Pregenerated sensors for PTH1R (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032492Ensembl transcript IDs: ENSMUST00000006005.12, ENSMUST00000166716.8, ENSMUST00000196057.2, ENSMUST00000198865.5, ENSMUST00000199791.2, ENSMUST00000199862.5
Found 203 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTaGCTTCTTGGTCCATCTGTCCATCTGCCCATGCCAGCAGTCCAG | + |
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Preference number: 1 (lower is better) Translates to: FCLPGPVLNRQPAKL*LLGPSVHLPMPAVQ Trigger: CTGGACTGCTGGCATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTGTCCATCTGCCCATaGCAGCAGTCCAGCCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKLSICP*QQSSPL Trigger: CAAGGGGCTGGACTGCTGGCATGGGCAGATGGACAG...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| 3UTR CCA 72 bp | CCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTaGCTTCTTGGTCCATCTGTCCATCTGCCCATGCCA | + |
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Preference number: 3 (lower is better) Translates to: PGPVLNRQPAKL*LLGPSVHLPMP Trigger: TGGCATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGAGCGCCAGGCTGGGTaGGATCCGGGCGGTCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLERQAG*DPGGPH Trigger: ATGGGGACCGCCCGGATCGCACCCAGCCTGGCGCTC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGAAGGAGCGCCAGGCTaGGTGCGATCCGGGCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMEGAPG*VRSGRS Trigger: GGACCGCCCGGATCGCACCCAGCCTGGCGCTCCTTC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGAGCGCCAGGCTGGGTaGGATCCGGGCGGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWERQAG*DPGGPH Trigger: ATGGGGACCGCCCGGATCGCACCCAGCCTGGCGCTC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGAAGGAGCGCCAGGCTaGGTGCGATCCGGGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWEGAPG*VRSGRS Trigger: GGACCGCCCGGATCGCACCCAGCCTGGCGCTCCTTC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGCGTCCGGTTGTGCCCTaGAACCACCTCCCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMRPVVP*NHLPAA Trigger: GGCAGCTGGGAGGTGGTTCCAGGGCACAACCGGACG...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCGTCCGGTTGTGCCCTaGAACCACCTCCCAGCTGCC | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLRPVVP*NHLPAA Trigger: GGCAGCTGGGAGGTGGTTCCAGGGCACAACCGGACG...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGAGTGGCCATTGGTGGTaGCAGGAAGCAGGCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMSGHWW*QEAGGG Trigger: GCCCCCGCCTGCTTCCTGCCACCACCAATGGCCACT...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGAGTGGCCATTGGTGGTaGCAGGAAGCAGGCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLSGHWW*QEAGGG Trigger: GCCCCCGCCTGCTTCCTGCCACCACCAATGGCCACT...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGGGAGTGGCCATTGGTaGTGGCAGGAAGCAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLGSGHW*WQEAGG Trigger: CCCGCCTGCTTCCTGCCACCACCAATGGCCACTCCC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGCGTGGCCAGGCAGCTaGGAGTGGCCATTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLAWPGS*EWPLVV Trigger: CACCACCAATGGCCACTCCCAGCTGCCTGGCCACGC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTGCGGAGCTGAGCACTaGGCAGCAGAGAAGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMCGAEH*AAEKER Trigger: GCGCTCCTTCTCTGCTGCCCAGTGCTCAGCTCCGCA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGGCACTCGCTGTAGTTaGCCCACGTCCGGTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLGTRCS*PTSGCA Trigger: GGCACAACCGGACGTGGGCCAACTACAGCGAGTGCC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGGCACTCGCTGTAGTTaGCCCACGTCCGGTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMGTRCS*PTSGCA Trigger: GGCACAACCGGACGTGGGCCAACTACAGCGAGTGCC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTCCGGTACTGCTGCCTaGTGTCACACCGGCCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLSGTAA*CHTGPH Trigger: ATGCGGGCCGGTGTGACACCAGGCAGCAGTACCGGA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTCCGGTACTGCTGCCTaGTGTCACACCGGCCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMSGTAA*CHTGPH Trigger: ATGCGGGCCGGTGTGACACCAGGCAGCAGTACCGGA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGCTGGGAGTGGCCATTaGTGGTGGCAGGAAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMAGSGH*WWQEAG Trigger: GCCTGCTTCCTGCCACCACCAATGGCCACTCCCAGC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGCTGGGAGTGGCCATTaGTGGTGGCAGGAAGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLAGSGH*WWQEAG Trigger: GCCTGCTTCCTGCCACCACCAATGGCCACTCCCAGC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGCCAGGCAGCTGGGAGTaGCCATTGGTGGTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMPGSWE*PLVVAG Trigger: TCCTGCCACCACCAATGGCCACTCCCAGCTGCCTGG...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGCGCATATGCGGAGCTaGGCACTGGGCAGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMAHMRS*ALGSRE Trigger: TTCTCTGCTGCCCAGTGCTCAGCTCCGCATATGCGC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGCGCATATGCGGAGCTaGGCACTGGGCAGCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLAHMRS*ALGSRE Trigger: TTCTCTGCTGCCCAGTGCTCAGCTCCGCATATGCGC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCGGCCTCATCCAGCGTaGAGCCAGAGTAGAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLRPHPA*SQSRAQ Trigger: CTGTGCTCTACTCTGGCTTCACGCTGGATGAGGCCG...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGCGGCCTCATCCAGCGTaGAGCCAGAGTAGAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMRPHPA*SQSRAQ Trigger: CTGTGCTCTACTCTGGCTTCACGCTGGATGAGGCCG...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTGGCCAAGGTTGCTCTaGCACCGACCCACACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMWPRLL*HRPTQP Trigger: TGGCTGTGTGGGTCGGTGTCAGAGCAACCTTGGCCA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTGGCCAAGGTTGCTCTaGCACCGACCCACACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLWPRLL*HRPTQP Trigger: TGGCTGTGTGGGTCGGTGTCAGAGCAACCTTGGCCA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCTGCCACAGTGTCCCTaGGACCTCGGTGTACGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLLPQCP*DLGVRQ Trigger: TTGCCGTACACCGAGGTCTCAGGGACACTGTGGCAG...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGTCCACCAGCGCATATaGGGAGCTGAGCACTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLVHQRI*GAEHWA Trigger: TGCCCAGTGCTCAGCTCCGCATATGCGCTGGTGGAC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGTCCACCAGCGCATATaGGGAGCTGAGCACTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMVHQRI*GAEHWA Trigger: TGCCCAGTGCTCAGCTCCGCATATGCGCTGGTGGAC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGATGTTGTCCCACTCTaGCAGACAGGGACGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLDVVPL*QTGTPS Trigger: CGAGGGCGTCCCTGTCTGCCAGAGTGGGACAACATC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGGGAGTGGCCATTGGTaGTGGCAGGAAGCAGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWGSGHW*WQEAGG Trigger: CCCGCCTGCTTCCTGCCACCACCAATGGCCACTCCC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGCGTGGCCAGGCAGCTaGGAGTGGCCATTGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWAWPGS*EWPLVV Trigger: CACCACCAATGGCCACTCCCAGCTGCCTGGCCACGC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGGATGGGCACCTGGATaGTCCACTTCTTGTGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMGWAPG*STSCAQ Trigger: CTGGGCACAAGAAGTGGATCATCCAGGTGCCCATCC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGCACCACTTCACCTGGTaGCCCCAATGGCCAGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMHHFTW*PQWPAN Trigger: GTTTGCTGGCCATTGGGGGCACCAGGTGAAGTGGTG...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGCCTCCCAGCTGCCATTaGGGTCGCAGCGTCTGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWPPSCH*GRSVCR Trigger: CCTACAGACGCTGCGACCGCAATGGCAGCTGGGAGG...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGAGCTTCCGGTACTGCTaGCTGGTGTCACACCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSFRYC*LVSHRP Trigger: GGGCCGGTGTGACACCAGGCAGCAGTACCGGAAGCT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTGCGGAGCTGAGCACTaGGCAGCAGAGAAGGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWCGAEH*AAEKER Trigger: GCGCTCCTTCTCTGCTGCCCAGTGCTCAGCTCCGCA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTCCGGTACTGCTGCCTaGTGTCACACCGGCCCGCAT | + |
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Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSGTAA*CHTGPH Trigger: ATGCGGGCCGGTGTGACACCAGGCAGCAGTACCGGA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGCCAGGCAGCTGGGAGTaGCCATTGGTGGTGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWPGSWE*PLVVAG Trigger: TCCTGCCACCACCAATGGCCACTCCCAGCTGCCTGG...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR TCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGCTGCCACAGTGTCCCTaGGACCTCGGTGTACGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWLPQCP*DLGVRQ Trigger: TTGCCGTACACCGAGGTCTCAGGGACACTGTGGCAG...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGGTCACACTCGTGTGTaGCACCATTGGGCCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMGHTRV*HHWAIA Trigger: AGCTATGGCCCAATGGTGTCACACACGAGTGTGACC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGAGCAGCTTGTCACATTaGGCCTGGGCACGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSSLSH*AWARCS Trigger: GCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGAGTGTTGGCCAAGGTTaGTCTGACACCGACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLSVGQG*SDTDPH Trigger: GTGTGGGTCGGTGTCAGAGCAACCTTGGCCAACACT...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTTGTCACATTGCGCCTaGGCACGGTGCAGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMLSHCA*ARCSRK Trigger: TTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGATGTTGTCCCACTCTaGCAGACAGGGACGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWDVVPL*QTGTPS Trigger: CGAGGGCGTCCCTGTCTGCCAGAGTGGGACAACATC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGCCAGGATGGGCACCTaGATGATCCACTTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLARMGT*MIHFLC Trigger: GCACAAGAAGTGGATCATCCAGGTGCCCATCCTGGC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAAGTGGCCATTGGTGGTaGCAGGAAGCAGGCGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKSGHWW*QEAGGG Trigger: GCCCCCGCCTGCTTCCTGCCACCACCAATGGCCACT...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGGATGGGCACCTGGATaGTCCACTTCTTGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWGWAPG*STSCAQ Trigger: CTGGGCACAAGAAGTGGATCATCCAGGTGCCCATCC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGCACCACTTCACCTGGTaGCCCCAATGGCCAGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWHHFTW*PQWPAN Trigger: GTTTGCTGGCCATTGGGGGCACCAGGTGAAGTGGTG...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCACGGTGTAGATCATaGCCAGGCGGTCAAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLPRCRS*PGGQIP Trigger: AGGTATTTGACCGCCTGGGCATGATCTACACCGTGG...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGATGATCCACTTCTTGTaGCCAGAGCTCAGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMMIHFL*PELRSQ Trigger: CTGGGACCTGAGCTCTGGGCACAAGAAGTGGATCAT...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGTTGAGCACAACAGATaGCAGGATGGGCACCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMVEHNR*QDGHLD Trigger: ATCCAGGTGCCCATCCTGGCATCTGTTGTGCTCAAC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGTTGAGCACAACAGATaGCAGGATGGGCACCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLVEHNR*QDGHLD Trigger: ATCCAGGTGCCCATCCTGGCATCTGTTGTGCTCAAC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAAGCTTCCGGTACTGCTaGCTGGTGTCACACCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKSFRYC*LVSHRP Trigger: GGGCCGGTGTGACACCAGGCAGCAGTACCGGAAGCT...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGGCCATAGCTGTAGCTaGTACTCCCACTTCGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLGHSCS*YSHFVL Trigger: AAGCACGAAGTGGGAGTAGCAGCTACAGCTATGGCC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGTTTCCCATTCTTCCTaGAACAATGGAGGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLVSHSS*NNGGGR Trigger: GCGGCCACCTCCATTGTTGCAGGAAGAATGGGAAAC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGTTTCCCATTCTTCCTaGAACAATGGAGGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMVSHSS*NNGGGR Trigger: GCGGCCACCTCCATTGTTGCAGGAAGAATGGGAAAC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAATGCGGAGCTGAGCACTaGGCAGCAGAGAAGGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKCGAEH*AAEKER Trigger: GCGCTCCTTCTCTGCTGCCCAGTGCTCAGCTCCGCA...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGCGCATATGCGGAGCTaGGCACTGGGCAGCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKAHMRS*ALGSRE Trigger: TTCTCTGCTGCCCAGTGCTCAGCTCCGCATATGCGC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAATGGCCAAGGTTGCTCTaGCACCGACCCACACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKWPRLL*HRPTQP Trigger: TGGCTGTGTGGGTCGGTGTCAGAGCAACCTTGGCCA...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTGCCACAGTGTCCCTaGGACCTCGGTGTACGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKLPQCP*DLGVRQ Trigger: TTGCCGTACACCGAGGTCTCAGGGACACTGTGGCAG...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTTCGTGCTTTACGCTTaGAGTCCAATGCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLFVLYA*SPMPVS Trigger: GGACACTGGCATTGGACTTCAAGCGTAAAGCACGAA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGGTCACACTCGTGTGTaGCACCATTGGGCCATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWGHTRV*HHWAIA Trigger: AGCTATGGCCCAATGGTGTCACACACGAGTGTGACC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGTCCACCAGCGCATATaGGGAGCTGAGCACTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKVHQRI*GAEHWA Trigger: TGCCCAGTGCTCAGCTCCGCATATGCGCTGGTGGAC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAAGCAGCTTGTCACATTaGGCCTGGGCACGGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKSSLSH*AWARCS Trigger: GCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCT...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGATGTTGGCTGCTGTGTaGAGAACTTCCTTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLMLAAV*RTSLSS Trigger: GCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACAT...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGTAGAACTTTCCCGGTaGCTTCTCTTTCCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLVELSR*LLFPGL Trigger: AAGCCCAGGAAAGAGAAGGCACCGGGAAAGTTCTAC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGTAGAACTTTCCCGGTaGCTTCTCTTTCCTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMVELSR*LLFPGL Trigger: AAGCCCAGGAAAGAGAAGGCACCGGGAAAGTTCTAC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGAGTGTTGGCCAAGGTTaGTCTGACACCGACCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSVGQG*SDTDPH Trigger: GTGTGGGTCGGTGTCAGAGCAACCTTGGCCAACACT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTTGTCACATTGCGCCTaGGCACGGTGCAGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWLSHCA*ARCSRK Trigger: TTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGATGTTGTCCCACTCTaGCAGACAGGGACGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKDVVPL*QTGTPS Trigger: CGAGGGCGTCCCTGTCTGCCAGAGTGGGACAACATC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGACCTGGTGCCCCCAATaGCCAGCAAACGATGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWTWCPQ*PANDVV Trigger: GACAACATCGTTTGCTGGCCATTGGGGGCACCAGGT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGCCAGGATGGGCACCTaGATGATCCACTTCTTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWARMGT*MIHFLC Trigger: GCACAAGAAGTGGATCATCCAGGTGCCCATCCTGGC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGGATGGGCACCTGGATaGTCCACTTCTTGTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKGWAPG*STSCAQ Trigger: CTGGGCACAAGAAGTGGATCATCCAGGTGCCCATCC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGCCACGGTGTAGATCATaGCCAGGCGGTCAAATACCT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWPRCRS*PGGQIP Trigger: AGGTATTTGACCGCCTGGGCATGATCTACACCGTGG...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGATGATCCACTTCTTGTaGCCAGAGCTCAGGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWMIHFL*PELRSQ Trigger: CTGGGACCTGAGCTCTGGGCACAAGAAGTGGATCAT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGTTGAGCACAACAGATaGCAGGATGGGCACCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWVEHNR*QDGHLD Trigger: ATCCAGGTGCCCATCCTGGCATCTGTTGTGCTCAAC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGAGACTTCCTAATCTCTaGCTGCACCTCACCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMRLPNL*LHLTIA Trigger: TGCAATGGTGAGGTGCAGGCAGAGATTAGGAAGTCT...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGGCCATAGCTGTAGCTaGTACTCCCACTTCGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWGHSCS*YSHFVL Trigger: AAGCACGAAGTGGGAGTAGCAGCTACAGCTATGGCC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTGTGCAGAACTTCCTTaGGCAGCTTGTCACATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWCAELP*AACHIA Trigger: CGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTTCGTGCTTTACGCTTaGAGTCCAATGCCAGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWFVLYA*SPMPVS Trigger: GGACACTGGCATTGGACTTCAAGCGTAAAGCACGAA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGATGTTGGCTGCTGTGTaGAGAACTTCCTTGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWMLAAV*RTSLSS Trigger: GCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACAT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGCTCCATTATGTTGGCTaGTGTGTGCAGAACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMLHYVG*CVQNFL Trigger: AAGGAAGTTCTGCACACAGCAGCCAACATAATGGAG...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAATTGTCACATTGCGCCTaGGCACGGTGCAGCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKLSHCA*ARCSRK Trigger: TTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAA...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGGGAGGCAAGAGACATaGAATATCCCACGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWGRQET*NIPRCR Trigger: TCTACACCGTGGGATATTCCATGTCTCTTGCCTCCC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCATGGCCTTTGTGGTTaGAGTCATAAATGTAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLHGLCG*SHKCNR Trigger: CCGATTACATTTATGACTTCAACCACAAAGGCCATG...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGCATGGCCTTTGTGGTTaGAGTCATAAATGTAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMHGLCG*SHKCNR Trigger: CCGATTACATTTATGACTTCAACCACAAAGGCCATG...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGATCCCTGGAAGGAGTTaGAGAGCATCTCATAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWIPGRS*RASHSA Trigger: TGCACTATGAGATGCTCTTCAACTCCTTCCAGGGAT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGGCCATAGCTGTAGCTaGTACTCCCACTTCGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKGHSCS*YSHFVL Trigger: AAGCACGAAGTGGGAGTAGCAGCTACAGCTATGGCC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGTTTCCCATTCTTCCTaGAACAATGGAGGTGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKVSHSS*NNGGGR Trigger: GCGGCCACCTCCATTGTTGCAGGAAGAATGGGAAAC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAATGTGCAGAACTTCCTTaGGCAGCTTGTCACATTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKCAELP*AACHIA Trigger: CGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACA...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGCAGATACTTCTTCTCTaGGAAAAAGGCCATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMQILLL*EKGHED Trigger: ATCTTCATGGCCTTTTTCTCAGAGAAGAAGTATCTG...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGCTCCATTATGTTGGCTaGTGTGTGCAGAACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWLHYVG*CVQNFL Trigger: AAGGAAGTTCTGCACACAGCAGCCAACATAATGGAG...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGGGAGGCAAGAGACATaGAATATCCCACGGTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKGRQET*NIPRCR Trigger: TCTACACCGTGGGATATTCCATGTCTCTTGCCTCCC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAATCCCTGGAAGGAGTTaGAGAGCATCTCATAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKIPGRS*RASHSA Trigger: TGCACTATGAGATGCTCTTCAACTCCTTCCAGGGAT...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAAGACTTCCTAATCTCTaGCTGCACCTCACCATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKRLPNL*LHLTIA Trigger: TGCAATGGTGAGGTGCAGGCAGAGATTAGGAAGTCT...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGCAGATACTTCTTCTCTaGGAAAAAGGCCATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWQILLL*EKGHED Trigger: ATCTTCATGGCCTTTTTCTCAGAGAAGAAGTATCTG...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR GCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCCATTATGTTGGCTaGTGTGTGCAGAACTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKLHYVG*CVQNFL Trigger: AAGGAAGTTCTGCACACAGCAGCCAACATAATGGAG...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGAACTGTCATAGTAACTaGTATGGTTTCGTTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLNCHSN*YGFVLN Trigger: ATTGAGAACGAAACCATACCAGTTACTATGACAGTT...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR TCA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACATGGCCTTTGTGGTTaGAGTCATAAATGTAATCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKHGLCG*SHKCNR Trigger: CCGATTACATTTATGACTTCAACCACAAAGGCCATG...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGAACTGTCATAGTAACTaGTATGGTTTCGTTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWNCHSN*YGFVLN Trigger: ATTGAGAACGAAACCATACCAGTTACTATGACAGTT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CCA 90 bp | TTCACCTGGTGCCCCCAATGGCCAGCAAACGATGTTGTCCCACTCTaGCAGACAGGGACGCCCTCGGCGCCTGCTGCCGGTGGGCACATC | + |
|
Preference number: 5 (lower is better) Translates to: FTWCPQWPANDVVPL*QTGTPSAPAAGGHI Trigger: GATGTGCCCACCGGCAGCAGGCGCCGAGGGCGTCCCTGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCCATTGGGGGCACCAGGTGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS CCA 90 bp | AAAGACATCGTCTGCGTCCACCAGCGCATATGCGGAGCTGAGCACTaGGCAGCAGAGAAGGAGCGCCAGGCTGGGTGCGATCCGGGCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KDIVCVHQRICGAEH*AAEKERQAGCDPGG Trigger: ACCGCCCGGATCGCACCCAGCCTGGCGCTCCTTCTCTGCTGCCCAGTGCTCAGCTCCGCATATGCGCTGGTGGACGCAGACGATGTCTTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 |
||
| CDS CCA 90 bp | GAACTTGAGGCACTCGCTGTAGTTGGCCCACGTCCGGTTGTGCCCTaGAACCACCTCCCAGCTGCCATTGCGGTCGCAGCGTCTGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ELEALAVVGPRPVVP*NHLPAAIAVAASVG Trigger: GCCTACAGACGCTGCGACCGCAATGGCAGCTGGGAGGTGGTTCCAGGGCACAACCGGACGTGGGCCAACTACAGCGAGTGCCTCAAGTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS TCA 90 bp | CGGTGTAGTGGACACCGAAGAGTGGCACAAGCACCAACGTGGACCTaGGCAGCTTCCGGTACTGCTGCCTGGTGTCACACCGGCCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RCSGHRRVAQAPTWT*AASGTAAWCHTGPH Trigger: ATGCGGGCCGGTGTGACACCAGGCAGCAGTACCGGAAGCTGCTCAGGTCCACGTTGGTGCTTGTGCCACTCTTCGGTGTCCACTACACCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGCTGGAGCGCCCGGCTaGGCGTGGCCAGGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMAGAPG*AWPGSW Trigger: CCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CCA 90 bp | GTAATCGGGACAAGGTACTGCCACCACTTCACCTGGTGCCCCCAATaGCCAGCAAACGATGTTGTCCCACTCTGGCAGACAGGGACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VIGTRYCHHFTWCPQ*PANDVVPLWQTGTP Trigger: GGGCGTCCCTGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCCATTGGGGGCACCAGGTGAAGTGGTGGCAGTACCTTGTCCCGATTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGCTGGAGCGCCCGGCTaGGCGTGGCCAGGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWAGAPG*AWPGSW Trigger: CCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS TCA 90 bp | GGATCTGCCACAGTGTCCCTGAGACCTCGGTGTACGGCAAGGCCATaGAGACGGTGTAGTGGACACCGAAGAGTGGCACAAGCACCAACG | + |
|
Preference number: 5 (lower is better) Translates to: GSATVSLRPRCTARP*RRCSGHRRVAQAPT Trigger: CGTTGGTGCTTGTGCCACTCTTCGGTGTCCACTACACCGTCTTCATGGCCTTGCCGTACACCGAGGTCTCAGGGACACTGTGGCAGATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS TCA 90 bp | AAGGCTGAGTCCTGCACGGGGGCCCACATTGGTCACACTCGTGTGTaGCACCATTGGGCCATAGCTGTAGCTGCTACTCCCACTTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KAESCTGAHIGHTRV*HHWAIAVAATPTSC Trigger: GCACGAAGTGGGAGTAGCAGCTACAGCTATGGCCCAATGGTGTCACACACGAGTGTGACCAATGTGGGCCCCCGTGCAGGACTCAGCCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CCA 90 bp | GGTGTACGGCAAGGCCATGAAGACGGTGTAGTGGACACCGAAGAGTaGCACAAGCACCAACGTGGACCTGAGCAGCTTCCGGTACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVRQGHEDGVVDTEE*HKHQRGPEQLPVLL Trigger: CAGCAGTACCGGAAGCTGCTCAGGTCCACGTTGGTGCTTGTGCCACTCTTCGGTGTCCACTACACCGTCTTCATGGCCTTGCCGTACACC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CCA 90 bp | CTTGGGAACTGTCATAGTAACTGGTATGGTTTCGTTCTCAATGGCTaGAGCGCCCGGCTTGGCGTGGCCAGGCAGCTGGGAGTGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LGNCHSNWYGFVLNG*SARLGVARQLGVAI Trigger: AATGGCCACTCCCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGCCATTGAGAACGAAACCATACCAGTTACTATGACAGTTCCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTTGGCCCACGTCCGGTaGTGCCCTGGAACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMLAHVR*CPGTTS Trigger: GGAGGTGGTTCCAGGGCACAACCGGACGTGGGCCAA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS GCA 90 bp | GCTGGCGTCCACCCTTTGTCTGACTCCATTATGTTGGCTGCTGTGTaGAGAACTTCCTTGAGCAGCTTGTCACATTGCGCCTGGGCACGG | + |
|
Preference number: 5 (lower is better) Translates to: AGVHPLSDSIMLAAV*RTSLSSLSHCAWAR Trigger: CCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGTCAGACAAAGGGTGGACGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGAGCTGGGAGTGGCCATaGGTGGTGGCAGGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMSWEWP*VVAGSR Trigger: CCTGCTTCCTGCCACCACCAATGGCCACTCCCAGCT...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CCA 90 bp | GGAGCCATTAAGGAAGCCGTCGTCCTTGGGAACTGTCATAGTAACTaGTATGGTTTCGTTCTCAATGGCTGGAGCGCCCGGCTTGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GAIKEAVVLGNCHSN*YGFVLNGWSARLGV Trigger: CACGCCAAGCCGGGCGCTCCAGCCATTGAGAACGAAACCATACCAGTTACTATGACAGTTCCCAAGGACGACGGCTTCCTTAATGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTTGGCCCACGTCCGGTaGTGCCCTGGAACCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWLAHVR*CPGTTS Trigger: GGAGGTGGTTCCAGGGCACAACCGGACGTGGGCCAA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTCACACCGGCCCGCATaGGTCTCCCGAAGCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLSHRPA*VSRSLV Trigger: CACTAAGCTTCGGGAGACCAATGCGGGCCGGTGTGA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTCACACCGGCCCGCATaGGTCTCCCGAAGCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMSHRPA*VSRSLV Trigger: CACTAAGCTTCGGGAGACCAATGCGGGCCGGTGTGA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS TCA 90 bp | GTTGAAGAGCATCTCATAGTGCATCTGGATCTGCCACAGTGTCCCTaGGACCTCGGTGTACGGCAAGGCCATGAAGACGGTGTAGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VEEHLIVHLDLPQCP*DLGVRQGHEDGVVD Trigger: GTCCACTACACCGTCTTCATGGCCTTGCCGTACACCGAGGTCTCAGGGACACTGTGGCAGATCCAGATGCACTATGAGATGCTCTTCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS GCA 90 bp | GCTGTAGCTGCTACTCCCACTTCGTGCTTTACGCTTGAAGTCCAATaGCAGTGTCCAGCGGCTCCAAGACTTCCTAATCTCTGCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVAATPTSCFTLEVQ*QCPAAPRLPNLCLH Trigger: GTGCAGGCAGAGATTAGGAAGTCTTGGAGCCGCTGGACACTGGCATTGGACTTCAAGCGTAAAGCACGAAGTGGGAGTAGCAGCTACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGGCCAGCAAACGATGTaGTCCCACTCTGGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLGQQTM*SHSGRQ Trigger: CTGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTCCCAGCACCCAGTGTaGGCCAAGGTTGCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLSQHPV*AKVALT Trigger: TGTCAGAGCAACCTTGGCCAACACTGGGTGCTGGGA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGAGCTGGGAGTGGCCATaGGTGGTGGCAGGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSWEWP*VVAGSR Trigger: CCTGCTTCCTGCCACCACCAATGGCCACTCCCAGCT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS GCA 90 bp | GTCATAAATGTAATCGGGACAAGGTACTGCCACCACTTCACCTGGTaGCCCCAATGGCCAGCAAACGATGTTGTCCCACTCTGGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: VINVIGTRYCHHFTW*PQWPANDVVPLWQT Trigger: TGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCCATTGGGGGCACCAGGTGAAGTGGTGGCAGTACCTTGTCCCGATTACATTTATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS CCA 90 bp | GAAGTCATAAATGTAATCGGGACAAGGTACTGCCACCACTTCACCTaGTGCCCCCAATGGCCAGCAAACGATGTTGTCCCACTCTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVINVIGTRYCHHFT*CPQWPANDVVPLWQ Trigger: CTGCCAGAGTGGGACAACATCGTTTGCTGGCCATTGGGGGCACCAGGTGAAGTGGTGGCAGTACCTTGTCCCGATTACATTTATGACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS CCA 90 bp | ATCTGTTCCTCTTTGGTAAAGACATCGTCTGCGTCCACAGAAGCATaGTGTAGGGGAACTCCAACCACAGGTTTCCAGACCCAGGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: ICSSLVKTSSASTEA*CRGTPTTGFQTQDP Trigger: GGGGTCCTGGGTCTGGAAACCTGTGGTTGGAGTTCCCCTACACCATGCTTCTGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199791.2 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTGGATGATCCACTTCTaGTGCCCAGAGCTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLWMIHF*CPELRS Trigger: GGACCTGAGCTCTGGGCACAAGAAGTGGATCATCCA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTCGTGTGTGACACCATaGGGCCATAGCTGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMSCVTP*GHSCSC Trigger: GCAGCTACAGCTATGGCCCAATGGTGTCACACACGA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTCGTGTGTGACACCATaGGGCCATAGCTGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLSCVTP*GHSCSC Trigger: GCAGCTACAGCTATGGCCCAATGGTGTCACACACGA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS TCA 90 bp | CTTTGTCTGACTCCATTATGTTGGCTGCTGTGTGCAGAACTTCCTTaGGCAGCTTGTCACATTGCGCCTGGGCACGGTGCAGCAGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LCLTPLCWLLCAELP*AACHIAPGHGAAGK Trigger: TTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGTCAGACAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS GCA 90 bp | TGCAGAACTTCCTTGAGCAGCTTGTCACATTGCGCCTGGGCACGGTaGAGCAGGAAAATCTGTTCCTCTTTGGTAAAGACATCGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: CRTSLSSLSHCAWAR*SRKICSSLVKTSSA Trigger: CGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS GCA 90 bp | ATGTTGGCTGCTGTGTGCAGAACTTCCTTGAGCAGCTTGTCACATTaGGCCTGGGCACGGTGCAGCAGGAAAATCTGTTCCTCTTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: MLAAVCRTSLSSLSH*AWARCSRKICSSLV Trigger: TACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS GCA 90 bp | ACGGTGCAGCAGGAAAATCTGTTCCTCTTTGGTAAAGACATCGTCTaGGTCCACCAATTGTGTGTCCTGCCCACTAGGACTCTCCCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TVQQENLFLFGKDIV*VHQLCVLPTRTLPV Trigger: TACCGGGAGAGTCCTAGTGGGCAGGACACACAATTGGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199862.5 |
||
| CDS CCA 90 bp | GCTGCTGTGTGCAGAACTTCCTTGAGCAGCTTGTCACATTGCGCCTaGGCACGGTGCAGCAGGAAAATCTGTTCCTCTTTGGTAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: AAVCRTSLSSLSHCA*ARCSRKICSSLVKT Trigger: TGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGGCTGGCGTCCACCCTTaGTCTGACTCCATTATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMAGVHP*SDSIML Trigger: CAACATAATGGAGTCAGACAAAGGGTGGACGCCAGC...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGGCCAGCAAACGATGTaGTCCCACTCTGGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWGQQTM*SHSGRQ Trigger: CTGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTCCCAGCACCCAGTGTaGGCCAAGGTTGCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSQHPV*AKVALT Trigger: TGTCAGAGCAACCTTGGCCAACACTGGGTGCTGGGA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAAGCTGGGAGTGGCCATaGGTGGTGGCAGGAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKSWEWP*VVAGSR Trigger: CCTGCTTCCTGCCACCACCAATGGCCACTCCCAGCT...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGTGTGCAGAACTTCCTaGAGCAGCTTGTCACATTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLVCRTS*SSLSHC Trigger: GCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACAC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTGGATGATCCACTTCTaGTGCCCAGAGCTCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWWMIHF*CPELRS Trigger: GGACCTGAGCTCTGGGCACAAGAAGTGGATCATCCA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAATCACACCGGCCCGCATaGGTCTCCCGAAGCTTAGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKSHRPA*VSRSLV Trigger: CACTAAGCTTCGGGAGACCAATGCGGGCCGGTGTGA...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTCGTGTGTGACACCATaGGGCCATAGCTGTAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSCVTP*GHSCSC Trigger: GCAGCTACAGCTATGGCCCAATGGTGTCACACACGA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGTCTGACTCCATTATGTaGGCTGCTGTGTGCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMSDSIM*AAVCRT Trigger: AGTTCTGCACACAGCAGCCAACATAATGGAGTCAGA...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGTCTGACTCCATTATGTaGGCTGCTGTGTGCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLSDSIM*AAVCRT Trigger: AGTTCTGCACACAGCAGCCAACATAATGGAGTCAGA...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGCTGGCGTCCACCCTTaGTCTGACTCCATTATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWAGVHP*SDSIML Trigger: CAACATAATGGAGTCAGACAAAGGGTGGACGCCAGC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CAA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGGCCAGCAAACGATGTaGTCCCACTCTGGCAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKGQQTM*SHSGRQ Trigger: CTGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAATCCCAGCACCCAGTGTaGGCCAAGGTTGCTCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKSQHPV*AKVALT Trigger: TGTCAGAGCAACCTTGGCCAACACTGGGTGCTGGGA...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGGCCTGCACCTCACCATaGCAGAAACAGTATATGATG | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLACTSP*QKQYMM Trigger: CATCATATACTGTTTCTGCAATGGTGAGGTGCAGGC...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGTGTGCAGAACTTCCTaGAGCAGCTTGTCACATTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWVCRTS*SSLSHC Trigger: GCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACAC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | AATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGCCCATGAAAATCTGTTCCTCTTaGGTAAAGACATCGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NRQPAKLWLLGPSVHLPMKICSS*VKTSSA Trigger: CGCAGACGATGTCTTTACCAAAGAGGAACAGATTTT...CATGGGCAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAATAGACAGCCAGCCAAACTCTGGCTTCTTGGTCCATCTGTCCATCTGAAAATCTGTTCCTCTTaGGTAAAGACATCGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLNRQPAKLWLLGPSVHLKICSS*VKTSSA Trigger: CGCAGACGATGTCTTTACCAAAGAGGAACAGATTTT...CAGATGGACAGATGGACCAAGAAGCCAGAGTTTGGCTGGCTGTCTATTCAGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGTCTGACTCCATTATGTaGGCTGCTGTGTGCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWSDSIM*AAVCRT Trigger: AGTTCTGCACACAGCAGCCAACATAATGGAGTCAGA...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGGCCTGCACCTCACCATaGCAGAAACAGTATATGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWACTSP*QKQYMM Trigger: CATCATATACTGTTTCTGCAATGGTGAGGTGCAGGC...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAACTCTGGAAAATCTGTTCCTCTTaGGTAAAGACATCGTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: FSFCLPGPVLNRQPAKLWKICSS*VKTSSA Trigger: CGCAGACGATGTCTTTACCAAAGAGGAACAGATTTT...CCAGAGTTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCTTTTCCTTTTGTCTTCCTGGTCCAGTCCTGAATAGACAGCCAGCCAAAGCCTGCACCTCACCATaGCAGAAACAGTATATGATG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSFCLPGPVLNRQPAKACTSP*QKQYMM Trigger: CATCATATACTGTTTCTGCAATGGTGAGGTGCAGGC...TTTGGCTGGCTGTCTATTCAGGACTGGACCAGGAAGACAAAAGGAAAAGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CAA 72 bp | CCCGGCTTGGCGTGGCCAGGCAGCTGGGAGTGGCCATaGGTGGTGGCAGGAAGCAGGCGGGGGCTAAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLAWPGSWEWP*VVAGSRRGLRG Trigger: TCCCCTTAGCCCCCGCCTGCTTCCTGCCACCACCAATGGCCACTCCCAGCTGCCTGGCCACGCCAAGCCGGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CAA 90 bp | GCTGGAGCGCCCGGCTTGGCGTGGCCAGGCAGCTGGGAGTGGCCATaGGTGGTGGCAGGAAGCAGGCGGGGGCTAAGGGGAAGGCTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: AGAPGLAWPGSWEWP*VVAGSRRGLRGRLS Trigger: ACTCAGCCTTCCCCTTAGCCCCCGCCTGCTTCCTGCCACCACCAATGGCCACTCCCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS GCA 72 bp | GCAGCGGCGGGCGGAGGCGGCACCTGCGCGATGATATaGAACTCTTCCTCCGTGAGGCGCTCGGCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: AAAGGGGTCAMI*NSSSVRRSASS Trigger: GGATGAGGCCGAGCGCCTCACGGAGGAAGAGTTGCATATCATCGCGCAGGTGCCGCCTCCGCCCGCCGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
||
| CDS CCA 72 bp | GCACTCGCTGTAGTTGGCCCACGTCCGGTTGTGCCCTaGAACCACCTCCCAGCTGCCATTGCGGTCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ALAVVGPRPVVP*NHLPAAIAVAA Trigger: CGCTGCGACCGCAATGGCAGCTGGGAGGTGGTTCCAGGGCACAACCGGACGTGGGCCAACTACAGCGAGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS CAA 90 bp | ACTGCCACCACTTCACCTGGTGCCCCCAATGGCCAGCAAACGATGTaGTCCCACTCTGGCAGACAGGGACGCCCTCGGCGCCTGCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TATTSPGAPNGQQTM*SHSGRQGRPRRLLP Trigger: CGGCAGCAGGCGCCGAGGGCGTCCCTGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCCATTGGGGGCACCAGGTGAAGTGGTGGCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS GCA 72 bp | CCCACGTCCGGTTGTGCCCTGGAACCACCTCCCAGCTaGCATTGCGGTCGCAGCGTCTGTAGGCATGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PTSGCALEPPPS*HCGRSVCRHGL Trigger: AAGGCCATGCCTACAGACGCTGCGACCGCAATGGCAGCTGGGAGGTGGTTCCAGGGCACAACCGGACGTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
||
| CDS CCA 72 bp | GTTTCGTTCTCAATGGCTGGAGCGCCCGGCTTGGCGTaGCCAGGCAGCTGGGAGTGGCCATTGGTGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VSFSMAGAPGLA*PGSWEWPLVVA Trigger: TGCCACCACCAATGGCCACTCCCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGCCATTGAGAACGAAAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CCA 72 bp | GTATGGTTTCGTTCTCAATGGCTGGAGCGCCCGGCTTaGCGTGGCCAGGCAGCTGGGAGTGGCCATTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VWFRSQWLERPA*RGQAAGSGHWW Trigger: CCACCAATGGCCACTCCCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGCCATTGAGAACGAAACCATAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 72 bp | ACTTCACCTGGTGCCCCCAATGGCCAGCAAACGATGTaGTCCCACTCTGGCAGACAGGGACGCCCTCGGCGC | + |
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Preference number: 6 (lower is better) Translates to: TSPGAPNGQQTM*SHSGRQGRPRR Trigger: GCGCCGAGGGCGTCCCTGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCCATTGGGGGCACCAGGTGAAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 72 bp | GGTATGGTTTCGTTCTCAATGGCTGGAGCGCCCGGCTaGGCGTGGCCAGGCAGCTGGGAGTGGCCATTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GMVSFSMAGAPG*AWPGSWEWPLV Trigger: CACCAATGGCCACTCCCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGCCATTGAGAACGAAACCATACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS GCA 72 bp | TCCGGTTGTGCCCTGGAACCACCTCCCAGCTGCCATTaGGGTCGCAGCGTCTGTAGGCATGGCCTTTGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGCALEPPPSCH*GRSVCRHGLCG Trigger: ACCACAAAGGCCATGCCTACAGACGCTGCGACCGCAATGGCAGCTGGGAGGTGGTTCCAGGGCACAACCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 72 bp | TTCCGGTACTGCTGCCTGGTGTCACACCGGCCCGCATaGGTCTCCCGAAGCTTAGTGGCAAGCACCCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: FRYCCLVSHRPA*VSRSLVASTRM Trigger: CATCCGGGTGCTTGCCACTAAGCTTCGGGAGACCAATGCGGGCCGGTGTGACACCAGGCAGCAGTACCGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS TCA 72 bp | GGACACCGAAGAGTGGCACAAGCACCAACGTGGACCTaGGCAGCTTCCGGTACTGCTGCCTGGTGTCACACC | + |
|
Preference number: 6 (lower is better) Translates to: GHRRVAQAPTWT*AASGTAAWCHT Trigger: GGTGTGACACCAGGCAGCAGTACCGGAAGCTGCTCAGGTCCACGTTGGTGCTTGTGCCACTCTTCGGTGTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS GCA 72 bp | GATGCCAGGATGGGCACCTGGATGATCCACTTCTTGTaGCCAGAGCTCAGGTCCCAGCACCCAGTGTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DARMGTWMIHFL*PELRSQHPVLA Trigger: GGCCAACACTGGGTGCTGGGACCTGAGCTCTGGGCACAAGAAGTGGATCATCCAGGTGCCCATCCTGGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 90 bp | ATAGTAACTGGTATGGTTTCGTTCTCAATGGCTGGAGCGCCCGGCTaGGCGTGGCCAGGCAGCTGGGAGTGGCCATTGGTGGTGGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: IVTGMVSFSMAGAPG*AWPGSWEWPLVVAG Trigger: TCCTGCCACCACCAATGGCCACTCCCAGCTGCCTGGCCACGCCAAGCCGGGCGCTCCAGCCATTGAGAACGAAACCATACCAGTTACTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 90 bp | CTGAGCAGCTTCCGGTACTGCTGCCTGGTGTCACACCGGCCCGCATaGGTCTCCCGAAGCTTAGTGGCAAGCACCCGGATGATGTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: LSSFRYCCLVSHRPA*VSRSLVASTRMMLI Trigger: TATCAACATCATCCGGGTGCTTGCCACTAAGCTTCGGGAGACCAATGCGGGCCGGTGTGACACCAGGCAGCAGTACCGGAAGCTGCTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 90 bp | GTCCTGCACGGGGGCCCACATTGGTCACACTCGTGTGTGACACCATaGGGCCATAGCTGTAGCTGCTACTCCCACTTCGTGCTTTACGCT | + |
|
Preference number: 6 (lower is better) Translates to: VLHGGPHWSHSCVTP*GHSCSCYSHFVLYA Trigger: AGCGTAAAGCACGAAGTGGGAGTAGCAGCTACAGCTATGGCCCAATGGTGTCACACACGAGTGTGACCAATGTGGGCCCCCGTGCAGGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CCA 72 bp | CAAGGCCATGAAGACGGTGTAGTGGACACCGAAGAGTaGCACAAGCACCAACGTGGACCTGAGCAGCTTCCG | + |
|
Preference number: 6 (lower is better) Translates to: QGHEDGVVDTEE*HKHQRGPEQLP Trigger: CGGAAGCTGCTCAGGTCCACGTTGGTGCTTGTGCCACTCTTCGGTGTCCACTACACCGTCTTCATGGCCTTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 72 bp | GGGGGCCCACATTGGTCACACTCGTGTGTGACACCATaGGGCCATAGCTGTAGCTGCTACTCCCACTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GGPHWSHSCVTP*GHSCSCYSHFV Trigger: CACGAAGTGGGAGTAGCAGCTACAGCTATGGCCCAATGGTGTCACACACGAGTGTGACCAATGTGGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS TCA 72 bp | ACAGTGTCCCTGAGACCTCGGTGTACGGCAAGGCCATaGAGACGGTGTAGTGGACACCGAAGAGTGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: TVSLRPRCTARP*RRCSGHRRVAQ Trigger: TTGTGCCACTCTTCGGTGTCCACTACACCGTCTTCATGGCCTTGCCGTACACCGAGGTCTCAGGGACACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CCA 72 bp | ACAAGGTACTGCCACCACTTCACCTGGTGCCCCCAATaGCCAGCAAACGATGTTGTCCCACTCTGGCAGACA | + |
|
Preference number: 6 (lower is better) Translates to: TRYCHHFTWCPQ*PANDVVPLWQT Trigger: TGTCTGCCAGAGTGGGACAACATCGTTTGCTGGCCATTGGGGGCACCAGGTGAAGTGGTGGCAGTACCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 90 bp | TCACATTGCGCCTGGGCACGGTGCAGCAGGAAAATCTGTTCCTCTTaGGTAAAGACATCGTCTGCGTCCACCAGCGCATATGCGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SHCAWARCSRKICSS*VKTSSASTSAYAEL Trigger: CAGCTCCGCATATGCGCTGGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 |
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| CDS TCA 72 bp | CATCTCATAGTGCATCTGGATCTGCCACAGTGTCCCTaGGACCTCGGTGTACGGCAAGGCCATGAAGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLIVHLDLPQCP*DLGVRQGHEDG Trigger: ACCGTCTTCATGGCCTTGCCGTACACCGAGGTCTCAGGGACACTGTGGCAGATCCAGATGCACTATGAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS GCA 72 bp | GCTGTGTGCAGAACTTCCTTGAGCAGCTTGTCACATTaGGCCTGGGCACGGTGCAGCAGGAAAATCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: AVCRTSLSSLSH*AWARCSRKICS Trigger: GGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 72 bp | CTGGGCTTCCCTGACGTAGATGCTGGCGTCCACCCTTaGTCTGACTCCATTATGTTGGCTGCTGTGTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LGFPDVDAGVHP*SDSIMLAAVCR Trigger: TCTGCACACAGCAGCCAACATAATGGAGTCAGACAAAGGGTGGACGCCAGCATCTACGTCAGGGAAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS TCA 72 bp | ACTCCATTATGTTGGCTGCTGTGTGCAGAACTTCCTTaGGCAGCTTGTCACATTGCGCCTGGGCACGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TPLCWLLCAELP*AACHIAPGHGA Trigger: TGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS TCA 72 bp | AGCTGTAGCTGCTACTCCCACTTCGTGCTTTACGCTTaGAGTCCAATGCCAGTGTCCAGCGGCTCCAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: SCSCYSHFVLYA*SPMPVSSGSKT Trigger: AGTCTTGGAGCCGCTGGACACTGGCATTGGACTTCAAGCGTAAAGCACGAAGTGGGAGTAGCAGCTACAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS GCA 72 bp | CATTGGGCCATAGCTGTAGCTGCTACTCCCACTTCGTaGTTTACGCTTGAAGTCCAATGCCAGTGTCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: HWAIAVAATPTS*FTLEVQCQCPA Trigger: CGCTGGACACTGGCATTGGACTTCAAGCGTAAAGCACGAAGTGGGAGTAGCAGCTACAGCTATGGCCCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 72 bp | GCCTGGGCACGGTGCAGCAGGAAAATCTGTTCCTCTTaGGTAAAGACATCGTCTGCGTCCACCAGCGCATAT | + |
|
Preference number: 6 (lower is better) Translates to: AWARCSRKICSS*VKTSSASTSAY Trigger: ATATGCGCTGGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 |
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| CDS CAA 72 bp | TGCTGTGTGCAGAACTTCCTTGAGCAGCTTGTCACATaGCGCCTGGGCACGGTGCAGCAGGAAAATCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CCVQNFLEQLVT*RLGTVQQENLF Trigger: GAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 90 bp | GACTCCATTATGTTGGCTGCTGTGTGCAGAACTTCCTTGAGCAGCTaGTCACATTGCGCCTGGGCACGGTGCAGCAGGAAAATCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: DSIMLAAVCRTSLSS*SHCAWARCSRKICS Trigger: GGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 90 bp | TCACATTGCGCCTGGGCACGGTGCAGCAGGAAAATCTGTTCCTCTTaGGTAAAGACATCGTCTGCGTCCACCAATTGTGTGTCCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SHCAWARCSRKICSS*VKTSSASTNCVSCP Trigger: TGGGCAGGACACACAATTGGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199862.5 |
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| CDS GCA 72 bp | GTGGTTGAAGTCATAAATGTAATCGGGACAAGGTACTaGCACCACTTCACCTGGTGCCCCCAATGGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VVEVINVIGTRY*HHFTWCPQWPA Trigger: TGCTGGCCATTGGGGGCACCAGGTGAAGTGGTGGCAGTACCTTGTCCCGATTACATTTATGACTTCAACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS GCA 72 bp | GCTACTCCCACTTCGTGCTTTACGCTTGAAGTCCAATaGCAGTGTCCAGCGGCTCCAAGACTTCCTAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: ATPTSCFTLEVQ*QCPAAPRLPNL Trigger: GAGATTAGGAAGTCTTGGAGCCGCTGGACACTGGCATTGGACTTCAAGCGTAAAGCACGAAGTGGGAGTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 72 bp | GATGCTGGCGTCCACCCTTTGTCTGACTCCATTATGTaGGCTGCTGTGTGCAGAACTTCCTTGAGCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DAGVHPLSDSIM*AAVCRTSLSSL Trigger: CAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGTCAGACAAAGGGTGGACGCCAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 72 bp | GCCTGGGCACGGTGCAGCAGGAAAATCTGTTCCTCTTaGGTAAAGACATCGTCTGCGTCCACCAATTGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: AWARCSRKICSS*VKTSSASTNCV Trigger: CACACAATTGGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199862.5 |
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| CDS CAA 90 bp | TATGTTGGCTGCTGTGTGCAGAACTTCCTTGAGCAGCTTGTCACATaGCGCCTGGGCACGGTGCAGCAGGAAAATCTGTTCCTCTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: YVGCCVQNFLEQLVT*RLGTVQQENLFLFG Trigger: ACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 90 bp | CCTGACGTAGATGCTGGCGTCCACCCTTTGTCTGACTCCATTATGTaGGCTGCTGTGTGCAGAACTTCCTTGAGCAGCTTGTCACATTGC | + |
|
Preference number: 6 (lower is better) Translates to: PDVDAGVHPLSDSIM*AAVCRTSLSSLSHC Trigger: GCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGTCAGACAAAGGGTGGACGCCAGCATCTACGTCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 90 bp | TTCTCTTTCCTGGGCTTCCCTGACGTAGATGCTGGCGTCCACCCTTaGTCTGACTCCATTATGTTGGCTGCTGTGTGCAGAACTTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: FSFLGFPDVDAGVHP*SDSIMLAAVCRTSL Trigger: CAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGTCAGACAAAGGGTGGACGCCAGCATCTACGTCAGGGAAGCCCAGGAAAGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CAA 90 bp | TCCTCATCCAGACCCGAGCAGGAGCCATTAAGGAAGCCGTCGTCCTaGGGAACTGTCATAGTAACTGGTATGGTTTCGTTCTCAATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSRPEQEPLRKPSS*GTVIVTGMVSFSMA Trigger: AGCCATTGAGAACGAAACCATACCAGTTACTATGACAGTTCCCAAGGACGACGGCTTCCTTAATGGCTCCTGCTCGGGTCTGGATGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS CAA 90 bp | GAAAATCTGTTCCTCTTTGGTAAAGACATCGTCTGCGTCCACCAATaGTGTGTCCTGCCCACTAGGACTCTCCCGGTATCCTGGTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: ENLFLFGKDIVCVHQ*CVLPTRTLPVSWSQ Trigger: CTGAGACCAGGATACCGGGAGAGTCCTAGTGGGCAGGACACACAATTGGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199862.5 |
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| CDS GCA 72 bp | TCCTTGAGCAGCTTGTCACATTGCGCCTGGGCACGGTaGAGCAGGAAAATCTGTTCCTCTTTGGTAAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: SLSSLSHCAWAR*SRKICSSLVKT Trigger: TGTCTTTACCAAAGAGGAACAGATTTTCCTGCTGCACCGTGCCCAGGCGCAATGTGACAAGCTGCTCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS GCA 72 bp | CACCCTTTGTCTGACTCCATTATGTTGGCTGCTGTGTaGAGAACTTCCTTGAGCAGCTTGTCACATTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: HPLSDSIMLAAV*RTSLSSLSHCA Trigger: GGCGCAATGTGACAAGCTGCTCAAGGAAGTTCTGCACACAGCAGCCAACATAATGGAGTCAGACAAAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000196057.2 ENSMUST00000198865.5 ENSMUST00000199862.5 |
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| CDS CCA 72 bp | TCTTTGGTAAAGACATCGTCTGCGTCCACAGAAGCATaGTGTAGGGGAACTCCAACCACAGGTTTCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: SLVKTSSASTEA*CRGTPTTGFQT Trigger: GGTCTGGAAACCTGTGGTTGGAGTTCCCCTACACCATGCTTCTGTGGACGCAGACGATGTCTTTACCAAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199791.2 |
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| CDS CAA 72 bp | AGACCCGAGCAGGAGCCATTAAGGAAGCCGTCGTCCTaGGGAACTGTCATAGTAACTGGTATGGTTTCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RPEQEPLRKPSS*GTVIVTGMVSF Trigger: GAACGAAACCATACCAGTTACTATGACAGTTCCCAAGGACGACGGCTTCCTTAATGGCTCCTGCTCGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006005.12 ENSMUST00000166716.8 ENSMUST00000198865.5 |
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| CDS GCA 72 bp | CAGGAAAATCTGTTCCTCTTTGGTAAAGACATCGTCTaGGTCCACCAATTGTGTGTCCTGCCCACTAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: QENLFLFGKDIV*VHQLCVLPTRT Trigger: AGTCCTAGTGGGCAGGACACACAATTGGTGGACGCAGACGATGTCTTTACCAAAGAGGAACAGATTTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199862.5 |
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