Pregenerated sensors for PTGS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032487Ensembl transcript IDs: ENSMUST00000035065.9, ENSMUST00000190784.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACATaGGGCCTTCTGCAGTCCAGGTTCAATGGGCTGGAAGACATATCA | + |
|
Preference number: 1 (lower is better) Translates to: RGAAMLASRLSSHMT*GLLQSRFNGLEDIS Trigger: TGATATGTCTTCCAGCCCATTGAACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR CCA 90 bp | GCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTCAATaGGCTGGAAGACATATCAATATTGTGAAGAAGCTCACGAGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: AELTHDMGPSAVQVQ*AGRHINIVKKLTRP Trigger: TGGCCTCGTGAGCTTCTTCACAATATTGATATGTCTTCCAGCCCATTGAACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR TCA 90 bp | CGAAGTTCAGCCTGGCAAGTCTTTAACCTCACAGCAAAAACCTACTaGGTACCAGGCCAGCACAAAACCAGGATCAGGATGTCTCCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: RSSAWQVFNLTAKTY*VPGQHKTRIRMSPL Trigger: CAAAGGAGACATCCTGATCCTGGTTTTGTGCTGGCCTGGTACTCAGTAGGTTTTTGCTGTGAGGTTAAAGACTTGCCAGGCTGAACTTCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR GCA 90 bp | ACTTACAGGGCCTTCAAAATGTCTAAAATGTCAGTCTTTATAACATaGTTGGGTCAGTCAATATTGGATCTATGCAGTCTGCTTTATGCG | + |
|
Preference number: 1 (lower is better) Translates to: TYRAFKMSKMSVFIT*LGQSILDLCSLLYA Trigger: CGCATAAAGCAGACTGCATAGATCCAATATTGACTGACCCAAGCATGTTATAAAGACTGACATTTTAGACATTTTGAAGGCCCTGTAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTTGTAGAAGCTTTTGTTaGTCTAGGCTTTGCTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: AGIQAELTHDMGPSAVQVCRSFC*SRLCWL Trigger: TAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACA...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTAACAGTGTTGATACCTaGAGCATTTTTCATCTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: AGIQAELTHDMGPSAVQVNSVDT*SIFHLV Trigger: TACAAGATGAAAAATGCTGCAGGTATCAACACTGTT...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR TCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACAGCTTATGTAGAGGAATaGATGCTGATTTCCTTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: TELRGAAMLASRLSSHMTAYVEE*MLISFQ Trigger: CTGAAAGGAAATCAGCATTCATTCCTCTACATAAGC...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACACCAGGTTCAATGGGCTaGAAGACATATCAATATTGT | + |
|
Preference number: 2 (lower is better) Translates to: TELRGAAMLASRLSSHMTPGSMG*KTYQYC Trigger: ACAATATTGATATGTCTTCCAGCCCATTGAACCTGG...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR GCA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTATTGTTCAAGAACATTaGCTTCTGTTATGGAAGATG | + |
|
Preference number: 2 (lower is better) Translates to: KISKFISLLTGLCRGMNAIVQEH*LLLWKM Trigger: CATCTTCCATAACAGAAGGCAATGTTCTTGAACAAT...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR CCA 72 bp | GCAATGCTGGCATCCAGGCTGAGCTCACACATGACATaGGGCCTTCTGCAGTCCAGGTTCAATGGGCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AMLASRLSSHMT*GLLQSRFNGLE Trigger: TTCCAGCCCATTGAACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCTTCCACACCAGCATTTaGACATACAAGGAAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TTRNGTKRSSNAGIQAELFHTSI*TYKEGL Trigger: CAGACCTTCCTTGTATGTCAAAATGCTGGTGTGGAA...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTCTGATACCTATTGCATaGAGAGATGGACTGTTACAT | + |
|
Preference number: 3 (lower is better) Translates to: AGIQAELTHDMGPSAVQVLIPIA*RDGLLH Trigger: ATGTAACAGTCCATCTCTCAATGCAATAGGTATCAG...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTCATTGTTCAAGAACATaGCCTTCTGTTATGGAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: AGIQAELTHDMGPSAVQVHCSRT*PSVMED Trigger: ATCTTCCATAACAGAAGGCAATGTTCTTGAACAATG...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR-3UTR CAA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCATTGGGAACCCTTCTTaGTTCTTGGTTAGTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TTRNGTKRSSNAGIQAELIGNPS*FLVSSF Trigger: AAAGGAACTAACCAAGAACAAAGAAGGGTTCCCAAT...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR CCA 72 bp | ACACATGACATGGGGCCTTCTGCAGTCCAGGTTCAATaGGCTGGAAGACATATCAATATTGTGAAGAAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: THDMGPSAVQVQ*AGRHINIVKKL Trigger: GAGCTTCTTCACAATATTGATATGTCTTCCAGCCCATTGAACCTGGACTGCAGAAGGCCCCATGTCATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR GCA 72 bp | GGGTCAGTCAATATTGGATCTATGCAGTCTGCTTTATaGGTAAATTCCAACAGCCTAAGTTCTAACTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GSVNIGSMQSAL*VNSNSLSSNFK Trigger: TTTGAAGTTAGAACTTAGGCTGTTGGAATTTACGCATAAAGCAGACTGCATAGATCCAATATTGACTGACCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR CCA 72 bp | GAGGTTAAAGAAAGAATAGTTCTGATACTAAAAACCTaGAACACAGCTACGAAAACCCAATCAGCGTTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: EVKERIVLILKT*NTATKTQSAFL Trigger: GAGAAACGCTGATTGGGTTTTCGTAGCTGTGTTCCAGGTTTTTAGTATCAGAACTATTCTTTCTTTAACCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTGATTTGCTGCCTGGCTaGGCCCCAGGGCAGCGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVDLLPG*APGQRR Trigger: TCTGCGCTGCCCTGGGGCTCAGCCAGGCAGCAAATC...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACAGCAAGGATTTGCTaGCTGGCTGAGCCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TTRNGTKRSSNAGIQAELTARIC*LAEPQG Trigger: GCCCTGGGGCTCAGCCAGGCAGCAAATCCTTGCTGT...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTTCACCCCACTCAGGATaGTCCTGCTTGAGTATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVSPHSG*SCLSMS Trigger: CGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGA...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTTTTAAGTCCACTCCATaGCCCAGTCCTCGGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVFKSTP*PSPRVN Trigger: GTTCACCCGAGGACTGGGCCATGGAGTGGACTTAAA...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTCACTCAGGATGCTCCTaGTTGAGTATGTCGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVHSGCS*LSMSHT Trigger: AGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTG...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTTGCAAACATCATATTTaGGCCTTGGGGGTCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVCKHHI*ALGVRD Trigger: ATCCCTGACCCCCAAGGCTCAAATATGATGTTTGCA...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTACTCAACAAACTGAGTaGGTCCATGTTCCAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVTQQTE*VHVPGG Trigger: TCCTCCTGGAACATGGACTCACTCAGTTTGTTGAGT...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTTCATCTAGTCTGGAGTaGGAGGCACTTGCATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVSSSLE*EALALM Trigger: CATCAATGCAAGTGCCTCCCACTCCAGACTAGATGA...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACACCCGAAGCCAGATGGTaGCATACATCATCAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: TELRGAAMLASRLSSHMTPEARW*HTSSDQ Trigger: CTGGTCTGATGATGTATGCCACCATCTGGCTTCGGG...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACAACTGGAACTGCTGGTTaGAAAGGAGCTCTGGGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TELRGAAMLASRLSSHMTTGTAG*KGALGQ Trigger: TTGACCCAGAGCTCCTTTTCAACCAGCAGTTCCAGT...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTTCAGCACATATTTCATaGTTAAACTTCGCAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGIQAELTHDMGPSAVQVSAHIS*LNFAGR Trigger: CCTTCCTGCGAAGTTTAATCATGAAATATGTGCTGA...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACAGGTATTTCATCTCTCTaGTCTGGTCAATGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TELRGAAMLASRLSSHMTGISSL*SGQWRP Trigger: AGGCCTCCATTGACCAGAGCAGAGAGATGAAATACC...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTTTCCCTTCACACCCATaGGAGTTGGGCAGTCATCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLFPSHP*ELGSHL Trigger: CAGATGACTGCCCAACTCCCATGGGTGTGAAGGGAA...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCTTGCAGATGAGAGACTaGATTGAGGCAGTATTGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTRNGTKRSSNAGIQAELLQMRD*IEAVLM Trigger: CATCAATACTGCCTCAATTCAGTCTCTCATCTGCAA...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCTCACATTATTGCAGATaGGAGACTGAATTGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTRNGTKRSSNAGIQAELSHYCR*ETELRQ Trigger: CTGCCTCAATTCAGTCTCTCATCTGCAATAATGTGA...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACATTTCAAGGAGAATGGTaGTCCAAGCTCTACCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: TELRGAAMLASRLSSHMTFQGEW*SKLYHG Trigger: ACCATGGTAGAGCTTGGAGCACCATTCTCCTTGAAA...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCGTAGGCTGTGGATCTTaGACATTGAAAGAAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTRNGTKRSSNAGIQAELVGCGS*TLKEVK Trigger: CTTCACTTCTTTCAATGTGCAAGATCCACAGCCTAC...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACAATGAGTCTGCTGGTTTaGAATAGTTGCTCATCACCC | + |
|
Preference number: 4 (lower is better) Translates to: TELRGAAMLASRLSSHMTMSLLV*NSCSSP Trigger: GGGTGATGAGCAACTATTCCAAACCAGCAGACTCAT...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCCAGGATGCTCCTGCTTaGGTATGTCGCACACTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSQDAPA*VCRTLC Trigger: ACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTG...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCGGAGGCCTTTGCCACTaGTTGTACAGCAATTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSGGLCH*LYSNWH Trigger: GTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCC...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTGAGGGCTTTCAATTCTaGAGCCATTTCCTTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLEGFQF*SHFLLS Trigger: GGAGAGAAGGAAATGGCTGCAGAATTGAAAGCCCTC...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACAGGTTTTGACATGGATTaGAACAGCAAGGATTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TELRGAAMLASRLSSHMTGFDMD*NSKDLL Trigger: CAGCAAATCCTTGCTGTTCCAATCCATGTCAAAACC...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCGCTCCCGAAGCCAGATaGTGGCATACATCATCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSAPEAR*WHTSSD Trigger: GTCTGATGATGTATGCCACCATCTGGCTTCGGGAGC...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCGTTGAAAAGGAGCTCTaGGTCAAACTTGAGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TTRNGTKRSSNAGIQAELVEKEL*VKLEFE Trigger: TTCAAACTCAAGTTTGACCCAGAGCTCCTTTTCAAC...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTTGCTTGTACAGCAATTaGCACATTTCTTCCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLCLYSN*HISSPS Trigger: GCTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCA...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTCCCAAAGATAGCATCTaGACGAGGTTTTTCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLPKDSI*TRFFHQ Trigger: CTGGTGGAAAAACCTCGTCCAGATGCTATCTTTGGG...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR CAA 72 bp | AGCAGCACGGGCTCCACCACCTTCCACACCAGCATTTaGACATACAAGGAAGGTCTGATTGTCATAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTGSTTFHTSI*TYKEGLIVIVS Trigger: ACTTACTATGACAATCAGACCTTCCTTGTATGTCAAAATGCTGGTGTGGAAGGTGGTGGAGCCCGTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCTGTTCCAGACTCCCTTaGAGTGGGTCAGGATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSCSRLP*SGSGCS Trigger: ACTACATCCTGACCCACTTCAAGGGAGTCTGGAACA...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTAATGACTCAACAAACTaGGTGAGTCCATGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLNDSTN*VSPCSR Trigger: CCTGGAACATGGACTCACTCAGTTTGTTGAGTCATT...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTTCCTTTCAAGGAGAATaGTGCTCCAAGCTCTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLSFQGE*CSKLYH Trigger: ATGGTAGAGCTTGGAGCACCATTCTCCTTGAAAGGA...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCCAGGGTACAGTTCCATaGCATCGATGTCACTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSQGTVP*HRCHCR Trigger: TCTACAGTGACATCGATGTCATGGAACTGTACCCTG...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTCAAGGATTTGCTGCCTaGCTGAGCCCCAGGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KISKFISLLTGLCRGMNAQGFAA*LSPRAA Trigger: CGCTGCCCTGGGGCTCAGCCAGGCAGCAAATCCTTG...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTTCTCCACCAATGACCTaGTATTTCAATTTTCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLSPPMT*YFNFPS Trigger: GGATGGAAAATTGAAATATCAGGTCATTGGTGGAGA...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCAGTGATAGAGTGTGTTaGATTCAGAGGCAATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSSDRVC*IQRQCG Trigger: ACCGCATTGCCTCTGAATTCAACACACTCTATCACT...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCATCATATTTGAGCCTTaGGGGTCAGGGATGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSIIFEP*GSGMNS Trigger: AGAGTTCATCCCTGACCCCCAAGGCTCAAATATGAT...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTGCTTCAGCAGTAATTTaGTTCTTGTCAGAAATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLASAVI*FLSEIQ Trigger: CTGAATTTCTGACAAGAATCAAATTACTGCTGAAGC...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCACACCTCTCCACCAATaGCCTGATATTTCAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FVEAFVALGFAGYHSSTSTPLHQ*PDISIF Trigger: GAAAATTGAAATATCAGGTCATTGGTGGAGAGGTGT...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTCATTCCCCACGGTTTTaGCATGGATTGGAACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KISKFISLLTGLCRGMNAHSPRF*HGLEQQ Trigger: TTGCTGTTCCAATCCATGTCAAAACCGTGGGGAATG...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR GCA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTACTGGTCAAATCCTGTaGTCATACATTCCCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: KISKFISLLTGLCRGMNATGQIL*SYIPHG Trigger: ACCGTGGGGAATGTATGAGCACAGGATTTGACCAGT...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| 3UTR CAA 72 bp | GGACAAACACCGGAGGGAATCTTCACAAATGTAACATaGTTCAAGAACATTGCCTTCTGTTATGGAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GQTPEGIFTNVT*FKNIAFCYGRC Trigger: ACATCTTCCATAACAGAAGGCAATGTTCTTGAACAATGTTACATTTGTGAAGATTCCCTCCGGTGTTTGTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CCA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTTACTCATTGAGAGACTaGTATTTCATCTCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KISKFISLLTGLCRGMNAYSLRD*YFISLL Trigger: GAGCAGAGAGATGAAATACCAGTCTCTCAATGAGTA...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR TCA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTTCAATTTTCCATCCTTaGAAAGGCGCAGTTTATGTT | + |
|
Preference number: 4 (lower is better) Translates to: KISKFISLLTGLCRGMNASIFHP*KGAVYV Trigger: AACATAAACTGCGCCTTTTCAAGGATGGAAAATTGA...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 90 bp | CCCCACTCAGGATGCTCCTGCTTGAGTATGTCGCACACTCTGTTGTaGTCCCGAAGCCAGATGGTGGCATACATCATCAGACCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PHSGCSCLSMSHTLL*SRSQMVAYIIRPGT Trigger: GGTGCCTGGTCTGATGATGTATGCCACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 90 bp | CACCCATGGGAGTTGGGCAGTCATCTGCTACGGGAGGAAGGGCCCTaGTGTAGTAGGAGAGGTTGGAGAAGGCTTCCCAGCTTTTGTAAC | + |
|
Preference number: 5 (lower is better) Translates to: HPWELGSHLLREEGP*CSRRGWRRLPSFCN Trigger: GTTACAAAAGCTGGGAAGCCTTCTCCAACCTCTCCTACTACACCAGGGCCCTTCCTCCCGTAGCAGATGACTGCCCAACTCCCATGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTGGTCAATGGAGGCCTTaGCCACTGCTTGTACAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AGIQAELTHDMGPSAVQVGQWRP*PLLVQQ Trigger: TTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACC...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTCTGCTTGTACAGCAATaGGCACATTTCTTCCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AGIQAELTHDMGPSAVQVLLVQQ*AHFFPQ Trigger: CTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCAG...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 90 bp | AAGCTCCTTATTTCCCTTCACACCCATGGGAGTTGGGCAGTCATCTaGTACGGGAGGAAGGGCCCTGGTGTAGTAGGAGAGGTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: KLLISLHTHGSWAVI*YGRKGPGVVGEVGE Trigger: TTCTCCAACCTCTCCTACTACACCAGGGCCCTTCCTCCCGTAGCAGATGACTGCCCAACTCCCATGGGTGTGAAGGGAAATAAGGAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 90 bp | TCTGCTCTGGTCAATGGAGGCCTTTGCCACTGCTTGTACAGCAATTaGCACATTTCTTCCCCCAGCAACCCGGCCAGCAATCTGTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SALVNGGLCHCLYSN*HISSPSNPASNLSG Trigger: ACCAGACAGATTGCTGGCCGGGTTGCTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | TGGTTTGGAATAGTTGCTCATCACCCCACTCAGGATGCTCCTGCTTaGGTATGTCGCACACTCTGTTGTGCTCCCGAAGCCAGATGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WFGIVAHHPTQDAPA*VCRTLCCAPEARWW Trigger: CCACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 90 bp | CTGCTGGTTTGGAATAGTTGCTCATCACCCCACTCAGGATGCTCCTaGTTGAGTATGTCGCACACTCTGTTGTGCTCCCGAAGCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLVWNSCSSPHSGCS*LSMSHTLLCSRSQM Trigger: CATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 90 bp | ATGAGTCTGCTGGTTTGGAATAGTTGCTCATCACCCCACTCAGGATaGTCCTGCTTGAGTATGTCGCACACTCTGTTGTGCTCCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MSLLVWNSCSSPHSG*SCLSMSHTLLCSRS Trigger: GCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCAGCAGACTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | ACCACGAGAAACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCAAGGCGCAGTTTATGTaGTCTGTCCAGAGTTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TTRNGTKRSSNAGIQAELKAQFM*SVQSFT Trigger: GGTGAAACTCTGGACAGACAACATAAACTGCGCCTT...GAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGTTTCTCGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | AACTTCGCAGGAAGGGGATGTTGTTCACAATGTTCCAGACTCCCTTaGAGTGGGTCAGGATGTAGTGCACTGTGTTTGGGGTGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NFAGRGCCSQCSRLP*SGSGCSALCLGWAS Trigger: TGAAGCCCACCCCAAACACAGTGCACTACATCCTGACCCACTTCAAGGGAGTCTGGAACATTGTGAACAACATCCCCTTCCTGCGAAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | CACATTTCTTCCCCCAGCAACCCGGCCAGCAATCTGTCTGGTGAATaGCTCAACAAACTGAGTGAGTCCATGTTCCAGGAGGATGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: HISSPSNPASNLSGE*LNKLSESMFQEDGV Trigger: AACTCCATCCTCCTGGAACATGGACTCACTCAGTTTGTTGAGTCATTCACCAGACAGATTGCTGGCCGGGTTGCTGGGGGAAGAAATGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 90 bp | GTGTACGGCTTCAGGGAGAAGCGTTTGCGGTACTCATTGAGAGACTaGTATTTCATCTCTCTGCTCTGGTCAATGGAGGCCTTTGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: VYGFREKRLRYSLRD*YFISLLWSMEAFAT Trigger: AGTGGCAAAGGCCTCCATTGACCAGAGCAGAGAGATGAAATACCAGTCTCTCAATGAGTACCGCAAACGCTTCTCCCTGAAGCCGTACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGCATCCAGGCTGAGCTCACACATGACATGGGGCCTTCTGCAGTCCAGGTTTTTCCAGCACTTCTTTaGAATCAGGAAGCTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: AGIQAELTHDMGPSAVQVFPALL*NQEAPY Trigger: ATAAGGAGCTTCCTGATTCAAAAGAAGTGCTGGAAA...AACCTGGACTGCAGAAGGCCCCATGTCATGTGTGAGCTCAGCCTGGATGCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | CATCTGGACGAGGTTTTTCCACCAGCAGGGCAGGGTACAGTTCCATaGCATCGATGTCACTGTAGAGGGCTTTCAATTCTGCAGCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: HLDEVFPPAGQGTVP*HRCHCRGLSILQPF Trigger: AAATGGCTGCAGAATTGAAAGCCCTCTACAGTGACATCGATGTCATGGAACTGTACCCTGCCCTGCTGGTGGAAAAACCTCGTCCAGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 90 bp | GAGAGACTGGTATTTCATCTCTCTGCTCTGGTCAATGGAGGCCTTTaGCACTGCTTGTACAGCAATTGGCACATTTCTTCCCCCAGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ERLVFHLSALVNGGL*HCLYSNWHISSPSN Trigger: GTTGCTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGAGAGATGAAATACCAGTCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 90 bp | CGTTTGCGGTACTCATTGAGAGACTGGTATTTCATCTCTCTGCTCTaGTCAATGGAGGCCTTTGCCACTGCTTGTACAGCAATTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RLRYSLRDWYFISLL*SMEAFATACTAIGT Trigger: TGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGAGAGATGAAATACCAGTCTCTCAATGAGTACCGCAAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCTGTAGTGCACTGTGTTaGGGGTGGGCTTCAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FVEAFVALGFAGYHSSTSCSALC*GWASAV Trigger: TACTGCTGAAGCCCACCCCAAACACAGTGCACTACA...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 90 bp | TTGATAGTCTCTCCTATGAGTATGAGTCTGCTGGTTTGGAATAGTTaGTCATCACCCCACTCAGGATGCTCCTGCTTGAGTATGTCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LIVSPMSMSLLVWNS*SSPHSGCSCLSMSH Trigger: GTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCAGCAGACTCATACTCATAGGAGAGACTATCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 90 bp | CGCCTTTTGATTAGTACTGTAGGGTTAATGTCATCTAGTCTGGAGTaGGAGGCACTTGCATTGATGGTGGCTGTTTTGGTAGGCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RLLISTVGLMSSSLE*EALALMVAVLVGCG Trigger: TCCACAGCCTACCAAAACAGCCACCATCAATGCAAGTGCCTCCCACTCCAGACTAGATGACATTAACCCTACAGTACTAATCAAAAGGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCTACTGGAACTGCTGGTaGAAAAGGAGCTCTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FVEAFVALGFAGYHSSTSYWNCW*KRSSGS Trigger: TGACCCAGAGCTCCTTTTCAACCAGCAGTTCCAGTA...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTTGTGGATCTTGCACATaGAAAGAAGTGAAGGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLCGSCT*KEVKGH Trigger: GTGTCCCTTCACTTCTTTCAATGTGCAAGATCCACA...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 90 bp | AGAATCCAGTCCGGGTACAGTCACACTTATACTGGTCAAATCCTGTaGTCATACATTCCCCACGGTTTTGACATGGATTGGAACAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RIQSGYSHTYTGQIL*SYIPHGFDMDWNSK Trigger: CTTGCTGTTCCAATCCATGTCAAAACCGTGGGGAATGTATGAGCACAGGATTTGACCAGTATAAGTGTGACTGTACCCGGACTGGATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | ACGGAACTAAGAGGAGCAGCAATGCTGGCATCCAGGCTGAGCTCACACATGACAGGCTTCAGCAGTAATTaGATTCTTGTCAGAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: TELRGAAMLASRLSSHMTGFSSN*ILVRNS Trigger: TGAATTTCTGACAAGAATCAAATTACTGCTGAAGCC...TGTCATGTGTGAGCTCAGCCTGGATGCCAGCATTGCTGCTCCTCTTAGTTCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCCGTTTGCGGTACTCATaGAGAGACTGGTATTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FVEAFVALGFAGYHSSTSRLRYS*RDWYFI Trigger: GATGAAATACCAGTCTCTCAATGAGTACCGCAAACG...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | TTTCAATTCTGCAGCCATTTCCTTCTCTCCTGTAAGTTCTTCAAATaGTGTGTACGGCTTCAGGGAGAAGCGTTTGCGGTACTCATTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FQFCSHFLLSCKFFK*CVRLQGEAFAVLIE Trigger: CTCAATGAGTACCGCAAACGCTTCTCCCTGAAGCCGTACACATCATTTGAAGAACTTACAGGAGAGAAGGAAATGGCTGCAGAATTGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | AGTGAAGGGACACCCCTTCACATTATTGCAGATGAGAGACTGAATTaGGGCAGTATTGATGATCTTAAAACCCACTTCGCCTCCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SEGTPLHIIADERLN*GSIDDLKTHFASKG Trigger: ACCTTTGGAGGCGAAGTGGGTTTTAAGATCATCAATACTGCCTCAATTCAGTCTCTCATCTGCAATAATGTGAAGGGGTGTCCCTTCACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTTCACACCCATGGGAGTaGGGCAGTCATCTGCTACGG | + |
|
Preference number: 5 (lower is better) Translates to: KISKFISLLTGLCRGMNASHPWE*GSHLLR Trigger: CCGTAGCAGATGACTGCCCAACTCCCATGGGTGTGA...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | GCTTTAAAGCTCACACTCATAGTTAAGACAGAGCAGCACGGGCTCCACCACCTTTTCAATTTTCCATCCTaGAAAAGGCGCAGTTTATGT | + |
|
Preference number: 5 (lower is better) Translates to: ALKLTLIVKTEQHGLHHLFNFPS*KRRSLC Trigger: ACATAAACTGCGCCTTTTCAAGGATGGAAAATTGAA...AAGGTGGTGGAGCCCGTGCTGCTCTGTCTTAACTATGAGTGTGAGCTTTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | AAAGAAGTGAAGGGACACCCCTTCACATTATTGCAGATGAGAGACTaGATTGAGGCAGTATTGATGATCTTAAAACCCACTTCGCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KEVKGHPFTLLQMRD*IEAVLMILKPTSPP Trigger: TGGAGGCGAAGTGGGTTTTAAGATCATCAATACTGCCTCAATTCAGTCTCTCATCTGCAATAATGTGAAGGGGTGTCCCTTCACTTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | TTTGTAGAAGCTTTTGTTGCTCTAGGCTTTGCTGGCTACCACTCATCAACGAGCTCTTCGATCACTATCTaGATAGTCTCTCCTATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: FVEAFVALGFAGYHSSTSSSITI*IVSPMS Trigger: ACTCATAGGAGAGACTATCAAGATAGTGATCGAAGA...GCTCGTTGATGAGTGGTAGCCAGCAAAGCCTAGAGCAACAAAAGCTTCTACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTTTCAGGGAGAAGCGTTaGCGGTACTCATTGAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KISKFISLLTGLCRGMNAFREKR*RYSLRD Trigger: GTCTCTCAATGAGTACCGCAAACGCTTCTCCCTGAA...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS-3UTR CAA 90 bp | AAGATATCAAAATTCATTTCCCTTCTCACTGGCTTATGTAGAGGAATGAATGCTGCTCGGCTTCCAGTATaGAGGAGAACAGATGGGATT | + |
|
Preference number: 5 (lower is better) Translates to: KISKFISLLTGLCRGMNAARLPV*RRTDGI Trigger: AATCCCATCTGTTCTCCTCAATACTGGAAGCCGAGC...AGCATTCATTCCTCTACATAAGCCAGTGAGAAGGGAAATGAATTTTGATATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 90 bp | GTGGACTGTCAATCAAATATGATCTGGATGTCAGCACATATTTCATaGTTAAACTTCGCAGGAAGGGGATGTTGTTCACAATGTTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VDCQSNMIWMSAHIS*LNFAGRGCCSQCSR Trigger: TCTGGAACATTGTGAACAACATCCCCTTCCTGCGAAGTTTAATCATGAAATATGTGCTGACATCCAGATCATATTTGATTGACAGTCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 72 bp | CCCACGGTTTTGACATGGATTGGAACAGCAAGGATTTaGTGCCTGGCTGAGCCCCAGGGCAGCGCAGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PTVLTWIGTARI*CLAEPQGSAEQ Trigger: CTGCTCTGCGCTGCCCTGGGGCTCAGCCAGGCAGCAAATCCTTGCTGTTCCAATCCATGTCAAAACCGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 72 bp | GAGTTGGGCAGTCATCTGCTACGGGAGGAAGGGCCCTaGTGTAGTAGGAGAGGTTGGAGAAGGCTTCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ELGSHLLREEGP*CSRRGWRRLPS Trigger: GCTGGGAAGCCTTCTCCAACCTCTCCTACTACACCAGGGCCCTTCCTCCCGTAGCAGATGACTGCCCAACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 72 bp | ATTTCCCTTCACACCCATGGGAGTTGGGCAGTCATCTaGTACGGGAGGAAGGGCCCTGGTGTAGTAGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ISLHTHGSWAVI*YGRKGPGVVGE Trigger: CTCTCCTACTACACCAGGGCCCTTCCTCCCGTAGCAGATGACTGCCCAACTCCCATGGGTGTGAAGGGAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 72 bp | AGGAAGCTCCTTATTTCCCTTCACACCCATGGGAGTTaGGCAGTCATCTGCTACGGGAGGAAGGGCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RKLLISLHTHGS*AVICYGRKGPG Trigger: ACCAGGGCCCTTCCTCCCGTAGCAGATGACTGCCCAACTCCCATGGGTGTGAAGGGAAATAAGGAGCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | TCACCCCACTCAGGATGCTCCTGCTTGAGTATGTCGCACACTCTGTaGTGCTCCCGAAGCCAGATGGTGGCATACATCATCAGACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: SPHSGCSCLSMSHTL*CSRSQMVAYIIRPG Trigger: GCCTGGTCTGATGATGTATGCCACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | CTCTGCTCTGGTCAATGGAGGCCTTTGCCACTGCTTGTACAGCAATaGGCACATTTCTTCCCCCAGCAACCCGGCCAGCAATCTGTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LCSGQWRPLPLLVQQ*AHFFPQQPGQQSVW Trigger: CCAGACAGATTGCTGGCCGGGTTGCTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | GGTCAATGGAGGCCTTTGCCACTGCTTGTACAGCAATaGGCACATTTCTTCCCCCAGCAACCCGGCCAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GQWRPLPLLVQQ*AHFFPQQPGQQ Trigger: TTGCTGGCCGGGTTGCTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 72 bp | ATAGTTGCTCATCACCCCACTCAGGATGCTCCTGCTTaGGTATGTCGCACACTCTGTTGTGCTCCCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: IVAHHPTQDAPA*VCRTLCCAPEA Trigger: GGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 72 bp | TGTCGCACACTCTGTTGTGCTCCCGAAGCCAGATGGTaGCATACATCATCAGACCAGGCACCAGACCAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CRTLCCAPEARW*HTSSDQAPDQR Trigger: TCTTTGGTCTGGTGCCTGGTCTGATGATGTATGCCACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 72 bp | GTATGTCGCACACTCTGTTGTGCTCCCGAAGCCAGATaGTGGCATACATCATCAGACCAGGCACCAGACCAA | + |
|
Preference number: 6 (lower is better) Translates to: VCRTLCCAPEAR*WHTSSDQAPDQ Trigger: TTGGTCTGGTGCCTGGTCTGATGATGTATGCCACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | CTGGTTTGGAATAGTTGCTCATCACCCCACTCAGGATGCTCCTGCTaGAGTATGTCGCACACTCTGTTGTGCTCCCGAAGCCAGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVWNSCSSPHSGCSC*SMSHTLLCSRSQMV Trigger: CACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | GTATTTCATCTCTCTGCTCTGGTCAATGGAGGCCTTTGCCACTGCTaGTACAGCAATTGGCACATTTCTTCCCCCAGCAACCCGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VFHLSALVNGGLCHC*YSNWHISSPSNPAS Trigger: GCTGGCCGGGTTGCTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGAGAGATGAAATAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 72 bp | GGATGCTCCTGCTTGAGTATGTCGCACACTCTGTTGTaGTCCCGAAGCCAGATGGTGGCATACATCATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: GCSCLSMSHTLL*SRSQMVAYIIR Trigger: TCTGATGATGTATGCCACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 72 bp | TGGAATAGTTGCTCATCACCCCACTCAGGATGCTCCTaGTTGAGTATGTCGCACACTCTGTTGTGCTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: WNSCSSPHSGCS*LSMSHTLLCSR Trigger: TCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | TCAGGATGCTCCTGCTTGAGTATGTCGCACACTCTGTaGTGCTCCCGAAGCCAGATGGTGGCATACATCATC | + |
|
Preference number: 6 (lower is better) Translates to: SGCSCLSMSHTL*CSRSQMVAYII Trigger: GATGATGTATGCCACCATCTGGCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | AATAGTTGCTCATCACCCCACTCAGGATGCTCCTGCTaGAGTATGTCGCACACTCTGTTGTGCTCCCGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSCSSPHSGCSC*SMSHTLLCSRS Trigger: GCTTCGGGAGCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | CTCTCTGCTCTGGTCAATGGAGGCCTTTGCCACTGCTaGTACAGCAATTGGCACATTTCTTCCCCCAGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LSALVNGGLCHC*YSNWHISSPSN Trigger: GTTGCTGGGGGAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 72 bp | GGAAGGGGATGTTGTTCACAATGTTCCAGACTCCCTTaGAGTGGGTCAGGATGTAGTGCACTGTGTTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRGCCSQCSRLP*SGSGCSALCLG Trigger: CCCCAAACACAGTGCACTACATCCTGACCCACTTCAAGGGAGTCTGGAACATTGTGAACAACATCCCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035065.9 ENSMUST00000190784.2 |
||
| CDS GCA 72 bp | CTGGTTTGGAATAGTTGCTCATCACCCCACTCAGGATaGTCCTGCTTGAGTATGTCGCACACTCTGTTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: LVWNSCSSPHSG*SCLSMSHTLLC Trigger: GCACAACAGAGTGTGCGACATACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 72 bp | CGGCCAGCAATCTGTCTGGTGAATGACTCAACAAACTaGGTGAGTCCATGTTCCAGGAGGATGGAGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: RPAICLVNDSTN*VSPCSRRMELL Trigger: CAACAACTCCATCCTCCTGGAACATGGACTCACTCAGTTTGTTGAGTCATTCACCAGACAGATTGCTGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 72 bp | GAGGTTTTTCCACCAGCAGGGCAGGGTACAGTTCCATaGCATCGATGTCACTGTAGAGGGCTTTCAATTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EVFPPAGQGTVP*HRCHCRGLSIL Trigger: CAGAATTGAAAGCCCTCTACAGTGACATCGATGTCATGGAACTGTACCCTGCCCTGCTGGTGGAAAAACCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | CTGGAGTGGGAGGCACTTGCATTGATGGTGGCTGTTTaGGTAGGCTGTGGATCTTGCACATTGAAAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LEWEALALMVAV*VGCGSCTLKEV Trigger: CACTTCTTTCAATGTGCAAGATCCACAGCCTACCAAAACAGCCACCATCAATGCAAGTGCCTCCCACTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | ACACTTATACTGGTCAAATCCTGTGCTCATACATTCCCCACGGTTTaGACATGGATTGGAACAGCAAGGATTTGCTGCCTGGCTGAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: TLILVKSCAHTFPTV*TWIGTARICCLAEP Trigger: GGGCTCAGCCAGGCAGCAAATCCTTGCTGTTCCAATCCATGTCAAAACCGTGGGGAATGTATGAGCACAGGATTTGACCAGTATAAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | TCATCTAGTCTGGAGTGGGAGGCACTTGCATTGATGGTGGCTGTTTaGGTAGGCTGTGGATCTTGCACATTGAAAGAAGTGAAGGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SSSLEWEALALMVAV*VGCGSCTLKEVKGH Trigger: GTGTCCCTTCACTTCTTTCAATGTGCAAGATCCACAGCCTACCAAAACAGCCACCATCAATGCAAGTGCCTCCCACTCCAGACTAGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 72 bp | TCTCCTATGAGTATGAGTCTGCTGGTTTGGAATAGTTaGTCATCACCCCACTCAGGATGCTCCTGCTTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SPMSMSLLVWNS*SSPHSGCSCLS Trigger: ACTCAAGCAGGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCAGCAGACTCATACTCATAGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | CTGGTCAAATCCTGTGCTCATACATTCCCCACGGTTTaGACATGGATTGGAACAGCAAGGATTTGCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVKSCAHTFPTV*TWIGTARICCL Trigger: CAGGCAGCAAATCCTTGCTGTTCCAATCCATGTCAAAACCGTGGGGAATGTATGAGCACAGGATTTGACCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | TTAATGTCATCTAGTCTGGAGTGGGAGGCACTTGCATaGATGGTGGCTGTTTTGGTAGGCTGTGGATCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LMSSSLEWEALA*MVAVLVGCGSC Trigger: GCAAGATCCACAGCCTACCAAAACAGCCACCATCAATGCAAGTGCCTCCCACTCCAGACTAGATGACATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | GGAGGCACTTGCATTGATGGTGGCTGTTTTGGTAGGCTGTGGATCTaGCACATTGAAAGAAGTGAAGGGACACCCCTTCACATTATTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GGTCIDGGCFGRLWI*HIERSEGTPLHIIA Trigger: TGCAATAATGTGAAGGGGTGTCCCTTCACTTCTTTCAATGTGCAAGATCCACAGCCTACCAAAACAGCCACCATCAATGCAAGTGCCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 90 bp | CCTGTAAGTTCTTCAAATGATGTGTACGGCTTCAGGGAGAAGCGTTaGCGGTACTCATTGAGAGACTGGTATTTCATCTCTCTGCTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSSSNDVYGFREKR*RYSLRDWYFISLLW Trigger: CCAGAGCAGAGAGATGAAATACCAGTCTCTCAATGAGTACCGCAAACGCTTCTCCCTGAAGCCGTACACATCATTTGAAGAACTTACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 72 bp | TGCAGCCATTTCCTTCTCTCCTGTAAGTTCTTCAAATaGTGTGTACGGCTTCAGGGAGAAGCGTTTGCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CSHFLLSCKFFK*CVRLQGEAFAV Trigger: TACCGCAAACGCTTCTCCCTGAAGCCGTACACATCATTTGAAGAACTTACAGGAGAGAAGGAAATGGCTGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 72 bp | TCCGGGTACAGTCACACTTATACTGGTCAAATCCTGTaGTCATACATTCCCCACGGTTTTGACATGGATTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGYSHTYTGQIL*SYIPHGFDMDW Trigger: CCAATCCATGTCAAAACCGTGGGGAATGTATGAGCACAGGATTTGACCAGTATAAGTGTGACTGTACCCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS GCA 72 bp | GTATTTCATCTCTCTGCTCTGGTCAATGGAGGCCTTTaGCACTGCTTGTACAGCAATTGGCACATTTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VFHLSALVNGGL*HCLYSNWHISS Trigger: GGAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGAGAGATGAAATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 72 bp | TTGATAGTCTCTCCTATGAGTATGAGTCTGCTGGTTTaGAATAGTTGCTCATCACCCCACTCAGGATGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LIVSPMSMSLLV*NSCSSPHSGCS Trigger: GGAGCATCCTGAGTGGGGTGATGAGCAACTATTCCAAACCAGCAGACTCATACTCATAGGAGAGACTATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | GGTATTTCATCTCTCTGCTCTGGTCAATGGAGGCCTTaGCCACTGCTTGTACAGCAATTGGCACATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GISSLCSGQWRP*PLLVQQLAHFF Trigger: GAAGAAATGTGCCAATTGCTGTACAAGCAGTGGCAAAGGCCTCCATTGACCAGAGCAGAGAGATGAAATACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | ATGGTGGCTGTTTTGGTAGGCTGTGGATCTTGCACATaGAAAGAAGTGAAGGGACACCCCTTCACATTATTG | + |
|
Preference number: 6 (lower is better) Translates to: MVAVLVGCGSCT*KEVKGHPFTLL Trigger: CAATAATGTGAAGGGGTGTCCCTTCACTTCTTTCAATGTGCAAGATCCACAGCCTACCAAAACAGCCACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CCA 72 bp | ATTAGTACTGTAGGGTTAATGTCATCTAGTCTGGAGTaGGAGGCACTTGCATTGATGGTGGCTGTTTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: ISTVGLMSSSLE*EALALMVAVLV Trigger: TACCAAAACAGCCACCATCAATGCAAGTGCCTCCCACTCCAGACTAGATGACATTAACCCTACAGTACTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | GTCAAACTTGAGTTTGAAGTGGTAACCGCTCAGGTGTaGCACGTAGTCTTCGATCACTATCTTGATAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VKLEFEVVTAQV*HVVFDHYLDSL Trigger: GAGACTATCAAGATAGTGATCGAAGACTACGTGCAACACCTGAGCGGTTACCACTTCAAACTCAAGTTTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | TCTTCAAATGATGTGTACGGCTTCAGGGAGAAGCGTTaGCGGTACTCATTGAGAGACTGGTATTTCATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSNDVYGFREKR*RYSLRDWYFIS Trigger: AGAGATGAAATACCAGTCTCTCAATGAGTACCGCAAACGCTTCTCCCTGAAGCCGTACACATCATTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS CAA 72 bp | ACATATTTCATGATTAAACTTCGCAGGAAGGGGATGTaGTTCACAATGTTCCAGACTCCCTTGAAGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TYFMIKLRRKGM*FTMFQTPLKWV Trigger: GACCCACTTCAAGGGAGTCTGGAACATTGTGAACAACATCCCCTTCCTGCGAAGTTTAATCATGAAATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||
| CDS TCA 72 bp | AAGGGACACCCCTTCACATTATTGCAGATGAGAGACTaGATTGAGGCAGTATTGATGATCTTAAAACCCACT | + |
|
Preference number: 6 (lower is better) Translates to: KGHPFTLLQMRD*IEAVLMILKPT Trigger: AGTGGGTTTTAAGATCATCAATACTGCCTCAATTCAGTCTCTCATCTGCAATAATGTGAAGGGGTGTCCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035065.9 |
||