Pregenerated sensors for PTGIS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017969Ensembl transcript IDs: ENSMUST00000018113.8, ENSMUST00000088041.11
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCAAGGCCTGGACTACACCAGCTACCAAAGGAGGGGACAGTGCTTaGTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACACC | + |
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Preference number: 1 (lower is better) Translates to: AKAWTTPATKGGDSA*SESQGQGDVNHGHT Trigger: GGTGTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTCCCCTCCTTTGGTAGCTGGTGTAGTCCAGGCCTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAAATCCAACAGACAGCCCGATTTaGAAGCAAGTCTTCACAGCG | + |
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Preference number: 2 (lower is better) Translates to: LFKDLGIRLRVIHTLTNPTDSPI*KQVFTA Trigger: CGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTGT...TGGATTTGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| 3UTR CCA 72 bp | CCACATGGGTCCTCTAAGGACCCATGTCTGCCATGTTaGCCAAGGCCTGGACTACACCAGCTACCAAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: PHGSSKDPCLPC*PRPGLHQLPKE Trigger: CTCCTTTGGTAGCTGGTGTAGTCCAGGCCTTGGCCAACATGGCAGACATGGGTCCTTAGAGGACCCATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | GGGGACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACCCCTGGAGGCCAGCCTaGCTGGGGACAGCAGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GDSACSESQGQGDVNHGHPWRPA*LGTAAS Trigger: GGAAGCTGCTGTCCCCAGCCAGGCTGGCCTCCAGGG...GTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ATCCACATGGGTCCTCTAAGGACCCATGTCTGCCATGTTGGCCAAGGCCTGGACCTCTTCCCCAGGCACTaGTTGTGCCCTGCGCCCCAT | + |
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Preference number: 4 (lower is better) Translates to: IHMGPLRTHVCHVGQGLDLFPRH*LCPAPH Trigger: ATGGGGCGCAGGGCACAACCAGTGCCTGGGGAAGAG...GTCCAGGCCTTGGCCAACATGGCAGACATGGGTCCTTAGAGGACCCATGTGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | ATCCACATGGGTCCTCTAAGGACCCATGTCTGCCATGTTGGCCAAGGCCTGGACACACGATCTTGGGCCTaGCTCTCATGGGTGCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: IHMGPLRTHVCHVGQGLDTRSWA*LSWVRG Trigger: ACCACGCACCCATGAGAGTCAGGCCCAAGATCGTGT...GTCCAGGCCTTGGCCAACATGGCAGACATGGGTCCTTAGAGGACCCATGTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | GACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACACCGCTTCTGTGAGCGCCTaGAGGTCTCTGTGCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: DSACSESQGQGDVNHGHTASVSA*RSLCMS Trigger: GCTCATGCACAGAGACCTGCAGGCGCTCACAGAAGC...GGTGTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | GGGGACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACCACCCAGCAGGACCGTaGGAAGGTTGGTATACATGG | + |
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Preference number: 4 (lower is better) Translates to: GDSACSESQGQGDVNHGHHPAGP*EGWYTW Trigger: CCATGTATACCAACCTTCGCACGGTCCTGCTGGGTG...GTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CATGGGTCCTCTAAGGACCCATGTCTGCCATGTTGGCCAAGGCCTGGACTACACGCACTGGTTGTGCCCTaGGCCCCATGGCATGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: HGSSKDPCLPCWPRPGLHALVVP*APWHVV Trigger: TACAACATGCCATGGGGCGCAGGGCACAACCAGTGC...GTGTAGTCCAGGCCTTGGCCAACATGGCAGACATGGGTCCTTAGAGGACCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | ATCCACATGGGTCCTCTAAGGACCCATGTCTGCCATGTTGGCCAAGGCCTGGACGCCGGAGTGTCTCATTaGGCACACTGTCTAGCACAG | + |
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Preference number: 4 (lower is better) Translates to: IHMGPLRTHVCHVGQGLDAGVSH*AHCLAQ Trigger: CTGTGCTAGACAGTGTGCTCAATGAGACACTCCGGC...GTCCAGGCCTTGGCCAACATGGCAGACATGGGTCCTTAGAGGACCCATGTGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | GACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACACCCCATATTCCCCTGTGTaGCCCAGAGCTGCAACACCA | + |
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Preference number: 4 (lower is better) Translates to: DSACSESQGQGDVNHGHTPYSPV*PRAATP Trigger: TGGTGTTGCAGCTCTGGGCCACACAGGGGAATATGG...GGTGTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | GACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACACCGAGTGTGGTCATCTGTaGAACAGGCTGCTCTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: DSACSESQGQGDVNHGHTECGHL*NRLLCL Trigger: CAAGCAGAGCAGCCTGTTTCACAGATGACCACACTC...GGTGTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | GACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACACCATCTGTGAAACAGGCTaGTCTGCTTGCCAGACCGTG | + |
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Preference number: 4 (lower is better) Translates to: DSACSESQGQGDVNHGHTICETG*SACQTV Trigger: CACGGTCTGGCAAGCAGAGCAGCCTGTTTCACAGAT...GGTGTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | GACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACACCTTGACACTGCATGCATaGTCTTTATCCCCCGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: DSACSESQGQGDVNHGHTLTLHA*SLSPAD Trigger: GTCAGCGGGGGATAAAGACCATGCATGCAGTGTCAA...GGTGTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | GGGGACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACTCTTCTGTGGGAGTGTaGTCATCTGTGAAACAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GDSACSESQGQGDVNHGHSSVGV*SSVKQA Trigger: AGCCTGTTTCACAGATGACCACACTCCCACAGAAGA...GTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ATCCACATGGGTCCTCTAAGGACCCATGTCTGCCATGTTGGCCAAGGCCTGGACCTCTGTGTAGATTTCTaGGTCCTTCTGGGGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: IHMGPLRTHVCHVGQGLDLCVDF*VLLGTQ Trigger: CTGAGTCCCCAGAAGGACCCAGAAATCTACACAGAG...GTCCAGGCCTTGGCCAACATGGCAGACATGGGTCCTTAGAGGACCCATGTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAACCAGAGCCCGGGCCTaGATCTCCTCTGACACCCCC | + |
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Preference number: 4 (lower is better) Translates to: QTARFGSKSSQRDTELLLTRARA*ISSDTP Trigger: GGGGGTGTCAGAGGAGATGCAGGCCCGGGCTCTGGT...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGGAGGCCAGCCTGGCTaGGGACAGCAGCTTCCACAG | + |
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Preference number: 4 (lower is better) Translates to: QTARFGSKSSQRDTELLLGGQPG*GQQLPQ Trigger: CTGTGGAAGCTGCTGTCCCCAGCCAGGCTGGCCTCC...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTACCAAACTCCAAGGCATaGCCCAGCCAGGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: QTARFGSKSSQRDTELLLPNSKA*PSQGML Trigger: CAGCATCCCCTGGCTGGGCCATGCCTTGGAGTTTGG...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTCACTGCCTGCTTCTGTaGAGTCACCCAGCAGGACCG | + |
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Preference number: 4 (lower is better) Translates to: TARFGSKSSQRDTELLLAHCLLL*SHPAGP Trigger: CGGTCCTGCTGGGTGACTCCACAGAAGCAGGCAGTG...AGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTATCTCCTGCCAGCCACTaGCTGCTTCTGTGGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QTARFGSKSSQRDTELLLSPASH*LLLWSH Trigger: GTGACTCCACAGAAGCAGGCAGTGGCTGGCAGGAGA...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | ATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTTTCCTGCGGCCTGCATCTCCTCTaGCACCCCCATCTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: IWKQVFTARYRAFISFSCGLHLL*HPHLLK Trigger: CTTGAGGAGATGGGGGTGTCAGAGGAGATGCAGGCC...GCAGGAAAAGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAAATCCATGTGTGGCCCAGAGCTaGAACACCAGAGCCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LFKDLGIRLRVIHTLTNPCVAQS*NTRARA Trigger: GGCCCGGGCTCTGGTGTTGCAGCTCTGGGCCACACA...TGGATTTGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTTTCCTGCGCGTCGGCTTCATCCTaGCCTTCTCCTCACTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: IWKQVFTARYRAFISFSCASASS*PSPHWG Trigger: ACCCCAGTGAGGAGAAGGCCAGGATGAAGCCGACGC...GCAGGAAAAGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTTTCCTGCGGGCACGTCTTCCTCTaGCTGCATCAGACCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: IWKQVFTARYRAFISFSCGHVFL*LHQTEA Trigger: GGCTTCGGTCTGATGCAGCCAGAGGAAGACGTGCCC...GCAGGAAAAGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | CCATGTCTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAGGAGCCAGAAGGCCGTaGGACCCATATTCCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: PCLFKDLGIRLRVIHTLTGARRP*DPYSPV Trigger: CACAGGGGAATATGGGTCCCACGGCCTTCTGGCTCC...TGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAGACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTGTGCCCTGCGCCCCATaGCATGTTGTAATTCTTCAG | + |
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Preference number: 4 (lower is better) Translates to: TARFGSKSSQRDTELLLAVPCAP*HVVILQ Trigger: CTGAAGAATTACAACATGCCATGGGGCGCAGGGCAC...AGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAAATCCACTGCCAGCCACTGCCTaGTTCTGTGGAGTCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFKDLGIRLRVIHTLTNPLPATA*FCGVTQ Trigger: CTGGGTGACTCCACAGAAGCAGGCAGTGGCTGGCAG...TGGATTTGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTGTGTCGTAAGAGTGTaGGTCCAGGAGAACAGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TARFGSKSSQRDTELLLACVVRV*VQENSD Trigger: GTCACTGTTCTCCTGGACCCACACTCTTACGACACA...AGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | ACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTCTCCTCACTGGGGTTaGAATTTGGAAGCTGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: TARFGSKSSQRDTELLLASPHWG*NLEAAD Trigger: ATCTGCAGCTTCCAAATTTCAACCCCAGTGAGGAGA...AGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | CCATGTCTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAGGGCTTCCGGATTCTTaGGGAGGAAAAGAAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: PCLFKDLGIRLRVIHTLTGLPDS*GGKEGA Trigger: GGCTCCTTCTTTTCCTCCTCAAGAATCCGGAAGCCC...TGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAGACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGTTTTTGACACTGCATaGATGGTCTTTATCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: QTARFGSKSSQRDTELLLVFDTA*MVFIPR Trigger: GCGGGGGATAAAGACCATGCATGCAGTGTCAAAAAC...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTTTCCTGCAGCTGGCGGAAGGTATaGAAAACATCCGCTGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: IWKQVFTARYRAFISFSCSWRKV*KTSAEW Trigger: CCACTCAGCGGATGTTTTCCATACCTTCCGCCAGCT...GCAGGAAAAGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | CTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAAATCCAAGCCTCGAGCCAGTTTaGGGAGCAGCAGATCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LFKDLGIRLRVIHTLTNPSLEPV*GAADPA Trigger: AGCTGGATCTGCTGCTCCCCAAACTGGCTCGAGGCT...TGGATTTGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | CCATGTCTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACATATACATGGCTTCTGTaGGCGCCTGCAGGTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: PCLFKDLGIRLRVIHTLTYTWLL*APAGLC Trigger: ACAGAGACCTGCAGGCGCTCACAGAAGCCATGTATA...TGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAGACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | ATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTTTCCTGCCGAAGCCATATCTGCTaGGGTCAAACTCAGGAACCT | + |
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Preference number: 4 (lower is better) Translates to: IWKQVFTARYRAFISFSCRSHIC*GQTQEP Trigger: AGGTTCCTGAGTTTGACCTCAGCAGATATGGCTTCG...GCAGGAAAAGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTATTGAAATTTGGAAGCTaGAGATCAAAAATCCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: QTARFGSKSSQRDTELLLLKFGS*RSKILS Trigger: GGAGAGGATTTTTGATCTGCAGCTTCCAAATTTCAA...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAACTGGGGTTGAAATTTaGAAGCTGCAGATCAAAAAT | + |
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Preference number: 4 (lower is better) Translates to: QTARFGSKSSQRDTELLLTGVEI*KLQIKN Trigger: ATTTTTGATCTGCAGCTTCCAAATTTCAACCCCAGT...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR TCA 90 bp | CTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAAATCCACAAAAATCCTCTCCATaGGGAAGATGGCATAGGGAT | + |
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Preference number: 4 (lower is better) Translates to: LFKDLGIRLRVIHTLTNPQKSSP*GRWHRD Trigger: ATCCCTATGCCATCTTCCTCATGGAGAGGATTTTTG...TGGATTTGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CCA 90 bp | ATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAGCTTTTCCTGCCTTTTCAGATCCATCTaGGTTCAAGAATCGGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: IWKQVFTARYRAFISFSCLFRSI*VQESVV Trigger: TACAACCGATTCTTGAACCCAGATGGATCTGAAAAG...GCAGGAAAAGCTAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR GCA 90 bp | CCATGTCTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAGTAAATATGTCACCGTaGTTTTCCTTCATCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: PCLFKDLGIRLRVIHTLTVNMSP*FSFILV Trigger: TACCAGGATGAAGGAAAAGCACGGTGACATATTTAC...TGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAGACATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS GCA 90 bp | CAGCATCTCTCCCAAACTCCAAGGCATGGCCCAGCCAGGGGATGCTaGCCAGGTCCAACGGAGGCTCACCAGGTCTCCGCGCGCGCCGGC | + |
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Preference number: 5 (lower is better) Translates to: QHLSQTPRHGPARGC*PGPTEAHQVSARAG Trigger: GCCGGCGCGCGCGGAGACCTGGTGAGCCTCCGTTGGACCTGGGCAGCATCCCCTGGCTGGGCCATGCCTTGGAGTTTGGGAGAGATGCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 90 bp | TGCGTGGTGAGGCCTCCACTCCATATAGGGTCAGGTAGCCGGCGCTaGGCAGGGCGTTGTAGGAGAACTCAAGGAGACCTGTCTCCTGCC | + |
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Preference number: 5 (lower is better) Translates to: CVVRPPLHIGSGSRR*AGRCRRTQGDLSPA Trigger: GGCAGGAGACAGGTCTCCTTGAGTTCTCCTACAACGCCCTGCTCAGCGCCGGCTACCTGACCCTATATGGAGTGGAGGCCTCACCACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 90 bp | TGTGGCCCAGAGCTGCAACACCAGAGCCCGGGCCTGCATCTCCTCTaGCACCCCCATCTCCTCAAGATGTCTCAGATAACTCTCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: CGPELQHQSPGLHLL*HPHLLKMSQITLQP Trigger: TGGCTGGAGAGTTATCTGAGACATCTTGAGGAGATGGGGGTGTCAGAGGAGATGCAGGCCCGGGCTCTGGTGTTGCAGCTCTGGGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 90 bp | AGCAGGACCGTGCGAAGGTTGGTATACATGGCTTCTGTGAGCGCCTaGAGGTCTCTGTGCATGAGCGTCGGCTTCATCCTGGCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: SRTVRRLVYMASVSA*RSLCMSVGFILAFS Trigger: GGAGAAGGCCAGGATGAAGCCGACGCTCATGCACAGAGACCTGCAGGCGCTCACAGAAGCCATGTATACCAACCTTCGCACGGTCCTGCT 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 90 bp | ATCTTCTGTGGGAGTGTGGTCATCTGTGAAACAGGCTGCTCTGCTTaGCAGACCGTGTGCTTCAGCTCTGCACGGACAGCGGCGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IFCGSVVICETGCSA*QTVCFSSARTAARA Trigger: AGCCCTCGCCGCTGTCCGTGCAGAGCTGAAGCACACGGTCTGGCAAGCAGAGCAGCCTGTTTCACAGATGACCACACTCCCACAGAAGAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 90 bp | GAGGAGAAGGCGGTCACCACGTCGAAGAGAGAATTCCCTCCCGTCTaGCATAGGCAAGGCCAGGTCTGCCATGACCTCACGGGTGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: EEKAVTTSKREFPPV*HRQGQVCHDLTGDE Trigger: TTCATCACCCGTGAGGTCATGGCAGACCTGGCCTTGCCTATGGCAGACGGGAGGGAATTCTCTCTTCGACGTGGTGACCGCCTTCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 90 bp | TGGGCACGTCTTCCTCTGGCTGCATCAGACCGAAGCCATATCTGCTaGGGTCAAACTCAGGAACCTCTGTGTCCTCGCTGCCCAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: WARLPLAASDRSHIC*GQTQEPLCPRCPAP Trigger: TGGAGCTGGGCAGCGAGGACACAGAGGTTCCTGAGTTTGACCTCAGCAGATATGGCTTCGGTCTGATGCAGCCAGAGGAAGACGTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS CCA 90 bp | GCTGACAAGGAGCCTCGAGCCAGTTTGGGGAGCAGCAGATCCAGCTaGCGGAAGGTATGGAAAACATCCGCTGAGTGGACACGATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ADKEPRASLGSSRSS*RKVWKTSAEWTRSW Trigger: CCAAGATCGTGTCCACTCAGCGGATGTTTTCCATACCTTCCGCCAGCTGGATCTGCTGCTCCCCAAACTGGCTCGAGGCTCCTTGTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 90 bp | CGGAAGGTATGGAAAACATCCGCTGAGTGGACACGATCTTGGGCCTaGCTCTCATGGGTGCGTGGTGAGGCCTCCACTCCATATAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RKVWKTSAEWTRSWA*LSWVRGEASTPYRV Trigger: GACCCTATATGGAGTGGAGGCCTCACCACGCACCCATGAGAGTCAGGCCCAAGATCGTGTCCACTCAGCGGATGTTTTCCATACCTTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 90 bp | CTGTCTAGAATCTTCTGTGGGAGTGTGGTCATCTGTGAAACAGGCTaGTCTGCTTGCCAGACCGTGTGCTTCAGCTCTGCACGGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSRIFCGSVVICETG*SACQTVCFSSARTA Trigger: CGCTGTCCGTGCAGAGCTGAAGCACACGGTCTGGCAAGCAGAGCAGCCTGTTTCACAGATGACCACACTCCCACAGAAGATTCTAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 90 bp | GGAAGAAGGAAGACCACTTGCCCTTGTTGGCCTGGCCTGGCCTCTTaGTTGAAGCGTTGGACGATGATGATGACGATGACGACGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: GRRKTTCPCWPGLAS*LKRWTMMMTMTTKT Trigger: CGTCTTCGTCGTCATCGTCATCATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGGCAAGTGGTCTTCCTTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS-3UTR CAA 90 bp | ATCCACATGGGTCCTCTAAGGACCCATGTCTGCCATGTTGGCCAAGGCCTGGACAGGACCGTGCGAAGGTaGGTATACATGGCTTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IHMGPLRTHVCHVGQGLDRTVRR*VYMASV Trigger: CACAGAAGCCATGTATACCAACCTTCGCACGGTCCT...GTCCAGGCCTTGGCCAACATGGCAGACATGGGTCCTTAGAGGACCCATGTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS CCA 90 bp | ACCACTTGCCCTTGTTGGCCTGGCCTGGCCTCTTGCTTGAAGCGTTaGACGATGATGATGACGATGACGACGAAGACGATTCCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: TTCPCWPGLASCLKR*TMMMTMTTKTIPPC Trigger: ACATGGAGGAATCGTCTTCGTCGTCATCGTCATCATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGGCAAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS-3UTR CAA 90 bp | GGGGACAGTGCTTGCTCTGAGAGTCAGGGGCAAGGAGATGTGAACCATGGGCACGGGTTCAAGAATCGGTaGTATTTAAACACCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GDSACSESQGQGDVNHGHGFKNR*YLNTSG Trigger: GCCTGAGGTGTTTAAATACAACCGATTCTTGAACCC...GTGCCCATGGTTCACATCTCCTTGCCCCTGACTCTCAGAGCAAGCACTGTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS TCA 90 bp | AACTCAGGAACCTCTGTGTCCTCGCTGCCCAGCTCCAGGTCGAAATaGGTCAGCAGTAGGACGACAAATTGTTTGATGCTGTTGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NSGTSVSSLPSSRSK*VSSRTTNCLMLLMA Trigger: TGCCATCAACAGCATCAAACAATTTGTCGTCCTACTGCTGACTCATTTCGACCTGGAGCTGGGCAGCGAGGACACAGAGGTTCCTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CAA 90 bp | CAGACAGCCCGATTTGGAAGCAAGTCTTCACAGCGAGATACAGAGCTTTTATTAAGGGCTTCCGGATTCTaGAGGAGGAAAAGAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTARFGSKSSQRDTELLLRASGF*RRKRRS Trigger: GCTCCTTCTTTTCCTCCTCAAGAATCCGGAAGCCCT...TAATAAAAGCTCTGTATCTCGCTGTGAAGACTTGCTTCCAAATCGGGCTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS-3UTR CAA 90 bp | CTCTTTAAAGATCTGGGGATAAGACTTAGAGTAATACACACACTGACAAATCCATTCCACAGGCGGTTTTaGACACTGCATGCATGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LFKDLGIRLRVIHTLTNPFHRRF*TLHAWS Trigger: AGACCATGCATGCAGTGTCAAAAACCGCCTGTGGAA...TGGATTTGTCAGTGTGTGTATTACTCTAAGTCTTATCCCCAGATCTTTAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS GCA 72 bp | AGGCTGCTCTGCTTGCCAGACCGTGTGCTTCAGCTCTaGACGGACAGCGGCGAGGGCTTCCGGATTCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLLCLPDRVLQL*TDSGEGFRILE Trigger: CTCAAGAATCCGGAAGCCCTCGCCGCTGTCCGTGCAGAGCTGAAGCACACGGTCTGGCAAGCAGAGCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 72 bp | GCGGTCACCACGTCGAAGAGAGAATTCCCTCCCGTCTaGCATAGGCAAGGCCAGGTCTGCCATGACCTCACG | + |
|
Preference number: 6 (lower is better) Translates to: AVTTSKREFPPV*HRQGQVCHDLT Trigger: CGTGAGGTCATGGCAGACCTGGCCTTGCCTATGGCAGACGGGAGGGAATTCTCTCTTCGACGTGGTGACCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CCA 72 bp | CAGCCTGGCACGGTACCGGATGGGCACGTCTTCCTCTaGCTGCATCAGACCGAAGCCATATCTGCTGAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: QPGTVPDGHVFL*LHQTEAISAEV Trigger: GACCTCAGCAGATATGGCTTCGGTCTGATGCAGCCAGAGGAAGACGTGCCCATCCGGTACCGTGCCAGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS CAA 72 bp | AGCTCTGCACGGACAGCGGCGAGGGCTTCCGGATTCTaGAGGAGGAAAAGAAGGAGCCAGAAGGCCGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSARTAARASGF*RRKRRSQKAVG Trigger: TCCCACGGCCTTCTGGCTCCTTCTTTTCCTCCTCAAGAATCCGGAAGCCCTCGCCGCTGTCCGTGCAGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 72 bp | AGGCCTCCACTCCATATAGGGTCAGGTAGCCGGCGCTaGGCAGGGCGTTGTAGGAGAACTCAAGGAGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPPLHIGSGSRR*AGRCRRTQGDL Trigger: CAGGTCTCCTTGAGTTCTCCTACAACGCCCTGCTCAGCGCCGGCTACCTGACCCTATATGGAGTGGAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 72 bp | GGGAGTGTGGTCATCTGTGAAACAGGCTGCTCTGCTTaGCAGACCGTGTGCTTCAGCTCTGCACGGACAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GSVVICETGCSA*QTVCFSSARTA Trigger: CGCTGTCCGTGCAGAGCTGAAGCACACGGTCTGGCAAGCAGAGCAGCCTGTTTCACAGATGACCACACTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CCA 72 bp | CTTTATCCCCCGCTGACAAGGAGCCTCGAGCCAGTTTaGGGAGCAGCAGATCCAGCTGGCGGAAGGTATGGA | + |
|
Preference number: 6 (lower is better) Translates to: LYPPLTRSLEPV*GAADPAGGRYG Trigger: TCCATACCTTCCGCCAGCTGGATCTGCTGCTCCCCAAACTGGCTCGAGGCTCCTTGTCAGCGGGGGATAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CAA 72 bp | TCTTTATCCCCCGCTGACAAGGAGCCTCGAGCCAGTTaGGGGAGCAGCAGATCCAGCTGGCGGAAGGTATGG | + |
|
Preference number: 6 (lower is better) Translates to: SLSPADKEPRAS*GSSRSSWRKVW Trigger: CCATACCTTCCGCCAGCTGGATCTGCTGCTCCCCAAACTGGCTCGAGGCTCCTTGTCAGCGGGGGATAAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CAA 90 bp | GTGTGCTTCAGCTCTGCACGGACAGCGGCGAGGGCTTCCGGATTCTaGAGGAGGAAAAGAAGGAGCCAGAAGGCCGTGGGACCCATATTC | + |
|
Preference number: 6 (lower is better) Translates to: VCFSSARTAARASGF*RRKRRSQKAVGPIF Trigger: GAATATGGGTCCCACGGCCTTCTGGCTCCTTCTTTTCCTCCTCAAGAATCCGGAAGCCCTCGCCGCTGTCCGTGCAGAGCTGAAGCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 72 bp | TGGAAAACATCCGCTGAGTGGACACGATCTTGGGCCTaGCTCTCATGGGTGCGTGGTGAGGCCTCCACTCCA | + |
|
Preference number: 6 (lower is better) Translates to: WKTSAEWTRSWA*LSWVRGEASTP Trigger: TGGAGTGGAGGCCTCACCACGCACCCATGAGAGTCAGGCCCAAGATCGTGTCCACTCAGCGGATGTTTTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 72 bp | CTGAGTGGACACGATCTTGGGCCTGACTCTCATGGGTaGGTGGTGAGGCCTCCACTCCATATAGGGTCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSGHDLGPDSHG*VVRPPLHIGSG Trigger: ACCTGACCCTATATGGAGTGGAGGCCTCACCACGCACCCATGAGAGTCAGGCCCAAGATCGTGTCCACTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 72 bp | CTGGCACGGTACCGGATGGGCACGTCTTCCTCTGGCTaGATCAGACCGAAGCCATATCTGCTGAGGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LARYRMGTSSSG*IRPKPYLLRSN Trigger: GTTTGACCTCAGCAGATATGGCTTCGGTCTGATGCAGCCAGAGGAAGACGTGCCCATCCGGTACCGTGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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| CDS CCA 72 bp | GAGCCTCGAGCCAGTTTGGGGAGCAGCAGATCCAGCTaGCGGAAGGTATGGAAAACATCCGCTGAGTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: EPRASLGSSRSS*RKVWKTSAEWT Trigger: TGTCCACTCAGCGGATGTTTTCCATACCTTCCGCCAGCTGGATCTGCTGCTCCCCAAACTGGCTCGAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CAA 72 bp | GCTTCTGTGGAGTCACCCAGCAGGACCGTGCGAAGGTaGGTATACATGGCTTCTGTGAGCGCCTGCAGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASVESPSRTVRR*VYMASVSACRS Trigger: AGACCTGCAGGCGCTCACAGAAGCCATGTATACCAACCTTCGCACGGTCCTGCTGGGTGACTCCACAGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 72 bp | GAGCTGCAACACCAGAGCCCGGGCCTGCATCTCCTCTaGCACCCCCATCTCCTCAAGATGTCTCAGATAACT | + |
|
Preference number: 6 (lower is better) Translates to: ELQHQSPGLHLL*HPHLLKMSQIT Trigger: AGTTATCTGAGACATCTTGAGGAGATGGGGGTGTCAGAGGAGATGCAGGCCCGGGCTCTGGTGTTGCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 72 bp | GTATACATGGCTTCTGTGAGCGCCTGCAGGTCTCTGTaGATGAGCGTCGGCTTCATCCTGGCCTTCTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: VYMASVSACRSL*MSVGFILAFSS Trigger: TGAGGAGAAGGCCAGGATGAAGCCGACGCTCATGCACAGAGACCTGCAGGCGCTCACAGAAGCCATGTATAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS GCA 72 bp | GTGCGAAGGTTGGTATACATGGCTTCTGTGAGCGCCTaGAGGTCTCTGTGCATGAGCGTCGGCTTCATCCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRRLVYMASVSA*RSLCMSVGFIL Trigger: CAGGATGAAGCCGACGCTCATGCACAGAGACCTGCAGGCGCTCACAGAAGCCATGTATACCAACCTTCGCAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CCA 72 bp | AGTTTGGGGAGCAGCAGATCCAGCTGGCGGAAGGTATaGAAAACATCCGCTGAGTGGACACGATCTTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGSSRSSWRKV*KTSAEWTRSWA Trigger: GGCCCAAGATCGTGTCCACTCAGCGGATGTTTTCCATACCTTCCGCCAGCTGGATCTGCTGCTCCCCAAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CCA 72 bp | AGCAGCTTCCACAGGCGGTTTTTGACACTGCATGCATaGTCTTTATCCCCCGCTGACAAGGAGCCTCGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SSFHRRFLTLHA*SLSPADKEPRA Trigger: GGCTCGAGGCTCCTTGTCAGCGGGGGATAAAGACCATGCATGCAGTGTCAAAAACCGCCTGTGGAAGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CAA 72 bp | GTGATGAAGGGGGCAGCCGTGAGCCGGAGTGTCTCATaGAGCACACTGTCTAGCACAGGCATGCTGTCTAGA | + |
|
Preference number: 6 (lower is better) Translates to: VMKGAAVSRSVS*STLSSTGMLSR Trigger: TCTAGACAGCATGCCTGTGCTAGACAGTGTGCTCAATGAGACACTCCGGCTCACGGCTGCCCCCTTCATCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS CAA 72 bp | ACCACTTGCCCTTGTTGGCCTGGCCTGGCCTCTTGCTaGAAGCGTTGGACGATGATGATGACGATGACGACG | + |
|
Preference number: 6 (lower is better) Translates to: TTCPCWPGLASC*KRWTMMMTMTT Trigger: CGTCGTCATCGTCATCATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGGCAAGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS CAA 90 bp | GACCACTTGCCCTTGTTGGCCTGGCCTGGCCTCTTGCTTGAAGCGTaGGACGATGATGATGACGATGACGACGAAGACGATTCCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: DHLPLLAWPGLLLEA*DDDDDDDDEDDSSM Trigger: CATGGAGGAATCGTCTTCGTCGTCATCGTCATCATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGGCAAGTGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS GCA 72 bp | AAGACCACTTGCCCTTGTTGGCCTGGCCTGGCCTCTTaGTTGAAGCGTTGGACGATGATGATGACGATGACG | + |
|
Preference number: 6 (lower is better) Translates to: KTTCPCWPGLAS*LKRWTMMMTMT Trigger: CGTCATCGTCATCATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGGCAAGTGGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS CCA 72 bp | GTGTGGAAGAAGGAAGACCACTTGCCCTTGTTGGCCTaGCCTGGCCTCTTGCTTGAAGCGTTGGACGATGAT | + |
|
Preference number: 6 (lower is better) Translates to: VWKKEDHLPLLA*PGLLLEALDDD Trigger: ATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGGCAAGTGGTCTTCCTTCTTCCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS CAA 72 bp | CCCTTGTTGGCCTGGCCTGGCCTCTTGCTTGAAGCGTaGGACGATGATGATGACGATGACGACGAAGACGAT | + |
|
Preference number: 6 (lower is better) Translates to: PLLAWPGLLLEA*DDDDDDDDEDD Trigger: ATCGTCTTCGTCGTCATCGTCATCATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS CAA 90 bp | TGGAAGAAGGAAGACCACTTGCCCTTGTTGGCCTGGCCTGGCCTCTaGCTTGAAGCGTTGGACGATGATGATGACGATGACGACGAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: WKKEDHLPLLAWPGL*LEALDDDDDDDDED Trigger: GTCTTCGTCGTCATCGTCATCATCATCGTCCAACGCTTCAAGCAAGAGGCCAGGCCAGGCCAACAAGGGCAAGTGGTCTTCCTTCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088041.11 |
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| CDS GCA 72 bp | ATCTTCTGTGGGAGTGTGGTCATCTGTGAAACAGGCTaGTCTGCTTGCCAGACCGTGTGCTTCAGCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: IFCGSVVICETG*SACQTVCFSSA Trigger: TGCAGAGCTGAAGCACACGGTCTGGCAAGCAGAGCAGCCTGTTTCACAGATGACCACACTCCCACAGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000018113.8 ENSMUST00000088041.11 |
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| CDS TCA 72 bp | ACCTCTGTGTCCTCGCTGCCCAGCTCCAGGTCGAAATaGGTCAGCAGTAGGACGACAAATTGTTTGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TSVSSLPSSRSK*VSSRTTNCLML Trigger: CAGCATCAAACAATTTGTCGTCCTACTGCTGACTCATTTCGACCTGGAGCTGGGCAGCGAGGACACAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000018113.8 |
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