGGAGGTGTTCCTGGCAAAGGCGCAGGGCGTA...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCACTGGCAATGGAACATaGCCTCCTCGTTCCTTGCTA +
Preference number: 4 (lower is better)
Translates to: KRPVGPVCPELSWNFEYITGNGT*PPRSLL
Trigger: TAGCAAGGAACGAGGAGGCCATGTTCCATTGCCAGT...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGCGGGGGTGGCTGGGCTaGAAACTGGCAATGGAACAT +
Preference number: 4 (lower is better)
Translates to: GPVCPELSWNFEYICVLKRGWLG*KLAMEH
Trigger: ATGTTCCATTGCCAGTTTTCAGCCCAGCCACCCCCG...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR GCA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGCTGGCTCTCGGGAAATaGATCCTATCACCGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GPVCPELSWNFEYICVLKLALGK*ILSPAL
Trigger: CAGCGCCGGTGATAGGATGCATTTCCCGAGAGCCAG...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CCA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGAGATCACAGTGGGCTTaGGTGTGGCCTGTGTCAGAC +
Preference number: 4 (lower is better)
Translates to: GPVCPELSWNFEYICVLKRSQWA*VWPVSD
Trigger: GTCTGACACAGGCCACACCCAAGCCCACTGTGATCT...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR TCA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGTGGGGCATCTCTCCATaGGTGAACACTTCCCACATG +
Preference number: 4 (lower is better)
Translates to: GPVCPELSWNFEYICVLKWGISP*VNTSHM
Trigger: CATGTGGGAAGTGTTCACTCATGGAGAGATGCCCCA...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp GCTTGCTGTCTGCAGGGCTGTCTCCCAGGGTGCTGGCGATCTCACTaGAGGAGGGCCGGTCCTTGGGGTTCGGGGCCCAGCAGCGCTGCA +
Preference number: 5 (lower is better)
Translates to: ACCLQGCLPGCWRSH*RRAGPWGSGPSSAA
Trigger: TGCAGCGCTGCTGGGCCCCGAACCCCAAGGACCGGCCCTCCTTCAGTGAGATCGCCAGCACCCTGGGAGACAGCCCTGCAGACAGCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp CGCTCCGTGTCCTGGACAGGCACCCCATTGAGCAGCCAGTACACGTaGACCGGGTCCGGAGCCTCCACTTCACAACGGAGCAGCGCCCGG +
Preference number: 5 (lower is better)
Translates to: RSVSWTGTPLSSQYT*TGSGASTSQRSSAR
Trigger: CCGGGCGCTGCTCCGTTGTGAAGTGGAGGCTCCGGACCCGGTGCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCCAGGACACGGAGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp TGCCCTGGGCAAACCGTCGCTCCGTGTCCTGGACAGGCACCCCATTaGGCAGCCAGTACACGTGCACCGGGTCCGGAGCCTCCACTTCAC +
Preference number: 5 (lower is better)
Translates to: CPGQTVAPCPGQAPH*AASTRAPGPEPPLH
Trigger: GTGAAGTGGAGGCTCCGGACCCGGTGCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp GCGAAACTCAGGCTGCTGCCCTGGGCAAACCGTCGCTCCGTGTCCTaGACAGGCACCCCATTGAGCAGCCAGTACACGTGCACCGGGTCC +
Preference number: 5 (lower is better)
Translates to: AKLRLLPWANRRSVS*TGTPLSSQYTCTGS
Trigger: GGACCCGGTGCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp CACCAGAATCCTGGAGCCGGTCCACAGCTGCGAAACTCAGGCTGCTaGCCTGGGCAAACCGTCGCTCCGTGTCCTGGACAGGCACCCCAT +
Preference number: 5 (lower is better)
Translates to: HQNPGAGPQLRNSGC*PGQTVAPCPGQAPH
Trigger: ATGGGGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATTCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp AAGCACCAGAATCCTGGAGCCGGTCCACAGCTGCGAAACTCAGGCTaGTGCCCTGGGCAAACCGTCGCTCCGTGTCCTGGACAGGCACCC +
Preference number: 5 (lower is better)
Translates to: KHQNPGAGPQLRNSG*CPGQTVAPCPGQAP
Trigger: GGGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATTCTGGTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp GAATCCTGGAGCCGGTCCACAGCTGCGAAACTCAGGCTGCTGCCCTaGGCAAACCGTCGCTCCGTGTCCTGGACAGGCACCCCATTGAGC +
Preference number: 5 (lower is better)
Translates to: ESWSRSTAAKLRLLP*ANRRSVSWTGTPLS
Trigger: GCTCAATGGGGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CGCCTGCATTCCGTGGCCGGACTTGGGTCAGCAGCAGAGAGCCATTaGCAAACACCACAGCTCTGCGGAGGTGAGGGGGACGGCTTCGGT +
Preference number: 5 (lower is better)
Translates to: RLHSVAGLGSAAESH*QTPQLCGGEGDGFG
Trigger: ACCGAAGCCGTCCCCCTCACCTCCGCAGAGCTGTGGTGTTTGCCAATGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAATGCAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp GGGTCCGGAGCCTCCACTTCACAACGGAGCAGCGCCCGGCGCCCTTaGAGTGCATCCTGGGAGGACGGCTCCTTGATAAAGACGATAGCG +
Preference number: 5 (lower is better)
Translates to: GSGASTSQRSSARRP*SASWEDGSLIKTIA
Trigger: CGCTATCGTCTTTATCAAGGAGCCGTCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCTGCTCCGTTGTGAAGTGGAGGCTCCGGACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp AATGGGTGGGCCCCTCTGTCCCTGACCGATGCAACGGTAGACGCCTaGATTCCGTGGCCGGACTTGGGTCAGCAGCAGAGAGCCATTGGC +
Preference number: 5 (lower is better)
Translates to: NGWAPLSLTDATVDA*IPWPDLGQQQRAIG
Trigger: GCCAATGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTCTACCGTTGCATCGGTCAGGGACAGAGGGGCCCACCCATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp GAGTGGCTTCCAGGACAATGGGTGGGCCCCTCTGTCCCTGACCGATaGAACGGTAGACGCCTGCATTCCGTGGCCGGACTTGGGTCAGCA +
Preference number: 5 (lower is better)
Translates to: EWLPGQWVGPSVPDR*NGRRLHSVAGLGSA
Trigger: TGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTCTACCGTTGCATCGGTCAGGGACAGAGGGGCCCACCCATTGTCCTGGAAGCCACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp TACCGCTGCGCCCACCGACAGCCCGATGGTCTGGATCATCTTGTATaGGGGAGGGCTGCCTGGGCCCTCCGAGTCTTCCATCACTGGCTT +
Preference number: 5 (lower is better)
Translates to: YRCAHRQPDGLDHLV*GRAAWALRVFHHWL
Trigger: AAGCCAGTGATGGAAGACTCGGAGGGCCCAGGCAGCCCTCCCCCATACAAGATGATCCAGACCATCGGGCTGTCGGTGGGCGCAGCGGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp GGCTCAGCCTCCCGGCACAGCCCCAGAAGCCGCACCACGTTGGCATaGTTCAACTTCCCGAACATCTCCACCTCTCTCCGGAAGTCCAGC +
Preference number: 5 (lower is better)
Translates to: GSASRHSPRSRTTLA*FNFPNISTSLRKSS
Trigger: GCTGGACTTCCGGAGAGAGGTGGAGATGTTCGGGAAGTTGAACCATGCCAACGTGGTGCGGCTTCTGGGGCTGTGCCGGGAGGCTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACCAGCGCCCGGCGCCCTaGAAGTGCATCCTGGGAGGA +
Preference number: 5 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNQRPAP*KCILGG
Trigger: TCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCTG...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp CGGAGCCTCCACTTCACAACGGAGCAGCGCCCGGCGCCCTTGAAGTaGATCCTGGGAGGACGGCTCCTTGATAAAGACGATAGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: RSLHFTTEQRPAPLK*ILGGRLLDKDDSGL
Trigger: CAAGCCGCTATCGTCTTTATCAAGGAGCCGTCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCTGCTCCGTTGTGAAGTGGAGGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp AGCCACACACTGGAAAGCACCAGAATCCTGGAGCCGGTCCACAGCTaGGAAACTCAGGCTGCTGCCCTGGGCAAACCGTCGCTCCGTGTC +
Preference number: 5 (lower is better)
Translates to: SHTLESTRILEPVHS*ETQAAALGKPSLRV
Trigger: GACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATTCTGGTGCTTTCCAGTGTGTGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp GCACCTGGACTCGGGCCTGGGCCTCGATGCTGCCGGCTGGGGTACTaGTCACGCAACGGTACAATGTCCCGTCATACACCTCCACACTAT +
Preference number: 5 (lower is better)
Translates to: APGLGPGPRCCRLGY*SRNGTMSRHTPPHY
Trigger: ATAGTGTGGAGGTGTATGACGGGACATTGTACCGTTGCGTGAGCAGTACCCCAGCCGGCAGCATCGAGGCCCAGGCCCGAGTCCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp TCCACCTCTCTCCGGAAGTCCAGCTGTTGTTGCTCGTCCCTGCTCTaGAGGCTCTTCACGAGGACCAGGGTCTCCGTCGCGCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: STSLRKSSCCCSSLL*RLFTRTRVSVAPSS
Trigger: AGAGGAAGGCGCGACGGAGACCCTGGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAGAGAGGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp AGTGCATCCTGGGAGGACGGCTCCTTGATAAAGACGATAGCGGCTTaGGCACCGGCCAGCAGCGGCAGAAGCAGGGCTCTGAGCAGAGTC +
Preference number: 5 (lower is better)
Translates to: SASWEDGSLIKTIAA*APASSGRSRALSRV
Trigger: GACTCTGCTCAGAGCCCTGCTTCTGCCGCTGCTGGCCGGTGCCCAAGCCGCTATCGTCTTTATCAAGGAGCCGTCCTCCCAGGATGCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp GCCCCTCTGTCCCTGACCGATGCAACGGTAGACGCCTGCATTCCGTaGCCGGACTTGGGTCAGCAGCAGAGAGCCATTGGCAAACACCAC +
Preference number: 5 (lower is better)
Translates to: APLSLTDATVDACIP*PDLGQQQRAIGKHH
Trigger: GTGGTGTTTGCCAATGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTCTACCGTTGCATCGGTCAGGGACAGAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CGGGAAATGCATCCTATCACCGGCGCTGTGGCGCTTGTTGGTGGCTaGGGGGCCAGAGCCCAAGCTGGTCAACGCCACTTCTTCCTGGAT +
Preference number: 5 (lower is better)
Translates to: REMHPITGAVALVGG*GARAQAGQRHFFLD
Trigger: ATCCAGGAAGAAGTGGCGTTGACCAGCTTGGGCTCTGGCCCCCCAGCCACCAACAAGCGCCACAGCGCCGGTGATAGGATGCATTTCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp TCAAGAGGGGTTCTCCCCTGCCCACGCCATCCTGAGGACAGCCTGCAAGGCTCCAGAAGCCGCACCACGTaGGCATGGTTCAACTTCCCG +
Preference number: 5 (lower is better)
Translates to: SRGVLPCPRHPEDSLQGSRSRTT*AWFNFP
Trigger: CGGGAAGTTGAACCATGCCAACGTGGTGCGGCTTCT...GGAGCCTTGCAGGCTGTCCTCAGGATGGCGTGGGCAGGGGAGAACCCCTCTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp GCAGTAGAACATGAGGCCCAGGACCGCGATGATGTAGGCTACCGCTaGGCCCACCGACAGCCCGATGGTCTGGATCATCTTGTATGGGGG +
Preference number: 5 (lower is better)
Translates to: AVEHEAQDRDDVGYR*AHRQPDGLDHLVWG
Trigger: CCCCCATACAAGATGATCCAGACCATCGGGCTGTCGGTGGGCGCAGCGGTAGCCTACATCATCGCGGTCCTGGGCCTCATGTTCTACTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp ACATCTCCACCTCTCTCCGGAAGTCCAGCTGTTGTTGCTCGTCCCTaGTCTGCAGGCTCTTCACGAGGACCAGGGTCTCCGTCGCGCCTT +
Preference number: 5 (lower is better)
Translates to: TSPPLSGSPAVVARP*SAGSSRGPGSPSRL
Trigger: AAGGCGCGACGGAGACCCTGGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAGAGAGGTGGAGATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp TGCCTCTGGGCACTGATCAGGCAGTTGCGAGCCGCTAAGTCCTTGTaGACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCCACC +
Preference number: 5 (lower is better)
Translates to: CLWALIRQLRAAKSL*TKRLLDRCSMPRAT
Trigger: GGTGGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCACAAGGACTTAGCGGCTCGCAACTGCCTGATCAGTGCCCAGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CCAGTGACGTTATCCCGAGCCACACACTGGAAAGCACCAGAATCCTaGAGCCGGTCCACAGCTGCGAAACTCAGGCTGCTGCCCTGGGCA +
Preference number: 5 (lower is better)
Translates to: PVTLSRATHWKAPES*SRSTAAKLRLLPWA
Trigger: TGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATTCTGGTGCTTTCCAGTGTGTGGCTCGGGATAACGTCACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp TTTTTCCAGCACCTGGACTCGGGCCTGGGCCTCGATGCTGCCGGCTaGGGTACTGCTCACGCAACGGTACAATGTCCCGTCATACACCTC +
Preference number: 5 (lower is better)
Translates to: FFQHLDSGLGLDAAG*GTAHATVQCPVIHL
Trigger: GAGGTGTATGACGGGACATTGTACCGTTGCGTGAGCAGTACCCCAGCCGGCAGCATCGAGGCCCAGGCCCGAGTCCAGGTGCTGGAAAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAAATTCCGTGGCCGGACTaGGGTCAGCAGCAGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SPSPALPRQHWQISGRAEIPWPD*GQQQRA
Trigger: GGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAAT...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp CGTCAGCTGGACATGAGCGCGGATCTGGCCCTGTGGCTCGTTGGATaGAATGCAAGTGTAGTTGCCAGCATCATCTCGGGTCACTCGGGC +
Preference number: 5 (lower is better)
Translates to: RQLDMSADLALWLVG*NASVVASIISGHSG
Trigger: GCCCGAGTGACCCGAGATGATGCTGGCAACTACACTTGCATTGCATCCAACGAGCCACAGGGCCAGATCCGCGCTCATGTCCAGCTGACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp GCATGTCTTCAATCTCTGCCAGGTGGAGAGTGGCTTCCAGGACAATaGGTGGGCCCCTCTGTCCCTGACCGATGCAACGGTAGACGCCTG +
Preference number: 5 (lower is better)
Translates to: ACLQSLPGGEWLPGQ*VGPSVPDRCNGRRL
Trigger: CAGGCGTCTACCGTTGCATCGGTCAGGGACAGAGGGGCCCACCCATTGTCCTGGAAGCCACTCTCCACCTGGCAGAGATTGAAGACATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTAGAAGTCCAGCTGTTGTaGCTCGTCCCTGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLEVQLL*LVPALQ
Trigger: CTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTC...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp AACTTCCCGAACATCTCCACCTCTCTCCGGAAGTCCAGCTGTTGTTaGTCGTCCCTGCTCTGCAGGCTCTTCACGAGGACCAGGGTCTCC +
Preference number: 5 (lower is better)
Translates to: NFPNISTSLRKSSCC*SSLLCRLFTRTRVS
Trigger: GGAGACCCTGGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAGAGAGGTGGAGATGTTCGGGAAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp ATGGTGACAAACACAAGCTCAAGGCCCTTCTGGTGGACCCTGCCATaGGCAGGAAGAGGGACTCCAGCATGCTCCCACCAGACACTGGGT +
Preference number: 5 (lower is better)
Translates to: MVTNTSSRPFWWTLP*AGRGTPACSHQTLG
Trigger: ACCCAGTGTCTGGTGGGAGCATGCTGGAGTCCCTCTTCCTGCCCATGGCAGGGTCCACCAGAAGGGCCTTGAGCTTGTGTTTGTCACCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CGTAGCCTCCTTATCAAACTCCATGCACTGCTGTGGCTGCGGTGGTaGCGTGAACTTGAGTTTTTCCAGCACCTGGACTCGGGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RSLLIKLHALLWLRW*RELEFFQHLDSGLG
Trigger: GCCCAGGCCCGAGTCCAGGTGCTGGAAAAACTCAAGTTCACGCCACCACCGCAGCCACAGCAGTGCATGGAGTTTGATAAGGAGGCTACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CCACCGTCAGCTGGACATGAGCGCGGATCTGGCCCTGTGGCTCGTTaGATGCAATGCAAGTGTAGTTGCCAGCATCATCTCGGGTCACTC +
Preference number: 5 (lower is better)
Translates to: PPSAGHERGSGPVAR*MQCKCSCQHHLGSL
Trigger: GAGTGACCCGAGATGATGCTGGCAACTACACTTGCATTGCATCCAACGAGCCACAGGGCCAGATCCGCGCTCATGTCCAGCTGACGGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACAGATCACAGTGGGCTaGGGTGTGGCCTGTGTCAGA +
Preference number: 5 (lower is better)
Translates to: SPSPALPRQHWQISGRAEQITVG*GVACVR
Trigger: TCTGACACAGGCCACACCCAAGCCCACTGTGATCTG...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp AGCCCCAGTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAATGCACAAAGCGGTTGTaGGACAGGTGCTCCATGCCC +
Preference number: 5 (lower is better)
Translates to: SPSPALPRQHWQISGRAECTKRL*DRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCA...TTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGACTGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp AGTCTCGTCCTCAAAGACCCACTGCAGGCTCGGGGGTGGCTGGGCTaGAAACTGGCAATGGAACATGGCCTCCTCGTTCCTTGCTACAAC +
Preference number: 5 (lower is better)
Translates to: SLVLKDPLQARGWLG*KLAMEHGLLVPCYN
Trigger: GTTGTAGCAAGGAACGAGGAGGCCATGTTCCATTGCCAGTTTTCAGCCCAGCCACCCCCGAGCCTGCAGTGGGTCTTTGAGGACGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp CCCAAGCTGGTCAACGCCACTTCTTCCTGGATCTCGGCTGATGGCTaGCCATTCTGCAAAGGCCCACCATTGAGGCACTCCATCTCTGGC +
Preference number: 5 (lower is better)
Translates to: PKLVNATSSWISADG*PFCKGPPLRHSISG
Trigger: GCCAGAGATGGAGTGCCTCAATGGTGGGCCTTTGCAGAATGGTCAGCCATCAGCCGAGATCCAGGAAGAAGTGGCGTTGACCAGCTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp GCCAGAGCCCAAGCTGGTCAACGCCACTTCTTCCTGGATCTCGGCTaGTGGCTGACCATTCTGCAAAGGCCCACCATTGAGGCACTCCAT +
Preference number: 5 (lower is better)
Translates to: ARAQAGQRHFFLDLG*WLTILQRPTIEALH
Trigger: ATGGAGTGCCTCAATGGTGGGCCTTTGCAGAATGGTCAGCCATCAGCCGAGATCCAGGAAGAAGTGGCGTTGACCAGCTTGGGCTCTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp GTGGCTGAGCAGGGCACCGTAGCCTCCTTATCAAACTCCATGCACTaGTGTGGCTGCGGTGGTGGCGTGAACTTGAGTTTTTCCAGCACC +
Preference number: 5 (lower is better)
Translates to: VAEQGTVASLSNSMH*CGCGGGVNLSFSST
Trigger: GGTGCTGGAAAAACTCAAGTTCACGCCACCACCGCAGCCACAGCAGTGCATGGAGTTTGATAAGGAGGCTACGGTGCCCTGCTCAGCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp CGCGGATCTGGCCCTGTGGCTCGTTGGATGCAATGCAAGTGTAGTTaGCAGCATCATCTCGGGTCACTCGGGCAAAGTGTAGGGTTCCAG +
Preference number: 5 (lower is better)
Translates to: RGSGPVARWMQCKCS*QHHLGSLGQSVGFQ
Trigger: CTGGAACCCTACACTTTGCCCGAGTGACCCGAGATGATGCTGGCAACTACACTTGCATTGCATCCAACGAGCCACAGGGCCAGATCCGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp GCTGGACATGAGCGCGGATCTGGCCCTGTGGCTCGTTGGATGCAATaGAAGTGTAGTTGCCAGCATCATCTCGGGTCACTCGGGCAAAGT +
Preference number: 5 (lower is better)
Translates to: AGHERGSGPVARWMQ*KCSCQHHLGSLGQS
Trigger: ACTTTGCCCGAGTGACCCGAGATGATGCTGGCAACTACACTTGCATTGCATCCAACGAGCCACAGGGCCAGATCCGCGCTCATGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp CTGTTGTATACATCCTTGCTCAGGCCCAGTGCGGACACCTTCACCTaGCTCTGGGCACTGATCAGGCAGTTGCGAGCCGCTAAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLYTSLLRPSADTFT*LWALIRQLRAAKSL
Trigger: CAAGGACTTAGCGGCTCGCAACTGCCTGATCAGTGCCCAGAGGCAGGTGAAGGTGTCCGCACTGGGCCTGAGCAAGGATGTATACAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp GTACTGCGGACTTCCTCTCCAGTGACGTTATCCCGAGCCACACACTaGAAAGCACCAGAATCCTGGAGCCGGTCCACAGCTGCGAAACTC +
Preference number: 5 (lower is better)
Translates to: VLRTSSPVTLSRATH*KAPESWSRSTAAKL
Trigger: GAGTTTCGCAGCTGTGGACCGGCTCCAGGATTCTGGTGCTTTCCAGTGTGTGGCTCGGGATAACGTCACTGGAGAGGAAGTCCGCAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp ACTGCAGGCTCGGGGGTGGCTGGGCTGAAAACTGGCAATGGAACATaGCCTCCTCGTTCCTTGCTACAACAACATCCTGAGGTGCCAGCA +
Preference number: 5 (lower is better)
Translates to: TAGSGVAGLKTGNGT*PPRSLLQQHPEVPA
Trigger: TGCTGGCACCTCAGGATGTTGTTGTAGCAAGGAACGAGGAGGCCATGTTCCATTGCCAGTTTTCAGCCCAGCCACCCCCGAGCCTGCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CCAGACATCAGACTTAGTGGAGAAGTCACCCTCCAGGACAGCCTCTaGAGACATCCAACGCAGAGGTACCCAGGCCTGGCGGAAGTGGTA +
Preference number: 5 (lower is better)
Translates to: PDIRLSGEVTLQDSL*RHPTQRYPGLAEVV
Trigger: TACCACTTCCGCCAGGCCTGGGTACCTCTGCGTTGGATGTCTCCAGAGGCTGTCCTGGAGGGTGACTTCTCCACTAAGTCTGATGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCTTCCAGCTGGCTGTCTaGGGGCTTCCTAAGCCATGT +
Preference number: 5 (lower is better)
Translates to: VQPSPGNIGRLVAELNLAFQLAV*GLPKPC
Trigger: ACATGGCTTAGGAAGCCCCAAGACAGCCAGCTGGAA...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACCGAGCCGCTAAGTCCTaGTGCACAAAGCGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNRAAKS*CTKRLL
Trigger: CAACAACCGCTTTGTGCACAAGGACTTAGCGGCTCG...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CCTCTGAGATCAGCATCTGGTTCCTGTACCAGATCACAGTGGGCTTaGGTGTGGCCTGTGTCAGACAGTGCAAGTAGCCAGGCTTGCCCT +
Preference number: 5 (lower is better)
Translates to: PLRSASGSCTRSQWA*VWPVSDSASSQACP
Trigger: AGGGCAAGCCTGGCTACTTGCACTGTCTGACACAGGCCACACCCAAGCCCACTGTGATCTGGTACAGGAACCAGATGCTGATCTCAGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GGCTTAGTGTGCACAAGCCCACGGTGGGGAGGACTCCACTGCTGTGACCTCCTATACACCTCCACACTATaGATGCGCAAGGTCCCATTC +
Preference number: 5 (lower is better)
Translates to: GLVCTSPRWGGLHCCDLLYTSTL*MRKVPF
Trigger: GAATGGGACCTTGCGCATCAATAGTGTGGAGGTGTA...TAGGAGGTCACAGCAGTGGAGTCCTCCCCACCGTGGGCTTGTGCACACTAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GGCCAGAAATTGGGGTTACCTGAGGTACCCATACTGTCCCTGATAAGGGAAGGGCCGGAAGTCCAGCTGTaGTTGCTCGTCCCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: GQKLGLPEVPILSLIREGPEVQL*LLVPAL
Trigger: CAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGG...CCCTTCCCTTATCAGGGACAGTATGGGTACCTCAGGTAACCCCAATTTCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp TGCTTGCATGGCAGGTGTAGACACCAGTATCACTCTCAGCGATGGTaGCAAACACAAGCTCAAGGCCCTTCTGGTGGACCCTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: CLHGRCRHQYHSQRW*QTQAQGPSGGPCHG
Trigger: CCCATGGCAGGGTCCACCAGAAGGGCCTTGAGCTTGTGTTTGTCACCATCGCTGAGAGTGATACTGGTGTCTACACCTGCCATGCAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp AGTGTGACCTGGGTCTGGGGCTGGATCTCAGCTTCTGAGGCTGGGTaGTTCAGGACCACAGGACCTGCTTCGATCCATTTGATGTTGAAG +
Preference number: 5 (lower is better)
Translates to: SVTWVWGWISASEAG*FRTTGPASIHLMLK
Trigger: CTTCAACATCAAATGGATCGAAGCAGGTCCTGTGGTCCTGAAGCACCCAGCCTCAGAAGCTGAGATCCAGCCCCAGACCCAGGTCACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp GAAGTGGTAGTACTCACTGTTGTATACATCCTTGCTCAGGCCCAGTaGGGACACCTTCACCTGCCTCTGGGCACTGATCAGGCAGTTGCG +
Preference number: 5 (lower is better)
Translates to: EVVVLTVVYILAQAQ*GHLHLPLGTDQAVA
Trigger: CGCAACTGCCTGATCAGTGCCCAGAGGCAGGTGAAGGTGTCCGCACTGGGCCTGAGCAAGGATGTATACAACAGTGAGTACTACCACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp GGCTGGGCAGGTGACTCGTTCCTCATCACCAGCTATGAACACCCGTaGTTCAAACGGCAGCATGTCTTCAATCTCTGCCAGGTGGAGAGT +
Preference number: 5 (lower is better)
Translates to: GWAGDSFLITSYEHP*FKRQHVFNLCQVES
Trigger: ACTCTCCACCTGGCAGAGATTGAAGACATGCTGCCGTTTGAACCACGGGTGTTCATAGCTGGTGATGAGGAACGAGTCACCTGCCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp AGATCAGCATCTGGTTCCTGTACCAGATCACAGTGGGCTTGGGTGTaGCCTGTGTCAGACAGTGCAAGTAGCCAGGCTTGCCCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: RSASGSCTRSQWAWV*PVSDSASSQACPLP
Trigger: TGGAAGAGGGCAAGCCTGGCTACTTGCACTGTCTGACACAGGCCACACCCAAGCCCACTGTGATCTGGTACAGGAACCAGATGCTGATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp TCGAGTCCTCTGAGATCAGCATCTGGTTCCTGTACCAGATCACAGTaGGCTTGGGTGTGGCCTGTGTCAGACAGTGCAAGTAGCCAGGCT +
Preference number: 5 (lower is better)
Translates to: SSPLRSASGSCTRSQ*AWVWPVSDSASSQA
Trigger: AGCCTGGCTACTTGCACTGTCTGACACAGGCCACACCCAAGCCCACTGTGATCTGGTACAGGAACCAGATGCTGATCTCAGAGGACTCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GACCTGTGGGCCAAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACCGCTCAGGTTCCACTTaGAAGGTGATGAAAACTGCC +
Preference number: 5 (lower is better)
Translates to: DLWAKRPVGPVCPELSWNRSGST*KVMKTA
Trigger: GGCAGTTTTCATCACCTTCAAAGTGGAACCTGAGCG...GTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTTGGCCCACAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGCGGGAGTCGAGCCTaGCCAGCCTGCAAGTCTGCC +
Preference number: 5 (lower is better)
Translates to: KRPVGPVCPELSWNFEYICGSRA*PACKSA
Trigger: GGCAGACTTGCAGGCTGGCAAGGCTCGACTCCCGCA...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 90 bp CACTGTGATATTGACATCCTGTCGCCGCTGACCAGCCAGGTTGCTTaGATGGCAGGTGTAGACACCAGTATCACTCTCAGCGATGGTGAC +
Preference number: 5 (lower is better)
Translates to: HCDIDILSPLTSQVA*MAGVDTSITLSDGD
Trigger: GTCACCATCGCTGAGAGTGATACTGGTGTCTACACCTGCCATGCAAGCAACCTGGCTGGTCAGCGGCGACAGGATGTCAATATCACAGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp AGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGAGGAGGGCCACCTTCTGTTaGGTGCTGAGGGGCTGTGAC +
Preference number: 5 (lower is better)
Translates to: RAELGQKKSQARNWGYLRRATFC*VLRGCD
Trigger: GTCACAGCCCCTCAGCACCAAACAGAAGGTGGCCCT...CCTCAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp TGGCAATGGAACATGGCCTCCTCGTTCCTTGCTACAACAACATCCTaGGGTGCCAGCACCACCCTGGCAAAGCTTTCATCTGCAACACTC +
Preference number: 5 (lower is better)
Translates to: WQWNMASSFLATTTS*GASTTLAKLSSATL
Trigger: GAGTGTTGCAGATGAAAGCTTTGCCAGGGTGGTGCTGGCACCTCAGGATGTTGTTGTAGCAAGGAACGAGGAGGCCATGTTCCATTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 90 bp CCATTCTTCGAAACTTCGAACCTCGAGTCCTCTGAGATCAGCATCTaGTTCCTGTACCAGATCACAGTGGGCTTGGGTGTGGCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: PFFETSNLESSEISI*FLYQITVGLGVACV
Trigger: GACACAGGCCACACCCAAGCCCACTGTGATCTGGTACAGGAACCAGATGCTGATCTCAGAGGACTCGAGGTTCGAAGTTTCGAAGAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCGACCAGCCAGGTTGCTaGCATGGCAGGTGTAGACAC +
Preference number: 5 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVDQPGC*HGRCRH
Trigger: GTGTCTACACCTGCCATGCAAGCAACCTGGCTGGTC...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGGCCCTGGTACACAGTaGTACGCTCAGGTTCCACTT +
Preference number: 5 (lower is better)
Translates to: PILSLIREGVAKKDAWSKGPGTQ*YAQVPL
Trigger: AAGTGGAACCTGAGCGTACAACTGTGTACCAGGGCC...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp TCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAAGTCTTAGTCAGCAGCAGAGAGCCATaGGCAAACACCACAGCTCTG +
Preference number: 5 (lower is better)
Translates to: SLIREGVAKKDAWSKVLVSSREP*ANTTAL
Trigger: CAGAGCTGTGGTGTTTGCCAATGGCTCTCTGCTGCT...GACTAAGACTTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAATGTAGGGTTCCAGCATaGTCTGTCACCCATTCAGGG +
Preference number: 5 (lower is better)
Translates to: PILSLIREGVAKKDAWSKCRVPA*SVTHSG
Trigger: CCCTGAATGGGTGACAGACAATGCTGGAACCCTACA...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp CCCATACTGTCCCTGATAAGGGAAGGGGTGGCAAAGAAAGATGCCTGGTCCAAATTGTGCACAAAGCGGTaGTTGGACAGGTGCTCCATG +
Preference number: 5 (lower is better)
Translates to: PILSLIREGVAKKDAWSKLCTKR*LDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCACAA...TTTGGACCAGGCATCTTTCTTTGCCACCCCTTCCCTTATCAGGGACAGTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp TGCTCACGCAACGGTACAATGTCCCGTCATACACCTCCACACTATTaGTGCGCAAGGTCCCATTCTTCGAAACTTCGAACCTCGAGTCCT +
Preference number: 5 (lower is better)
Translates to: CSRNGTMSRHTPPHY*CARSHSSKLRTSSP
Trigger: AGGACTCGAGGTTCGAAGTTTCGAAGAATGGGACCTTGCGCATCAATAGTGTGGAGGTGTATGACGGGACATTGTACCGTTGCGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 90 bp CACCTGGGAACACAGGGCCACCTTCTGTTTGGTGCTGAGGGGCTGTaGCTTCAACTTTTCATCCTTGTTCTTGGAAATCCTCAGGAACTG +
Preference number: 5 (lower is better)
Translates to: HLGTQGHLLFGAEGL*LQLFILVLGNPQEL
Trigger: CAGTTCCTGAGGATTTCCAAGAACAAGGATGAAAAGTTGAAGTCACAGCCCCTCAGCACCAAACAGAAGGTGGCCCTGTGTTCCCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGCTACGCCCTGCGCCTTaGCCAGGAACACCTCCCCGA +
Preference number: 5 (lower is better)
Translates to: GPVCPELSWNFEYICVLKLRPAP*PGTPPR
Trigger: TCGGGGAGGTGTTCCTGGCAAAGGCGCAGGGCGTAG...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GGCAGAGCTGAACTTGGCCAAAAGAAGTCTCAGGCCAGAAATTGGGGTTACCTGATCCTCAGGAACTGTTaGAGATCTCCCAGGTCCACA +
Preference number: 5 (lower is better)
Translates to: GRAELGQKKSQARNWGYLILRNC*RSPRST
Trigger: TGTGGACCTGGGAGATCTCAAACAGTTCCTGAGGAT...CAGGTAACCCCAATTTCTGGCCTGAGACTTCTTTTGGCCAAGTTCAGCTCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GTCCAGCCCTCCCCAGGCAACATTGGCAGATTAGTGGCAGAGCTGAACTTGGCCTTTTCATCCTTGTTCTaGGAAATCCTCAGGAACTGT +
Preference number: 5 (lower is better)
Translates to: VQPSPGNIGRLVAELNLAFSSLF*EILRNC
Trigger: ACAGTTCCTGAGGATTTCCAAGAACAAGGATGAAAA...GGCCAAGTTCAGCTCTGCCACTAATCTGCCAATGTTGCCTGGGGAGGGCTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGATCCTGGGTCCCAGCTaGGTAGGGTCCAGGATCCGG +
Preference number: 5 (lower is better)
Translates to: GPVCPELSWNFEYICVLKILGPS*VGSRIR
Trigger: CCGGATCCTGGACCCTACCAAGCTGGGACCCAGGAT...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTTTCTGCAGCCGCTaGGCTTTACACCGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: KRPVGPVCPELSWNFEYICFCSR*ALHRFL
Trigger: CAAGAAGCGGTGTAAAGCCAAGCGGCTGCAGAAACA...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp GGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTGTGTATTAAAGTGGGAGGACGGCTCCTaGATAAAGACGATAGCGGCT +
Preference number: 5 (lower is better)
Translates to: GPVCPELSWNFEYICVLKWEDGS*IKTIAA
Trigger: AGCCGCTATCGTCTTTATCAAGGAGCCGTCCTCCCA...CTTTAATACACAGATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS-3UTR CAA 90 bp AAGAGGCCCGTTGGTCCTGTGTGCCCAGAGTTATCTTGGAACTTTGAGTATATCTTCAACTTTTCATCCTaGTTCTTGGAAATCCTCAGG +
Preference number: 5 (lower is better)
Translates to: KRPVGPVCPELSWNFEYIFNFSS*FLEILR
Trigger: CCTGAGGATTTCCAAGAACAAGGATGAAAAGTTGAA...GATATACTCAAAGTTCCAAGATAACTCTGGGCACACAGGACCAACGGGCCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp AGCCGGTCCACAGCTGCGAAACTCAGGCTGCTGCCCTaGGCAAACCGTCGCTCCGTGTCCTGGACAGGCACC +
Preference number: 6 (lower is better)
Translates to: SRSTAAKLRLLP*ANRRSVSWTGT
Trigger: GGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp GCTGCGCCCACCGACAGCCCGATGGTCTGGATCATCTaGTATGGGGGAGGGCTGCCTGGGCCCTCCGAGTCT +
Preference number: 6 (lower is better)
Translates to: AAPTDSPMVWII*YGGGLPGPSES
Trigger: AGACTCGGAGGGCCCAGGCAGCCCTCCCCCATACAAGATGATCCAGACCATCGGGCTGTCGGTGGGCGCAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp CTGCCCTGGGCAAACCGTCGCTCCGTGTCCTGGACAGGCACCCCATaGAGCAGCCAGTACACGTGCACCGGGTCCGGAGCCTCCACTTCA +
Preference number: 6 (lower is better)
Translates to: LPWANRRSVSWTGTP*SSQYTCTGSGASTS
Trigger: TGAAGTGGAGGCTCCGGACCCGGTGCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp CAAACCGTCGCTCCGTGTCCTGGACAGGCACCCCATTaGGCAGCCAGTACACGTGCACCGGGTCCGGAGCCT +
Preference number: 6 (lower is better)
Translates to: QTVAPCPGQAPH*AASTRAPGPEP
Trigger: AGGCTCCGGACCCGGTGCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCCAGGACACGGAGCGACGGTTTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp AGGACCAGGGTCTCCGTCGCGCCTTCCTCTACGCCCTaGGCCTTTGCCAGGAACACCTCCCCGAACTCGCTT +
Preference number: 6 (lower is better)
Translates to: RTRVSVAPSSTP*AFARNTSPNSL
Trigger: AAGCGAGTTCGGGGAGGTGTTCCTGGCAAAGGCGCAGGGCGTAGAGGAAGGCGCGACGGAGACCCTGGTCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp AGGCTGCTGCCCTGGGCAAACCGTCGCTCCGTGTCCTaGACAGGCACCCCATTGAGCAGCCAGTACACGTGC +
Preference number: 6 (lower is better)
Translates to: RLLPWANRRSVS*TGTPLSSQYTC
Trigger: GCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCCAGGACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp GGGCTGCCTGGGCCCTCCGAGTCTTCCATCACTGGCTaGTCCACGACTAAGAGCGGGGCCTCTGTGTGCCTG +
Preference number: 6 (lower is better)
Translates to: GLPGPSESSITG*STTKSGASVCL
Trigger: CAGGCACACAGAGGCCCCGCTCTTAGTCGTGGACAAGCCAGTGATGGAAGACTCGGAGGGCCCAGGCAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp TCCTGGACAGGCACCCCATTGAGCAGCCAGTACACGTaGACCGGGTCCGGAGCCTCCACTTCACAACGGAGC +
Preference number: 6 (lower is better)
Translates to: SWTGTPLSSQYT*TGSGASTSQRS
Trigger: GCTCCGTTGTGAAGTGGAGGCTCCGGACCCGGTGCACGTGTACTGGCTGCTCAATGGGGTGCCTGTCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp AATCCTGGAGCCGGTCCACAGCTGCGAAACTCAGGCTaGTGCCCTGGGCAAACCGTCGCTCCGTGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: NPGAGPQLRNSG*CPGQTVAPCPG
Trigger: TCCAGGACACGGAGCGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GCCCCTCTGTCCCTGACCGATGCAACGGTAGACGCCTaGATTCCGTGGCCGGACTTGGGTCAGCAGCAGAGA +
Preference number: 6 (lower is better)
Translates to: APLSLTDATVDA*IPWPDLGQQQR
Trigger: TCTCTGCTGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTCTACCGTTGCATCGGTCAGGGACAGAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CTCGGGCCTGGGCCTCGATGCTGCCGGCTGGGGTACTaGTCACGCAACGGTACAATGTCCCGTCATACACCT +
Preference number: 6 (lower is better)
Translates to: LGPGPRCCRLGY*SRNGTMSRHTP
Trigger: AGGTGTATGACGGGACATTGTACCGTTGCGTGAGCAGTACCCCAGCCGGCAGCATCGAGGCCCAGGCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp TTTCCAGCACCTGGACTCGGGCCTGGGCCTCGATGCTaGCGGCTGGGGTACTGCTCACGCAACGGTACAATG +
Preference number: 6 (lower is better)
Translates to: FPAPGLGPGPRC*RLGYCSRNGTM
Trigger: CATTGTACCGTTGCGTGAGCAGTACCCCAGCCGGCAGCATCGAGGCCCAGGCCCGAGTCCAGGTGCTGGAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GTTTTTCCAGCACCTGGACTCGGGCCTGGGCCTCGATaGTGCCGGCTGGGGTACTGCTCACGCAACGGTACA +
Preference number: 6 (lower is better)
Translates to: VFPAPGLGPGPR*CRLGYCSRNGT
Trigger: TGTACCGTTGCGTGAGCAGTACCCCAGCCGGCAGCATCGAGGCCCAGGCCCGAGTCCAGGTGCTGGAAAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CTCCGGAAGTCCAGCTGTTGTTGCTCGTCCCTGCTCTaGAGGCTCTTCACGAGGACCAGGGTCTCCGTCGCG +
Preference number: 6 (lower is better)
Translates to: LRKSSCCCSSLL*RLFTRTRVSVA
Trigger: CGCGACGGAGACCCTGGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp TGGGAGGACGGCTCCTTGATAAAGACGATAGCGGCTTaGGCACCGGCCAGCAGCGGCAGAAGCAGGGCTCTG +
Preference number: 6 (lower is better)
Translates to: WEDGSLIKTIAA*APASSGRSRAL
Trigger: CAGAGCCCTGCTTCTGCCGCTGCTGGCCGGTGCCCAAGCCGCTATCGTCTTTATCAAGGAGCCGTCCTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp TCCGTGGCCGGACTTGGGTCAGCAGCAGAGAGCCATTaGCAAACACCACAGCTCTGCGGAGGTGAGGGGGAC +
Preference number: 6 (lower is better)
Translates to: SVAGLGSAAESH*QTPQLCGGEGD
Trigger: GTCCCCCTCACCTCCGCAGAGCTGTGGTGTTTGCCAATGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp GCCCACCGACAGCCCGATGGTCTGGATCATCTTGTATaGGGGAGGGCTGCCTGGGCCCTCCGAGTCTTCCAT +
Preference number: 6 (lower is better)
Translates to: AHRQPDGLDHLV*GRAAWALRVFH
Trigger: ATGGAAGACTCGGAGGGCCCAGGCAGCCCTCCCCCATACAAGATGATCCAGACCATCGGGCTGTCGGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp CTGGGAGGACGGCTCCTTGATAAAGACGATAGCGGCTaGGGCACCGGCCAGCAGCGGCAGAAGCAGGGCTCT +
Preference number: 6 (lower is better)
Translates to: LGGRLLDKDDSG*GTGQQRQKQGS
Trigger: AGAGCCCTGCTTCTGCCGCTGCTGGCCGGTGCCCAAGCCGCTATCGTCTTTATCAAGGAGCCGTCCTCCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp CGGGTCCGGAGCCTCCACTTCACAACGGAGCAGCGCCCGGCGCCCTaGAAGTGCATCCTGGGAGGACGGCTCCTTGATAAAGACGATAGC +
Preference number: 6 (lower is better)
Translates to: RVRSLHFTTEQRPAP*KCILGGRLLDKDDS
Trigger: GCTATCGTCTTTATCAAGGAGCCGTCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCTGCTCCGTTGTGAAGTGGAGGCTCCGGACCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp GCCTCCACTTCACAACGGAGCAGCGCCCGGCGCCCTTaGAGTGCATCCTGGGAGGACGGCTCCTTGATAAAG +
Preference number: 6 (lower is better)
Translates to: ASTSQRSSARRP*SASWEDGSLIK
Trigger: CTTTATCAAGGAGCCGTCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCTGCTCCGTTGTGAAGTGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CTGGAAAGCACCAGAATCCTGGAGCCGGTCCACAGCTaGGAAACTCAGGCTGCTGCCCTGGGCAAACCGTCG +
Preference number: 6 (lower is better)
Translates to: LESTRILEPVHS*ETQAAALGKPS
Trigger: CGACGGTTTGCCCAGGGCAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATTCTGGTGCTTTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CATGAGGCCCAGGACCGCGATGATGTAGGCTACCGCTaGGCCCACCGACAGCCCGATGGTCTGGATCATCTT +
Preference number: 6 (lower is better)
Translates to: HEAQDRDDVGYR*AHRQPDGLDHL
Trigger: AAGATGATCCAGACCATCGGGCTGTCGGTGGGCGCAGCGGTAGCCTACATCATCGCGGTCCTGGGCCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CCTCTCTCCGGAAGTCCAGCTGTTGTTGCTCGTCCCTaGTCTGCAGGCTCTTCACGAGGACCAGGGTCTCCG +
Preference number: 6 (lower is better)
Translates to: PLSGSPAVVARP*SAGSSRGPGSP
Trigger: CGGAGACCCTGGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAGAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp TCCCTGACCGATGCAACGGTAGACGCCTGCATTCCGTaGCCGGACTTGGGTCAGCAGCAGAGAGCCATTGGC +
Preference number: 6 (lower is better)
Translates to: SLTDATVDACIP*PDLGQQQRAIG
Trigger: GCCAATGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTCTACCGTTGCATCGGTCAGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp AAGTGCATCCTGGGAGGACGGCTCCTTGATAAAGACGATAGCGGCTaGGGCACCGGCCAGCAGCGGCAGAAGCAGGGCTCTGAGCAGAGT +
Preference number: 6 (lower is better)
Translates to: KCILGGRLLDKDDSG*GTGQQRQKQGSEQS
Trigger: ACTCTGCTCAGAGCCCTGCTTCTGCCGCTGCTGGCCGGTGCCCAAGCCGCTATCGTCTTTATCAAGGAGCCGTCCTCCCAGGATGCACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp TCCCTGACCGATGCAACGGTAGACGCCTGCATTCCGTGGCCGGACTaGGGTCAGCAGCAGAGAGCCATTGGCAAACACCACAGCTCTGCG +
Preference number: 6 (lower is better)
Translates to: SLTDATVDACIPWPD*GQQQRAIGKHHSSA
Trigger: CGCAGAGCTGTGGTGTTTGCCAATGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTCTACCGTTGCATCGGTCAGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp TATGGGGGAGGGCTGCCTGGGCCCTCCGAGTCTTCCATCACTGGCTaGTCCACGACTAAGAGCGGGGCCTCTGTGTGCCTGATGTTACAG +
Preference number: 6 (lower is better)
Translates to: YGGGLPGPSESSITG*STTKSGASVCLMLQ
Trigger: CTGTAACATCAGGCACACAGAGGCCCCGCTCTTAGTCGTGGACAAGCCAGTGATGGAAGACTCGGAGGGCCCAGGCAGCCCTCCCCCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp ACCTGCCTCTGGGCACTGATCAGGCAGTTGCGAGCCGCTAAGTCCTaGTGCACAAAGCGGTTGTTGGACAGGTGCTCCATGCCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: TCLWALIRQLRAAKS*CTKRLLDRCSMPRA
Trigger: GGCCCTGGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCACAAGGACTTAGCGGCTCGCAACTGCCTGATCAGTGCCCAGAGGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp AGCCTCCACTTCACAACGGAGCAGCGCCCGGCGCCCTaGAAGTGCATCCTGGGAGGACGGCTCCTTGATAAA +
Preference number: 6 (lower is better)
Translates to: SLHFTTEQRPAP*KCILGGRLLDK
Trigger: TTTATCAAGGAGCCGTCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCTGCTCCGTTGTGAAGTGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp TCAGCCTCCCGGCACAGCCCCAGAAGCCGCACCACGTaGGCATGGTTCAACTTCCCGAACATCTCCACCTCT +
Preference number: 6 (lower is better)
Translates to: SASRHSPRSRTT*AWFNFPNISTS
Trigger: AGAGGTGGAGATGTTCGGGAAGTTGAACCATGCCAACGTGGTGCGGCTTCTGGGGCTGTGCCGGGAGGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp CCCAGTGCGGACACCTTCACCTGCCTCTGGGCACTGATCAGGCAGTaGCGAGCCGCTAAGTCCTTGTGCACAAAGCGGTTGTTGGACAGG +
Preference number: 6 (lower is better)
Translates to: PSADTFTCLWALIRQ*RAAKSLCTKRLLDR
Trigger: CCTGTCCAACAACCGCTTTGTGCACAAGGACTTAGCGGCTCGCAACTGCCTGATCAGTGCCCAGAGGCAGGTGAAGGTGTCCGCACTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp CTCAAAGACCCACTGCAGGCTCGGGGGTGGCTGGGCTaGAAACTGGCAATGGAACATGGCCTCCTCGTTCCT +
Preference number: 6 (lower is better)
Translates to: LKDPLQARGWLG*KLAMEHGLLVP
Trigger: AGGAACGAGGAGGCCATGTTCCATTGCCAGTTTTCAGCCCAGCCACCCCCGAGCCTGCAGTGGGTCTTTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CACTTCACAACGGAGCAGCGCCCGGCGCCCTTGAAGTaGATCCTGGGAGGACGGCTCCTTGATAAAGACGAT +
Preference number: 6 (lower is better)
Translates to: HFTTEQRPAPLK*ILGGRLLDKDD
Trigger: ATCGTCTTTATCAAGGAGCCGTCCTCCCAGGATGCACTTCAAGGGCGCCGGGCGCTGCTCCGTTGTGAAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CGGTTAGTGATGGGAGTCTCGTCCTCAAAGACCCACTaGAGGCTCGGGGGTGGCTGGGCTGAAAACTGGCAA +
Preference number: 6 (lower is better)
Translates to: RLVMGVSSSKTH*RLGGGWAENWQ
Trigger: TTGCCAGTTTTCAGCCCAGCCACCCCCGAGCCTGCAGTGGGTCTTTGAGGACGAGACTCCCATCACTAACCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp AGAGTGGTGATAGGCTGCAGGCTGGCTCTCGGGAAATaGATCCTATCACCGGCGCTGTGGCGCTTGTTGGTG +
Preference number: 6 (lower is better)
Translates to: RVVIGCRLALGK*ILSPALWRLLV
Trigger: CACCAACAAGCGCCACAGCGCCGGTGATAGGATGCATTTCCCGAGAGCCAGCCTGCAGCCTATCACCACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp ACGGCAGCATGTCTTCAATCTCTGCCAGGTGGAGAGTaGCTTCCAGGACAATGGGTGGGCCCCTCTGTCCCT +
Preference number: 6 (lower is better)
Translates to: TAACLQSLPGGE*LPGQWVGPSVP
Trigger: AGGGACAGAGGGGCCCACCCATTGTCCTGGAAGCCACTCTCCACCTGGCAGAGATTGAAGACATGCTGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp TCAGGGGCCACGTCATGGATCACCAGGGAACCGTTCTaGAAGATGTGCATCCTGGGTCCCAGCTTGGTAGGG +
Preference number: 6 (lower is better)
Translates to: SGATSWITREPF*KMCILGPSLVG
Trigger: CCCTACCAAGCTGGGACCCAGGATGCACATCTTCCAGAACGGTTCCCTGGTGATCCATGACGTGGCCCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp GATGGTCTGGATCATCTTGTATGGGGGAGGGCTGCCTaGGCCCTCCGAGTCTTCCATCACTGGCTTGTCCAC +
Preference number: 6 (lower is better)
Translates to: DGLDHLVWGRAA*ALRVFHHWLVH
Trigger: GTGGACAAGCCAGTGATGGAAGACTCGGAGGGCCCAGGCAGCCCTCCCCCATACAAGATGATCCAGACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp AGACTTAGTGGAGAAGTCACCCTCCAGGACAGCCTCTaGAGACATCCAACGCAGAGGTACCCAGGCCTGGCG +
Preference number: 6 (lower is better)
Translates to: RLSGEVTLQDSL*RHPTQRYPGLA
Trigger: CGCCAGGCCTGGGTACCTCTGCGTTGGATGTCTCCAGAGGCTGTCCTGGAGGGTGACTTCTCCACTAAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp GATGCAACGGTAGACGCCTGCATTCCGTGGCCGGACTaGGGTCAGCAGCAGAGAGCCATTGGCAAACACCAC +
Preference number: 6 (lower is better)
Translates to: DATVDACIPWPD*GQQQRAIGKHH
Trigger: GTGGTGTTTGCCAATGGCTCTCTGCTGCTGACCCAAGTCCGGCCACGGAATGCAGGCGTCTACCGTTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp CAACTTCCCGAACATCTCCACCTCTCTCCGGAAGTCCAGCTGTTGTaGCTCGTCCCTGCTCTGCAGGCTCTTCACGAGGACCAGGGTCTC +
Preference number: 6 (lower is better)
Translates to: QLPEHLHLSPEVQLL*LVPALQALHEDQGL
Trigger: GAGACCCTGGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAGAGAGGTGGAGATGTTCGGGAAGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp GTTCAACTTCCCGAACATCTCCACCTCTCTCCGGAAGTCCAGCTGTaGTTGCTCGTCCCTGCTCTGCAGGCTCTTCACGAGGACCAGGGT +
Preference number: 6 (lower is better)
Translates to: VQLPEHLHLSPEVQL*LLVPALQALHEDQG
Trigger: ACCCTGGTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAGAGAGGTGGAGATGTTCGGGAAGTTGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GAGCGCGGATCTGGCCCTGTGGCTCGTTGGATGCAATaGAAGTGTAGTTGCCAGCATCATCTCGGGTCACTC +
Preference number: 6 (lower is better)
Translates to: ERGSGPVARWMQ*KCSCQHHLGSL
Trigger: GAGTGACCCGAGATGATGCTGGCAACTACACTTGCATTGCATCCAACGAGCCACAGGGCCAGATCCGCGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GCACTGATCAGGCAGTTGCGAGCCGCTAAGTCCTTGTaGACAAAGCGGTTGTTGGACAGGTGCTCCATGCCC +
Preference number: 6 (lower is better)
Translates to: ALIRQLRAAKSL*TKRLLDRCSMP
Trigger: GGGCATGGAGCACCTGTCCAACAACCGCTTTGTGCACAAGGACTTAGCGGCTCGCAACTGCCTGATCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp TTATCCCGAGCCACACACTGGAAAGCACCAGAATCCTaGAGCCGGTCCACAGCTGCGAAACTCAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LSRATHWKAPES*SRSTAAKLRLL
Trigger: CAGCAGCCTGAGTTTCGCAGCTGTGGACCGGCTCCAGGATTCTGGTGCTTTCCAGTGTGTGGCTCGGGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp GAACATCTCCACCTCTCTCCGGAAGTCCAGCTGTTGTaGCTCGTCCCTGCTCTGCAGGCTCTTCACGAGGAC +
Preference number: 6 (lower is better)
Translates to: EHLHLSPEVQLL*LVPALQALHED
Trigger: GTCCTCGTGAAGAGCCTGCAGAGCAGGGACGAGCAACAACAGCTGGACTTCCGGAGAGAGGTGGAGATGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp GACACCTTCACCTGCCTCTGGGCACTGATCAGGCAGTaGCGAGCCGCTAAGTCCTTGTGCACAAAGCGGTTG +
Preference number: 6 (lower is better)
Translates to: DTFTCLWALIRQ*RAAKSLCTKRL
Trigger: CAACCGCTTTGTGCACAAGGACTTAGCGGCTCGCAACTGCCTGATCAGTGCCCAGAGGCAGGTGAAGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp CCAGCATCATCTCGGGTCACTCGGGCAAAGTGTAGGGTTCCAGCATaGTCTGTCACCCATTCAGGGAGGCTACTTCCATCTGCCCGTACC +
Preference number: 6 (lower is better)
Translates to: PASSRVTRAKCRVPA*SVTHSGRLLPSART
Trigger: GGTACGGGCAGATGGAAGTAGCCTCCCTGAATGGGTGACAGACAATGCTGGAACCCTACACTTTGCCCGAGTGACCCGAGATGATGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp TTGAAGGTGATGAAAACTGCCACCGTCAGCTGGACATaGGCGCGGATCTGGCCCTGTGGCTCGTTGGATGCA +
Preference number: 6 (lower is better)
Translates to: LKVMKTATVSWT*ARIWPCGSLDA
Trigger: TGCATCCAACGAGCCACAGGGCCAGATCCGCGCTCATGTCCAGCTGACGGTGGCAGTTTTCATCACCTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp GTCAACGCCACTTCTTCCTGGATCTCGGCTGATGGCTaGCCATTCTGCAAAGGCCCACCATTGAGGCACTCC +
Preference number: 6 (lower is better)
Translates to: VNATSSWISADG*PFCKGPPLRHS
Trigger: GGAGTGCCTCAATGGTGGGCCTTTGCAGAATGGTCAGCCATCAGCCGAGATCCAGGAAGAAGTGGCGTTGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GACATGAGCGCGGATCTGGCCCTGTGGCTCGTTGGATaGAATGCAAGTGTAGTTGCCAGCATCATCTCGGGT +
Preference number: 6 (lower is better)
Translates to: DMSADLALWLVG*NASVVASIISG
Trigger: ACCCGAGATGATGCTGGCAACTACACTTGCATTGCATCCAACGAGCCACAGGGCCAGATCCGCGCTCATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CTTGCCAGCCTGCAAGTCTGCCAGCACCTCATCATCTaGCTGTCCACCATGGGGCATCTCTCCATGAGTGAA +
Preference number: 6 (lower is better)
Translates to: LASLQVCQHLII*LSTMGHLSMSE
Trigger: TTCACTCATGGAGAGATGCCCCATGGTGGACAGGCAGATGATGAGGTGCTGGCAGACTTGCAGGCTGGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp ACTTCCTCTCCAGTGACGTTATCCCGAGCCACACACTaGAAAGCACCAGAATCCTGGAGCCGGTCCACAGCT +
Preference number: 6 (lower is better)
Translates to: TSSPVTLSRATH*KAPESWSRSTA
Trigger: AGCTGTGGACCGGCTCCAGGATTCTGGTGCTTTCCAGTGTGTGGCTCGGGATAACGTCACTGGAGAGGAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp TGGGCACTGATCAGGCAGTTGCGAGCCGCTAAGTCCTaGTGCACAAAGCGGTTGTTGGACAGGTGCTCCATG +
Preference number: 6 (lower is better)
Translates to: WALIRQLRAAKS*CTKRLLDRCSM
Trigger: CATGGAGCACCTGTCCAACAACCGCTTTGTGCACAAGGACTTAGCGGCTCGCAACTGCCTGATCAGTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp CCACCCTGGCAAAGCTTTCATCTGCAACACTCAAGGTaGAGTTCTGGCTGCTGCAGGCCTGGCCAAAGGCAT +
Preference number: 6 (lower is better)
Translates to: PPWQSFHLQHSR*SSGCCRPGQRH
Trigger: ATGCCTTTGGCCAGGCCTGCAGCAGCCAGAACTTCACCTTGAGTGTTGCAGATGAAAGCTTTGCCAGGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp GGCAGGTGTAGACACCAGTATCACTCTCAGCGATGGTaGCAAACACAAGCTCAAGGCCCTTCTGGTGGACCC +
Preference number: 6 (lower is better)
Translates to: GRCRHQYHSQRW*QTQAQGPSGGP
Trigger: GGGTCCACCAGAAGGGCCTTGAGCTTGTGTTTGTCACCATCGCTGAGAGTGATACTGGTGTCTACACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp CAAGCTGGTCAACGCCACTTCTTCCTGGATCTCGGCTaGTGGCTGACCATTCTGCAAAGGCCCACCATTGAG +
Preference number: 6 (lower is better)
Translates to: QAGQRHFFLDLG*WLTILQRPTIE
Trigger: CTCAATGGTGGGCCTTTGCAGAATGGTCAGCCATCAGCCGAGATCCAGGAAGAAGTGGCGTTGACCAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp ATTGACATCCTGTCGCCGCTGACCAGCCAGGTTGCTTaGATGGCAGGTGTAGACACCAGTATCACTCTCAGC +
Preference number: 6 (lower is better)
Translates to: IDILSPLTSQVA*MAGVDTSITLS
Trigger: GCTGAGAGTGATACTGGTGTCTACACCTGCCATGCAAGCAACCTGGCTGGTCAGCGGCGACAGGATGTCAAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp CAGGGCACCGTAGCCTCCTTATCAAACTCCATGCACTaGTGTGGCTGCGGTGGTGGCGTGAACTTGAGTTTT +
Preference number: 6 (lower is better)
Translates to: QGTVASLSNSMH*CGCGGGVNLSF
Trigger: AAAACTCAAGTTCACGCCACCACCGCAGCCACAGCAGTGCATGGAGTTTGATAAGGAGGCTACGGTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GGCCCTGTGGCTCGTTGGATGCAATGCAAGTGTAGTTaGCAGCATCATCTCGGGTCACTCGGGCAAAGTGTA +
Preference number: 6 (lower is better)
Translates to: GPVARWMQCKCS*QHHLGSLGQSV
Trigger: TACACTTTGCCCGAGTGACCCGAGATGATGCTGGCAACTACACTTGCATTGCATCCAACGAGCCACAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GTACTCACTGTTGTATACATCCTTGCTCAGGCCCAGTaGGGACACCTTCACCTGCCTCTGGGCACTGATCAG +
Preference number: 6 (lower is better)
Translates to: VLTVVYILAQAQ*GHLHLPLGTDQ
Trigger: CTGATCAGTGCCCAGAGGCAGGTGAAGGTGTCCGCACTGGGCCTGAGCAAGGATGTATACAACAGTGAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS GCA 72 bp GGCGGAAGTGGTAGTACTCACTGTTGTATACATCCTTaGTCAGGCCCAGTGCGGACACCTTCACCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: GGSGSTHCCIHP*SGPVRTPSPAS
Trigger: AGAGGCAGGTGAAGGTGTCCGCACTGGGCCTGAGCAAGGATGTATACAACAGTGAGTACTACCACTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp GCAAAGCTTTCATCTGCAACACTCAAGGTGAAGTTCTaGCTGCTGCAGGCCTGGCCAAAGGCATTGTGGGCA +
Preference number: 6 (lower is better)
Translates to: AKLSSATLKVKF*LLQAWPKALWA
Trigger: TGCCCACAATGCCTTTGGCCAGGCCTGCAGCAGCCAGAACTTCACCTTGAGTGTTGCAGATGAAAGCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp CTGAGATCAGCATCTGGTTCCTGTACCAGATCACAGTaGGCTTGGGTGTGGCCTGTGTCAGACAGTGCAAGT +
Preference number: 6 (lower is better)
Translates to: LRSASGSCTRSQ*AWVWPVSDSAS
Trigger: ACTTGCACTGTCTGACACAGGCCACACCCAAGCCCACTGTGATCTGGTACAGGAACCAGATGCTGATCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp CTTATCAAACTCCATGCACTGCTGTGGCTGCGGTGGTaGCGTGAACTTGAGTTTTTCCAGCACCTGGACTCG +
Preference number: 6 (lower is better)
Translates to: LIKLHALLWLRW*RELEFFQHLDS
Trigger: CGAGTCCAGGTGCTGGAAAAACTCAAGTTCACGCCACCACCGCAGCCACAGCAGTGCATGGAGTTTGATAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp CACCGTAGCCTCCTTATCAAACTCCATGCACTGCTGTaGCTGCGGTGGTGGCGTGAACTTGAGTTTTTCCAG +
Preference number: 6 (lower is better)
Translates to: HRSLLIKLHALL*LRWWRELEFFQ
Trigger: CTGGAAAAACTCAAGTTCACGCCACCACCGCAGCCACAGCAGTGCATGGAGTTTGATAAGGAGGCTACGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp TCTCGGGTCACTCGGGCAAAGTGTAGGGTTCCAGCATaGTCTGTCACCCATTCAGGGAGGCTACTTCCATCT +
Preference number: 6 (lower is better)
Translates to: SRVTRAKCRVPA*SVTHSGRLLPS
Trigger: AGATGGAAGTAGCCTCCCTGAATGGGTGACAGACAATGCTGGAACCCTACACTTTGCCCGAGTGACCCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CCA 72 bp GAAACTTCGAACCTCGAGTCCTCTGAGATCAGCATCTaGTTCCTGTACCAGATCACAGTGGGCTTGGGTGTG +
Preference number: 6 (lower is better)
Translates to: ETSNLESSEISI*FLYQITVGLGV
Trigger: CACACCCAAGCCCACTGTGATCTGGTACAGGAACCAGATGCTGATCTCAGAGGACTCGAGGTTCGAAGTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp TGGCCCTGGTACACAGTTGTACGCTCAGGTTCCACTTaGAAGGTGATGAAAACTGCCACCGTCAGCTGGACA +
Preference number: 6 (lower is better)
Translates to: WPWYTVVRSGST*KVMKTATVSWT
Trigger: TGTCCAGCTGACGGTGGCAGTTTTCATCACCTTCAAAGTGGAACCTGAGCGTACAACTGTGTACCAGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp CTGCTCACGCAACGGTACAATGTCCCGTCATACACCTCCACACTATaGATGCGCAAGGTCCCATTCTTCGAAACTTCGAACCTCGAGTCC +
Preference number: 6 (lower is better)
Translates to: LLTQRYNVPSYTSTL*MRKVPFFETSNLES
Trigger: GGACTCGAGGTTCGAAGTTTCGAAGAATGGGACCTTGCGCATCAATAGTGTGGAGGTGTATGACGGGACATTGTACCGTTGCGTGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp TTCAGGACCACAGGACCTGCTTCGATCCATTTGATGTaGAAGGAGGCATTAGTACTGCGGACTTCCTCTCCA +
Preference number: 6 (lower is better)
Translates to: FRTTGPASIHLM*KEALVLRTSSP
Trigger: TGGAGAGGAAGTCCGCAGTACTAATGCCTCCTTCAACATCAAATGGATCGAAGCAGGTCCTGTGGTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS TCA 72 bp AACGGTACAATGTCCCGTCATACACCTCCACACTATTaGTGCGCAAGGTCCCATTCTTCGAAACTTCGAACC +
Preference number: 6 (lower is better)
Translates to: NGTMSRHTPPHY*CARSHSSKLRT
Trigger: GGTTCGAAGTTTCGAAGAATGGGACCTTGCGCATCAATAGTGTGGAGGTGTATGACGGGACATTGTACCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp CAACGGTACAATGTCCCGTCATACACCTCCACACTATaGATGCGCAAGGTCCCATTCTTCGAAACTTCGAAC +
Preference number: 6 (lower is better)
Translates to: QRYNVPSYTSTL*MRKVPFFETSN
Trigger: GTTCGAAGTTTCGAAGAATGGGACCTTGCGCATCAATAGTGTGGAGGTGTATGACGGGACATTGTACCGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 90 bp TGTTTGGTGCTGAGGGGCTGTGACTTCAACTTTTCATCCTTGTTCTaGGAAATCCTCAGGAACTGTTTGAGATCTCCCAGGTCCACATAC +
Preference number: 6 (lower is better)
Translates to: CLVLRGCDFNFSSLF*EILRNCLRSPRSTY
Trigger: GTATGTGGACCTGGGAGATCTCAAACAGTTCCTGAGGATTTCCAAGAACAAGGATGAAAAGTTGAAGTCACAGCCCCTCAGCACCAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10
CDS CAA 72 bp TTTTCATCCTTGTTCTTGGAAATCCTCAGGAACTGTTaGAGATCTCCCAGGTCCACATACTCCAGCACCATG +
Preference number: 6 (lower is better)
Translates to: FSSLFLEILRNC*RSPRSTYSSTM
Trigger: CATGGTGCTGGAGTATGTGGACCTGGGAGATCTCAAACAGTTCCTGAGGATTTCCAAGAACAAGGATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044442.10