Pregenerated sensors for PTH2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038300

Ensembl transcript IDs: ENSMUST00000042754.7, ENSMUST00000210086.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	GGCGCGCGCGCTCCCGAAAGGCCGCGTCGTCAGCTAGCGCCAGGCTaGGCCGAGACAGGGGGCTACCCAAGCCCGCCCAGGCACGACCCG	+
Preference number: 5 (lower is better) Translates to: GARAPERPRRQLAPG*AETGGYPSPPRHDP Trigger: CGGGTCGTGCCTGGGCGGGCTTGGGTAGCCCCCTGTCTCGGCGCAGCCTGGCGCTAGCTGACGACGCGGCCTTTCGGGAGCGCGCGCGCC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042754.7 ENSMUST00000210086.2
CDS TCA 72 bp	CCAAGCCCGCCCAGGCACGACCCGGGGCGCGGAGGCTaGACACACCAGCGAGGGGCAGGGCAACACCTGAGG	+
Preference number: 6 (lower is better) Translates to: PSPPRHDPGRGG*THQRGAGQHLR Trigger: CCTCAGGTGTTGCCCTGCCCCTCGCTGGTGTGTTCAGCCTCCGCGCCCCGGGTCGTGCCTGGGCGGGCTTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042754.7 ENSMUST00000210086.2
CDS GCA 72 bp	GCTCCCGAAAGGCCGCGTCGTCAGCTAGCGCCAGGCTaGGCCGAGACAGGGGGCTACCCAAGCCCGCCCAGG	+
Preference number: 6 (lower is better) Translates to: APERPRRQLAPG*AETGGYPSPPR Trigger: CCTGGGCGGGCTTGGGTAGCCCCCTGTCTCGGCGCAGCCTGGCGCTAGCTGACGACGCGGCCTTTCGGGAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042754.7 ENSMUST00000210086.2
CDS CCA 72 bp	AGCAGCAACAGCCGCTCTCGGGGGCTCCTGGACATCTaGCAGGTCTCCATCACCTGTGGATACAGGGGCCAG	+
Preference number: 6 (lower is better) Translates to: SSNSRSRGLLDI*QVSITCGYRGQ Trigger: CTGGCCCCTGTATCCACAGGTGATGGAGACCTGCCAGATGTCCAGGAGCCCCCGAGAGCGGCTGTTGCTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210086.2
CDS CCA 72 bp	GCAGCAAAAGCAGCAACAGCCGCTCTCGGGGGCTCCTaGACATCTGGCAGGTCTCCATCACCTGTGGATACA	+
Preference number: 6 (lower is better) Translates to: AAKAATAALGGS*TSGRSPSPVDT Trigger: TGTATCCACAGGTGATGGAGACCTGCCAGATGTCCAGGAGCCCCCGAGAGCGGCTGTTGCTGCTTTTGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210086.2

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