Pregenerated sensors for PTK6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038751Ensembl transcript IDs: ENSMUST00000016511.6
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTGACTCCATCGTCTTCCCTCTGCTTCTGCGGACCCCAGGTGATTaGGTATCTCAAGCACTCACTCCCCACTGGGCACCGGAAACCACA | + |
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Preference number: 1 (lower is better) Translates to: TDSIVFPLLLRTPGD*VSQALTPHWAPETT Trigger: TGTGGTTTCCGGTGCCCAGTGGGGAGTGAGTGCTTGAGATACCCAATCACCTGGGGTCCGCAGAAGCAGAGGGAAGACGATGGAGTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CCA 90 bp | TGCAGAGCCTCGGGCAGAGATGCAGAAGAGCTGCCTCTGCCCACATaGTTAAGAATCCTGGCTCTGCCAGGCAACAACAGTAGCACATGC | + |
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Preference number: 1 (lower is better) Translates to: CRASGRDAEELPLPT*LRILALPGNNSSTC Trigger: GCATGTGCTACTGTTGTTGCCTGGCAGAGCCAGGATTCTTAACCATGTGGGCAGAGGCAGCTCTTCTGCATCTCTGCCCGAGGCTCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 90 bp | ATAGCCTGTCTAGCCTTTATGGGTCAAGTATGGGTTCAAAAGCACTaGAGACACATGAGGGAGAGCAGCCTTGGACCAGAGCCATCTTGG | + |
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Preference number: 1 (lower is better) Translates to: IACLAFMGQVWVQKH*RHMRESSLGPEPSW Trigger: CCAAGATGGCTCTGGTCCAAGGCTGCTCTCCCTCATGTGTCTTCAGTGCTTTTGAACCCATACTTGACCCATAAAGGCTAGACAGGCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CCA 90 bp | CAGGTAGCCTCGGGTACGTGCTTTTGGGATACTCCCCCTCAGAACTaGGGTTCTAATCTCCAAGTACATAAGGAGATGAAATGGAGAACA | + |
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Preference number: 1 (lower is better) Translates to: QVASGTCFWDTPPQN*GSNLQVHKEMKWRT Trigger: TGTTCTCCATTTCATCTCCTTATGTACTTGGAGATTAGAACCCCAGTTCTGAGGGGGAGTATCCCAAAAGCACGTACCCGAGGCTACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 90 bp | CTCCCCCTCAGAACTGGGGTTCTAATCTCCAAGTACATAAGGAGATaGAATGGAGAACAGATAGCCTGTCTAGCCTTTATGGGTCAAGTA | + |
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Preference number: 1 (lower is better) Translates to: LPLRTGVLISKYIRR*NGEQIACLAFMGQV Trigger: TACTTGACCCATAAAGGCTAGACAGGCTATCTGTTCTCCATTTCATCTCCTTATGTACTTGGAGATTAGAACCCCAGTTCTGAGGGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR GCA 90 bp | TTTATTCAAAGGTTTTCATTTGCCCTGTTTCCAAACATTTTCCTGTaGTCTCCCTATCTAGTGACGACGTTACATCCCAGAGAGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: FIQRFSFALFPNIFL*SPYLVTTLHPRELL Trigger: AAGCAGCTCTCTGGGATGTAACGTCGTCACTAGATAGGGAGAGCACAGGAAAATGTTTGGAAACAGGGCAAATGAAAACCTTTGAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR GCA 90 bp | GGGTCAAGTATGGGTTCAAAAGCACTGAAGACACATGAGGGAGAGCAGCCTTGGAGCCTCGGGCAGAGATaGAGAAGAGCTGCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GSSMGSKALKTHEGEQPWSLGQR*RRAASA Trigger: GGCAGAGGCAGCTCTTCTGCATCTCTGCCCGAGGCT...CCAAGGCTGCTCTCCCTCATGTGTCTTCAGTGCTTTTGAACCCATACTTGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTGTAAGGAAGGTTGCGGCATCTTCACCTGTTGTGAGAGGGCAATCTGGACGAGGCCCTCTTCTGTaGGTCCTGGCCACGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: VSVRKVAASSPVVRGQSGRGPLL*VLATSK Trigger: CTTGGACGTGGCCAGGACCCACAGAAGAGGGCCTCG...TCCAGATTGCCCTCTCACAACAGGTGAAGATGCCGCAACCTTCCTTACAGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGTCCAAATTCTGTTCTTGGTGAAAATGAAAGGTTCAGTTACTGAGAGAGGGGCCTCCTCTACAAAGTaGGTTCCAGGAGAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PVQILFLVKMKGSVTERGASSTK*VPGEPG Trigger: CCCTGGCTCTCCTGGAACTCACTTTGTAGAGGAGGC...CCCTCTCTCAGTAACTGAACCTTTCATTTTCACCAAGAACAGAATTTGGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR TCA 90 bp | GTTTCTGTAAGGAAGGTTGCGGCATCTTCACCTGTTGTGAGAGGGCAATCTGGAGCTCCAAAAGTGGTATaGAAAGAACTCCACAAGGCC | + |
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Preference number: 2 (lower is better) Translates to: VSVRKVAASSPVVRGQSGAPKVV*KELHKA Trigger: GGCCTTGTGGAGTTCTTTTCATACCACTTTTGGAGC...TCCAGATTGCCCTCTCACAACAGGTGAAGATGCCGCAACCTTCCTTACAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR TCA 90 bp | TTTGCCCTGTTTCCAAACATTTTCCTGTGCTCTCCCTATCTAGTGACGACGTTAGGGCAAAAGCATCTCTaGAGGGAAAGGACACGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FALFPNIFLCSPYLVTTLGQKHL*RERTRS Trigger: GCTCCGTGTCCTTTCCCTTCAGAGATGCTTTTGCCC...TAACGTCGTCACTAGATAGGGAGAGCACAGGAAAATGTTTGGAAACAGGGCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR GCA 90 bp | TATAAGGGTATCCTGCCTCAGGAACCCAGGGCAAAAGCATCTCTGAAGGGAAAGCTGGATTTTGTGTATTaGCTCCTGGAGGAGGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: YKGILPQEPRAKASLKGKLDFVY*LLEEGK Trigger: CTTTCCCTCCTCCAGGAGGCAATACACAAAATCCAG...CTTTCCCTTCAGAGATGCTTTTGCCCTGGGTTCCTGAGGCAGGATACCCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGTCCAAATTCTGTTCTTGGTGAAAATGAAAGGTTCAGTTACTGAGAGAGGGTCTTCCCTCTGCTTCTaGGGACCCCAGGTGATTGGG | + |
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Preference number: 2 (lower is better) Translates to: PVQILFLVKMKGSVTERGSSLCF*GPQVIG Trigger: CCCAATCACCTGGGGTCCGCAGAAGCAGAGGGAAGA...CCCTCTCTCAGTAACTGAACCTTTCATTTTCACCAAGAACAGAATTTGGACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CAA 90 bp | AGTGGTATGAAAAGAACTCCACAAGGCCTGTTGCCTAGACTCTTCTaGGCTTCTCTGTCACATGAAGTCTTCACAGGAGAAGGGAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: SGMKRTPQGLLPRLF*ASLSHEVFTGEGRK Trigger: CTTCCTCCCTTCTCCTGTGAAGACTTCATGTGACAGAGAAGCCAAGAAGAGTCTAGGCAACAGGCCTTGTGGAGTTCTTTTCATACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGTCCAAATTCTGTTCTTGGTGAAAATGAAAGGTTCAGTTACTGAGAGAGGGTCCCGGTCTACAGAATaGCTTCCTGGACAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PVQILFLVKMKGSVTERGSRSTE*LPGQPE Trigger: CTCTGGCTGTCCAGGAAGTCATTCTGTAGACCGGGA...CCCTCTCTCAGTAACTGAACCTTTCATTTTCACCAAGAACAGAATTTGGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTGTAAGGAAGGTTGCGCTGCCTCTGCCCACATaGTTAAGAATCCTGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: QKVSSLGYREDVSVRKVALPLPT*LRILAL Trigger: CAGAGCCAGGATTCTTAACCATGTGGGCAGAGGCAG...CGCAACCTTCCTTACAGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR GCA 90 bp | AACTCTGTAGACCAGGCTGCTCCCAAACACACAGATATACCTGAATCTGCTTCACTAGGATTAAAGATGTaGACCACCAAGCCCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: NSVDQAAPKHTDIPESASLGLKM*TTKPSP Trigger: TGGACTGGGCTTGGTGGTGCACATCTTTAATCCTAG...TGAAGCAGATTCAGGTATATCTGTGTGTTTGGGAGCAGCCTGGTCTACAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCCTGTTTCCAAACATTTTCCTGTGCTCTCCCTATCTAGTGACGACGTTATTTAATCCCAGCACTTaGGAAGCAGAGGCAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: FALFPNIFLCSPYLVTTLFNPST*EAEAGG Trigger: TCCACCTGCCTCTGCTTCCCAAGTGCTGGGATTAAA...TAACGTCGTCACTAGATAGGGAGAGCACAGGAAAATGTTTGGAAACAGGGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CAA 90 bp | CAGTCAAGCTCCAAAAGTGGTATGAAAAGAACTCCACAAGGCCTGTaGCCTAGACTCTTCTTGGCTTCTCTGTCACATGAAGTCTTCACA | + |
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Preference number: 2 (lower is better) Translates to: QSSSKSGMKRTPQGL*PRLFLASLSHEVFT Trigger: TGTGAAGACTTCATGTGACAGAGAAGCCAAGAAGAGTCTAGGCAACAGGCCTTGTGGAGTTCTTTTCATACCACTTTTGGAGCTTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTACCTCTGTCTCTCAAGTGCTAGGATTAAAGATGTGCACCACCAAGCCCATAAGGAGATGAAATaGAGAACAGATAGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: SAYLCLSSARIKDVHHQAHKEMK*RTDSLS Trigger: AGACAGGCTATCTGTTCTCCATTTCATCTCCTTATG...GGCTTGGTGGTGCACATCTTTAATCCTAGCACTTGAGAGACAGAGGTAGGCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | GGGTCAAGTATGGGTTCAAAAGCACTGAAGACACATGAGGGAGAGCAGCCTTGGTATTTGAGGTATGTTTaGTATGTTTCCTATCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: GSSMGSKALKTHEGEQPWYLRYV*YVSYPF Trigger: GAAGGGATAGGAAACATACCAAACATACCTCAAATA...CCAAGGCTGCTCTCCCTCATGTGTCTTCAGTGCTTTTGAACCCATACTTGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTGTAAGGAAGGTTGCGCAGAGAGTGACTTTCTaGATTTTGTGTATTGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: QKVSSLGYREDVSVRKVAQRVTF*ILCIAS Trigger: GGAGGCAATACACAAAATCCAGAAAGTCACTCTCTG...CGCAACCTTCCTTACAGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGCCCTGTTTCCAAACATTTTCCTGTGCTCTCCCTATCTAGTGACGACGTTAGTCAAGCTCCAAAAGTaGTATGAAAAGAACTCCACA | + |
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Preference number: 2 (lower is better) Translates to: FALFPNIFLCSPYLVTTLVKLQK*YEKNST Trigger: TGTGGAGTTCTTTTCATACCACTTTTGGAGCTTGAC...TAACGTCGTCACTAGATAGGGAGAGCACAGGAAAATGTTTGGAAACAGGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CAA 90 bp | AAGGGAAAGGAGCCTCTTTACTCTTTCCTTGACAAAACGCAGTATTaGAGGTATGTTTGGTATGTTTCCTATCCCTTCATCTCAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: KGKEPLYSFLDKTQY*RYVWYVSYPFISVN Trigger: GTTTACTGAGATGAAGGGATAGGAAACATACCAAACATACCTCAAATACTGCGTTTTGTCAAGGAAAGAGTAAAGAGGCTCCTTTCCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR TCA 90 bp | TTACAGGAAGCAGTACAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTAAGTACATAAGGAGATaGAATGGAGAACAGATAGCC | + |
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Preference number: 2 (lower is better) Translates to: LQEAVQKVSSLGYREDVSKYIRR*NGEQIA Trigger: GGCTATCTGTTCTCCATTTCATCTCCTTATGTACTT...AGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTGTACTGCTTCCTGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR GCA 90 bp | GACTCTACAAACAGCCAAATGTACACGGTCCCTATAGCTTTAATTTTAGAACGTTGTGGCATAAGATCCTaGAGAATTAAGGTGCTAAAG | + |
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Preference number: 2 (lower is better) Translates to: DSTNSQMYTVPIALILERCGIRS*RIKVLK Trigger: CTTTAGCACCTTAATTCTGCAGGATCTTATGCCACA...ACGTTCTAAAATTAAAGCTATAGGGACCGTGTACATTTGGCTGTTTGTAGAGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CCA 90 bp | TCTACAAACAGCCAAATGTACACGGTCCCTATAGCTTTAATTTTAGAACGTTTAAACAAGAAAATCTCCTaGCTCTTACTGACTCCATCG | + |
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Preference number: 2 (lower is better) Translates to: STNSQMYTVPIALILERLNKKIS*LLLTPS Trigger: CGATGGAGTCAGTAAGAGCCAGGAGATTTTCTTGTT...TAAACGTTCTAAAATTAAAGCTATAGGGACCGTGTACATTTGGCTGTTTGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 72 bp | CTCCATCGTCTTCCCTCTGCTTCTGCGGACCCCAGGTaGTTGGGTATCTCAAGCACTCACTCCCCACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: LHRLPSASADPR*LGISSTHSPLG Trigger: GCCCAGTGGGGAGTGAGTGCTTGAGATACCCAATCACCTGGGGTCCGCAGAAGCAGAGGGAAGACGATGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CCA 72 bp | ATCGTCTTCCCTCTGCTTCTGCGGACCCCAGGTGATTaGGTATCTCAAGCACTCACTCCCCACTGGGCACCG | + |
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Preference number: 3 (lower is better) Translates to: IVFPLLLRTPGD*VSQALTPHWAP Trigger: CGGTGCCCAGTGGGGAGTGAGTGCTTGAGATACCCAATCACCTGGGGTCCGCAGAAGCAGAGGGAAGACGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CCA 72 bp | TCGGGCAGAGATGCAGAAGAGCTGCCTCTGCCCACATaGTTAAGAATCCTGGCTCTGCCAGGCAACAACAGT | + |
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Preference number: 3 (lower is better) Translates to: SGRDAEELPLPT*LRILALPGNNS Trigger: ACTGTTGTTGCCTGGCAGAGCCAGGATTCTTAACCATGTGGGCAGAGGCAGCTCTTCTGCATCTCTGCCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CCA 72 bp | CACATGAGGGAGAGCAGCCTTGGACCAGAGCCATCTTaGAAAACTCGGGTCCAAATGGGAATCAGAGGATGG | + |
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Preference number: 3 (lower is better) Translates to: HMRESSLGPEPS*KTRVQMGIRGW Trigger: CCATCCTCTGATTCCCATTTGGACCCGAGTTTTCCAAGATGGCTCTGGTCCAAGGCTGCTCTCCCTCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR GCA 72 bp | AAGAAGCCAGAGAGTGACTTTCTGGATTTTGTGTATTaGCTCCTGGAGGAGGGAAAGGAAGCCGGGTTGCGC | + |
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Preference number: 3 (lower is better) Translates to: KKPESDFLDFVY*LLEEGKEAGLR Trigger: GCGCAACCCGGCTTCCTTTCCCTCCTCCAGGAGGCAATACACAAAATCCAGAAAGTCACTCTCTGGCTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CAA 90 bp | GTGCTAAAGGGTAGGGTATGTGTTTGTGGACAGTCAAGCTCCAAAAGTGGTATGGGAAAGGAAGCCGGGTaGCGCACGCCTTTGATCCCA | + |
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Preference number: 3 (lower is better) Translates to: VLKGRVCVCGQSSSKSGMGKEAG*RTPLIP Trigger: TGGGATCAAAGGCGTGCGCAACCCGGCTTCCTTTCC...CATACCACTTTTGGAGCTTGACTGTCCACAAACACATACCCTACCCTTTAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CAA 90 bp | AACTCGGGTCCAAATGGGAATCAGAGGATGGCACAGGATATAAGGGTATCCTGCACTCCACAAGGCCTGTaGCCTAGACTCTTCTTGGCT | + |
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Preference number: 3 (lower is better) Translates to: NSGPNGNQRMAQDIRVSCTPQGL*PRLFLA Trigger: AGCCAAGAAGAGTCTAGGCAACAGGCCTTGTGGAGT...GCAGGATACCCTTATATCCTGTGCCATCCTCTGATTCCCATTTGGACCCGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 72 bp | GTATCCTGCCTCAGGAACCCAGGGCAAAAGCATCTCTaGAGGGAAAGGACACGGAGCTCTGAAAGTAAACAC | + |
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Preference number: 3 (lower is better) Translates to: VSCLRNPGQKHL*RERTRSSESKH Trigger: GTGTTTACTTTCAGAGCTCCGTGTCCTTTCCCTTCAGAGATGCTTTTGCCCTGGGTTCCTGAGGCAGGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 72 bp | CTAGCCTTTATGGGTCAAGTATGGGTTCAAAAGCACTaGAGACACATGAGGGAGAGCAGCCTTGGACCAGAG | + |
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Preference number: 3 (lower is better) Translates to: LAFMGQVWVQKH*RHMRESSLGPE Trigger: CTCTGGTCCAAGGCTGCTCTCCCTCATGTGTCTTCAGTGCTTTTGAACCCATACTTGACCCATAAAGGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR GCA 72 bp | CCTACCTCTGTCTCTCAAGTGCTAGGATTAAAGATGTaGACCACCAAGCCCAGTCCAAATTCTGTTCTTGGT | + |
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Preference number: 3 (lower is better) Translates to: PTSVSQVLGLKM*TTKPSPNSVLG Trigger: ACCAAGAACAGAATTTGGACTGGGCTTGGTGGTGCACATCTTTAATCCTAGCACTTGAGAGACAGAGGTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CCA 72 bp | TCGGGTACGTGCTTTTGGGATACTCCCCCTCAGAACTaGGGTTCTAATCTCCAAGTACATAAGGAGATGAAA | + |
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Preference number: 3 (lower is better) Translates to: SGTCFWDTPPQN*GSNLQVHKEMK Trigger: TTTCATCTCCTTATGTACTTGGAGATTAGAACCCCAGTTCTGAGGGGGAGTATCCCAAAAGCACGTACCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CAA 90 bp | TTTGCCCTGTTTCCAAACATTTTCCTGTGCTCTCCCTATCTAGTGACGACGTTATCTGGATTTTGTGTATaGCCTCCTGGAGGAGGGAAA | + |
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Preference number: 3 (lower is better) Translates to: FALFPNIFLCSPYLVTTLSGFCV*PPGGGK Trigger: TTTCCCTCCTCCAGGAGGCAATACACAAAATCCAGA...TAACGTCGTCACTAGATAGGGAGAGCACAGGAAAATGTTTGGAAACAGGGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CAA 90 bp | GTTTCTGTAAGGAAGGTTGCGGCATCTTCACCTGTTGTGAGAGGGCAATCTGGAGAAAATCATGTAAACTaGTTCTGGGTTGTATGTGGC | + |
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Preference number: 3 (lower is better) Translates to: VSVRKVAASSPVVRGQSGENHVN*FWVVCG Trigger: GCCACATACAACCCAGAACAAGTTTACATGATTTTC...TCCAGATTGCCCTCTCACAACAGGTGAAGATGCCGCAACCTTCCTTACAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 72 bp | ATCTCTGTGAATTTAATGCCATCCCGGTCTACAGAATaGCTTCCTGGACAGCCAGAGCTACATAGAGAAAAC | + |
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Preference number: 3 (lower is better) Translates to: ISVNLMPSRSTE*LPGQPELHREN Trigger: GTTTTCTCTATGTAGCTCTGGCTGTCCAGGAAGTCATTCTGTAGACCGGGATGGCATTAAATTCACAGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CCA 72 bp | TGGGGTTCTAATCTCCAAGTACATAAGGAGATGAAATaGAGAACAGATAGCCTGTCTAGCCTTTATGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: WGSNLQVHKEMK*RTDSLSSLYGS Trigger: TGACCCATAAAGGCTAGACAGGCTATCTGTTCTCCATTTCATCTCCTTATGTACTTGGAGATTAGAACCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CAA 90 bp | AACTCTGTAGACCAGGCTGCTCCCAAACACACAGATATACCTGAATCTGCTTCAGACAAAACGCAGTATTaGAGGTATGTTTGGTATGTT | + |
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Preference number: 3 (lower is better) Translates to: NSVDQAAPKHTDIPESASDKTQY*RYVWYV Trigger: AACATACCAAACATACCTCAAATACTGCGTTTTGTC...TGAAGCAGATTCAGGTATATCTGTGTGTTTGGGAGCAGCCTGGTCTACAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 72 bp | GTTTGGTATGTTTCCTATCCCTTCATCTCAGTAAACTaGAGGATGGTTCATGCCTTCAATAGAAGTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: VWYVSYPFISVN*RMVHAFNRSPG Trigger: TCCTGGACTTCTATTGAAGGCATGAACCATCCTTCAGTTTACTGAGATGAAGGGATAGGAAACATACCAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR-3UTR CAA 90 bp | CAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTGTAAGGAAGGTTGCGGTATTTGAGGTATGTTaGGTATGTTTCCTATCCCTT | + |
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Preference number: 3 (lower is better) Translates to: QKVSSLGYREDVSVRKVAVFEVC*VCFLSL Trigger: AAGGGATAGGAAACATACCAAACATACCTCAAATAC...CGCAACCTTCCTTACAGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR TCA 72 bp | TTCATATCCATTTATCTCTGTCTTCAACTTTCTAGGTaGGGATCCTCCAACAAAACCAAGGTTATAAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: FISIYLCLQLSR*GSSNKTKVIKR Trigger: TCTCTTTATAACCTTGGTTTTGTTGGAGGATCCTCACCTAGAAAGTTGAAGACAGAGATAAATGGATATGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| 3UTR CAA 72 bp | GTGTATTGCCTCCTGGAGGAGGGAAAGGAAGCCGGGTaGCGCACGCCTTTGATCCCAGCACTTGGGAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VYCLLEEGKEAG*RTPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATCAAAGGCGTGCGCAACCCGGCTTCCTTTCCCTCCTCCAGGAGGCAATACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR GCA 90 bp | GAGCTGCCTCTGCCCACATGGTTAAGAATCCTGGCTCTGCCAGGCAACAACAGTATGGAGGAGGTCTCCTaGCTGAAAGCTCAGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELPLPTWLRILALPGNNSMEEVS*LKAQLL Trigger: GAGGAGCTGAGCTTTCAGGCAGGAGACCTCCTCCAT...ACTGTTGTTGCCTGGCAGAGCCAGGATTCTTAACCATGTGGGCAGAGGCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | TCCCTGTGTAGCTCTGGCTGCCCTGAAATTTGCTACATAGACCAGGCTGGCCTGAGCTTCTTCATGGCCTaGATCTCAGCCTGGAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLCSSGCPEICYIDQAGLSFFMA*ISAWKV Trigger: CACCTTCCAGGCTGAGATTCAGGCCATGAAGAAGCT...CAGGCCAGCCTGGTCTATGTAGCAAATTTCAGGGCAGCCAGAGCTACACAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | TCCCTGTGTAGCTCTGGCTGCCCTGAAATTTGCTACATAGACCAGGCTGGCCTGCTCTGCTCCAGCAGCTaGGCATCAGCTTGTGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: SLCSSGCPEICYIDQAGLLCSSS*ASACVC Trigger: ACATACACAAGCTGATGCTCAGCTGCTGGAGCAGAG...CAGGCCAGCCTGGTCTATGTAGCAAATTTCAGGGCAGCCAGAGCTACACAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | GTGATTGGGTATCTCAAGCACTCACTCCCCACTGGGCACCGGAAACCACAAAGCCCTCTGAGCGGGAGATaGAACCAAAGAACCACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VIGYLKHSLPTGHRKPQSPLSGR*NQRTTV Trigger: AACCGTGGTTCTTTGGTTGCATCTCCCGCTCAGAGG...GCTTTGTGGTTTCCGGTGCCCAGTGGGGAGTGAGTGCTTGAGATACCCAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | GTGATTGGGTATCTCAAGCACTCACTCCCCACTGGGCACCGGAAACCACAAAGCGCCTGGAAGGTGTGCTaGTGCAGGAGATTGTCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VIGYLKHSLPTGHRKPQSAWKVC*CRRLSL Trigger: TAGAGACAATCTCCTGCACCAGCACACCTTCCAGGC...GCTTTGTGGTTTCCGGTGCCCAGTGGGGAGTGAGTGCTTGAGATACCCAATCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTGTGTAGCTCTGGCTGCCCTGAAATTTGCTACATAGACCAGGCTGGCCTGGGAAGGTTTCATGATTaGACATGCCTGGGTAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLCSSGCPEICYIDQAGLGRFHD*TCLGRA Trigger: TGCCCTACCCAGGCATGTCCAATCATGAAACCTTCC...CAGGCCAGCCTGGTCTATGTAGCAAATTTCAGGGCAGCCAGAGCTACACAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | GAGGATGTTTCTGTAAGGAAGGTTGCGGCATCTTCACCTGTTGTGAGAGGGCAAAGGAGGTCTCCTGCCTaGAAGCTCAGCTCCTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EDVSVRKVAASSPVVRGQRRSPA*KLSSSS Trigger: AGATGAGGAGCTGAGCTTTCAGGCAGGAGACCTCCT...TTGCCCTCTCACAACAGGTGAAGATGCCGCAACCTTCCTTACAGAAACATCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | TCCTGCAGAATTAAGGTGCTAAAGGGTAGGGTATGTGTTTGTGGACAGTCAAGCCAAGGCCTTGCCTTCTaGATCCAGCAGGGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SCRIKVLKGRVCVCGQSSQGLAF*IQQGGP Trigger: TGGGCCACCCTGCTGGATGCAGAAGGCAAGGCCTTG...GCTTGACTGTCCACAAACACATACCCTACCCTTTAGCACCTTAATTCTGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGTAAGGAAGGTTGCGGCATCTTCACCTGTTGTGAGAGGGCAATCTGGATCCCAGTCATCCCAGTaGGGCAAGGGCTCAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVRKVAASSPVVRGQSGSQSSQ*GKGSVL Trigger: CAAAACTGAGCCCTTGCCCCACTGGGATGACTGGGA...TCCAGATTGCCCTCTCACAACAGGTGAAGATGCCGCAACCTTCCTTACAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | CAAGCTCAGACCGAGTTTGACTTTAGAAACAAGTGCAGAGCCTCGGGCAGAGATTCAGCTTGTGTATGTTaGGTGGGCACTCCAGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QAQTEFDFRNKCRASGRDSACVC*VGTPEG Trigger: GCCCTCTGGAGTGCCCACCCAACATACACAAGCTGA...ATCTCTGCCCGAGGCTCTGCACTTGTTTCTAAAGTCAAACTCGGTCTGAGCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | AACTCTGTAGACCAGGCTGCTCCCAAACACACAGATATACCTGAATCTGCTTCACATCTGTCCGTGCCTTaGAGTCCCAGAGGCCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: NSVDQAAPKHTDIPESASHLSVP*SPRGPH Trigger: ATGTGGGCCTCTGGGACTTCAAGGCACGGACAGATG...TGAAGCAGATTCAGGTATATCTGTGTGTTTGGGAGCAGCCTGGTCTACAGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | GTGCTAAAGGGTAGGGTATGTGTTTGTGGACAGTCAAGCTCCAAAAGTGGTATGGACAGGATGTGCTTGTaGCGCAGCTTCTTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLKGRVCVCGQSSSKSGMDRMCL*RSFFMA Trigger: GGCCATGAAGAAGCTGCGGCACAAGCACATCCTGTC...CATACCACTTTTGGAGCTTGACTGTCCACAAACACATACCCTACCCTTTAGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | TTACAGGAAGCAGTACAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTCCTGCAGCCTGTGCATaGCCTCTGAGCGGGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LQEAVQKVSSLGYREDVSPAACA*PLSGRC Trigger: GCATCTCCCGCTCAGAGGCCATGCACAGGCTGCAGG...AGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTGTACTGCTTCCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | TATAAGGGTATCCTGCCTCAGGAACCCAGGGCAAAAGCATCTCTGAAGGGAAAGGACATAGTCTGCTCCTaGCTTCTGGCTGACTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: YKGILPQEPRAKASLKGKDIVCS*LLADSD Trigger: ATCAGAGTCAGCCAGAAGCCAGGAGCAGACTATGTC...CTTTCCCTTCAGAGATGCTTTTGCCCTGGGTTCCTGAGGCAGGATACCCTTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | ACGACGTTACATCCCAGAGAGCTGCTTTACAGGAAGCAGTACAGAAAGTGTCATACCTTCACAGCCACATaGACCTGGCCTTTCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTLHPRELLYRKQYRKCHTFTAT*TWPFQS Trigger: GCTCTGGAAAGGCCAGGTCCATGTGGCTGTGAAGGT...ATGACACTTTCTGTACTGCTTCCTGTAAAGCAGCTCTCTGGGATGTAACGTCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | TTTGCCCTGTTTCCAAACATTTTCCTGTGCTCTCCCTATCTAGTGACGACGTTACTTGTGTATGTTGGGTaGGCACTCCAGAGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FALFPNIFLCSPYLVTTLLVYVG*ALQRAG Trigger: CCCTGCCCTCTGGAGTGCCCACCCAACATACACAAG...TAACGTCGTCACTAGATAGGGAGAGCACAGGAAAATGTTTGGAAACAGGGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | CTGTTGCCTAGACTCTTCTTGGCTTCTCTGTCACATGAAGTCTTCACAGGAGAAACCAGACATCAGACTTaGTGGAGTAATGCCCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPRLFLASLSHEVFTGETRHQT*WSNALG Trigger: CCCGAGGGCATTACTCCATCAAGTCTGATGTCTGGT...TTCTCCTGTGAAGACTTCATGTGACAGAGAAGCCAAGAAGAGTCTAGGCAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | GGGTCAAGTATGGGTTCAAAAGCACTGAAGACACATGAGGGAGAGCAGCCTTGGGCATCTGCCCCCTGCTaGAAATTTCATGAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GSSMGSKALKTHEGEQPWASAPC*KFHEEE Trigger: TTCTTCTTCATGAAATTTTCAGCAGGGGGCAGATGC...CCAAGGCTGCTCTCCCTCATGTGTCTTCAGTGCTTTTGAACCCATACTTGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | TTACAGGAAGCAGTACAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTCTGCATCCAGCAGGGTaGCCCACCACCACAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQEAVQKVSSLGYREDVSLHPAG*PTTTVP Trigger: AGGAACTGTGGTGGTGGGCCACCCTGCTGGATGCAG...AGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTGTACTGCTTCCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTGTAAGGAAGGTTGCGACAGCCACATGGACCTaGCCTTTCCAGAGCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QKVSSLGYREDVSVRKVATATWT*PFQSAS Trigger: TGAAGCGCTCTGGAAAGGCCAGGTCCATGTGGCTGT...CGCAACCTTCCTTACAGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| 3UTR CAA 72 bp | GAAAGTAAACACCAGACTCACAAGCTCAGACCGAGTTaGACTTTAGAAACAAGTGCAGAGCCTCGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESKHQTHKLRPS*TLETSAEPRAE Trigger: CTCTGCCCGAGGCTCTGCACTTGTTTCTAAAGTCAAACTCGGTCTGAGCTTGTGAGTCTGGTGTTTACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTGTAAGGAAGGTTGCGAAGGGCTCAGTTTTGTaGTTCCAGCAGGGCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: QKVSSLGYREDVSVRKVAKGSVL*FQQGMD Trigger: GTCCATGCCCTGCTGGAAGCACAAAACTGAGCCCTT...CGCAACCTTCCTTACAGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | AACTCTGTAGACCAGGCTGCTCCCAAACACACAGATATACCTGAATCTGCTTCATGGAAGGTGTGCTGGTaGAGGAGATTGTCTCTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: NSVDQAAPKHTDIPESASWKVCW*RRLSLE Trigger: CTCTAGAGACAATCTCCTGCACCAGCACACCTTCCA...TGAAGCAGATTCAGGTATATCTGTGTGTTTGGGAGCAGCCTGGTCTACAGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | AACTCTGTAGACCAGGCTGCTCCCAAACACACAGATATACCTGAATCTGCTTCAATTCCAGGTAGCACATaGCCTCAGCAACCTGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: NSVDQAAPKHTDIPESASIPGST*PQQPVM Trigger: CATCACAGGTTGCTGAGGGCATGTGCTACCTGGAAT...TGAAGCAGATTCAGGTATATCTGTGTGTTTGGGAGCAGCCTGGTCTACAGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTGTAAGGAAGGTTGCGTACAGTGACAGGATGTaGTTGTGCCGCAGCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKVSSLGYREDVSVRKVAYSDRM*LCRSFF Trigger: GAAGAAGCTGCGGCACAAGCACATCCTGTCACTGTA...CGCAACCTTCCTTACAGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | CTTGACAAAACGCAGTATTTGAGGTATGTTTGGTATGTTTCCTATCCCTTCATCGACAGCTGTAGGCCATaGGACAGGCTCTGGGTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LDKTQYLRYVWYVSYPFIDSCRP*DRLWVL Trigger: TAAGACCCAGAGCCTGTCTCATGGCCTACAGCTGTC...GATGAAGGGATAGGAAACATACCAAACATACCTCAAATACTGCGTTTTGTCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | TCTACAAACAGCCAAATGTACACGGTCCCTATAGCTTTAATTTTAGAACGTTTACGCCACAGCGTACAGTaGCAGGATGTGCTTGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: STNSQMYTVPIALILERLRHSVQ*QDVLVP Trigger: CGGCACAAGCACATCCTGTCACTGTACGCTGTGGCG...TAAACGTTCTAAAATTAAAGCTATAGGGACCGTGTACATTTGGCTGTTTGTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| 3UTR CAA 72 bp | AAAAGAACTCCACAAGGCCTGTTGCCTAGACTCTTCTaGGCTTCTCTGTCACATGAAGTCTTCACAGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRTPQGLLPRLF*ASLSHEVFTGE Trigger: TTCTCCTGTGAAGACTTCATGTGACAGAGAAGCCAAGAAGAGTCTAGGCAACAGGCCTTGTGGAGTTCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR TCA 90 bp | TTACAGGAAGCAGTACAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTTCTCACACAGGTCTTTaGAGCAAGGTCTCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQEAVQKVSSLGYREDVSSHTGL*SKVSAW Trigger: CCAAGCAGAGACCTTGCTTCAAAGACCTGTGTGAGA...AGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTGTACTGCTTCCTGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR GCA 90 bp | TCTACAAACAGCCAAATGTACACGGTCCCTATAGCTTTAATTTTAGAACGTTTACTCCTCATCTGTCCGTaGCTTGAAGTCCCAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STNSQMYTVPIALILERLLLICP*LEVPEA Trigger: GGCCTCTGGGACTTCAAGGCACGGACAGATGAGGAG...TAAACGTTCTAAAATTAAAGCTATAGGGACCGTGTACATTTGGCTGTTTGTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| 3UTR CAA 72 bp | GAGCCTCTTTACTCTTTCCTTGACAAAACGCAGTATTaGAGGTATGTTTGGTATGTTTCCTATCCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EPLYSFLDKTQY*RYVWYVSYPFI Trigger: GATGAAGGGATAGGAAACATACCAAACATACCTCAAATACTGCGTTTTGTCAAGGAAAGAGTAAAGAGGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS GCA 90 bp | TCTCAGCCAGGTAGTTGTGAGGCACATAGCCCTCAGCCAAGGCCTTaGCTTCTGCATCCAGCAGGGTGGCCCACCACCACAGTTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SQPGSCEAHSPQPRP*LLHPAGWPTTTVPP Trigger: AGGAGGAACTGTGGTGGTGGGCCACCCTGCTGGATGCAGAAGGCAAGGCCTTGGCTGAGGGCTATGTGCCTCACAACTACCTGGCTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS TCA 90 bp | GGCACCCTTCGAGTTGTCCTCAGCCTGCAGCCTGTGCATGGCCTCTaGGCGGGAGATGCAACCAAAGAACCACGGTTCAGACTCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: GTLRVVLSLQPVHGL*AGDATKEPRFRLHS Trigger: ACTGTGGAGTCTGAACCGTGGTTCTTTGGTTGCATCTCCCGCTCAGAGGCCATGCACAGGCTGCAGGCTGAGGACAACTCGAAGGGTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS GCA 90 bp | CAGGTAGTTGTGAGGCACATAGCCCTCAGCCAAGGCCTTGCCTTCTaGATCCAGCAGGGTGGCCCACCACCACAGTTCCTCCTTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QVVVRHIALSQGLAF*IQQGGPPPQFLLLG Trigger: ACCAAGAAGGAGGAACTGTGGTGGTGGGCCACCCTGCTGGATGCAGAAGGCAAGGCCTTGGCTGAGGGCTATGTGCCTCACAACTACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS CCA 90 bp | TCGCACGGCCTGAGCATCCCGGACAGAGAGGACATAGTCTGCTCCTaGCTTCTGGCTGACTCTGATCAGGAAGGCACCCTTCGAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SHGLSIPDREDIVCS*LLADSDQEGTLRVV Trigger: GACAACTCGAAGGGTGCCTTCCTGATCAGAGTCAGCCAGAAGCCAGGAGCAGACTATGTCCTCTCTGTCCGGGATGCTCAGGCCGTGCGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS GCA 90 bp | ATGGAGGAGGTCTCCTGCCTGAAAGCTCAGCTCCTCATCTGTCCGTaGCTTGAAGTCCCAGAGGCCCACATACTTAGGACCCAGGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MEEVSCLKAQLLICP*LEVPEAHILRTQVS Trigger: GCTCACCTGGGTCCTAAGTATGTGGGCCTCTGGGACTTCAAGGCACGGACAGATGAGGAGCTGAGCTTTCAGGCAGGAGACCTCCTCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS GCA 90 bp | TGGCTGACTCTGATCAGGAAGGCACCCTTCGAGTTGTCCTCAGCCTaGAGCCTGTGCATGGCCTCTGAGCGGGAGATGCAACCAAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WLTLIRKAPFELSSA*SLCMASEREMQPKN Trigger: GTTCTTTGGTTGCATCTCCCGCTCAGAGGCCATGCACAGGCTGCAGGCTGAGGACAACTCGAAGGGTGCCTTCCTGATCAGAGTCAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS GCA 90 bp | GTAATGTCGCACGGCCTGAGCATCCCGGACAGAGAGGACATAGTCTaGTCCTGGCTTCTGGCTGACTCTGATCAGGAAGGCACCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: VMSHGLSIPDREDIV*SWLLADSDQEGTLR Trigger: TCGAAGGGTGCCTTCCTGATCAGAGTCAGCCAGAAGCCAGGAGCAGACTATGTCCTCTCTGTCCGGGATGCTCAGGCCGTGCGACATTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS CCA 90 bp | TCAGGAAGGCACCCTTCGAGTTGTCCTCAGCCTGCAGCCTGTGCATaGCCTCTGAGCGGGAGATGCAACCAAAGAACCACGGTTCAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SGRHPSSCPQPAACA*PLSGRCNQRTTVQT Trigger: AGTCTGAACCGTGGTTCTTTGGTTGCATCTCCCGCTCAGAGGCCATGCACAGGCTGCAGGCTGAGGACAACTCGAAGGGTGCCTTCCTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS CCA 90 bp | CATCCCAGTGGGGCAAGGGCTCAGTTTTGTGCTTCCAGCAGGGCATaGACAGCTGTAGGCCATGAGACAGGCTCTGGGTCTTATGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HPSGARAQFCASSRA*TAVGHETGSGSYGS Trigger: ACTACCATAAGACCCAGAGCCTGTCTCATGGCCTACAGCTGTCCATGCCCTGCTGGAAGCACAAAACTGAGCCCTTGCCCCACTGGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS GCA 90 bp | CCACCACCACAGTTCCTCCTTCTTGGTAACATGGAGGAGGTCTCCTaGCTGAAAGCTCAGCTCCTCATCTGTCCGTGCCTTGAAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PPPQFLLLGNMEEVS*LKAQLLICPCLEVP Trigger: TGGGACTTCAAGGCACGGACAGATGAGGAGCTGAGCTTTCAGGCAGGAGACCTCCTCCATGTTACCAAGAAGGAGGAACTGTGGTGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS CCA 90 bp | GAGACAGGCTCTGGGTCTTATGGTAGTCCACAAGCTCAGACAGATTaGAGAAGGATACCGCCTCATTCAGGTGCAGCCGGCCCTCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ETGSGSYGSPQAQTD*RRIPPHSGAAGPRC Trigger: ACAACGAGGGCCGGCTGCACCTGAATGAGGCGGTATCCTTCTCCAATCTGTCTGAGCTTGTGGACTACCATAAGACCCAGAGCCTGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS CCA 90 bp | CCACAGCGTACAGTGACAGGATGTGCTTGTGCCGCAGCTTCTTCATaGCCTGAATCTCAGCCTGGAAGGTGTGCTGGTGCAGGAGATTGT | + |
|
Preference number: 5 (lower is better) Translates to: PQRTVTGCACAAASS*PESQPGRCAGAGDC Trigger: ACAATCTCCTGCACCAGCACACCTTCCAGGCTGAGATTCAGGCCATGAAGAAGCTGCGGCACAAGCACATCCTGTCACTGTACGCTGTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CAA 90 bp | GAGCTGCCTCTGCCCACATGGTTAAGAATCCTGGCTCTGCCAGGCAACAACAGTATCAGCTTGTGTATGTaGGGTGGGCACTCCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: ELPLPTWLRILALPGNNSISLCM*GGHSRG Trigger: CCCTCTGGAGTGCCCACCCAACATACACAAGCTGAT...ACTGTTGTTGCCTGGCAGAGCCAGGATTCTTAACCATGTGGGCAGAGGCAGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS TCA 90 bp | GCGTACAGTGACAGGATGTGCTTGTGCCGCAGCTTCTTCATGGCCTaGATCTCAGCCTGGAAGGTGTGCTGGTGCAGGAGATTGTCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: AYSDRMCLCRSFFMA*ISAWKVCWCRRLSL Trigger: TAGAGACAATCTCCTGCACCAGCACACCTTCCAGGCTGAGATTCAGGCCATGAAGAAGCTGCGGCACAAGCACATCCTGTCACTGTACGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
||
| CDS-3UTR CAA 90 bp | ACGACGTTACATCCCAGAGAGCTGCTTTACAGGAAGCAGTACAGAAAGTGTCATCCCTCAGCCAAGGCCTaGCCTTCTGCATCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TTLHPRELLYRKQYRKCHPSAKA*PSASSR Trigger: CCTGCTGGATGCAGAAGGCAAGGCCTTGGCTGAGGG...ATGACACTTTCTGTACTGCTTCCTGTAAAGCAGCTCTCTGGGATGTAACGTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR CAA 90 bp | AACTCGGGTCCAAATGGGAATCAGAGGATGGCACAGGATATAAGGGTATCCTGCGGCAAGGGCTCAGTTTaGTGCTTCCAGCAGGGCATG | + |
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Preference number: 5 (lower is better) Translates to: NSGPNGNQRMAQDIRVSCGKGSV*CFQQGM Trigger: CATGCCCTGCTGGAAGCACAAAACTGAGCCCTTGCC...GCAGGATACCCTTATATCCTGTGCCATCCTCTGATTCCCATTTGGACCCGAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 90 bp | AAAAGACCAGACATCAGACTTGATGGAGTAATGCCCTCGGGAAAGTaGCTCAGGTGCTGTCCATTTGTAGGGGACATTGTGCTCATGGGA | + |
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Preference number: 5 (lower is better) Translates to: KRPDIRLDGVMPSGK*LRCCPFVGDIVLMG Trigger: TCCCATGAGCACAATGTCCCCTACAAATGGACAGCACCTGAGGCACTTTCCCGAGGGCATTACTCCATCAAGTCTGATGTCTGGTCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR CAA 90 bp | TCTGCCTACCTCTGTCTCTCAAGTGCTAGGATTAAAGATGTGCACCACCAAGCCCACAGTTCCTCCTTCTaGGTAACATGGAGGAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SAYLCLSSARIKDVHHQAHSSSF*VTWRRS Trigger: AGACCTCCTCCATGTTACCAAGAAGGAGGAACTGTG...GGCTTGGTGGTGCACATCTTTAATCCTAGCACTTGAGAGACAGAGGTAGGCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 90 bp | GTCCCCCACTTTGCAGAGATTGTTCTCTGTAACAAGAACGTTCCTTaGAGCCAGGTCACGGTGGATGTAATTCTGAGATTCCAGGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: VPHFAEIVLCNKNVP*SQVTVDVILRFQVA Trigger: TGCTACCTGGAATCTCAGAATTACATCCACCGTGACCTGGCTGCAAGGAACGTTCTTGTTACAGAGAACAATCTCTGCAAAGTGGGGGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR CAA 90 bp | AACTCGGGTCCAAATGGGAATCAGAGGATGGCACAGGATATAAGGGTATCCTGCCCAAAGTCCCCCACTTaGCAGAGATTGTTCTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: NSGPNGNQRMAQDIRVSCPKSPT*QRLFSV Trigger: TACAGAGAACAATCTCTGCAAAGTGGGGGACTTTGG...GCAGGATACCCTTATATCCTGTGCCATCCTCTGATTCCCATTTGGACCCGAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR CAA 90 bp | CTGTTGCCTAGACTCTTCTTGGCTTCTCTGTCACATGAAGTCTTCACAGGAGAATTCTCACACAGGTCTTaGAAGCAAGGTCTCTGCTTG | + |
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Preference number: 5 (lower is better) Translates to: LLPRLFLASLSHEVFTGEFSHRS*KQGLCL Trigger: CAAGCAGAGACCTTGCTTCAAAGACCTGTGTGAGAA...TTCTCCTGTGAAGACTTCATGTGACAGAGAAGCCAAGAAGAGTCTAGGCAACAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR CAA 90 bp | AAAAAGGGAAAGGAGCCTCTTTACTCTTTCCTTGACAAAACGCAGTATTTGAGGAGTGACAGGATGTGCTaGTGCCGCAGCTTCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: KKGKEPLYSFLDKTQYLRSDRMC*CRSFFM Trigger: CATGAAGAAGCTGCGGCACAAGCACATCCTGTCACT...CCTCAAATACTGCGTTTTGTCAAGGAAAGAGTAAAGAGGCTCCTTTCCCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR CAA 90 bp | AAAAAGGGAAAGGAGCCTCTTTACTCTTTCCTTGACAAAACGCAGTATTTGAGGTGCTGGTGCAGGAGATaGTCTCTAGAGATCACCTTC | + |
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Preference number: 5 (lower is better) Translates to: KKGKEPLYSFLDKTQYLRCWCRR*SLEITF Trigger: GAAGGTGATCTCTAGAGACAATCTCCTGCACCAGCA...CCTCAAATACTGCGTTTTGTCAAGGAAAGAGTAAAGAGGCTCCTTTCCCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS-3UTR CAA 90 bp | TTACAGGAAGCAGTACAGAAAGTGTCATCTCTAGGATACAGAGAGGATGTTTCTCCCACTTTGCAGAGATaGTTCTCTGTAACAAGAACG | + |
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Preference number: 5 (lower is better) Translates to: LQEAVQKVSSLGYREDVSPTLQR*FSVTRT Trigger: CGTTCTTGTTACAGAGAACAATCTCTGCAAAGTGGG...AGAAACATCCTCTCTGTATCCTAGAGATGACACTTTCTGTACTGCTTCCTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | GTGAGGCACATAGCCCTCAGCCAAGGCCTTGCCTTCTaGATCCAGCAGGGTGGCCCACCACCACAGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: VRHIALSQGLAF*IQQGGPPPQFL Trigger: GAGGAACTGTGGTGGTGGGCCACCCTGCTGGATGCAGAAGGCAAGGCCTTGGCTGAGGGCTATGTGCCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS TCA 72 bp | GTAGACCGGGTCCCCTGCAGTCGCCACAGCGTACAGTaGCAGGATGTGCTTGTGCCGCAGCTTCTTCATGGC | + |
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Preference number: 6 (lower is better) Translates to: VDRVPCSRHSVQ*QDVLVPQLLHG Trigger: GCCATGAAGAAGCTGCGGCACAAGCACATCCTGTCACTGTACGCTGTGGCGACTGCAGGGGACCCGGTCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | GGTAGTTGTGAGGCACATAGCCCTCAGCCAAGGCCTTaGCTTCTGCATCCAGCAGGGTGGCCCACCACCACA | + |
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Preference number: 6 (lower is better) Translates to: GSCEAHSPQPRP*LLHPAGWPTTT Trigger: TGTGGTGGTGGGCCACCCTGCTGGATGCAGAAGGCAAGGCCTTGGCTGAGGGCTATGTGCCTCACAACTACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | CACGGCCTGAGCATCCCGGACAGAGAGGACATAGTCTaGTCCTGGCTTCTGGCTGACTCTGATCAGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HGLSIPDREDIV*SWLLADSDQEG Trigger: GCCTTCCTGATCAGAGTCAGCCAGAAGCCAGGAGCAGACTATGTCCTCTCTGTCCGGGATGCTCAGGCCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS CCA 72 bp | CACCCTTCGAGTTGTCCTCAGCCTGCAGCCTGTGCATaGCCTCTGAGCGGGAGATGCAACCAAAGAACCACG | + |
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Preference number: 6 (lower is better) Translates to: HPSSCPQPAACA*PLSGRCNQRTT Trigger: CGTGGTTCTTTGGTTGCATCTCCCGCTCAGAGGCCATGCACAGGCTGCAGGCTGAGGACAACTCGAAGGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS CCA 72 bp | GGGGCAAGGGCTCAGTTTTGTGCTTCCAGCAGGGCATaGACAGCTGTAGGCCATGAGACAGGCTCTGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GARAQFCASSRA*TAVGHETGSGS Trigger: AGACCCAGAGCCTGTCTCATGGCCTACAGCTGTCCATGCCCTGCTGGAAGCACAAAACTGAGCCCTTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | GTCTCCTGCCTGAAAGCTCAGCTCCTCATCTGTCCGTaGCTTGAAGTCCCAGAGGCCCACATACTTAGGACC | + |
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Preference number: 6 (lower is better) Translates to: VSCLKAQLLICP*LEVPEAHILRT Trigger: GGTCCTAAGTATGTGGGCCTCTGGGACTTCAAGGCACGGACAGATGAGGAGCTGAGCTTTCAGGCAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS TCA 72 bp | TCCTCCTTCTTGGTAACATGGAGGAGGTCTCCTGCCTaGAAGCTCAGCTCCTCATCTGTCCGTGCCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SSFLVTWRRSPA*KLSSSSVRALK Trigger: CTTCAAGGCACGGACAGATGAGGAGCTGAGCTTTCAGGCAGGAGACCTCCTCCATGTTACCAAGAAGGAGGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS TCA 72 bp | GGACATTGTGCTCATGGGAAAGGTAGATGTCCTCCTTaGCAAGCCTGGCAAGCCCAAAGTCCCCCACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GHCAHGKGRCPP*QAWQAQSPPLC Trigger: GCAAAGTGGGGGACTTTGGGCTTGCCAGGCTTGTCAAGGAGGACATCTACCTTTCCCATGAGCACAATGTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | GTGAGTTTCTCACACAGGTCTTTGAAGCAAGGTCTCTaGTTGGGGTCTCTGCTCCAGCAGCTGAGCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: VSFSHRSLKQGL*LGSLLQQLSIS Trigger: GCTGATGCTCAGCTGCTGGAGCAGAGACCCCAAGCAGAGACCTTGCTTCAAAGACCTGTGTGAGAAACTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS CCA 72 bp | TCTGGGTCTTATGGTAGTCCACAAGCTCAGACAGATTaGAGAAGGATACCGCCTCATTCAGGTGCAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: SGSYGSPQAQTD*RRIPPHSGAAG Trigger: GCCGGCTGCACCTGAATGAGGCGGTATCCTTCTCCAATCTGTCTGAGCTTGTGGACTACCATAAGACCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | CTTGATGGAGTAATGCCCTCGGGAAAGTGCCTCAGGTaGTGTCCATTTGTAGGGGACATTGTGCTCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: LDGVMPSGKCLR*CPFVGDIVLMG Trigger: TCCCATGAGCACAATGTCCCCTACAAATGGACAGCACCTGAGGCACTTTCCCGAGGGCATTACTCCATCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS CCA 72 bp | TTGTCTCTAGAGATCACCTTCACAGCCACATGGACCTaGCCTTTCCAGAGCGCTTCAAAGACCTCCCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: LSLEITFTATWT*PFQSASKTSPK Trigger: CTTTGGGGAGGTCTTTGAAGCGCTCTGGAAAGGCCAGGTCCATGTGGCTGTGAAGGTGATCTCTAGAGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS CCA 72 bp | AGGAGATTGTCTCTAGAGATCACCTTCACAGCCACATaGACCTGGCCTTTCCAGAGCGCTTCAAAGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: RRLSLEITFTAT*TWPFQSASKTS Trigger: GGAGGTCTTTGAAGCGCTCTGGAAAGGCCAGGTCCATGTGGCTGTGAAGGTGATCTCTAGAGACAATCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS CAA 90 bp | AGGTTCTCATACCTGGTGATACCTGTGAGTTTCTCACACAGGTCTTaGAAGCAAGGTCTCTGCTTGGGGTCTCTGCTCCAGCAGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: RFSYLVIPVSFSHRS*KQGLCLGSLLQQLS Trigger: GCTCAGCTGCTGGAGCAGAGACCCCAAGCAGAGACCTTGCTTCAAAGACCTGTGTGAGAAACTCACAGGTATCACCAGGTATGAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | CACGGTGGATGTAATTCTGAGATTCCAGGTAGCACATaGCCTCAGCAACCTGTGATGCAAAGTCCACCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HGGCNSEIPGST*PQQPVMQSPPA Trigger: AGCTGGTGGACTTTGCATCACAGGTTGCTGAGGGCATGTGCTACCTGGAATCTCAGAATTACATCCACCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS TCA 72 bp | GATTGGACATGCCTGGGTAGGGCATCTGCCCCCTGCTaGAAATTTCATGAAGAAGAACTCCAAAAGACCAGA | + |
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Preference number: 6 (lower is better) Translates to: DWTCLGRASAPC*KFHEEELQKTR Trigger: TCTGGTCTTTTGGAGTTCTTCTTCATGAAATTTTCAGCAGGGGGCAGATGCCCTACCCAGGCATGTCCAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS CAA 72 bp | TCCTTGACAAGCCTGGCAAGCCCAAAGTCCCCCACTTaGCAGAGATTGTTCTCTGTAACAAGAACGTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: SLTSLASPKSPT*QRLFSVTRTFL Trigger: AAGGAACGTTCTTGTTACAGAGAACAATCTCTGCAAAGTGGGGGACTTTGGGCTTGCCAGGCTTGTCAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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| CDS GCA 72 bp | TTTGCAGAGATTGTTCTCTGTAACAAGAACGTTCCTTaGAGCCAGGTCACGGTGGATGTAATTCTGAGATTC | + |
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Preference number: 6 (lower is better) Translates to: FAEIVLCNKNVP*SQVTVDVILRF Trigger: GAATCTCAGAATTACATCCACCGTGACCTGGCTGCAAGGAACGTTCTTGTTACAGAGAACAATCTCTGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000016511.6 |
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