Pregenerated sensors for PTH (Mus musculus)

Ensembl gene IDs: ENSMUSG00000059077

Ensembl transcript IDs: ENSMUST00000079793.7

Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	AGCCATTGCATCCTCTCCATGGAGGCCAGGTGTTTGCCCAGGTTGTaGATAAGCTGTATTTCACTGACAGCTCTCTTCCTCACGGGTTTC	+
Preference number: 5 (lower is better) Translates to: SHCILSMEARCLPRL*ISCISLTALFLTGF Trigger: GAAACCCGTGAGGAAGAGAGCTGTCAGTGAAATACAGCTTATGCACAACCTGGGCAAACACCTGGCCTCCATGGAGAGGATGCAATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS GCA 90 bp	TCTCTTCCTCACGGGTTTCCCATCCGTTTGGGTAAGAAGACAGACTaGCAGCATGATGATCATCACTTTAGCCACGGTGTTTGCAGACAT	+
Preference number: 5 (lower is better) Translates to: SLPHGFPIRLGKKTD*QHDDHHFSHGVCRH Trigger: ATGTCTGCAAACACCGTGGCTAAAGTGATGATCATCATGCTGGCAGTCTGTCTTCTTACCCAAACGGATGGGAAACCCGTGAGGAAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CCA 90 bp	CAAGACTTTTTGGATTGCCATCAACAAGGACATTTTCCTCCTTCTTaGTGGGCTTCTGGTGACTGCCATCTCTGGCAGCCATTTGGACTC	+
Preference number: 5 (lower is better) Translates to: QDFLDCHQQGHFPPS*WASGDCHLWQPFGL Trigger: GAGTCCAAATGGCTGCCAGAGATGGCAGTCACCAGAAGCCCACCAAGAAGGAGGAAAATGTCCTTGTTGATGGCAATCCAAAAAGTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS GCA 90 bp	AGACTAACAAAATTGTGCATATCTTGCAGCTTCCTTCTCAGCCATTaGATCCTCTCCATGGAGGCCAGGTGTTTGCCCAGGTTGTGCATA	+
Preference number: 5 (lower is better) Translates to: RLTKLCISCSFLLSH*ILSMEARCLPRLCI Trigger: TATGCACAACCTGGGCAAACACCTGGCCTCCATGGAGAGGATGCAATGGCTGAGAAGGAAGCTGCAAGATATGCACAATTTTGTTAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CCA 90 bp	TGTATTTCACTGACAGCTCTCTTCCTCACGGGTTTCCCATCCGTTTaGGTAAGAAGACAGACTGCCAGCATGATGATCATCACTTTAGCC	+
Preference number: 5 (lower is better) Translates to: CISLTALFLTGFPSV*VRRQTASMMIITLA Trigger: GGCTAAAGTGATGATCATCATGCTGGCAGTCTGTCTTCTTACCCAAACGGATGGGAAACCCGTGAGGAAGAGAGCTGTCAGTGAAATACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS GCA 72 bp	ATCCTCTCCATGGAGGCCAGGTGTTTGCCCAGGTTGTaGATAAGCTGTATTTCACTGACAGCTCTCTTCCTC	+
Preference number: 6 (lower is better) Translates to: ILSMEARCLPRL*ISCISLTALFL Trigger: GAGGAAGAGAGCTGTCAGTGAAATACAGCTTATGCACAACCTGGGCAAACACCTGGCCTCCATGGAGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CCA 72 bp	CTGACAGCTCTCTTCCTCACGGGTTTCCCATCCGTTTaGGTAAGAAGACAGACTGCCAGCATGATGATCATC	+
Preference number: 6 (lower is better) Translates to: LTALFLTGFPSV*VRRQTASMMII Trigger: GATGATCATCATGCTGGCAGTCTGTCTTCTTACCCAAACGGATGGGAAACCCGTGAGGAAGAGAGCTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CCA 72 bp	TTGGATTGCCATCAACAAGGACATTTTCCTCCTTCTTaGTGGGCTTCTGGTGACTGCCATCTCTGGCAGCCA	+
Preference number: 6 (lower is better) Translates to: LDCHQQGHFPPS*WASGDCHLWQP Trigger: TGGCTGCCAGAGATGGCAGTCACCAGAAGCCCACCAAGAAGGAGGAAAATGTCCTTGTTGATGGCAATCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CCA 72 bp	GATTGCCATCAACAAGGACATTTTCCTCCTTCTTGGTaGGCTTCTGGTGACTGCCATCTCTGGCAGCCATTT	+
Preference number: 6 (lower is better) Translates to: DCHQQGHFPPSW*ASGDCHLWQPF Trigger: AAATGGCTGCCAGAGATGGCAGTCACCAGAAGCCCACCAAGAAGGAGGAAAATGTCCTTGTTGATGGCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CAA 72 bp	ACTGACAGCTCTCTTCCTCACGGGTTTCCCATCCGTTaGGGTAAGAAGACAGACTGCCAGCATGATGATCAT	+
Preference number: 6 (lower is better) Translates to: TDSSLPHGFPIR*GKKTDCQHDDH Trigger: ATGATCATCATGCTGGCAGTCTGTCTTCTTACCCAAACGGATGGGAAACCCGTGAGGAAGAGAGCTGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CAA 90 bp	CTCCTTCTTGGTGGGCTTCTGGTGACTGCCATCTCTGGCAGCCATTaGGACTCCAAGACTAACAAAATTGTGCATATCTTGCAGCTTCCT	+
Preference number: 6 (lower is better) Translates to: LLLGGLLVTAISGSH*DSKTNKIVHILQLP Trigger: AGGAAGCTGCAAGATATGCACAATTTTGTTAGTCTTGGAGTCCAAATGGCTGCCAGAGATGGCAGTCACCAGAAGCCCACCAAGAAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS GCA 72 bp	CTGGCAGCCATTTGGACTCCAAGACTAACAAAATTGTaGATATCTTGCAGCTTCCTTCTCAGCCATTGCATC	+
Preference number: 6 (lower is better) Translates to: LAAIWTPRLTKL*ISCSFLLSHCI Trigger: GATGCAATGGCTGAGAAGGAAGCTGCAAGATATGCACAATTTTGTTAGTCTTGGAGTCCAAATGGCTGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS GCA 72 bp	CATCAGCTTTGTCTCCCTCACCAAGACTTTTTGGATTaGCATCAACAAGGACATTTTCCTCCTTCTTGGTGG	+
Preference number: 6 (lower is better) Translates to: HQLCLPHQDFLD*HQQGHFPPSWW Trigger: CCACCAAGAAGGAGGAAAATGTCCTTGTTGATGGCAATCCAAAAAGTCTTGGTGAGGGAGACAAAGCTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CAA 72 bp	TCTCTGGCAGCCATTTGGACTCCAAGACTAACAAAATaGTGCATATCTTGCAGCTTCCTTCTCAGCCATTGC	+
Preference number: 6 (lower is better) Translates to: SLAAIWTPRLTK*CISCSFLLSHC Trigger: GCAATGGCTGAGAAGGAAGCTGCAAGATATGCACAATTTTGTTAGTCTTGGAGTCCAAATGGCTGCCAGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CAA 72 bp	ACATCAGCTTTGTCTCCCTCACCAAGACTTTTTGGATaGCCATCAACAAGGACATTTTCCTCCTTCTTGGTG	+
Preference number: 6 (lower is better) Translates to: TSALSPSPRLFG*PSTRTFSSFLV Trigger: CACCAAGAAGGAGGAAAATGTCCTTGTTGATGGCAATCCAAAAAGTCTTGGTGAGGGAGACAAAGCTGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079793.7
CDS CAA 72 bp	CATTTGGACTCCAAGACTAACAAAATTGTGCATATCTaGCAGCTTCCTTCTCAGCCATTGCATCCTCTCCAT	+
Preference number: 6 (lower is better) Translates to: HLDSKTNKIVHI*QLPSQPLHPLH Trigger: ATGGAGAGGATGCAATGGCTGAGAAGGAAGCTGCAAGATATGCACAATTTTGTTAGTCTTGGAGTCCAAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079793.7