Pregenerated sensors for PTGR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028378Ensembl transcript IDs: ENSMUST00000030069.7
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCCTGTGACAGTGGAGGAGGCTAAGACCCCTGTGGCAGGTGACTaGACCCAGGAAATGCTACCTCCCACAGTGGGCTTAGCCATCCTC | + |
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Preference number: 1 (lower is better) Translates to: WPVTVEEAKTPVAGD*TQEMLPPTVGLAIL Trigger: GAGGATGGCTAAGCCCACTGTGGGAGGTAGCATTTCCTGGGTGCAGTCACCTGCCACAGGGGTCTTAGCCTCCTCCACTGTCACAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR TCA 90 bp | AACAGACACCAAAGGCAGTATTTGTCACGGTCACCCAGGAGGAGCTaGGGTAGGCAGAAACATGCCTGCTCATTGGTTGTCATGATTTCA | + |
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Preference number: 1 (lower is better) Translates to: NRHQRQYLSRSPRRS*GRQKHACSLVVMIS Trigger: TGAAATCATGACAACCAATGAGCAGGCATGTTTCTGCCTACCTCAGCTCCTCCTGGGTGACCGTGACAAATACTGCCTTTGGTGTCTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR CCA 90 bp | CTAGCTGGCAGACCGTCCTCCACCGTGGTTTCTGCTGTATGTCCTTaGTTACTGAGTTCCCAGGTTAGAGAAAATGTTAACAGAATACAA | + |
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Preference number: 1 (lower is better) Translates to: LAGRPSSTVVSAVCP*LLSSQVRENVNRIQ Trigger: TTGTATTCTGTTAACATTTTCTCTAACCTGGGAACTCAGTAACCAAGGACATACAGCAGAAACCACGGTGGAGGACGGTCTGCCAGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR TCA 90 bp | TCCTTCAAGTTCCTGCCCTCATTTCTCTTGGTGACACCTGTGACCTaGAAGTGTAAGTCAAGAAAACCCTTTCCTCCTCTAAATTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: SFKFLPSFLLVTPVT*KCKSRKPFPPLNCF Trigger: AAAGCAATTTAGAGGAGGAAAGGGTTTTCTTGACTTACACTTTCAGGTCACAGGTGTCACCAAGAGAAATGAGGGCAGGAACTTGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR TCA 90 bp | GGTACCAGTGTACAGAACAGTTTGTCTCTTCCCCTAACACTCCTCAGTCCCAGCGACCCCTGTGGCAGGTaGCTGCACCCAGGAAATGCT | + |
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Preference number: 2 (lower is better) Translates to: GTSVQNSLSLPLTLLSPSDPCGR*LHPGNA Trigger: AGCATTTCCTGGGTGCAGTCACCTGCCACAGGGGTC...GCTGGGACTGAGGAGTGTTAGGGGAAGAGACAAACTGTTCTGTACACTGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR TCA 90 bp | GGTACCAGTGTACAGAACAGTTTGTCTCTTCCCCTAACACTCCTCAGTCCCAGCTCACCCAGGAGGAGCTaGGGTAGGCAGAAACATGCC | + |
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Preference number: 2 (lower is better) Translates to: GTSVQNSLSLPLTLLSPSSPRRS*GRQKHA Trigger: GGCATGTTTCTGCCTACCTCAGCTCCTCCTGGGTGA...GCTGGGACTGAGGAGTGTTAGGGGAAGAGACAAACTGTTCTGTACACTGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR GCA 90 bp | TGCACACTTTTAATGCTAGCACGTGGAAGGCAGAGGCAGTCAGATCTCTGTGAATACACAGCACACCAGTaGGGGCTGGCCCTGAGAACT | + |
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Preference number: 2 (lower is better) Translates to: CTLLMLARGRQRQSDLCEYTAHQ*GLALRT Trigger: AGTTCTCAGGGCCAGCCCGCACTGGTGTGCTGTGTA...TTCACAGAGATCTGACTGCCTCTGCCTTCCACGTGCTAGCATTAAAAGTGTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR TCA 90 bp | CTACCTCCCACAGTGGGCTTAGCCATCCTCATAGAGTGGGTTACCATTTCCTCTGTGACACCTGTGACCTaGAAGTGTAAGTCAAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: LPPTVGLAILIEWVTISSVTPVT*KCKSRK Trigger: TTTTCTTGACTTACACTTTCAGGTCACAGGTGTCAC...AGAGGAAATGGTAACCCACTCTATGAGGATGGCTAAGCCCACTGTGGGAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAGCTGAACACCAGCCTAGGCAGAAACATGCCTaGTCATTGGTTGTCATGATT | + |
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Preference number: 2 (lower is better) Translates to: EWVTISSMYMRTLAEHQPRQKHA*SLVVMI Trigger: AATCATGACAACCAATGAGCAGGCATGTTTCTGCCT...AGGCTGGTGTTCAGCTAATGTTCTCATATACATAGAGGAAATGGTAACCCACTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAGCTGAACACCAGCCTGCTCATTGGTTGTCATaGTTTCATTCTCTATCACAG | + |
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Preference number: 2 (lower is better) Translates to: EWVTISSMYMRTLAEHQPAHWLS*FHSLSQ Trigger: CTGTGATAGAGAATGAAATCATGACAACCAATGAGC...AGGCTGGTGTTCAGCTAATGTTCTCATATACATAGAGGAAATGGTAACCCACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR CCA 90 bp | CTAGTATCTATAAACAGTTGGAAGAGAAATCTTTTGCCTTCACATTACACCAAGTCTGCTGTATGTCCTTaGTTACTGAGTTCCCAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LVSINSWKRNLLPSHYTKSAVCP*LLSSQV Trigger: AACCTGGGAACTCAGTAACCAAGGACATACAGCAGA...CTTGGTGTAATGTGAAGGCAAAAGATTTCTCTTCCAACTGTTTATAGATACTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR GCA 72 bp | ACAGTGGAGGAGGCTAAGACCCCTGTGGCAGGTGACTaGACCCAGGAAATGCTACCTCCCACAGTGGGCTTA | + |
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Preference number: 3 (lower is better) Translates to: TVEEAKTPVAGD*TQEMLPPTVGL Trigger: TAAGCCCACTGTGGGAGGTAGCATTTCCTGGGTGCAGTCACCTGCCACAGGGGTCTTAGCCTCCTCCACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR CCA 72 bp | AGAACATTAGCTGAACACCAGCCTGCACGAGCTAGCTaGCAGACCGTCCTCCACCGTGGTTTCTGCTGTATG | + |
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Preference number: 3 (lower is better) Translates to: RTLAEHQPARAS*QTVLHRGFCCM Trigger: CATACAGCAGAAACCACGGTGGAGGACGGTCTGCCAGCTAGCTCGTGCAGGCTGGTGTTCAGCTAATGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR TCA 72 bp | TCAGTCCCAGCTGTGGTAAGTGACAGATTCCTCCCTTaGTCTGTTAGCGTCACTACACAGCACACCAGTGCG | + |
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Preference number: 3 (lower is better) Translates to: SVPAVVSDRFLP*SVSVTTQHTSA Trigger: CGCACTGGTGTGCTGTGTAGTGACGCTAACAGATCAAGGGAGGAATCTGTCACTTACCACAGCTGGGACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR CAA 90 bp | AATGTTCAGGACTCAGAAGGTACCAGTGTACAGAACAGTTTGTCTCTTCCCCTACACCAAAGGCAGTATTaGTCACGGTCACCCAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: NVQDSEGTSVQNSLSLPLHQRQY*SRSPRR Trigger: CCTCCTGGGTGACCGTGACAAATACTGCCTTTGGTG...TAGGGGAAGAGACAAACTGTTCTGTACACTGGTACCTTCTGAGTCCTGAACATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR CCA 72 bp | CTACCTCCCACAGTGGGCTTAGCCATCCTCATAGAGTaGGTTACCATTTCCTCTATGTATATGAGAACATTA | + |
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Preference number: 3 (lower is better) Translates to: LPPTVGLAILIE*VTISSMYMRTL Trigger: TAATGTTCTCATATACATAGAGGAAATGGTAACCCACTCTATGAGGATGGCTAAGCCCACTGTGGGAGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR-3UTR CAA 90 bp | GAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAGCTGAACACCAGCCTAAACATGCCTGCTCATaGGTTGTCATGATTTCATTC | + |
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Preference number: 3 (lower is better) Translates to: EWVTISSMYMRTLAEHQPKHACS*VVMISF Trigger: GAATGAAATCATGACAACCAATGAGCAGGCATGTTT...AGGCTGGTGTTCAGCTAATGTTCTCATATACATAGAGGAAATGGTAACCCACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR TCA 90 bp | CATCGGTCGGGCTGGCCTGTGACAGTGGAGGAGGCTAAGACCCCTGTGGCAGGTGGCCAAAGTAGGCAGTaGGGCCTGGCATGCCAACTG | + |
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Preference number: 4 (lower is better) Translates to: HRSGWPVTVEEAKTPVAGGQSRQ*GLACQL Trigger: CAGTTGGCATGCCAGGCCTCACTGCCTACTTTGGCC...ACCTGCCACAGGGGTCTTAGCCTCCTCCACTGTCACAGGCCAGCCCGACCGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | CATCGGTCGGGCTGGCCTGTGACAGTGGAGGAGGCTAAGACCCCTGTGGCAGGTGTAGGCAGTGAGGCCTaGCATGCCAACTGTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: HRSGWPVTVEEAKTPVAGVGSEA*HANCPQ Trigger: CTGGGGACAGTTGGCATGCCAGGCCTCACTGCCTAC...ACCTGCCACAGGGGTCTTAGCCTCCTCCACTGTCACAGGCCAGCCCGACCGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR GCA 90 bp | CATCGGTCGGGCTGGCCTGTGACAGTGGAGGAGGCTAAGACCCCTGTGGCAGGTCACTGCTCCTGCTGCTaGGCTGACCATCACGGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HRSGWPVTVEEAKTPVAGHCSCC*ADHHGF Trigger: GAAACCGTGATGGTCAGCGCAGCAGCAGGAGCAGTG...ACCTGCCACAGGGGTCTTAGCCTCCTCCACTGTCACAGGCCAGCCCGACCGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR GCA 90 bp | CATCGGTCGGGCTGGCCTGTGACAGTGGAGGAGGCTAAGACCCCTGTGGCAGGTGGGAAGCCTTCGAAGTaGTTCTTCAGGGTCCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: HRSGWPVTVEEAKTPVAGGKPSK*FFRVQL Trigger: GAGCTGGACCCTGAAGAAGCACTTCGAAGGCTTCCC...ACCTGCCACAGGGGTCTTAGCCTCCTCCACTGTCACAGGCCAGCCCGACCGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | CATCGGTCGGGCTGGCCTGTGACAGTGGAGGAGGCTAAGACCCCTGTGGCAGGTAGATGGCACCACAGATaGCAATCCTTCCAAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: HRSGWPVTVEEAKTPVAGRWHHR*QSFQMS Trigger: AGACATTTGGAAGGATTGCCATCTGTGGTGCCATCT...ACCTGCCACAGGGGTCTTAGCCTCCTCCACTGTCACAGGCCAGCCCGACCGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR GCA 90 bp | GGTACCAGTGTACAGAACAGTTTGTCTCTTCCCCTAACACTCCTCAGTCCCAGCCACAACAGAGCCCACTaGTCCTGCTGCTGCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: GTSVQNSLSLPLTLLSPSHNRAH*SCCCAD Trigger: GTCAGCGCAGCAGCAGGAGCAGTGGGCTCTGTTGTG...GCTGGGACTGAGGAGTGTTAGGGGAAGAGACAAACTGTTCTGTACACTGGTACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR TCA 90 bp | GAGCTAGCTGGCAGACCGTCCTCCACCGTGGTTTCTGCTGTATGTCCTTGGTTATCAGTGACGTATTCATaGCACTGGACTTTACCCTCT | + |
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Preference number: 4 (lower is better) Translates to: ELAGRPSSTVVSAVCPWLSVTYS*HWTLPS Trigger: AGAGGGTAAAGTCCAGTGTCATGAATACGTCACTGA...TAACCAAGGACATACAGCAGAAACCACGGTGGAGGACGGTCTGCCAGCTAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | GTTCCCAGGTTAGAGAAAATGTTAACAGAATACAAAGCAGGCCTTCCTTCAAGTTCTGGGGCTGGGCCCTaGGGACATGGTCCAGTACGG | + |
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Preference number: 4 (lower is better) Translates to: VPRLEKMLTEYKAGLPSSSGAGP*GHGPVR Trigger: CCGTACTGGACCATGTCCCCAGGGCCCAGCCCCAGA...ACTTGAAGGAAGGCCTGCTTTGTATTCTGTTAACATTTTCTCTAACCTGGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | CCCCTAGTATCTATAAACAGTTGGAAGAGAAATCTTTTGCCTTCACATTACACCAACCACCTCTGGGGCTaGGCCCTGGGGACATGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PLVSINSWKRNLLPSHYTNHLWG*ALGTWS Trigger: GGACCATGTCCCCAGGGCCCAGCCCCAGAGGTGGTT...GGTGTAATGTGAAGGCAAAAGATTTCTCTTCCAACTGTTTATAGATACTAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR CAA 72 bp | GTTCAGGACTCAGAAGGTACCAGTGTACAGAACAGTTaGTCTCTTCCCCTAACACTCCTCAGTCCCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VQDSEGTSVQNS*SLPLTLLSPSC Trigger: ACAGCTGGGACTGAGGAGTGTTAGGGGAAGAGACAAACTGTTCTGTACACTGGTACCTTCTGAGTCCTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR TCA 90 bp | GTTCCCAGGTTAGAGAAAATGTTAACAGAATACAAAGCAGGCCTTCCTTCAAGTCTCCTGCTGCTGCGCTaGCCATCACGGTTTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VPRLEKMLTEYKAGLPSSLLLLR*PSRFLH Trigger: GTGGAGAAACCGTGATGGTCAGCGCAGCAGCAGGAG...ACTTGAAGGAAGGCCTGCTTTGTATTCTGTTAACATTTTCTCTAACCTGGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR TCA 90 bp | ACCGTCCTCCACCGTGGTTTCTGCTGTATGTCCTTGGTTACTGAGTTCCCAGGTGAGTATAACAGCGTTTaGAAACTCTCCACCTACATT | + |
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Preference number: 4 (lower is better) Translates to: TVLHRGFCCMSLVTEFPGEYNSV*KLSTYI Trigger: AATGTAGGTGGAGAGTTTTCAAACGCTGTTATACTC...ACCTGGGAACTCAGTAACCAAGGACATACAGCAGAAACCACGGTGGAGGACGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | AGGTTAGAGAAAATGTTAACAGAATACAAAGCAGGCCTTCCTTCAAGTTCCTGCATAGATAACCACCTCTaGGGCTGGGCCCTGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: RLEKMLTEYKAGLPSSSCIDNHL*GWALGT Trigger: TGTCCCCAGGGCCCAGCCCCAGAGGTGGTTATCTAT...GCAGGAACTTGAAGGAAGGCCTGCTTTGTATTCTGTTAACATTTTCTCTAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | GAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAGCTGAACACCAGCCTTACTTTCCACGACTCTaGCCACTTGCTCGCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: EWVTISSMYMRTLAEHQPYFPRL*PLARPS Trigger: TGATGGGCGAGCAAGTGGCCAGAGTCGTGGAAAGTA...AGGCTGGTGTTCAGCTAATGTTCTCATATACATAGAGGAAATGGTAACCCACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR GCA 90 bp | GAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAGCTGAACACCAGCCTTTGAGCTTAGCTATCTaGCCCACAACAGAGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: EWVTISSMYMRTLAEHQPLSLAI*PTTEPT Trigger: AGTGGGCTCTGTTGTGGGGCAGATAGCTAAGCTCAA...AGGCTGGTGTTCAGCTAATGTTCTCATATACATAGAGGAAATGGTAACCCACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR GCA 90 bp | GTTCCCAGGTTAGAGAAAATGTTAACAGAATACAAAGCAGGCCTTCCTTCAAGTCTTTTCATCAGACCCTaGTGTACCAACAACTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: VPRLEKMLTEYKAGLPSSLFIRP*CTNNFA Trigger: TGCAAAGTTGTTGGTACAGCAGGGTCTGATGAAAAG...ACTTGAAGGAAGGCCTGCTTTGTATTCTGTTAACATTTTCTCTAACCTGGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | GAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAGCTGAACACCAGCCTCCAAATGTCTTCATCTaGAGTATAACAGCGTTTGAA | + |
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Preference number: 4 (lower is better) Translates to: EWVTISSMYMRTLAEHQPPNVFI*SITAFE Trigger: TTCAAACGCTGTTATACTCCAGATGAAGACATTTGG...AGGCTGGTGTTCAGCTAATGTTCTCATATACATAGAGGAAATGGTAACCCACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR GCA 90 bp | TTAGCCATCCTCATAGAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTACATTCCCATAAATGCTaGGGGCATTTTCTCAAATCC | + |
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Preference number: 4 (lower is better) Translates to: LAILIEWVTISSMYMRTLHSHKC*GHFLKS Trigger: GGATTTGAGAAAATGCCCGCAGCATTTATGGGAATG...TAATGTTCTCATATACATAGAGGAAATGGTAACCCACTCTATGAGGATGGCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| 3UTR CAA 72 bp | CCCCTAGTATCTATAAACAGTTGGAAGAGAAATCTTTaGCCTTCACATTACACCAAGTTCACTGTCTTAGTT | + |
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Preference number: 4 (lower is better) Translates to: PLVSINSWKRNL*PSHYTKFTVLV Trigger: AACTAAGACAGTGAACTTGGTGTAATGTGAAGGCAAAAGATTTCTCTTCCAACTGTTTATAGATACTAGGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CCA 90 bp | CTAGTATCTATAAACAGTTGGAAGAGAAATCTTTTGCCTTCACATTACACCAAGCATTCCCATCAGAAATaGAATGTGATGTCCAACCTA | + |
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Preference number: 4 (lower is better) Translates to: LVSINSWKRNLLPSHYTKHSHQK*NVMSNL Trigger: TAGGTTGGACATCACATTCCATTTCTGATGGGAATG...CTTGGTGTAATGTGAAGGCAAAAGATTTCTCTTCCAACTGTTTATAGATACTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CCA 90 bp | CACGATGAACCCCTCCATGCGGAGTTGCTGATAGATAACCACCTCTaGGGCTGGGCCCTGGGGACATGGTCCAGTACGGTTGTATTGAGA | + |
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Preference number: 5 (lower is better) Translates to: HDEPLHAELLIDNHL*GWALGTWSSTVVLR Trigger: TCTCAATACAACCGTACTGGACCATGTCCCCAGGGCCCAGCCCCAGAGGTGGTTATCTATCAGCAACTCCGCATGGAGGGGTTCATCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CAA 90 bp | CTACCTCCCACAGTGGGCTTAGCCATCCTCATAGAGTGGGTTACCATTTCCTCTCACGACTCTGGCCACTaGCTCGCCCATCATCCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LPPTVGLAILIEWVTISSHDSGH*LAHHPV Trigger: GACAGGATGATGGGCGAGCAAGTGGCCAGAGTCGTG...AGAGGAAATGGTAACCCACTCTATGAGGATGGCTAAGCCCACTGTGGGAGGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CAA 90 bp | GAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAGCTGAACACCAGCCTGCTGTACCAACAACTTaGCAGCCCTTGAGCTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: EWVTISSMYMRTLAEHQPAVPTT*QPLSLA Trigger: AGCTAAGCTCAAGGGCTGCAAAGTTGTTGGTACAGC...AGGCTGGTGTTCAGCTAATGTTCTCATATACATAGAGGAAATGGTAACCCACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CAA 90 bp | AATGTTCAGGACTCAGAAGGTACCAGTGTACAGAACAGTTTGTCTCTTCCCCTATCCAGTACGGTTGTATaGAGAGATGGCACCACAGAT | + |
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Preference number: 5 (lower is better) Translates to: NVQDSEGTSVQNSLSLPLSSTVV*RDGTTD Trigger: ATCTGTGGTGCCATCTCTCAATACAACCGTACTGGA...TAGGGGAAGAGACAAACTGTTCTGTACACTGGTACCTTCTGAGTCCTGAACATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS-3UTR CAA 90 bp | TTAGCCATCCTCATAGAGTGGGTTACCATTTCCTCTATGTATATGAGAACATTAACAACTTTGCAGCCCTaGAGCTTAGCTATCTGCCCC | + |
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Preference number: 5 (lower is better) Translates to: LAILIEWVTISSMYMRTLTTLQP*SLAICP Trigger: GGGGCAGATAGCTAAGCTCAAGGGCTGCAAAGTTGT...TAATGTTCTCATATACATAGAGGAAATGGTAACCCACTCTATGAGGATGGCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CCA 72 bp | CCCCTCCATGCGGAGTTGCTGATAGATAACCACCTCTaGGGCTGGGCCCTGGGGACATGGTCCAGTACGGTT | + |
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Preference number: 6 (lower is better) Translates to: PLHAELLIDNHL*GWALGTWSSTV Trigger: AACCGTACTGGACCATGTCCCCAGGGCCCAGCCCCAGAGGTGGTTATCTATCAGCAACTCCGCATGGAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CAA 72 bp | TTGCCACCGATTCACGATGAACCCCTCCATGCGGAGTaGCTGATAGATAACCACCTCTGGGGCTGGGCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LPPIHDEPLHAE*LIDNHLWGWAL Trigger: CAGGGCCCAGCCCCAGAGGTGGTTATCTATCAGCAACTCCGCATGGAGGGGTTCATCGTGAATCGGTGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CCA 72 bp | CATGCGGAGTTGCTGATAGATAACCACCTCTGGGGCTaGGCCCTGGGGACATGGTCCAGTACGGTTGTATTG | + |
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Preference number: 6 (lower is better) Translates to: HAELLIDNHLWG*ALGTWSSTVVL Trigger: CAATACAACCGTACTGGACCATGTCCCCAGGGCCCAGCCCCAGAGGTGGTTATCTATCAGCAACTCCGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CCA 72 bp | ATAGATAACCACCTCTGGGGCTGGGCCCTGGGGACATaGTCCAGTACGGTTGTATTGAGAGATGGCACCACA | + |
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Preference number: 6 (lower is better) Translates to: IDNHLWGWALGT*SSTVVLRDGTT Trigger: TGTGGTGCCATCTCTCAATACAACCGTACTGGACCATGTCCCCAGGGCCCAGCCCCAGAGGTGGTTATCTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CAA 72 bp | GGCTGGGCCCTGGGGACATGGTCCAGTACGGTTGTATaGAGAGATGGCACCACAGATGGCAATCCTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GWALGTWSSTVV*RDGTTDGNPSK Trigger: TTTGGAAGGATTGCCATCTGTGGTGCCATCTCTCAATACAACCGTACTGGACCATGTCCCCAGGGCCCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS GCA 72 bp | AAGGCTGAGTTTTTACTTTCCACGACTCTGGCCACTTaGTCGCCCATCATCCTGTCGCCCTCCTTCAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: KAEFLLSTTLAT*SPIILSPSFSF Trigger: AAAACTGAAGGAGGGCGACAGGATGATGGGCGAGCAAGTGGCCAGAGTCGTGGAAAGTAAAAACTCAGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CCA 72 bp | CCTGGGGACATGGTCCAGTACGGTTGTATTGAGAGATaGCACCACAGATGGCAATCCTTCCAAATGTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PGDMVQYGCIER*HHRWQSFQMSS Trigger: TGAAGACATTTGGAAGGATTGCCATCTGTGGTGCCATCTCTCAATACAACCGTACTGGACCATGTCCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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| CDS CCA 72 bp | GCACCACAGATGGCAATCCTTCCAAATGTCTTCATCTaGAGTATAACAGCGTTTGAAAACTCTCCACCTACA | + |
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Preference number: 6 (lower is better) Translates to: APQMAILPNVFI*SITAFENSPPT Trigger: TGTAGGTGGAGAGTTTTCAAACGCTGTTATACTCCAGATGAAGACATTTGGAAGGATTGCCATCTGTGGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030069.7 |
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