Pregenerated sensors for PTGS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047250Ensembl transcript IDs: ENSMUST00000062069.6
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAACAGCTGCCACAAGCAAAGATCTGGATGGGGATAGAACTGTGGTaGTTTCCAACCAAGATCATAGATGAGTCCATCTGTTCCCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: KQLPQAKIWMGIELW*FPTKIIDESICSLH Trigger: GTGGAGGGAACAGATGGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGCTTGTGGCAGCTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 90 bp | GAGAAACAGCTGCCACAAGCAAAGATCTGGATGGGGATAGAACTGTaGTGGTTTCCAACCAAGATCATAGATGAGTCCATCTGTTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: EKQLPQAKIWMGIEL*WFPTKIIDESICSL Trigger: GAGGGAACAGATGGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGCTTGTGGCAGCTGTTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR TCA 90 bp | CTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATaGGTCCATCTGTTCCCTCCACATCTTTGGAAAGAGTCTAAGTGT | + |
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Preference number: 1 (lower is better) Translates to: LDGDRTVVVSNQDHR*VHLFPPHLWKESKC Trigger: ACACTTAGACTCTTTCCAAAGATGTGGAGGGAACAGATGGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR GCA 90 bp | AAGGGTAAGACCCAAAGTTTCAAATGTGAGCATCAGCTCTCACAATaGCAAGCCACGAAAACCCACATCAAGGACTGTCTTCATCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: KGKTQSFKCEHQLSQ*QATKTHIKDCLHQE Trigger: TTCCTGATGAAGACAGTCCTTGATGTGGGTTTTCGTGGCTTGGCATTGTGAGAGCTGATGCTCACATTTGAAACTTTGGGTCTTACCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 90 bp | TTTGGCGTAGACGTAGGTTTGGGCAAGGCAATTCTTGCTGGACACTaGGTTCTTTTGTTCTGTGTCCATTTCACTGAACAGGAAAATGAA | + |
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Preference number: 1 (lower is better) Translates to: FGVDVGLGKAILAGH*VLLFCVHFTEQENE Trigger: TTCATTTTCCTGTTCAGTGAAATGGACACAGAACAAAAGAACCCAGTGTCCAGCAAGAATTGCCTTGCCCAAACCTACGTCTACGCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 90 bp | ACTGAACAGGAAAATGAACCAATTCCACATTCTAGACATTCAAGTTaGGAATGTTTTGGCCCATGTTATAGATCATTGACCAGGAACAGG | + |
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Preference number: 1 (lower is better) Translates to: TEQENEPIPHSRHSS*ECFGPCYRSLTRNR Trigger: CCTGTTCCTGGTCAATGATCTATAACATGGGCCAAAACATTCCCAACTTGAATGTCTAGAATGTGGAATTGGTTCATTTTCCTGTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTGGCTCCCAAGAACACCTTACTGCCTTGACCTTTGGCGTAGACGTAGGTTCCCAGAGATCCAACTaGCTCTGCCTTCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: KCGSQEHLTALTFGVDVGSQRSN*LCLPSA Trigger: AGCACTTGGAAGGCAGAGGCAGTTGGATCTCTGGGA...ACCTACGTCTACGCCAAAGGTCAAGGCAGTAAGGTGTTCTTGGGAGCCACACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR GCA 90 bp | CCTAGAACTCACTATATAGGCCAAACTGGCCTCAAACTCCCAGAGATCCAACTGCATCAGCTCTCACAATaGCAAGCCACGAAAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: PRTHYIGQTGLKLPEIQLHQLSQ*QATKTH Trigger: GTGGGTTTTCGTGGCTTGGCATTGTGAGAGCTGATG...CAGTTGGATCTCTGGGAGTTTGAGGCCAGTTTGGCCTATATAGTGAGTTCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATGAGTCCCAAAGAGCCAAGTTCTaGGGAGGCAGACAAAACCAC | + |
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Preference number: 2 (lower is better) Translates to: IWMGIELWWFPTKIIDESQRAKF*GGRQNH Trigger: GTGGTTTTGTCTGCCTCCTCAGAACTTGGCTCTTTG...GGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR TCA 90 bp | CATCTTTGGAAAGAGTCTAAGTGTGGCTCCCAAGAACACCTTACTGCCTTGACCCCAAAGTTTCAAATGTaGGCATCAGCTCTCACAATG | + |
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Preference number: 2 (lower is better) Translates to: HLWKESKCGSQEHLTALTPKFQM*ASALTM Trigger: CATTGTGAGAGCTGATGCTCACATTTGAAACTTTGG...GGTCAAGGCAGTAAGGTGTTCTTGGGAGCCACACTTAGACTCTTTCCAAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CAA 90 bp | GACGTAGGTTTGGGCAAGGCAATTCTTGCTGGACACTGGGTTCTTTaGTTCTGTGTCCATTTCACTGAACAGGAAAATGAACCAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: DVGLGKAILAGHWVL*FCVHFTEQENEPIP Trigger: TGGAATTGGTTCATTTTCCTGTTCAGTGAAATGGACACAGAACAAAAGAACCCAGTGTCCAGCAAGAATTGCCTTGCCCAAACCTACGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR CCA 90 bp | GCAAAGATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATATTCTTGCTGGACACTaGGTTCTTTTGTTCTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: AKIWMGIELWWFPTKIIDILAGH*VLLFCV Trigger: GACACAGAACAAAAGAACCCAGTGTCCAGCAAGAAT...ATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR TCA 90 bp | ATAGTCAACATTCTGAAGAGGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCAATCAACCAGAAATCTaGCTTTCTGAGTTGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: IVNILKRPPNSRKKIEDPNQPEI*LSELPT Trigger: TGTTGGCAACTCAGAAAGTCAGATTTCTGGTTGATT...GGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCCTCTTCAGAATGTTGACTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR CCA 90 bp | ATCATAGATGAGTCCATCTGTTCCCTCCACATCTTTGGAAAGAGTCTAAGTGTGTCTAGACATTCAAGTTaGGAATGTTTTGGCCCATGT | + |
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Preference number: 2 (lower is better) Translates to: IIDESICSLHIFGKSLSVSRHSS*ECFGPC Trigger: ACATGGGCCAAAACATTCCCAACTTGAATGTCTAGA...CACACTTAGACTCTTTCCAAAGATGTGGAGGGAACAGATGGACTCATCTATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR GCA 72 bp | AAACTGGCCTCAAACTCCCAGAGATCCAACTGCCTCTaGCTTCCAAGTGCTGGGATTAAGGTGTGTGCAACC | + |
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Preference number: 3 (lower is better) Translates to: KLASNSQRSNCL*LPSAGIKVCAT Trigger: GGTTGCACACACCTTAATCCCAGCACTTGGAAGGCAGAGGCAGTTGGATCTCTGGGAGTTTGAGGCCAGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 72 bp | GTGTGGCTCCCAAGAACACCTTACTGCCTTGACCTTTaGCGTAGACGTAGGTTTGGGCAAGGCAATTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: VWLPRTPYCLDL*RRRRFGQGNSC Trigger: GCAAGAATTGCCTTGCCCAAACCTACGTCTACGCCAAAGGTCAAGGCAGTAAGGTGTTCTTGGGAGCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 72 bp | GACGTAGGTTTGGGCAAGGCAATTCTTGCTGGACACTaGGTTCTTTTGTTCTGTGTCCATTTCACTGAACAG | + |
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Preference number: 3 (lower is better) Translates to: DVGLGKAILAGH*VLLFCVHFTEQ Trigger: CTGTTCAGTGAAATGGACACAGAACAAAAGAACCCAGTGTCCAGCAAGAATTGCCTTGCCCAAACCTACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 72 bp | CTGCCACAAGCAAAGATCTGGATGGGGATAGAACTGTaGTGGTTTCCAACCAAGATCATAGATGAGTCCATC | + |
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Preference number: 3 (lower is better) Translates to: LPQAKIWMGIEL*WFPTKIIDESI Trigger: GATGGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGCTTGTGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR GCA 72 bp | ACCCAAAGTTTCAAATGTGAGCATCAGCTCTCACAATaGCAAGCCACGAAAACCCACATCAAGGACTGTCTT | + |
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Preference number: 3 (lower is better) Translates to: TQSFKCEHQLSQ*QATKTHIKDCL Trigger: AAGACAGTCCTTGATGTGGGTTTTCGTGGCTTGGCATTGTGAGAGCTGATGCTCACATTTGAAACTTTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 72 bp | CCACAAGCAAAGATCTGGATGGGGATAGAACTGTGGTaGTTTCCAACCAAGATCATAGATGAGTCCATCTGT | + |
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Preference number: 3 (lower is better) Translates to: PQAKIWMGIELW*FPTKIIDESIC Trigger: ACAGATGGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGCTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAAGATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATGGACACTGGGTTCTTTaGTTCTGTGTCCATTTCACT | + |
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Preference number: 3 (lower is better) Translates to: AKIWMGIELWWFPTKIIDGHWVL*FCVHFT Trigger: AGTGAAATGGACACAGAACAAAAGAACCCAGTGTCC...ATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR TCA 72 bp | GATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATaGGTCCATCTGTTCCCTCCACATCTTTGGAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: DRTVVVSNQDHR*VHLFPPHLWKE Trigger: CTCTTTCCAAAGATGTGGAGGGAACAGATGGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| 3UTR CCA 72 bp | ACTTTCTTAGTTAACAAAGAATTCAACATCCGAAAGTaGCAAAATCACAATATTCTAGGCAAGGGTAAGACC | + |
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Preference number: 3 (lower is better) Translates to: TFLVNKEFNIRK*QNHNILGKGKT Trigger: GGTCTTACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGATGTTGAATTCTTTGTTAACTAAGAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | GCTGCCACAAGCAAAGATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAATCCGGCCAGCCCTCTaGCGAGAGAAGGCATCCACC | + |
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Preference number: 4 (lower is better) Translates to: AATSKDLDGDRTVVVSNQIRPAL*REKAST Trigger: GGTGGATGCCTTCTCTCGCCAGAGGGCTGGCCGGAT...TTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGCTTGTGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTGGCTCCCAAGAACACCTTACTGCCTTGACCTTTGGCGTAGACGTAGGTTGGTCCCCATGGGTGTaGGGCAGTCTTTGGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: KCGSQEHLTALTFGVDVGWSPWV*GSLWVQ Trigger: CTGTACCCAAAGACTGCCCCACACCCATGGGGACCA...ACCTACGTCTACGCCAAAGGTCAAGGCAGTAAGGTGTTCTTGGGAGCCACACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTGGCTCCCAAGAACACCTTACTGCCTTGACCTTTGGCGTAGACGTAGGTAGGATGTTGGTGCCCTaGGGGGCAGGAATGAACTCC | + |
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Preference number: 4 (lower is better) Translates to: KCGSQEHLTALTFGVDVGRMLVP*GAGMNS Trigger: GGAGTTCATTCCTGCCCCCCAGGGCACCAACATCCT...ACCTACGTCTACGCCAAAGGTCAAGGCAGTAAGGTGTTCTTGGGAGCCACACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTGGCTCCCAAGAACACCTTACTGCCTTGACCTTTGGCGTAGACGTAGGTGTGTGGGGCAGTCTTTaGGTACAGAGGGCAGAATGC | + |
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Preference number: 4 (lower is better) Translates to: KCGSQEHLTALTFGVDVGVWGSL*VQRAEC Trigger: GCATTCTGCCCTCTGTACCCAAAGACTGCCCCACAC...ACCTACGTCTACGCCAAAGGTCAAGGCAGTAAGGTGTTCTTGGGAGCCACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR TCA 90 bp | CCACGAAAACCCACATCAAGGACTGTCTTCATCAGGAACAAAACTCCTCCCTCCGCTCCGGGTCAAACTTaGGCTGCAGGAAATAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PRKPTSRTVFIRNKTPPSAPGQT*AAGNSH Trigger: GTGGCTATTTCCTGCAGCTCAAGTTTGACCCGGAGC...GGAGGGAGGAGTTTTGTTCCTGATGAAGACAGTCCTTGATGTGGGTTTTCGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | ACCCACATCAAGGACTGTCTTCATCAGGAACAAAACTCCTCCCTCCAGAGGCTGATGAGGCGAGTGGTCTaGAAGAGCTGCTCATCATCC | + |
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Preference number: 4 (lower is better) Translates to: THIKDCLHQEQNSSLQRLMRRVV*KSCSSS Trigger: GGATGATGAGCAGCTCTTCCAGACCACTCGCCTCAT...CAGCCTCTGGAGGGAGGAGTTTTGTTCCTGATGAAGACAGTCCTTGATGTGGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR GCA 90 bp | ATCCGAAAGTGGCAAAATCACAATATTCTAGGCAAGGGTAAGACCCAAAGTTTCGGGCACCCCAGGATCTaGGAGCAGGACCGAGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: IRKWQNHNILGKGKTQSFGHPRI*EQDRGC Trigger: ACACCCTCGGTCCTGCTCGCAGATCCTGGGGTGCCC...GAAACTTTGGGTCTTACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | CACGAAAACCCACATCAAGGACTGTCTTCATCAGGAACAAAACTCCTCCCTCCAACTGTTTCTTCCCTTTaGTCCCCATGGGTGTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HENPHQGLSSSGTKLLPPTVSSL*SPWVWG Trigger: GCCCCACACCCATGGGGACCAAAGGGAAGAAACAGT...TGGAGGGAGGAGTTTTGTTCCTGATGAAGACAGTCCTTGATGTGGGTTTTCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | AAGTGTGGCTCCCAAGAACACCTTACTGCCTTGACCTTTGGCGTAGACGTAGGTTCTTGTGAGCCCACTTaGAAGGAGTTGGGCATGAGT | + |
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Preference number: 4 (lower is better) Translates to: KCGSQEHLTALTFGVDVGSCEPT*KELGMS Trigger: ACTCATGCCCAACTCCTTCCAAGTGGGCTCACAAGA...ACCTACGTCTACGCCAAAGGTCAAGGCAGTAAGGTGTTCTTGGGAGCCACACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR TCA 90 bp | CCTAGAACTCACTATATAGGCCAAACTGGCCTCAAACTCCCAGAGATCCAACTGAGAAGGACTCCCAGCTaGTGTAGTCATGCGCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: PRTHYIGQTGLKLPEIQLRRTPS*CSHALS Trigger: ACTCAGCGCATGACTACATCAGCTGGGAGTCCTTCT...CAGTTGGATCTCTGGGAGTTTGAGGCCAGTTTGGCCTATATAGTGAGTTCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | ACCCACATCAAGGACTGTCTTCATCAGGAACAAAACTCCTCCCTCCAGAGGCTGGAGGTCTTGAAGAACTaGTGGGTGAAGTGTTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: THIKDCLHQEQNSSLQRLEVLKN*WVKCCA Trigger: TGCACAACACTTCACCCACCAGTTCTTCAAGACCTC...CAGCCTCTGGAGGGAGGAGTTTTGTTCCTGATGAAGACAGTCCTTGATGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR GCA 90 bp | GGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCATTAACTTTCAAGGGATTTTGGCCCACAGCCATCTaGCTTTCAGGCGGGACACCT | + |
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Preference number: 4 (lower is better) Translates to: GLQILGRKLRTPLTFKGFWPTAI*LSGGTP Trigger: AGGTGTCCCGCCTGAAAGGCAGATGGCTGTGGGCCA...AAATCCCTTGAAAGTTAATGGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | ATCATAGATGAGTCCATCTGTTCCCTCCACATCTTTGGAAAGAGTCTAAGTGTGTGTGTCAGCAGGAAATaGGTGAACGAGGGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IIDESICSLHIFGKSLSVCVSRK*VNEGLG Trigger: GCCCAGCCCCTCGTTCACCCATTTCCTGCTGACACA...CACACTTAGACTCTTTCCAAAGATGTGGAGGGAACAGATGGACTCATCTATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | CCTAGAACTCACTATATAGGCCAAACTGGCCTCAAACTCCCAGAGATCCAACTGTTTCGATATTGGAACTaGGCTCGGAACAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PRTHYIGQTGLKLPEIQLFRYWN*ARNSSS Trigger: GGAGCTGCTGTTCCGAGCCCAGTTCCAATATCGAAA...CAGTTGGATCTCTGGGAGTTTGAGGCCAGTTTGGCCTATATAGTGAGTTCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR TCA 90 bp | GGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCATTAACTTTCAAGGGATTTGATGTAGTCATGCGCTaGGTTGTAGGTCGGAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GLQILGRKLRTPLTFKGFDVVMR*VVGRRA Trigger: AGCCCTCCGACCTACAACTCAGCGCATGACTACATC...AAATCCCTTGAAAGTTAATGGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR TCA 90 bp | ATAGTCAACATTCTGAAGAGGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCGGAAGGAGTTGGGCATaGGTGGATGCCAGTGATAGA | + |
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Preference number: 4 (lower is better) Translates to: IVNILKRPPNSRKKIEDPGRSWA*VDASDR Trigger: TCTATCACTGGCATCCACTCATGCCCAACTCCTTCC...GGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCCTCTTCAGAATGTTGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR TCA 90 bp | ATAGTCAACATTCTGAAGAGGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCTCTCCTTCTCTCCTGTaGGCTCCTGGAAAGAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: IVNILKRPPNSRKKIEDPSPSLL*APGKRC Trigger: ACACCTCTTTCCAGGAGCTCACAGGAGAGAAGGAGA...GGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCCTCTTCAGAATGTTGACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR TCA 90 bp | AGTTTCAAATGTGAGCATCAGCTCTCACAATGCCAAGCCACGAAAACCCACATCGACCAGTTTCTTCAGTaGGGCTGTGTTGACAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SFKCEHQLSQCQATKTHIDQFLQ*GCVDKV Trigger: AACCTTGTCAACACAGCCTCACTGAAGAAACTGGTC...GATGTGGGTTTTCGTGGCTTGGCATTGTGAGAGCTGATGCTCACATTTGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | ATTCCACATTCTAGACATTCAAGTTGGGAATGTTTTGGCCCATGTTATAGATCACAGGGATGGTACAGTTaGGGCCTGAGTAGCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: IPHSRHSSWECFGPCYRSQGWYS*GLSSPC Trigger: GCACGGGCTACTCAGGCCCCAACTGTACCATCCCTG...TGATCTATAACATGGGCCAAAACATTCCCAACTTGAATGTCTAGAATGTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | AACATTCTGAAGAGGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCATTAACAACCCAAACACCTCCTaGCCCACAGCCATCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: NILKRPPNSRKKIEDPINNPNTS*PTAICL Trigger: AAGGCAGATGGCTGTGGGCCAGGAGGTGTTTGGGTT...GTTAATGGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCCTCTTCAGAATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR GCA 90 bp | TCACAATGCCAAGCCACGAAAACCCACATCAAGGACTGTCTTCATCAGGAACAAGTACAGAGGGCAGAATaGGAGTATAGTAGCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: SQCQATKTHIKDCLHQEQVQRAE*EYSSSH Trigger: ATGTGAGCTACTATACTCGCATTCTGCCCTCTGTAC...TTGTTCCTGATGAAGACAGTCCTTGATGTGGGTTTTCGTGGCTTGGCATTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | AACATTCTGAAGAGGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCATTAACTCCAGATCTCAGGGATaGTACAGTTGGGGCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: NILKRPPNSRKKIEDPINSRSQG*YSWGLS Trigger: ACTCAGGCCCCAACTGTACCATCCCTGAGATCTGGA...GTTAATGGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCCTCTTCAGAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR CCA 90 bp | AACATTCTGAAGAGGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCATTAACGGGTTTCCAGTACTCTaGGGAACAGATGGGATTCCC | + |
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Preference number: 4 (lower is better) Translates to: NILKRPPNSRKKIEDPINGFPVL*GTDGIP Trigger: GGGAATCCCATCTGTTCCCCAGAGTACTGGAAACCC...GTTAATGGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCCTCTTCAGAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS-3UTR TCA 90 bp | AACATTCTGAAGAGGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCATTAACGTAGCTGTACTCTTGTaGGCCCACTTGGAAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NILKRPPNSRKKIEDPINVAVLL*AHLEGV Trigger: AACTCCTTCCAAGTGGGCTCACAAGAGTACAGCTAC...GTTAATGGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCCTCTTCAGAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR GCA 90 bp | AACAAAGAATTCAACATCCGAAAGTGGCAAAATCACAATATTCTAGGCAAGGGTGAAGGCATCCACCAGTaGCTCAACCCCATAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKEFNIRKWQNHNILGKGEGIHQ*LNPIVH Trigger: GTGGACTATGGGGTTGAGGCACTGGTGGATGCCTTC...ACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGATGTTGAATTCTTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CCA 90 bp | ATCCGAAAGTGGCAAAATCACAATATTCTAGGCAAGGGTAAGACCCAAAGTTTCTCTCCGTCCAGCACCTaGTACTTAAGTTTCCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IRKWQNHNILGKGKTQSFSPSST*YLSFPS Trigger: GGATGGGAAACTTAAGTACCAGGTGCTGGACGGAGA...GAAACTTTGGGTCTTACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| 3UTR CAA 72 bp | TTGGGCAAGGCAATTCTTGCTGGACACTGGGTTCTTTaGTTCTGTGTCCATTTCACTGAACAGGAAAATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKAILAGHWVL*FCVHFTEQENE Trigger: TTCATTTTCCTGTTCAGTGAAATGGACACAGAACAAAAGAACCCAGTGTCCAGCAAGAATTGCCTTGCCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR TCA 90 bp | AACAAAGAATTCAACATCCGAAAGTGGCAAAATCACAATATTCTAGGCAAGGGTTGTTGGGCCAGAAGCTaGACATCTGGTAACTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NKEFNIRKWQNHNILGKGCWARS*TSGNCF Trigger: GAAACAGTTACCAGATGTTCAGCTTCTGGCCCAACA...ACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGATGTTGAATTCTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR TCA 90 bp | AACAAAGAATTCAACATCCGAAAGTGGCAAAATCACAATATTCTAGGCAAGGGTTTGAAGAGCCGCAGGTaGTACTGTCGTTCCAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: NKEFNIRKWQNHNILGKGLKSRR*YCRSRL Trigger: TAATCTGGAACGACAGTATCACCTGCGGCTCTTCAA...ACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGATGTTGAATTCTTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR GCA 90 bp | ATTCCACATTCTAGACATTCAAGTTGGGAATGTTTTGGCCCATGTTATAGATCAGTGGGTGAAGTGTTGTaGAAAGAAGGCAAACAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPHSRHSSWECFGPCYRSVGEVL*KEGKQD Trigger: ATCCTGTTTGCCTTCTTTGCACAACACTTCACCCAC...TGATCTATAACATGGGCCAAAACATTCCCAACTTGAATGTCTAGAATGTGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CCA 90 bp | AACAAAGAATTCAACATCCGAAAGTGGCAAAATCACAATATTCTAGGCAAGGGTGTCTTGAAGAACTGGTaGGTGAAGTGTTGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NKEFNIRKWQNHNILGKGVLKNW*VKCCAK Trigger: CTTTGCACAACACTTCACCCACCAGTTCTTCAAGAC...ACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGATGTTGAATTCTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | CACCTCCTGGCCCACAGCCATCTGCCTTTCAGGCGGGACACCTGGTaGGTAGCGCATCAACACGGACGCCTGTTCCACGGAAGGTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HLLAHSHLPFRRDTW*VAHQHGRLFHGRWV Trigger: TACCCACCTTCCGTGGAACAGGCGTCCGTGTTGATGCGCTACCCACCAGGTGTCCCGCCTGAAAGGCAGATGGCTGTGGGCCAGGAGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS TCA 90 bp | GACACCCTGGTTCTGGCACGGATAGTAACAACAGGGATTGACTGGTaGGGGCACCCCAGGATCTGCGAGCAGGACCGAGGGTGTCGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: DTLVLARIVTTGIDW*GHPRICEQDRGCRR Trigger: CCGCCGACACCCTCGGTCCTGCTCGCAGATCCTGGGGTGCCCTCACCAGTCAATCCCTGTTGTTACTATCCGTGCCAGAACCAGGGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | AAACACCTCCTGGCCCACAGCCATCTGCCTTTCAGGCGGGACACCTaGTGGGTAGCGCATCAACACGGACGCCTGTTCCACGGAAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KHLLAHSHLPFRRDT*WVAHQHGRLFHGRW Trigger: CCACCTTCCGTGGAACAGGCGTCCGTGTTGATGCGCTACCCACCAGGTGTCCCGCCTGAAAGGCAGATGGCTGTGGGCCAGGAGGTGTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS TCA 90 bp | GGACACAGACACCCTGGTTCTGGCACGGATAGTAACAACAGGGATTaGCTGGTGAGGGCACCCCAGGATCTGCGAGCAGGACCGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GHRHPGSGTDSNNRD*LVRAPQDLRAGPRV Trigger: CACCCTCGGTCCTGCTCGCAGATCCTGGGGTGCCCTCACCAGTCAATCCCTGTTGTTACTATCCGTGCCAGAACCAGGGTGTCTGTGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | CCTTCAGCAGGTCGCACACGCGGTTATGTTCACGAAGCCAGATCGTaGAGAAGAGCATCAGCCCCGGAAGCAACCCAAACACCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PSAGRTRGYVHEARS*RRASAPEATQTPPG Trigger: GCCAGGAGGTGTTTGGGTTGCTTCCGGGGCTGATGCTCTTCTCCACGATCTGGCTTCGTGAACATAACCGCGTGTGCGACCTGCTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS GCA 90 bp | ATGAGGCGAGTGGTCTGGAAGAGCTGCTCATCATCCCACGTGGGATaGTCCTCCTTCAGCAGGTCGCACACGCGGTTATGTTCACGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: MRRVVWKSCSSSHVG*SSFSRSHTRLCSRS Trigger: GCTTCGTGAACATAACCGCGTGTGCGACCTGCTGAAGGAGGAGCATCCCACGTGGGATGATGAGCAGCTCTTCCAGACCACTCGCCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | ACCTGGTGGGTAGCGCATCAACACGGACGCCTGTTCCACGGAAGGTaGGTACACCTCTCCGTCCAGCACCTGGTACTTAAGTTTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TWWVAHQHGRLFHGR*VHLSVQHLVLKFPI Trigger: GATGGGAAACTTAAGTACCAGGTGCTGGACGGAGAGGTGTACCCACCTTCCGTGGAACAGGCGTCCGTGTTGATGCGCTACCCACCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS TCA 90 bp | ATTCCGAAGCCAGGTCCAGATCTCAGGGATGGTACAGTTGGGGCCTaGGTAGCCCGTGCGAGTACAATCACACTGGTAGTTGTCGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPKPGPDLRDGTVGA*VARASTITLVVVEA Trigger: GGCCTCGACAACTACCAGTGTGATTGTACTCGCACGGGCTACTCAGGCCCCAACTGTACCATCCCTGAGATCTGGACCTGGCTTCGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS GCA 90 bp | AGGTCCAGATCTCAGGGATGGTACAGTTGGGGCCTGAGTAGCCCGTaGGAGTACAATCACACTGGTAGTTGTCGAGGCCAAAGCGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: RSRSQGWYSWGLSSP*EYNHTGSCRGQSGH Trigger: GTGTCCGCTTTGGCCTCGACAACTACCAGTGTGATTGTACTCGCACGGGCTACTCAGGCCCCAACTGTACCATCCCTGAGATCTGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | TGGGTGAAGTGTTGTGCAAAGAAGGCAAACAGGATGTTGGTGCCCTaGGGGGCAGGAATGAACTCCCTTCTCAGCAGCAGCTGTTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WVKCCAKKANRMLVP*GAGMNSLLSSSCWA Trigger: GGCCCAACAGCTGCTGCTGAGAAGGGAGTTCATTCCTGCCCCCCAGGGCACCAACATCCTGTTTGCCTTCTTTGCACAACACTTCACCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS TCA 90 bp | GTAGCTCACATTGGAGAAGGACTCCCAGCTGATGTAGTCATGCGCTaGGTTGTAGGTCGGAGGGCTGGGGATAAGGTTGGACCGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: VAHIGEGLPADVVMR*VVGRRAGDKVGPHC Trigger: ACAGTGCGGTCCAACCTTATCCCCAGCCCTCCGACCTACAACTCAGCGCATGACTACATCAGCTGGGAGTCCTTCTCCAATGTGAGCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | GCATTCACAAATTCCCAGAGCCAGTATCCATGTGTCAGCAGGAAATaGGTGAACGAGGGGCTGGGCCGCAGAGAATTCCGAAGCCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFTNSQSQYPCVSRK*VNEGLGRREFRSQV Trigger: GACCTGGCTTCGGAATTCTCTGCGGCCCAGCCCCTCGTTCACCCATTTCCTGCTGACACATGGATACTGGCTCTGGGAATTTGTGAATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS GCA 90 bp | TTGATGGTTTCTCCTATAAGGATGAGGCGAGTGGTCTGGAAGAGCTaGTCATCATCCCACGTGGGATGCTCCTCCTTCAGCAGGTCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LMVSPIRMRRVVWKS*SSSHVGCSSFSRSH Trigger: GTGCGACCTGCTGAAGGAGGAGCATCCCACGTGGGATGATGAGCAGCTCTTCCAGACCACTCGCCTCATCCTTATAGGAGAAACCATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | GCAGAGAATTCCGAAGCCAGGTCCAGATCTCAGGGATGGTACAGTTaGGGCCTGAGTAGCCCGTGCGAGTACAATCACACTGGTAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: AENSEARSRSQGWYS*GLSSPCEYNHTGSC Trigger: ACAACTACCAGTGTGATTGTACTCGCACGGGCTACTCAGGCCCCAACTGTACCATCCCTGAGATCTGGACCTGGCTTCGGAATTCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | GCTGTTGGGCCAGAAGCTGAACATCTGGTAACTGTTTCTTCCCTTTaGTCCCCATGGGTGTGGGGCAGTCTTTGGGTACAGAGGGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: AVGPEAEHLVTVSSL*SPWVWGSLWVQRAE Trigger: TTCTGCCCTCTGTACCCAAAGACTGCCCCACACCCATGGGGACCAAAGGGAAGAAACAGTTACCAGATGTTCAGCTTCTGGCCCAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS TCA 90 bp | GCAGGAATGAACTCCCTTCTCAGCAGCAGCTGTTGGGCCAGAAGCTaGACATCTGGTAACTGTTTCTTCCCTTTGGTCCCCATGGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGMNSLLSSSCWARS*TSGNCFFPLVPMGV Trigger: CACACCCATGGGGACCAAAGGGAAGAAACAGTTACCAGATGTTCAGCTTCTGGCCCAACAGCTGCTGCTGAGAAGGGAGTTCATTCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | ACCCACATCAAGGACTGTCTTCATCAGGAACAAAACTCCTCCCTCCAGAGGCTGAACTGTTTCTTCCCTTaGGTCCCCATGGGTGTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: THIKDCLHQEQNSSLQRLNCFFP*VPMGVG Trigger: CCCCACACCCATGGGGACCAAAGGGAAGAAACAGTT...CAGCCTCTGGAGGGAGGAGTTTTGTTCCTGATGAAGACAGTCCTTGATGTGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | GTAACTGTTTCTTCCCTTTGGTCCCCATGGGTGTGGGGCAGTCTTTaGGTACAGAGGGCAGAATGCGAGTATAGTAGCTCACATTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTVSSLWSPWVWGSL*VQRAECEYSSSHWR Trigger: TCTCCAATGTGAGCTACTATACTCGCATTCTGCCCTCTGTACCCAAAGACTGCCCCACACCCATGGGGACCAAAGGGAAGAAACAGTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | CCTAGAACTCACTATATAGGCCAAACTGGCCTCAAACTCCCAGAGATCCAACTGTCTCAGCAGCAGCTGTaGGGCCAGAAGCTGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: PRTHYIGQTGLKLPEIQLSQQQL*GQKLNI Trigger: GATGTTCAGCTTCTGGCCCAACAGCTGCTGCTGAGA...CAGTTGGATCTCTGGGAGTTTGAGGCCAGTTTGGCCTATATAGTGAGTTCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | GACTGTCTTCATCAGGAACAAAACTCCTCCCTCCAGAGGCTGCTTTCCAGCTCCATCTTTCCAGAGGTCTaGAAGAACTGGTGGGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: DCLHQEQNSSLQRLLSSSIFPEV*KNWWVK Trigger: CTTCACCCACCAGTTCTTCAAGACCTCTGGAAAGAT...GGAGCTGGAAAGCAGCCTCTGGAGGGAGGAGTTTTGTTCCTGATGAAGACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | TTGGTAAAGCCAGGACCCATCTTTCCAGAGGTCTTGAAGAACTGGTaGGTGAAGTGTTGTGCAAAGAAGGCAAACAGGATGTTGGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LVKPGPIFPEVLKNW*VKCCAKKANRMLVP Trigger: GGGCACCAACATCCTGTTTGCCTTCTTTGCACAACACTTCACCCACCAGTTCTTCAAGACCTCTGGAAAGATGGGTCCTGGCTTTACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | GCCTTGGTAAAGCCAGGACCCATCTTTCCAGAGGTCTTGAAGAACTaGTGGGTGAAGTGTTGTGCAAAGAAGGCAAACAGGATGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALVKPGPIFPEVLKN*WVKCCAKKANRMLV Trigger: CACCAACATCCTGTTTGCCTTCTTTGCACAACACTTCACCCACCAGTTCTTCAAGACCTCTGGAAAGATGGGTCCTGGCTTTACCAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 90 bp | ATGACAATTTTGATGGTTTCTCCTATAAGGATGAGGCGAGTGGTCTaGAAGAGCTGCTCATCATCCCACGTGGGATGCTCCTCCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MTILMVSPIRMRRVV*KSCSSSHVGCSSFS Trigger: GCTGAAGGAGGAGCATCCCACGTGGGATGATGAGCAGCTCTTCCAGACCACTCGCCTCATCCTTATAGGAGAAACCATCAAAATTGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | ATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATGAGTCCGGGCAGGTCTTGGTGTaGAGGCAGACCAGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IWMGIELWWFPTKIIDESGQVLV*RQTSFF Trigger: GAAGAAACTGGTCTGCCTCAACACCAAGACCTGCCC...GGACTCATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | ATCCGAAAGTGGCAAAATCACAATATTCTAGGCAAGGGTAAGACCCAAAGTTTCGGGCTGGGGATAAGGTaGGACCGCACTGTGAGTACC | + |
|
Preference number: 5 (lower is better) Translates to: IRKWQNHNILGKGKTQSFGLGIR*DRTVST Trigger: GGTACTCACAGTGCGGTCCAACCTTATCCCCAGCCC...GAAACTTTGGGTCTTACCCTTGCCTAGAATATTGTGATTTTGCCACTTTCGGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | GGCCTCCAAATTCTAGGAAGAAAATTGAGGACCCCATTAACTTTCAAGGGATTTCCGTGGCCTAAGGCCTaGGTAAAGCCAGGACCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GLQILGRKLRTPLTFKGFPWPKA*VKPGPI Trigger: GATGGGTCCTGGCTTTACCAAGGCCTTAGGCCACGG...AAATCCCTTGAAAGTTAATGGGGTCCTCAATTTTCTTCCTAGAATTTGGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | GCAAAGATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATATCTCTCGGGACTCCTaGATGACATCCACAGCCACA | + |
|
Preference number: 5 (lower is better) Translates to: AKIWMGIELWWFPTKIIDISRDS*MTSTAT Trigger: TGTGGCTGTGGATGTCATCAAGGAGTCCCGAGAGAT...ATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | GCAAAGATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAAGATCATAGATTTCAGTGAGGCTGTGTaGACAAGGTTGAAGCCCACG | + |
|
Preference number: 5 (lower is better) Translates to: AKIWMGIELWWFPTKIIDFSEAV*TRLKPT Trigger: CGTGGGCTTCAACCTTGTCAACACAGCCTCACTGAA...ATCTATGATCTTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | AATCACAATATTCTAGGCAAGGGTAAGACCCAAAGTTTCAAATGTGAGCATCAGGCTGTGTTGACAAGGTaGAAGCCCACGTCACCACCG | + |
|
Preference number: 5 (lower is better) Translates to: NHNILGKGKTQSFKCEHQAVLTR*KPTSPP Trigger: CGGTGGTGACGTGGGCTTCAACCTTGTCAACACAGC...CTGATGCTCACATTTGAAACTTTGGGTCTTACCCTTGCCTAGAATATTGTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | GCTGCCACAAGCAAAGATCTGGATGGGGATAGAACTGTGGTGGTTTCCAACCAATCCTCAATGACAATTTaGATGGTTTCTCCTATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: AATSKDLDGDRTVVVSNQSSMTI*MVSPIR Trigger: CCTTATAGGAGAAACCATCAAAATTGTCATTGAGGA...TTGGTTGGAAACCACCACAGTTCTATCCCCATCCAGATCTTTGCTTGTGGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS-3UTR CAA 90 bp | ATTCCACATTCTAGACATTCAAGTTGGGAATGTTTTGGCCCATGTTATAGATCACTGGTGGGTGAAGTGTaGTGCAAAGAAGGCAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: IPHSRHSSWECFGPCYRSLVGEV*CKEGKQ Trigger: CTGTTTGCCTTCTTTGCACAACACTTCACCCACCAG...TGATCTATAACATGGGCCAAAACATTCCCAACTTGAATGTCTAGAATGTGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 72 bp | GCCCACAGCCATCTGCCTTTCAGGCGGGACACCTGGTaGGTAGCGCATCAACACGGACGCCTGTTCCACGGA | + |
|
Preference number: 6 (lower is better) Translates to: AHSHLPFRRDTW*VAHQHGRLFHG Trigger: TCCGTGGAACAGGCGTCCGTGTTGATGCGCTACCCACCAGGTGTCCCGCCTGAAAGGCAGATGGCTGTGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 72 bp | CTGGCCCACAGCCATCTGCCTTTCAGGCGGGACACCTaGTGGGTAGCGCATCAACACGGACGCCTGTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LAHSHLPFRRDT*WVAHQHGRLFH Trigger: GTGGAACAGGCGTCCGTGTTGATGCGCTACCCACCAGGTGTCCCGCCTGAAAGGCAGATGGCTGTGGGCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 72 bp | AAGAGCATCAGCCCCGGAAGCAACCCAAACACCTCCTaGCCCACAGCCATCTGCCTTTCAGGCGGGACACCT | + |
|
Preference number: 6 (lower is better) Translates to: KSISPGSNPNTS*PTAICLSGGTP Trigger: AGGTGTCCCGCCTGAAAGGCAGATGGCTGTGGGCCAGGAGGTGTTTGGGTTGCTTCCGGGGCTGATGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS TCA 72 bp | GTTCTGGCACGGATAGTAACAACAGGGATTGACTGGTaGGGGCACCCCAGGATCTGCGAGCAGGACCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLARIVTTGIDW*GHPRICEQDRG Trigger: CCCTCGGTCCTGCTCGCAGATCCTGGGGTGCCCTCACCAGTCAATCCCTGTTGTTACTATCCGTGCCAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS GCA 72 bp | CCGGCCAGCCCTCTGGCGAGAGAAGGCATCCACCAGTaGCTCAACCCCATAGTCCACCAGCATAGAAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PASPLAREGIHQ*LNPIVHQHRSV Trigger: AACACTTCTATGCTGGTGGACTATGGGGTTGAGGCACTGGTGGATGCCTTCTCTCGCCAGAGGGCTGGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS TCA 72 bp | CACCCTGGTTCTGGCACGGATAGTAACAACAGGGATTaGCTGGTGAGGGCACCCCAGGATCTGCGAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: HPGSGTDSNNRD*LVRAPQDLRAG Trigger: TCCTGCTCGCAGATCCTGGGGTGCCCTCACCAGTCAATCCCTGTTGTTACTATCCGTGCCAGAACCAGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS GCA 72 bp | GTGGTCTGGAAGAGCTGCTCATCATCCCACGTGGGATaGTCCTCCTTCAGCAGGTCGCACACGCGGTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: VVWKSCSSSHVG*SSFSRSHTRLC Trigger: ACATAACCGCGTGTGCGACCTGCTGAAGGAGGAGCATCCCACGTGGGATGATGAGCAGCTCTTCCAGACCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 72 bp | GCAGAGAATTCCGAAGCCAGGTCCAGATCTCAGGGATaGTACAGTTGGGGCCTGAGTAGCCCGTGCGAGTAC | + |
|
Preference number: 6 (lower is better) Translates to: AENSEARSRSQG*YSWGLSSPCEY Trigger: GTACTCGCACGGGCTACTCAGGCCCCAACTGTACCATCCCTGAGATCTGGACCTGGCTTCGGAATTCTCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
||
| CDS CCA 72 bp | GTAGCGCATCAACACGGACGCCTGTTCCACGGAAGGTaGGTACACCTCTCCGTCCAGCACCTGGTACTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: VAHQHGRLFHGR*VHLSVQHLVLK Trigger: CTTAAGTACCAGGTGCTGGACGGAGAGGTGTACCCACCTTCCGTGGAACAGGCGTCCGTGTTGATGCGCTAC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | TCCGAAGCCAGGTCCAGATCTCAGGGATGGTACAGTTaGGGCCTGAGTAGCCCGTGCGAGTACAATCACACT | + |
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Preference number: 6 (lower is better) Translates to: SEARSRSQGWYS*GLSSPCEYNHT Trigger: AGTGTGATTGTACTCGCACGGGCTACTCAGGCCCCAACTGTACCATCCCTGAGATCTGGACCTGGCTTCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | TCCACGGAAGGTGGGTACACCTCTCCGTCCAGCACCTaGTACTTAAGTTTCCCATCCTTGAAGAGCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: STEGGYTSPSST*YLSFPSLKSRR Trigger: CCTGCGGCTCTTCAAGGATGGGAAACTTAAGTACCAGGTGCTGGACGGAGAGGTGTACCCACCTTCCGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS TCA 72 bp | CCAGGTCCAGATCTCAGGGATGGTACAGTTGGGGCCTaGGTAGCCCGTGCGAGTACAATCACACTGGTAGTT | + |
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Preference number: 6 (lower is better) Translates to: PGPDLRDGTVGA*VARASTITLVV Trigger: AACTACCAGTGTGATTGTACTCGCACGGGCTACTCAGGCCCCAACTGTACCATCCCTGAGATCTGGACCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS GCA 72 bp | TCTCAGGGATGGTACAGTTGGGGCCTGAGTAGCCCGTaGGAGTACAATCACACTGGTAGTTGTCGAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: SQGWYSWGLSSP*EYNHTGSCRGQ Trigger: TTGGCCTCGACAACTACCAGTGTGATTGTACTCGCACGGGCTACTCAGGCCCCAACTGTACCATCCCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS GCA 72 bp | TCTCCTATAAGGATGAGGCGAGTGGTCTGGAAGAGCTaGTCATCATCCCACGTGGGATGCTCCTCCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SPIRMRRVVWKS*SSSHVGCSSFS Trigger: GCTGAAGGAGGAGCATCCCACGTGGGATGATGAGCAGCTCTTCCAGACCACTCGCCTCATCCTTATAGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | AATTCCCAGAGCCAGTATCCATGTGTCAGCAGGAAATaGGTGAACGAGGGGCTGGGCCGCAGAGAATTCCGA | + |
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Preference number: 6 (lower is better) Translates to: NSQSQYPCVSRK*VNEGLGRREFR Trigger: TCGGAATTCTCTGCGGCCCAGCCCCTCGTTCACCCATTTCCTGCTGACACATGGATACTGGCTCTGGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | CTGGTAACTGTTTCTTCCCTTTGGTCCCCATGGGTGTaGGGCAGTCTTTGGGTACAGAGGGCAGAATGCGAG | + |
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Preference number: 6 (lower is better) Translates to: LVTVSSLWSPWV*GSLWVQRAECE Trigger: CTCGCATTCTGCCCTCTGTACCCAAAGACTGCCCCACACCCATGGGGACCAAAGGGAAGAAACAGTTACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | TGTTGTGCAAAGAAGGCAAACAGGATGTTGGTGCCCTaGGGGGCAGGAATGAACTCCCTTCTCAGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: CCAKKANRMLVP*GAGMNSLLSSS Trigger: GCTGCTGCTGAGAAGGGAGTTCATTCCTGCCCCCCAGGGCACCAACATCCTGTTTGCCTTCTTTGCACAACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS TCA 72 bp | ATTGGAGAAGGACTCCCAGCTGATGTAGTCATGCGCTaGGTTGTAGGTCGGAGGGCTGGGGATAAGGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: IGEGLPADVVMR*VVGRRAGDKVG Trigger: TCCAACCTTATCCCCAGCCCTCCGACCTACAACTCAGCGCATGACTACATCAGCTGGGAGTCCTTCTCCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CAA 90 bp | GTGTTGAGGCAGACCAGTTTCTTCAGTGAGGCTGTGTTGACAAGGTaGAAGCCCACGTCACCACCGAACGTGCTGGGTTTCCAGTACTCT | + |
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Preference number: 6 (lower is better) Translates to: VLRQTSFFSEAVLTR*KPTSPPNVLGFQYS Trigger: AGAGTACTGGAAACCCAGCACGTTCGGTGGTGACGTGGGCTTCAACCTTGTCAACACAGCCTCACTGAAGAAACTGGTCTGCCTCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS TCA 72 bp | GAGTATAGTAGCTCACATTGGAGAAGGACTCCCAGCTaGTGTAGTCATGCGCTGAGTTGTAGGTCGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: EYSSSHWRRTPS*CSHALSCRSEG Trigger: GCCCTCCGACCTACAACTCAGCGCATGACTACATCAGCTGGGAGTCCTTCTCCAATGTGAGCTACTATACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS GCA 72 bp | TCCAGAGGTCTTGAAGAACTGGTGGGTGAAGTGTTGTaGAAAGAAGGCAAACAGGATGTTGGTGCCCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SRGLEELVGEVL*KEGKQDVGALG Trigger: CCCCAGGGCACCAACATCCTGTTTGCCTTCTTTGCACAACACTTCACCCACCAGTTCTTCAAGACCTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | CCAGAAGCTGAACATCTGGTAACTGTTTCTTCCCTTTaGTCCCCATGGGTGTGGGGCAGTCTTTGGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: PEAEHLVTVSSL*SPWVWGSLWVQ Trigger: CTGTACCCAAAGACTGCCCCACACCCATGGGGACCAAAGGGAAGAAACAGTTACCAGATGTTCAGCTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | TTGATGGTTTCTCCTATAAGGATGAGGCGAGTGGTCTaGAAGAGCTGCTCATCATCCCACGTGGGATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LMVSPIRMRRVV*KSCSSSHVGCS Trigger: GGAGCATCCCACGTGGGATGATGAGCAGCTCTTCCAGACCACTCGCCTCATCCTTATAGGAGAAACCATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CAA 90 bp | TGGCCTAAGGCCTTGGTAAAGCCAGGACCCATCTTTCCAGAGGTCTaGAAGAACTGGTGGGTGAAGTGTTGTGCAAAGAAGGCAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: WPKALVKPGPIFPEV*KNWWVKCCAKKANR Trigger: CCTGTTTGCCTTCTTTGCACAACACTTCACCCACCAGTTCTTCAAGACCTCTGGAAAGATGGGTCCTGGCTTTACCAAGGCCTTAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CAA 90 bp | CCAGTGATAGAGATGGTTAAATTCCATGGCGATGCGGTTTCGATATaGGAACTGGGCTCGGAACAGCAGCTCCGGGTCAAACTTGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PVIEMVKFHGDAVSI*ELGSEQQLRVKLEL Trigger: CAGCTCAAGTTTGACCCGGAGCTGCTGTTCCGAGCCCAGTTCCAATATCGAAACCGCATCGCCATGGAATTTAACCATCTCTATCACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | TTAAATTCCATGGCGATGCGGTTTCGATATTGGAACTaGGCTCGGAACAGCAGCTCCGGGTCAAACTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: LNSMAMRFRYWN*ARNSSSGSNLS Trigger: GCTCAAGTTTGACCCGGAGCTGCTGTTCCGAGCCCAGTTCCAATATCGAAACCGCATCGCCATGGAATTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | AGATGGTTAAATTCCATGGCGATGCGGTTTCGATATTaGAACTGGGCTCGGAACAGCAGCTCCGGGTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: RWLNSMAMRFRY*NWARNSSSGSN Trigger: GTTTGACCCGGAGCTGCTGTTCCGAGCCCAGTTCCAATATCGAAACCGCATCGCCATGGAATTTAACCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CAA 72 bp | GAGATGGTTAAATTCCATGGCGATGCGGTTTCGATATaGGAACTGGGCTCGGAACAGCAGCTCCGGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: EMVKFHGDAVSI*ELGSEQQLRVK Trigger: TTTGACCCGGAGCTGCTGTTCCGAGCCCAGTTCCAATATCGAAACCGCATCGCCATGGAATTTAACCATCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CCA 72 bp | CCAGGACCCATCTTTCCAGAGGTCTTGAAGAACTGGTaGGTGAAGTGTTGTGCAAAGAAGGCAAACAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PGPIFPEVLKNW*VKCCAKKANRM Trigger: CATCCTGTTTGCCTTCTTTGCACAACACTTCACCCACCAGTTCTTCAAGACCTCTGGAAAGATGGGTCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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| CDS CAA 72 bp | CCACTCAAGTGCTGCACATACTCCTCAATGACAATTTaGATGGTTTCTCCTATAAGGATGAGGCGAGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: PLKCCTYSSMTI*MVSPIRMRRVV Trigger: GACCACTCGCCTCATCCTTATAGGAGAAACCATCAAAATTGTCATTGAGGAGTATGTGCAGCACTTGAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000062069.6 |
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