Pregenerated sensors for PTGIR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043017Ensembl transcript IDs: ENSMUST00000086101.6, ENSMUST00000144408.2
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | CAGGAGCACTGGCTTGCCCTCCCGCATGCAGCCCGGCCCTCCAGCTaGCTCACTTCCCCTCATGCCAGGCAGCTCATTTCCACGCACCCA | + |
Preference number: 1 (lower is better) Translates to: QEHWLALPHAARPSS*LTSPHARQLISTHP Trigger: TGGGTGCGTGGAAATGAGCTGCCTGGCATGAGGGGAAGTGAGTCAGCTGGAGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | GAACCAGGAGAAACATCAGCAGGAGCACTGGCTTGCCCTCCCGCATaGAGCCCGGCCCTCCAGCTGACTCACTTCCCCTCATGCCAGGCA | + |
Preference number: 1 (lower is better) Translates to: EPGETSAGALACPPA*SPALQLTHFPSCQA Trigger: TGCCTGGCATGAGGGGAAGTGAGTCAGCTGGAGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCTGGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | CCTCCCGCATGCAGCCCGGCCCTCCAGCTGACTCACTTCCCCTCATaGCAGGCAGCTCATTTCCACGCACCCAGGATTCTTTGCTTGGAG | + |
Preference number: 1 (lower is better) Translates to: PPACSPALQLTHFPS*QAAHFHAPRILCLE Trigger: CTCCAAGCAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTGGCATGAGGGGAAGTGAGTCAGCTGGAGGGCCGGGCTGCATGCGGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | GCTGAGAAACAGGAACCAGGAGAAACATCAGCAGGAGCACTGGCTTaGCCTCCCGCATGCAGCCCGGCCCTCCAGCTGACTCACTTCCCC | + |
Preference number: 1 (lower is better) Translates to: AEKQEPGETSAGALA*PPACSPALQLTHFP Trigger: GGGGAAGTGAGTCAGCTGGAGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCTGGTTCCTGTTTCTCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | TTCCCCTCATGCCAGGCAGCTCATTTCCACGCACCCAGGATTCTTTaGTTGGAGGCCTGGGACTTTTCTGCGACCCTGATCCGAGGGAGG | + |
Preference number: 1 (lower is better) Translates to: FPSCQAAHFHAPRIL*LEAWDFSATLIRGR Trigger: CCTCCCTCGGATCAGGGTCGCAGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTGGCATGAGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | CAGGCAGCTCATTTCCACGCACCCAGGATTCTTTGCTTGGAGGCCTaGGACTTTTCTGCGACCCTGATCCGAGGGAGGAAGAGTGAGTGC | + |
Preference number: 1 (lower is better) Translates to: QAAHFHAPRILCLEA*DFSATLIRGRKSEC Trigger: GCACTCACTCTTCCTCCCTCGGATCAGGGTCGCAGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | CCAAGCTTGGGCTTTGCCCTCTCTGGGCCCTGGTTCCACTTTCTCTaGAGAGGCTTTGCTAATATGCTGCCGAGCAGATGGAGTGGGAGG | + |
Preference number: 1 (lower is better) Translates to: PSLGFALSGPWFHFL*RGFANMLPSRWSGR Trigger: CCTCCCACTCCATCTGCTCGGCAGCATATTAGCAAAGCCTCTCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | AGGCACAGAGAGGCCGTGAGAAAGTTCTGCTGTGTGGTCCAAGCTTaGGCTTTGCCCTCTCTGGGCCCTGGTTCCACTTTCTCTGGAGAG | + |
Preference number: 1 (lower is better) Translates to: RHREAVRKFCCVVQA*ALPSLGPGSTFSGE Trigger: CTCTCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACAGCAGAACTTTCTCACGGCCTCTCTGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | TGCATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATaGTACATCACCACCATCTCCGCCTTGTCCCTGTGCCCTCCTCCA | + |
Preference number: 1 (lower is better) Translates to: CILGSMPVKSFGASA*YITTISALSLCPPP Trigger: TGGAGGAGGGCACAGGGACAAGGCGGAGATGGTGGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGATGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | GTTCTGCTGTGTGGTCCAAGCTTGGGCTTTGCCCTCTCTGGGCCCTaGTTCCACTTTCTCTGGAGAGGCTTTGCTAATATGCTGCCGAGC | + |
Preference number: 1 (lower is better) Translates to: VLLCGPSLGFALSGP*FHFLWRGFANMLPS Trigger: GCTCGGCAGCATATTAGCAAAGCCTCTCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACAGCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | CAGGCTTGGGACATGCATCCTAGGAAGCATGCCTGTGAAGTCCTTTaGAGCCTCTGCATGCTACATCACCACCATCTCCGCCTTGTCCCT | + |
Preference number: 1 (lower is better) Translates to: QAWDMHPRKHACEVL*SLCMLHHHHLRLVP Trigger: AGGGACAAGGCGGAGATGGTGGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGATGCATGTCCCAAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | CACCATACCGAAGGAGGAGAAGCAGCAGCAGACACCCCCAGACTCTaGGGATCAAATATGTGGTTTCTGCTACCGTCAGTTGAGTCCCTG | + |
Preference number: 1 (lower is better) Translates to: HHTEGGEAAADTPRL*GSNMWFLLPSVESL Trigger: CAGGGACTCAACTGACGGTAGCAGAAACCACATATTTGATCCCCAGAGTCTGGGGGTGTCTGCTGCTGCTTCTCCTCCTTCGGTATGGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR TCA 90 bp | CCCCAGACTCTGGGGATCAAATATGTGGTTTCTGCTACCGTCAGTTaGGTCCCTGATCTTCTGGCTTCTGGTCCTGTGACAGCGGGCTTA | + |
Preference number: 1 (lower is better) Translates to: PQTLGIKYVVSATVS*VPDLLASGPVTAGL Trigger: TAAGCCCGCTGTCACAGGACCAGAAGCCAGAAGATCAGGGACTCAACTGACGGTAGCAGAAACCACATATTTGATCCCCAGAGTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | AGGGCCGAGGCGTTGTGGCACACACCTCCACACCCAGCTTACCTCTaGCTGTTTTCTCTTCTCCCGATTCTCTTTGCTTTTTCTGAGTGT | + |
Preference number: 1 (lower is better) Translates to: RAEALWHTPPHPAYL*LFSLLPILFAFSEC Trigger: ACACTCAGAAAAAGCAAAGAGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCACAACGCCTCGGCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | AGACCATTTCTGTGCCAGGCATGTGTCCAGCAATGTCACCTGCAGTaGAGTGGCCCTCCTTTCTTCTCACTTCCTCTTAGGGGTTCAAGA | + |
Preference number: 1 (lower is better) Translates to: RPFLCQACVQQCHLQ*SGPPFFSLPLRGSR Trigger: TCTTGAACCCCTAAGAGGAAGTGAGAAGAAAGGAGGGCCACTGCACTGCAGGTGACATTGCTGGACACATGCCTGGCACAGAAATGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 90 bp | TTCTCAGACCATTTCTGTGCCAGGCATGTGTCCAGCAATGTCACCTaGAGTGCAGTGGCCCTCCTTTCTTCTCACTTCCTCTTAGGGGTT | + |
Preference number: 1 (lower is better) Translates to: FSDHFCARHVSSNVT*SAVALLSSHFLLGV Trigger: AACCCCTAAGAGGAAGTGAGAAGAAAGGAGGGCCACTGCACTGCAGGTGACATTGCTGGACACATGCCTGGCACAGAAATGGTCTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR TCA 90 bp | TCTGGGGATCAAATATGTGGTTTCTGCTACCGTCAGTTGAGTCCCTaGTCTTCTGGCTTCTGGTCCTGTGACAGCGGGCTTAGGATGACA | + |
Preference number: 1 (lower is better) Translates to: SGDQICGFCYRQLSP*SSGFWSCDSGLRMT Trigger: TGTCATCCTAAGCCCGCTGTCACAGGACCAGAAGCCAGAAGATCAGGGACTCAACTGACGGTAGCAGAAACCACATATTTGATCCCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | CACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTaGGAGAGAGTCCTTTACTCCTCAAGACACCCCTGTCAGATTAGA | + |
Preference number: 1 (lower is better) Translates to: HPLWLPSRSCVKVFF*ERVLYSSRHPCQIR Trigger: TCTAATCTGACAGGGGTGTCTTGAGGAGTAAAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 90 bp | CAGCAACTGGCATCAGATAGTATCTTTCAGTACCTGAGGACTGACTaGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCTGTTGTTGT | + |
Preference number: 1 (lower is better) Translates to: QQLASDSIFQYLRTD*STQTGLFCGFICCC Trigger: ACAACAACAGATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTGAAAGATACTATCTGATGCCAGTTGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | AGGAGAAACATCAGCAGGAGCACTGGCTTGCCCTCCCGCATGCAGCCCGGCCCTATGCCTTGTGTCCCCTaGGGACCTGGGGTGGGCAGC | + |
Preference number: 2 (lower is better) Translates to: RRNISRSTGLPSRMQPGPMPCVP*GPGVGS Trigger: GCTGCCCACCCCAGGTCCCCAGGGGACACAAGGCAT...AGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | AGGAGAAACATCAGCAGGAGCACTGGCTTGCCCTCCCGCATGCAGCCCGGCCCTCCGAGGGAGGAAGAGTaGGTGCCTGCTGACTTCAGG | + |
Preference number: 2 (lower is better) Translates to: RRNISRSTGLPSRMQPGPPREEE*VPADFR Trigger: CCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGG...AGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CTGATCCGAGGGAGGAAGAGTGAGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTCAGGGGCCCCCTCAGTaGAAGAGGAGAGCAGACACT | + |
Preference number: 2 (lower is better) Translates to: LIRGRKSECLLTSGSPGSQGPPQ*KRRADT Trigger: AGTGTCTGCTCTCCTCTTCCACTGAGGGGGCCCCTG...ACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | AGGAGAAACATCAGCAGGAGCACTGGCTTGCCCTCCCGCATGCAGCCCGGCCCTTCCAGCAATGTCACCTaGAGTGCAGTGGCCCTCCTT | + |
Preference number: 2 (lower is better) Translates to: RRNISRSTGLPSRMQPGPSSNVT*SAVALL Trigger: AAGGAGGGCCACTGCACTGCAGGTGACATTGCTGGA...AGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CTGATCCGAGGGAGGAAGAGTGAGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTAGACAGAGAGATGGATaGAGGAGCCCAGGGGCCAGA | + |
Preference number: 2 (lower is better) Translates to: LIRGRKSECLLTSGSPGSRQRDG*RSPGAR Trigger: TCTGGCCCCTGGGCTCCTCCATCCATCTCTCTGTCT...ACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | CTGATCCGAGGGAGGAAGAGTGAGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTTCCGCCTTGTCCCTGTaGCCTCCTCCAAAGTTCACA | + |
Preference number: 2 (lower is better) Translates to: LIRGRKSECLLTSGSPGSSALSL*PPPKFT Trigger: TGTGAACTTTGGAGGAGGGCACAGGGACAAGGCGGA...ACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CTGATCCGAGGGAGGAAGAGTGAGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTATGGGGGCACAGGCTTaGGACATGCATCCTAGGAAG | + |
Preference number: 2 (lower is better) Translates to: LIRGRKSECLLTSGSPGSMGAQA*DMHPRK Trigger: CTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCAT...ACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 90 bp | CCCTCATGCCAGGCAGCTCATTTCCACGCACCCAGGATTCTTTGCTaGGAGGCCTGGGACTTTTCTGCGACCCTGATCCGAGGGAGGAAG | + |
Preference number: 2 (lower is better) Translates to: PSCQAAHFHAPRILC*EAWDFSATLIRGRK Trigger: CTTCCTCCCTCGGATCAGGGTCGCAGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTGGCATGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 90 bp | CTTCCCCTCATGCCAGGCAGCTCATTTCCACGCACCCAGGATTCTTaGCTTGGAGGCCTGGGACTTTTCTGCGACCCTGATCCGAGGGAG | + |
Preference number: 2 (lower is better) Translates to: LPLMPGSSFPRTQDS*LGGLGLFCDPDPRE Trigger: CTCCCTCGGATCAGGGTCGCAGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTGGCATGAGGGGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | AGGAGAAACATCAGCAGGAGCACTGGCTTGCCCTCCCGCATGCAGCCCGGCCCTCTCAGACCATTTCTGTaGCAGGCATGTGTCCAGCAA | + |
Preference number: 2 (lower is better) Translates to: RRNISRSTGLPSRMQPGPLRPFL*QACVQQ Trigger: TTGCTGGACACATGCCTGGCACAGAAATGGTCTGAG...AGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | AGGAGAAACATCAGCAGGAGCACTGGCTTGCCCTCCCGCATGCAGCCCGGCCCTTTCTGCAGAAGTTGCTaGAATGCCTTGTGTCCCCTG | + |
Preference number: 2 (lower is better) Translates to: RRNISRSTGLPSRMQPGPFCRSC*NALCPL Trigger: CAGGGGACACAAGGCATTCCAGCAACTTCTGCAGAA...AGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 90 bp | GAGGCACAGAGAGGCCGTGAGAAAGTTCTGCTGTGTGGTCCAAGCTaGGGCTTTGCCCTCTCTGGGCCCTGGTTCCACTTTCTCTGGAGA | + |
Preference number: 2 (lower is better) Translates to: EAQRGREKVLLCGPS*GFALSGPWFHFLWR Trigger: TCTCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACAGCAGAACTTTCTCACGGCCTCTCTGTGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 90 bp | GCTTTGCCCTCTCTGGGCCCTGGTTCCACTTTCTCTGGAGAGGCTTaGCTAATATGCTGCCGAGCAGATGGAGTGGGAGGACGAATGACC | + |
Preference number: 2 (lower is better) Translates to: ALPSLGPGSTFSGEA*LICCRADGVGGRMT Trigger: GGTCATTCGTCCTCCCACTCCATCTGCTCGGCAGCATATTAGCAAAGCCTCTCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 90 bp | AGAGAGGCCGTGAGAAAGTTCTGCTGTGTGGTCCAAGCTTGGGCTTaGCCCTCTCTGGGCCCTGGTTCCACTTTCTCTGGAGAGGCTTTG | + |
Preference number: 2 (lower is better) Translates to: REAVRKFCCVVQAWA*PSLGPGSTFSGEAL Trigger: CAAAGCCTCTCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACAGCAGAACTTTCTCACGGCCTCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | GTAAGTTGTTCCAGGATGGGGGCACAGGCTTGGGACATGCATCCTAGGAAGCATGGGGCCAGAGCAGCCTaGCCAGGCCCTGGTTATTTT | + |
Preference number: 2 (lower is better) Translates to: VSCSRMGAQAWDMHPRKHGARAA*PGPGYF Trigger: AAAATAACCAGGGCCTGGGCAGGCTGCTCTGGCCCC...ATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTGCAGGAGCACTGGCTTaGCCTCCCGCATGCAGCCCG | + |
Preference number: 2 (lower is better) Translates to: LWLPSRSCVKVFFWERVLAGALA*PPACSP Trigger: CGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGC...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | GTAAGTTGTTCCAGGATGGGGGCACAGGCTTGGGACATGCATCCTAGGAAGCATCAGGGGCCCCCTCAGTaGAAGAGGAGAGCAGACACT | + |
Preference number: 2 (lower is better) Translates to: VSCSRMGAQAWDMHPRKHQGPPQ*KRRADT Trigger: AGTGTCTGCTCTCCTCTTCCACTGAGGGGGCCCCTG...ATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTGGGAGGAAGAGTGAGTaGCTGCTGACTTCAGGGTCC | + |
Preference number: 2 (lower is better) Translates to: WHTPPHPAYLCLFSLLPIGRKSE*LLTSGS Trigger: GGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCC...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTATGCCTTGTGTCCCCTaGGGACCTGGGGTGGGCAGC | + |
Preference number: 2 (lower is better) Translates to: LWLPSRSCVKVFFWERVLMPCVP*GPGVGS Trigger: GCTGCCCACCCCAGGTCCCCAGGGGACACAAGGCAT...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 90 bp | CCAGAGCAGCCTGCCCAGGCCCTGGTTATTTTGAGAGAATCCTTCTaGAGAGCCATAGAACCTTCGGCATCCCTCACCCTCTTTCCAAGG | + |
Preference number: 2 (lower is better) Translates to: PEQPAQALVILRESF*RAIEPSASLTLFPR Trigger: CCTTGGAAAGAGGGTGAGGGATGCCGAAGGTTCTATGGCTCTCAAGAAGGATTCTCTCAAAATAACCAGGGCCTGGGCAGGCTGCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTCGTCAGTTGAGTCCCTaGTCTTCTGGCTTCTGGTCC | + |
Preference number: 2 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSRQLSP*SSGFWS Trigger: GGACCAGAAGCCAGAAGATCAGGGACTCAACTGACG...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTTCCGCCTTGTCCCTGTaGCCTCCTCCAAAGTTCACA | + |
Preference number: 2 (lower is better) Translates to: WHTPPHPAYLCLFSLLPISALSL*PPPKFT Trigger: TGTGAACTTTGGAGGAGGGCACAGGGACAAGGCGGA...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTATGCTGCCGAGCAGATaGAGTGGGAGGACGAATGAC | + |
Preference number: 2 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSMLPSR*SGRTND Trigger: GTCATTCGTCCTCCCACTCCATCTGCTCGGCAGCAT...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCTCCAGCAATGTCACCTaGAGTGCAGTGGCCCTCCTT | + |
Preference number: 2 (lower is better) Translates to: ILGSMPVKSFGASACYITSSNVT*SAVALL Trigger: AAGGAGGGCCACTGCACTGCAGGTGACATTGCTGGA...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCAGAGTGAGTGCCTGCTaGCTTCAGGGTCCCCCGGGA | + |
Preference number: 2 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIRVSAC*LQGPPG Trigger: TCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCT...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGCAGAAGTTGCTGGAATaGCTTGTGTCCCCTGGGGAC | + |
Preference number: 2 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKQKLLE*LVSPGD Trigger: GTCCCCAGGGGACACAAGGCATTCCAGCAACTTCTG...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTTTTGGAGCCTCTGCATaGTACATCACCACCATCTCC | + |
Preference number: 2 (lower is better) Translates to: WHTPPHPAYLCLFSLLPIFGASA*YITTIS Trigger: GGAGATGGTGGTGATGTAGCATGCAGAGGCTCCAAA...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTGGGCTTTGCCCTCTCTaGGCCCTGGTTCCACTTTCT | + |
Preference number: 2 (lower is better) Translates to: LWLPSRSCVKVFFWERVLGLCPL*ALVPLS Trigger: AGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCC...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTCGTCAGTTGAGTCCCTaGTCTTCTGGCTTCTGGTCC | + |
Preference number: 2 (lower is better) Translates to: LWLPSRSCVKVFFWERVLRQLSP*SSGFWS Trigger: GGACCAGAAGCCAGAAGATCAGGGACTCAACTGACG...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGAATGACCGGAGTGGCTaGGAAACAGGAACCAGGAGA | + |
Preference number: 2 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKNDRSG*ETGTRR Trigger: TCTCCTGGTTCCTGTTTCTCAGCCACTCCGGTCATT...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCGGGGCCAGAGCAGCCTaGCCAGGCCCTGGTTATTTT | + |
Preference number: 2 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIGARAA*PGPGYF Trigger: AAAATAACCAGGGCCTGGGCAGGCTGCTCTGGCCCC...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCTTCTGCAGAAGTTGCTaGAATGCCTTGTGTCCCCTG | + |
Preference number: 2 (lower is better) Translates to: ILGSMPVKSFGASACYITFCRSC*NALCPL Trigger: CAGGGGACACAAGGCATTCCAGCAACTTCTGCAGAA...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCATAGGGGATGGGAAATaGGGGAGGCAGACACATTTC | + |
Preference number: 2 (lower is better) Translates to: ILGSMPVKSFGASACYITIGDGK*GRQTHF Trigger: GAAATGTGTCTGCCTCCCCCATTTCCCATCCCCTAT...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTACTCACTTCCCCTCATaGCAGGCAGCTCATTTCCAC | + |
Preference number: 2 (lower is better) Translates to: LWLPSRSCVKVFFWERVLTHFPS*QAAHFH Trigger: GTGGAAATGAGCTGCCTGGCATGAGGGGAAGTGAGT...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTTCCAAGCTTGGGCTTTaGCCTCTCTGGGCCCTGGTT | + |
Preference number: 2 (lower is better) Translates to: LLSFGFESLKYPRLTLNPSKLGL*PLWALV Trigger: AACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGA...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTAGACAGAGAGATGGATaGAGGAGCCCAGGGGCCAGA | + |
Preference number: 2 (lower is better) Translates to: LLSFGFESLKYPRLTLNPRQRDG*RSPGAR Trigger: TCTGGCCCCTGGGCTCCTCCATCCATCTCTCTGTCT...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTTCACCTGCAGTGCAGTaGCCCTCCTTTCTTCTCACT | + |
Preference number: 2 (lower is better) Translates to: LWLPSRSCVKVFFWERVLSPAVQ*PSFLLT Trigger: AGTGAGAAGAAAGGAGGGCCACTGCACTGCAGGTGA...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCTGTGTGGTCCAAGCTTaGGCTTTGCCCTCTCTGGGC | + |
Preference number: 2 (lower is better) Translates to: QYLRTDWSTQTGLFCGFICVVQA*ALPSLG Trigger: GCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACA...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGCCCCCGGGAGTTTGTTaGATGAATGAGGGAAACTTT | + |
Preference number: 2 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKPPGVC*MNEGNF Trigger: AAAGTTTCCCTCATTCATTCAACAAACTCCCGGGGG...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTGTCCTTTGGAGCCTCTaGATGCTACATCACCACCAT | + |
Preference number: 2 (lower is better) Translates to: LWLPSRSCVKVFFWERVLVLWSL*MLHHHH Trigger: ATGGTGGTGATGTAGCATGCAGAGGCTCCAAAGGAC...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGGTCCACAGAAGCCTCTaGGAATTTTTCTGCTCCCTA | + |
Preference number: 2 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKVHRSL*EFFCSL Trigger: TAGGGAGCAGAAAAATTCCCAGAGGCTTCTGTGGAC...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCATGGGGGCACAGGCTTaGGACATGCATCCTAGGAAG | + |
Preference number: 2 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIMGAQA*DMHPRK Trigger: CTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCAT...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCCACCCAGCTTACCTCTaGCTGTTTTCTCTTCTCCCG | + |
Preference number: 2 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIHPAYL*LFSLLP Trigger: CGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTG...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | GTGGCCCTCCTTTCTTCTCACTTCCTCTTAGGGGTTCAAGATTTCCAAGTCAGAGACACCCCCAGACTCTaGGGATCAAATATGTGGTTT | + |
Preference number: 2 (lower is better) Translates to: VALLSSHFLLGVQDFQVRDTPRL*GSNMWF Trigger: AAACCACATATTTGATCCCCAGAGTCTGGGGGTGTC...TCTGACTTGGAAATCTTGAACCCCTAAGAGGAAGTGAGAAGAAAGGAGGGCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | ATCTTTCAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTCTCAGACCATTTCTGTaGCAGGCATGTGTCCAGCAA | + |
Preference number: 2 (lower is better) Translates to: IFQYLRTDWSTQTGLFCGLRPFL*QACVQQ Trigger: TTGCTGGACACATGCCTGGCACAGAAATGGTCTGAG...ACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTGAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTGTCCTTTGGAGCCTCTaGATGCTACATCACCACCAT | + |
Preference number: 2 (lower is better) Translates to: LLSFGFESLKYPRLTLNPVLWSL*MLHHHH Trigger: ATGGTGGTGATGTAGCATGCAGAGGCTCCAAAGGAC...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTATAGGGGATGGGAAATaGGGGAGGCAGACACATTTC | + |
Preference number: 2 (lower is better) Translates to: LLSFGFESLKYPRLTLNPIGDGK*GRQTHF Trigger: GAAATGTGTCTGCCTCCCCCATTTCCCATCCCCTAT...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCGCCTGTGAAGTCCTTTaGAGCCTCTGCATGCTACAT | + |
Preference number: 2 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIACEVL*SLCMLH Trigger: ATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGC...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTCCAGGATTCTTTGCTTaGAGGCCTGGGACTTTTCTG | + |
Preference number: 2 (lower is better) Translates to: LLSFGFESLKYPRLTLNPPGFFA*RPGTFL Trigger: CAGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGG...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | ATCTTTCAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTGAAAGTTCTGCTGTGTaGTCCAAGCTTGGGCTTTGC | + |
Preference number: 2 (lower is better) Translates to: IFQYLRTDWSTQTGLFCGESSAV*SKLGLC Trigger: GCAAAGCCCAAGCTTGGACCACACAGCAGAACTTTC...ACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTGAAAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCAGGCAGACACATTTCTaGAGAAGTTGCTGGAATGCC | + |
Preference number: 2 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIRQTHF*RSCWNA Trigger: GGCATTCCAGCAACTTCTGCAGAAATGTGTCTGCCT...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTGACACCCCCAGACTCTaGGGATCAAATATGTGGTTT | + |
Preference number: 2 (lower is better) Translates to: LLSFGFESLKYPRLTLNPDTPRL*GSNMWF Trigger: AAACCACATATTTGATCCCCAGAGTCTGGGGGTGTC...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | GTTTCTATGTTTGCCCAGATAACAATATTGACAGCAGTAACAGTAACACCCTCTCAATGTCACCTGCAGTaGAGTGGCCCTCCTTTCTTC | + |
Preference number: 2 (lower is better) Translates to: VSMFAQITILTAVTVTPSQCHLQ*SGPPFF Trigger: GAAGAAAGGAGGGCCACTGCACTGCAGGTGACATTG...AGAGGGTGTTACTGTTACTGCTGTCAATATTGTTATCTGGGCAAACATAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR GCA 90 bp | GTTTCTATGTTTGCCCAGATAACAATATTGACAGCAGTAACAGTAACACCCTCTACTCACTTCCCCTCATaGCAGGCAGCTCATTTCCAC | + |
Preference number: 2 (lower is better) Translates to: VSMFAQITILTAVTVTPSTHFPS*QAAHFH Trigger: GTGGAAATGAGCTGCCTGGCATGAGGGGAAGTGAGT...AGAGGGTGTTACTGTTACTGCTGTCAATATTGTTATCTGGGCAAACATAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CCA 90 bp | GTTTCTATGTTTGCCCAGATAACAATATTGACAGCAGTAACAGTAACACCCTCTAAGTCAGATAGGGGATaGGAAATGGGGGAGGCAGAC | + |
Preference number: 2 (lower is better) Translates to: VSMFAQITILTAVTVTPSKSDRG*EMGEAD Trigger: GTCTGCCTCCCCCATTTCCCATCCCCTATCTGACTT...AGAGGGTGTTACTGTTACTGCTGTCAATATTGTTATCTGGGCAAACATAGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | ATCTTTCAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTCGGGAGTTTGTTGAATaGATGAGGGAAACTTTTGTG | + |
Preference number: 2 (lower is better) Translates to: IFQYLRTDWSTQTGLFCGREFVE*MRETFV Trigger: CACAAAAGTTTCCCTCATTCATTCAACAAACTCCCG...ACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTGAAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR TCA 90 bp | GTTTCTATGTTTGCCCAGATAACAATATTGACAGCAGTAACAGTAACACCCTCTAGTTTGTTGAATGAATaGGGGAAACTTTTGTGGAGA | + |
Preference number: 2 (lower is better) Translates to: VSMFAQITILTAVTVTPSSLLNE*GKLLWR Trigger: TCTCCACAAAAGTTTCCCTCATTCATTCAACAAACT...AGAGGGTGTTACTGTTACTGCTGTCAATATTGTTATCTGGGCAAACATAGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | GAAACATCAGCAGGAGCACTGGCTTGCCCTCCCGCATaGAGCCCGGCCCTCCAGCTGACTCACTTCCCCTCA | + |
Preference number: 3 (lower is better) Translates to: ETSAGALACPPA*SPALQLTHFPS Trigger: TGAGGGGAAGTGAGTCAGCTGGAGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | CAGGAACCAGGAGAAACATCAGCAGGAGCACTGGCTTaGCCTCCCGCATGCAGCCCGGCCCTCCAGCTGACT | + |
Preference number: 3 (lower is better) Translates to: QEPGETSAGALA*PPACSPALQLT Trigger: AGTCAGCTGGAGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCTGGTTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | TGCAGCCCGGCCCTCCAGCTGACTCACTTCCCCTCATaGCAGGCAGCTCATTTCCACGCACCCAGGATTCTT | + |
Preference number: 3 (lower is better) Translates to: CSPALQLTHFPS*QAAHFHAPRIL Trigger: AAGAATCCTGGGTGCGTGGAAATGAGCTGCCTGGCATGAGGGGAAGTGAGTCAGCTGGAGGGCCGGGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR TCA 72 bp | GGACTTTTCTGCGACCCTGATCCGAGGGAGGAAGAGTaGGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTTT | + |
Preference number: 3 (lower is better) Translates to: GLFCDPDPREEE*VPADFRVPREF Trigger: AAACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAGGGTCGCAGAAAAGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTACCACCATCTCCGCCTaGTCCCTGTGCCCTCCTCCA | + |
Preference number: 3 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSTTISA*SLCPPP Trigger: TGGAGGAGGGCACAGGGACAAGGCGGAGATGGTGGT...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTGTCCAAGCTTGGGCTTaGCCCTCTCTGGGCCCTGGT | + |
Preference number: 3 (lower is better) Translates to: WHTPPHPAYLCLFSLLPIVQAWA*PSLGPG Trigger: ACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGAC...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | GCATGCTACATCACCACCATCTCCGCCTTGTCCCTGTaGCCTCCTCCAAAGTTCACACAGCGCAGTTCCCCA | + |
Preference number: 3 (lower is better) Translates to: ACYITTISALSL*PPPKFTQRSSP Trigger: TGGGGAACTGCGCTGTGTGAACTTTGGAGGAGGGCACAGGGACAAGGCGGAGATGGTGGTGATGTAGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | TTTTCTGCGACCCTGATCCGAGGGAGGAAGAGTGAGTaGCTGCTGACTTCAGGGTCCCCCGGGAGTTTGTTG | + |
Preference number: 3 (lower is better) Translates to: FSATLIRGRKSE*LLTSGSPGSLL Trigger: CAACAAACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAGGGTCGCAGAAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 72 bp | TCTGCTGTGTGGTCCAAGCTTGGGCTTTGCCCTCTCTaGGCCCTGGTTCCACTTTCTCTGGAGAGGCTTTGC | + |
Preference number: 3 (lower is better) Translates to: SAVWSKLGLCPL*ALVPLSLERLC Trigger: GCAAAGCCTCTCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | CTGATCCGAGGGAGGAAGAGTGAGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTTCCAAAGATGGTGAGTaGTGGTCCAGTTCTGAAAGG | + |
Preference number: 3 (lower is better) Translates to: LIRGRKSECLLTSGSPGSSKDGE*WSSSER Trigger: CCTTTCAGAACTGGACCACAACTCACCATCTTTGGA...ACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | GGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATaGTACATCACCACCATCTCCGCCTTGTCCCTGTGC | + |
Preference number: 3 (lower is better) Translates to: GSMPVKSFGASA*YITTISALSLC Trigger: GCACAGGGACAAGGCGGAGATGGTGGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | CCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTaGATGCTACATCACCACCATCTCCGCCTTGTCCCT | + |
Preference number: 3 (lower is better) Translates to: PRKHACEVLWSL*MLHHHHLRLVP Trigger: AGGGACAAGGCGGAGATGGTGGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 72 bp | GTGGCAGTAAGTTGTTCCAGGATGGGGGCACAGGCTTaGGACATGCATCCTAGGAAGCATGCCTGTGAAGTC | + |
Preference number: 3 (lower is better) Translates to: VAVSCSRMGAQA*DMHPRKHACEV Trigger: GACTTCACAGGCATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTACTGCCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTGTCCAAGCTTGGGCTTaGCCCTCTCTGGGCCCTGGT | + |
Preference number: 3 (lower is better) Translates to: LWLPSRSCVKVFFWERVLVQAWA*PSLGPG Trigger: ACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGAC...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | GGTTCCACTTTCTCTGGAGAGGCTTTGCTAATATGCTaGCGAGCAGATGGAGTGGGAGGACGAATGACCGGA | + |
Preference number: 3 (lower is better) Translates to: GSTFSGEALLIC*RADGVGGRMTG Trigger: TCCGGTCATTCGTCCTCCCACTCCATCTGCTCGGCAGCATATTAGCAAAGCCTCTCCAGAGAAAGTGGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | CCTGGTTCCACTTTCTCTGGAGAGGCTTTGCTAATATaGTGCCGAGCAGATGGAGTGGGAGGACGAATGACC | + |
Preference number: 3 (lower is better) Translates to: PGSTFSGEALLI*CRADGVGGRMT Trigger: GGTCATTCGTCCTCCCACTCCATCTGCTCGGCAGCATATTAGCAAAGCCTCTCCAGAGAAAGTGGAACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 72 bp | GACATGCATCCTAGGAAGCATGCCTGTGAAGTCCTTTaGAGCCTCTGCATGCTACATCACCACCATCTCCGC | + |
Preference number: 3 (lower is better) Translates to: DMHPRKHACEVL*SLCMLHHHHLR Trigger: GCGGAGATGGTGGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGATGCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | GGAGGACGAATGACCGGAGTGGCTGAGAAACAGGAACCAGGAGAAACATCAGCAAAAGGTGGCAGTAAGTaGTTCCAGGATGGGGGCACA | + |
Preference number: 3 (lower is better) Translates to: GGRMTGVAEKQEPGETSAKGGSK*FQDGGT Trigger: TGTGCCCCCATCCTGGAACAACTTACTGCCACCTTT...TGCTGATGTTTCTCCTGGTTCCTGTTTCTCAGCCACTCCGGTCATTCGTCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CCA 72 bp | GCAGCAGACACCCCCAGACTCTGGGGATCAAATATGTaGTTTCTGCTACCGTCAGTTGAGTCCCTGATCTTC | + |
Preference number: 3 (lower is better) Translates to: AADTPRLWGSNM*FLLPSVESLIF Trigger: GAAGATCAGGGACTCAACTGACGGTAGCAGAAACCACATATTTGATCCCCAGAGTCTGGGGGTGTCTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | GACACATTTCTGCAGAAGTTGCTGGAATGCCTTGTGTCCCCTGGGGACCTGGGGTTGAGAGAATCCTTCTaGAGAGCCATAGAACCTTCG | + |
Preference number: 3 (lower is better) Translates to: DTFLQKLLECLVSPGDLGLRESF*RAIEPS Trigger: CGAAGGTTCTATGGCTCTCAAGAAGGATTCTCTCAA...CCCCAGGTCCCCAGGGGACACAAGGCATTCCAGCAACTTCTGCAGAAATGTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCACCACCATCTCCGCCTaGTCCCTGTGCCCTCCTCCA | + |
Preference number: 3 (lower is better) Translates to: QYLRTDWSTQTGLFCGFITTISA*SLCPPP Trigger: TGGAGGAGGGCACAGGGACAAGGCGGAGATGGTGGT...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTAGTTGCTGGAATGCCTaGTGTCCCCTGGGGACCTGG | + |
Preference number: 3 (lower is better) Translates to: LLSFGFESLKYPRLTLNPSCWNA*CPLGTW Trigger: CCAGGTCCCCAGGGGACACAAGGCATTCCAGCAACT...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTACATTTCTGCAGAAGTaGCTGGAATGCCTTGTGTCC | + |
Preference number: 3 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSTFLQK*LECLVS Trigger: GGACACAAGGCATTCCAGCAACTTCTGCAGAAATGT...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGCCCAGGATTCTTTGCTaGGAGGCCTGGGACTTTTCT | + |
Preference number: 3 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKPRILC*EAWDFS Trigger: AGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGGG...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR TCA 72 bp | CAAATATGTGGTTTCTGCTACCGTCAGTTGAGTCCCTaGTCTTCTGGCTTCTGGTCCTGTGACAGCGGGCTT | + |
Preference number: 3 (lower is better) Translates to: QICGFCYRQLSP*SSGFWSCDSGL Trigger: AAGCCCGCTGTCACAGGACCAGAAGCCAGAAGATCAGGGACTCAACTGACGGTAGCAGAAACCACATATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR GCA 72 bp | GCGTTGTGGCACACACCTCCACACCCAGCTTACCTCTaGCTGTTTTCTCTTCTCCCGATTCTCTTTGCTTTT | + |
Preference number: 3 (lower is better) Translates to: ALWHTPPHPAYL*LFSLLPILFAF Trigger: AAAAGCAAAGAGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCACAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCAGGCCCTGGTTATTTaGAGAGAATCCTTCTTGAGA | + |
Preference number: 3 (lower is better) Translates to: WHTPPHPAYLCLFSLLPIQALVI*RESFLR Trigger: TCTCAAGAAGGATTCTCTCAAAATAACCAGGGCCTG...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | GTAAGTTGTTCCAGGATGGGGGCACAGGCTTGGGACATGCATCCTAGGAAGCATCAGGCCCTGGTTATTTaGAGAGAATCCTTCTTGAGA | + |
Preference number: 3 (lower is better) Translates to: VSCSRMGAQAWDMHPRKHQALVI*RESFLR Trigger: TCTCAAGAAGGATTCTCTCAAAATAACCAGGGCCTG...ATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCACATTTCTGCAGAAGTaGCTGGAATGCCTTGTGTCC | + |
Preference number: 3 (lower is better) Translates to: ILGSMPVKSFGASACYITTFLQK*LECLVS Trigger: GGACACAAGGCATTCCAGCAACTTCTGCAGAAATGT...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR TCA 72 bp | CTGGGGATCAAATATGTGGTTTCTGCTACCGTCAGTTaGGTCCCTGATCTTCTGGCTTCTGGTCCTGTGACA | + |
Preference number: 3 (lower is better) Translates to: LGIKYVVSATVS*VPDLLASGPVT Trigger: TGTCACAGGACCAGAAGCCAGAAGATCAGGGACTCAACTGACGGTAGCAGAAACCACATATTTGATCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR TCA 72 bp | CCTGCTGACTTCAGGGTCCCCCGGGAGTTTGTTGAATaGATGAGGGAAACTTTTGTGGAGATTCCAAAGATG | + |
Preference number: 3 (lower is better) Translates to: PADFRVPREFVE*MRETFVEIPKM Trigger: CATCTTTGGAATCTCCACAAAAGTTTCCCTCATTCATTCAACAAACTCCCGGGGGACCCTGAAGTCAGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTAAAGGTGGCAGTAAGTaGTTCCAGGATGGGGGCACA | + |
Preference number: 3 (lower is better) Translates to: LLSFGFESLKYPRLTLNPKGGSK*FQDGGT Trigger: TGTGCCCCCATCCTGGAACAACTTACTGCCACCTTT...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTGCCCAGATAACAATATaGACAGCAGTAACAGTAACA | + |
Preference number: 3 (lower is better) Translates to: WHTPPHPAYLCLFSLLPIAQITI*TAVTVT Trigger: TGTTACTGTTACTGCTGTCAATATTGTTATCTGGGC...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | ATCTTTCAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTCCAAAGATGGTGAGTaGTGGTCCAGTTCTGAAAGG | + |
Preference number: 3 (lower is better) Translates to: IFQYLRTDWSTQTGLFCGSKDGE*WSSSER Trigger: CCTTTCAGAACTGGACCACAACTCACCATCTTTGGA...ACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTGAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTTTGAGAGAATCCTTCTaGAGAGCCATAGAACCTTCG | + |
Preference number: 3 (lower is better) Translates to: LLSFGFESLKYPRLTLNPLRESF*RAIEPS Trigger: CGAAGGTTCTATGGCTCTCAAGAAGGATTCTCTCAA...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR-3UTR CAA 90 bp | ATCTTTCAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTGCCCAGATAACAATATaGACAGCAGTAACAGTAACA | + |
Preference number: 3 (lower is better) Translates to: IFQYLRTDWSTQTGLFCGAQITI*TAVTVT Trigger: TGTTACTGTTACTGCTGTCAATATTGTTATCTGGGC...ACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTGAAAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | ACAGGAACCAGGAGAAACATCAGCAGGAGCACTGGCTaGCCCTCCCGCATGCAGCCCGGCCCTCCAGCTGAC | + |
Preference number: 4 (lower is better) Translates to: TGTRRNISRSTG*PSRMQPGPPAD Trigger: GTCAGCTGGAGGGCCGGGCTGCATGCGGGAGGGCAAGCCAGTGCTCCTGCTGATGTTTCTCCTGGTTCCTGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | CTGATCCGAGGGAGGAAGAGTGAGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTCCATGGCAAAGAGGATaGGCGTGGAGGCCAGGCCGA | + |
Preference number: 4 (lower is better) Translates to: LIRGRKSECLLTSGSPGSPWQRG*AWRPGR Trigger: TCGGCCTGGCCTCCACGCTCATCCTCTTTGCCATGG...ACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | CTGATCCGAGGGAGGAAGAGTGAGTGCCTGCTGACTTCAGGGTCCCCCGGGAGTGGTCCCCCATCTCTCTaGTGTCTGGGGCGATGGCCT | + |
Preference number: 4 (lower is better) Translates to: LIRGRKSECLLTSGSPGSGPPSL*CLGRWP Trigger: AGGCCATCGCCCCAGACAGCAGAGAGATGGGGGACC...ACTCCCGGGGGACCCTGAAGTCAGCAGGCACTCACTCTTCCTCCCTCGGATCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | ACCCTCTTTCCAAGGCCTCTAGCCACCATACCGAAGGAGGAGAAGCAGCAGCAGCCACTCTCTGCCACCTaGACTGAGAGGGCTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: TLFPRPLATIPKEEKQQQPLSAT*TERAPR Trigger: CCTGGGAGCCCTCTCAGTGCAGGTGGCAGAGAGTGG...CTGCTGCTGCTTCTCCTCCTTCGGTATGGTGGCTAGAGGCCTTGGAAAGAGGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GACACATTTCTGCAGAAGTTGCTGGAATGCCTTGTGTCCCCTGGGGACCTGGGGAGCAGGAGCCTGCCATaGCCTGCCACTCTCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: DTFLQKLLECLVSPGDLGSRSLP*PATLCH Trigger: GTGGCAGAGAGTGGCAGGGCATGGCAGGCTCCTGCT...CCCCAGGTCCCCAGGGGACACAAGGCATTCCAGCAACTTCTGCAGAAATGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | GGAGCCTCTGCATGCTACATCACCACCATCTCCGCCTaGTCCCTGTGCCCTCCTCCAAAGTTCACACAGCGC | + |
Preference number: 4 (lower is better) Translates to: GASACYITTISA*SLCPPPKFTQR Trigger: GCGCTGTGTGAACTTTGGAGGAGGGCACAGGGACAAGGCGGAGATGGTGGTGATGTAGCATGCAGAGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GGAGGACGAATGACCGGAGTGGCTGAGAAACAGGAACCAGGAGAAACATCAGCAAGCATCGTCCCACCGTaGGCCAGGCCCAGCAGAGAG | + |
Preference number: 4 (lower is better) Translates to: GGRMTGVAEKQEPGETSASIVPP*ARPSRE Trigger: CTCTCTGCTGGGCCTGGCCCACGGTGGGACGATGCT...TGCTGATGTTTCTCCTGGTTCCTGTTTCTCAGCCACTCCGGTCATTCGTCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCCCTGGGCAATACTGCTaGTGCTCGCCCAGGCCCAGC | + |
Preference number: 4 (lower is better) Translates to: ILGSMPVKSFGASACYITPGQYC*CSPRPS Trigger: GCTGGGCCTGGGCGAGCATCAGCAGTATTGCCCAGG...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCGAGCCTGCCATGCCCTaGCACTCTCTGCCACCTGCA | + |
Preference number: 4 (lower is better) Translates to: ILGSMPVKSFGASACYITEPAMP*HSLPPA Trigger: TGCAGGTGGCAGAGAGTGGCAGGGCATGGCAGGCTC...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GTAAGTTGTTCCAGGATGGGGGCACAGGCTTGGGACATGCATCCTAGGAAGCATGTCTCTTCTCCCCGATaGAGGTCTGGAAAGGGGCGC | + |
Preference number: 4 (lower is better) Translates to: VSCSRMGAQAWDMHPRKHVSSPR*RSGKGR Trigger: GCGCCCCTTTCCAGACCTGCATCGGGGAGAAGAGAC...ATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTGTCTCTTCTCCCCGATaGAGGTCTGGAAAGGGGCGC | + |
Preference number: 4 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSVSSPR*RSGKGR Trigger: GCGCCCCTTTCCAGACCTGCATCGGGGAGAAGAGAC...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTCACAGCAGTCAATGGTaGCACCTGTCCCGTGCCCCA | + |
Preference number: 4 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSHSSQW*HLSRAP Trigger: TGGGGCACGGGACAGGTGGCACCATTGACTGCTGTG...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCCAATGCCAGCCCGTTaGCCACTACACCAGCCACGA | + |
Preference number: 4 (lower is better) Translates to: WHTPPHPAYLCLFSLLPIPMPAR*PLHQPR Trigger: TCGTGGCTGGTGTAGTGGGCAACGGGCTGGCATTGG...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GTAAGTTGTTCCAGGATGGGGGCACAGGCTTGGGACATGCATCCTAGGAAGCATACCCAGGATGCCCAATaGCAGCCCGTTGCCCACTAC | + |
Preference number: 4 (lower is better) Translates to: VSCSRMGAQAWDMHPRKHTQDAQ*QPVAHY Trigger: GTAGTGGGCAACGGGCTGGCATTGGGCATCCTGGGT...ATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GTAAGTTGTTCCAGGATGGGGGCACAGGCTTGGGACATGCATCCTAGGAAGCATGGCTCAAGAAGCACGTaGCCAGCAGATCCGTCACCG | + |
Preference number: 4 (lower is better) Translates to: VSCSRMGAQAWDMHPRKHGSRST*PADPSP Trigger: CGGTGACGGATCTGCTGGGCACGTGCTTCTTGAGCC...ATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | ACCCTCTTTCCAAGGCCTCTAGCCACCATACCGAAGGAGGAGAAGCAGCAGCAGCTCCCTTCCTTAGCCTaGAGAGAAGTAGGAGCCGGT | + |
Preference number: 4 (lower is better) Translates to: TLFPRPLATIPKEEKQQQLPSLA*REVGAG Trigger: ACCGGCTCCTACTTCTCTCCAGGCTAAGGAAGGGAG...CTGCTGCTGCTTCTCCTCCTTCGGTATGGTGGCTAGAGGCCTTGGAAAGAGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | CAGGCAGCTCATTTCCACGCACCCAGGATTCTTTGCTaGGAGGCCTGGGACTTTTCTGCGACCCTGATCCGA | + |
Preference number: 4 (lower is better) Translates to: QAAHFHAPRILC*EAWDFSATLIR Trigger: TCGGATCAGGGTCGCAGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | AGAGGCCGTGAGAAAGTTCTGCTGTGTGGTCCAAGCTaGGGCTTTGCCCTCTCTGGGCCCTGGTTCCACTTT | + |
Preference number: 4 (lower is better) Translates to: RGREKVLLCGPS*GFALSGPWFHF Trigger: AAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACAGCAGAACTTTCTCACGGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGGAGGGCTCCCAGGAGTaGCAGAAGGGGGTCCAGGAT | + |
Preference number: 4 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKEGSQE*QKGVQD Trigger: ATCCTGGACCCCCTTCTGTCACTCCTGGGAGCCCTC...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCGGCAGCGATGGCCTCTaGCTTGGATGGCATTCCCAC | + |
Preference number: 4 (lower is better) Translates to: ILGSMPVKSFGASACYITGSDGL*LGWHSH Trigger: GTGGGAATGCCATCCAAGTCAGAGGCCATCGCTGCC...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGCCACTCTCTGCCACCTaGACTGAGAGGGCTCCCAGG | + |
Preference number: 4 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKPLSAT*TERAPR Trigger: CCTGGGAGCCCTCTCAGTGCAGGTGGCAGAGAGTGG...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCCCACGAACATCAGCGTaGTGGTGGCAGGTCCTACCG | + |
Preference number: 4 (lower is better) Translates to: ILGSMPVKSFGASACYITPRTSA*WWQVLP Trigger: CGGTAGGACCTGCCACCAGCACGCTGATGTTCGTGG...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GGAGGACGAATGACCGGAGTGGCTGAGAAACAGGAACCAGGAGAAACATCAGCAGCCTGCAAATCCCCATaGACAGAACGGGCACACAGG | + |
Preference number: 4 (lower is better) Translates to: GGRMTGVAEKQEPGETSAACKSP*TERAHR Trigger: CCTGTGTGCCCGTTCTGTCCATGGGGATTTGCAGGC...TGCTGATGTTTCTCCTGGTTCCTGTTTCTCAGCCACTCCGGTCATTCGTCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | ATGCCAGGCAGCTCATTTCCACGCACCCAGGATTCTTaGCTTGGAGGCCTGGGACTTTTCTGCGACCCTGAT | + |
Preference number: 4 (lower is better) Translates to: MPGSSFPRTQDS*LGGLGLFCDPD Trigger: ATCAGGGTCGCAGAAAAGTCCCAGGCCTCCAAGCAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTGGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | TCTCTGGGCCCTGGTTCCACTTTCTCTGGAGAGGCTTaGCTAATATGCTGCCGAGCAGATGGAGTGGGAGGA | + |
Preference number: 4 (lower is better) Translates to: SLGPGSTFSGEA*LICCRADGVGG Trigger: TCCTCCCACTCCATCTGCTCGGCAGCATATTAGCAAAGCCTCTCCAGAGAAAGTGGAACCAGGGCCCAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | GTGAGAAAGTTCTGCTGTGTGGTCCAAGCTTGGGCTTaGCCCTCTCTGGGCCCTGGTTCCACTTTCTCTGGA | + |
Preference number: 4 (lower is better) Translates to: VRKFCCVVQAWA*PSLGPGSTFSG Trigger: TCCAGAGAAAGTGGAACCAGGGCCCAGAGAGGGCAAAGCCCAAGCTTGGACCACACAGCAGAACTTTCTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGGGCAGCGATGGCCTCTaGCTTGGATGGCATTCCCAC | + |
Preference number: 4 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKGSDGL*LGWHSH Trigger: GTGGGAATGCCATCCAAGTCAGAGGCCATCGCTGCC...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | GTGGCCCTCCTTTCTTCTCACTTCCTCTTAGGGGTTCAAGATTTCCAAGTCAGAACAGGTAGGGGTGACTaGGTGCCAGGCACCGCTCCA | + |
Preference number: 4 (lower is better) Translates to: VALLSSHFLLGVQDFQVRTGRGD*VPGTAP Trigger: TGGAGCGGTGCCTGGCACTCAGTCACCCCTACCTGT...TCTGACTTGGAAATCTTGAACCCCTAAGAGGAAGTGAGAAGAAAGGAGGGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | GTGGCCCTCCTTTCTTCTCACTTCCTCTTAGGGGTTCAAGATTTCCAAGTCAGAGGTCCCCCATCTCTCTaGTGTCTGGGGCGATGGCCT | + |
Preference number: 4 (lower is better) Translates to: VALLSSHFLLGVQDFQVRGPPSL*CLGRWP Trigger: AGGCCATCGCCCCAGACAGCAGAGAGATGGGGGACC...TCTGACTTGGAAATCTTGAACCCCTAAGAGGAAGTGAGAAGAAAGGAGGGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTCGATGGCCTCTGACTTaGATGGCATTCCCACAGAGC | + |
Preference number: 4 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSRWPLT*MAFPQS Trigger: GCTCTGTGGGAATGCCATCCAAGTCAGAGGCCATCG...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GACTCACTTCCCCTCATGCCAGGCAGCTCATTTCCACGCACCCAGGATTCTTTGCGTTGCAGAAGAAGATaGAGGTCACCAACAGGGCCA | + |
Preference number: 4 (lower is better) Translates to: DSLPLMPGSSFPRTQDSLRCRRR*RSPTGP Trigger: TGGCCCTGTTGGTGACCTCCATCTTCTTCTGCAACG...CAAAGAATCCTGGGTGCGTGGAAATGAGCTGCCTGGCATGAGGGGAAGTGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GGAGGACGAATGACCGGAGTGGCTGAGAAACAGGAACCAGGAGAAACATCAGCAACAAACGAGCCATGGTaGCGTCTCTGTTGGCGGTAC | + |
Preference number: 4 (lower is better) Translates to: GGRMTGVAEKQEPGETSATNEPW*RLCWRY Trigger: GTACCGCCAACAGAGACGCCACCATGGCTCGTTTGT...TGCTGATGTTTCTCCTGGTTCCTGTTTCTCAGCCACTCCGGTCATTCGTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | CCTGCCCAGGCCCTGGTTATTTTGAGAGAATCCTTCTaGAGAGCCATAGAACCTTCGGCATCCCTCACCCTC | + |
Preference number: 4 (lower is better) Translates to: PAQALVILRESF*RAIEPSASLTL Trigger: GAGGGTGAGGGATGCCGAAGGTTCTATGGCTCTCAAGAAGGATTCTCTCAAAATAACCAGGGCCTGGGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
3UTR CAA 72 bp | GTGAGTTGTGGTCCAGTTCTGAAAGGTGGCAGTAAGTaGTTCCAGGATGGGGGCACAGGCTTGGGACATGCA | + |
Preference number: 4 (lower is better) Translates to: VSCGPVLKGGSK*FQDGGTGLGHA Trigger: TGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTACTGCCACCTTTCAGAACTGGACCACAACTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTTCACCGCCAGCCCAGTaGCCAACACCGCAAAGGCCG | + |
Preference number: 4 (lower is better) Translates to: LLSFGFESLKYPRLTLNPSPPAQ*PTPQRP Trigger: CGGCCTTTGCGGTGTTGGTCACTGGGCTGGCGGTGA...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GTGGCCCTCCTTTCTTCTCACTTCCTCTTAGGGGTTCAAGATTTCCAAGTCAGAGGGAGCAGGCAGCGATaGCCTCTGACTTGGATGGCA | + |
Preference number: 4 (lower is better) Translates to: VALLSSHFLLGVQDFQVRGSRQR*PLTWMA Trigger: TGCCATCCAAGTCAGAGGCCATCGCTGCCTGCTCCC...TCTGACTTGGAAATCTTGAACCCCTAAGAGGAAGTGAGAAGAAAGGAGGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR TCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTGAGGGCTCCCAGGAGTaGCAGAAGGGGGTCCAGGAT | + |
Preference number: 4 (lower is better) Translates to: LLSFGFESLKYPRLTLNPEGSQE*QKGVQD Trigger: ATCCTGGACCCCCTTCTGTCACTCCTGGGAGCCCTC...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCGAGCCTGCCATGCCCTaGCACTCTCTGCCACCTGCA | + |
Preference number: 4 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIEPAMP*HSLPPA Trigger: TGCAGGTGGCAGAGAGTGGCAGGGCATGGCAGGCTC...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTGCCTGCAAATCCCCATaGACAGAACGGGCACACAGG | + |
Preference number: 4 (lower is better) Translates to: LWLPSRSCVKVFFWERVLACKSP*TERAHR Trigger: CCTGTGTGCCCGTTCTGTCCATGGGGATTTGCAGGC...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GACAGCAGTAACAGTAACACCCTCTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGCGATGGCCTCTGACTTaGATGGCATTCCCACAGAGC | + |
Preference number: 4 (lower is better) Translates to: DSSNSNTLCGFLPGPVLKRWPLT*MAFPQS Trigger: GCTCTGTGGGAATGCCATCCAAGTCAGAGGCCATCG...CTTTAACACAGGACCTGGAAGGAAGCCACAGAGGGTGTTACTGTTACTGCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR GCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCCACAGCAGTCAATGGTaGCACCTGTCCCGTGCCCCA | + |
Preference number: 4 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIHSSQW*HLSRAP Trigger: TGGGGCACGGGACAGGTGGCACCATTGACTGCTGTG...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | GTAAGTTGTTCCAGGATGGGGGCACAGGCTTGGGACATGCATCCTAGGAAGCATCAGAACTTGAGGCGTTaGAAGACAGCCTTTCGGAAA | + |
Preference number: 4 (lower is better) Translates to: VSCSRMGAQAWDMHPRKHQNLRR*KTAFRK Trigger: TTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTG...ATGCTTCCTAGGATGCATGTCCCAAGCCTGTGCCCCCATCCTGGAACAACTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | TGGCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCAGAACTTGAGGCGTTaGAAGACAGCCTTTCGGAAA | + |
Preference number: 4 (lower is better) Translates to: WHTPPHPAYLCLFSLLPIQNLRR*KTAFRK Trigger: TTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTG...AATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | TTGTTGTCATTTGGTTTTGAGAGTCTCAAATACCCCAGGCTGACCTTGAACCCTGGGAGCAGGCAGCGATaGCCTCTGACTTGGATGGCA | + |
Preference number: 4 (lower is better) Translates to: LLSFGFESLKYPRLTLNPGSRQR*PLTWMA Trigger: TGCCATCCAAGTCAGAGGCCATCGCTGCCTGCTCCC...AGGGTTCAAGGTCAGCCTGGGGTATTTGAGACTCTCAAAACCAAATGACAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | CTGTGGCTTCCTTCCAGGTCCTGTGTTAAAGTGTTCTTTTGGGAGAGAGTCCTTGAAGCACCAGCTCCCTaGGCAATACTGCTGATGCTC | + |
Preference number: 4 (lower is better) Translates to: LWLPSRSCVKVFFWERVLEAPAP*AILLML Trigger: GAGCATCAGCAGTATTGCCCAGGGAGCTGGTGCTTC...AAGGACTCTCTCCCAAAAGAACACTTTAACACAGGACCTGGAAGGAAGCCACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR CCA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCGGCCGAAGAACGTCATaGCGAAGGCGAAAGTGTCAC | + |
Preference number: 4 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIGRRTS*RRRKCH Trigger: GTGACACTTTCGCCTTCGCCATGACGTTCTTCGGCC...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS TCA 90 bp | CGTCACCGCCAGCCCAGTGACCAACACCGCAAAGGCCGATGGGTGTaGCCTCCGTCGGGCACCCAGGATGCCCAATGCCAGCCCGTTGCC | + |
Preference number: 5 (lower is better) Translates to: RHRQPSDQHRKGRWV*PPSGTQDAQCQPVA Trigger: GGCAACGGGCTGGCATTGGGCATCCTGGGTGCCCGACGGAGGTCACACCCATCGGCCTTTGCGGTGTTGGTCACTGGGCTGGCGGTGACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS GCA 90 bp | CACAGAGCAGCCGTCACCACCAGTCAGAGGCACAGCAGTCAATGGTaGCACCTGTCCCGTGCCCCAGGACGACAGGGGCACCCAGCTCCC | + |
Preference number: 5 (lower is better) Translates to: HRAAVTTSQRHSSQW*HLSRAPGRQGHPAP Trigger: GGGAGCTGGGTGCCCCTGTCGTCCTGGGGCACGGGACAGGTGGCACCATTGACTGCTGTGCCTCTGACTGGTGGTGACGGCTGCTCTGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS GCA 90 bp | GCAGCGCGGCCCGTCCAGCTGGGCGTACAGGTAGGGGTGACTGAGTaGCAGGCACCGCTCCACAGCCATGGCAAAGAGGATGAGCGTGGA | + |
Preference number: 5 (lower is better) Translates to: AARPVQLGVQVGVTE*QAPLHSHGKEDERG Trigger: TCCACGCTCATCCTCTTTGCCATGGCTGTGGAGCGGTGCCTGGCACTCAGTCACCCCTACCTGTACGCCCAGCTGGACGGGCCGCGCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS TCA 90 bp | GGCTCAAGAAGCACGTGCCCAGCAGATCCGTCACCGCCAGCCCAGTaGCCAACACCGCAAAGGCCGATGGGTGTGACCTCCGTCGGGCAC | + |
Preference number: 5 (lower is better) Translates to: GSRSTCPADPSPPAQ*PTPQRPMGVTSVGH Trigger: GTGCCCGACGGAGGTCACACCCATCGGCCTTTGCGGTGTTGGTCACTGGGCTGGCGGTGACGGATCTGCTGGGCACGTGCTTCTTGAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS GCA 90 bp | GGTGTGACCTCCGTCGGGCACCCAGGATGCCCAATGCCAGCCCGTTaGCCACTACACCAGCCACGAACATCAGCGTGCTGGTGGCAGGTC | + |
Preference number: 5 (lower is better) Translates to: GVTSVGHPGCPMPAR*PLHQPRTSACWWQV Trigger: GACCTGCCACCAGCACGCTGATGTTCGTGGCTGGTGTAGTGGGCAACGGGCTGGCATTGGGCATCCTGGGTGCCCGACGGAGGTCACACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CCA 90 bp | TCCCACAGAGCAGCCGTCACCACCAGTCAGAGGCACAGCAGTCAATaGTGCCACCTGTCCCGTGCCCCAGGACGACAGGGGCACCCAGCT | + |
Preference number: 5 (lower is better) Translates to: SHRAAVTTSQRHSSQ*CHLSRAPGRQGHPA Trigger: AGCTGGGTGCCCCTGTCGTCCTGGGGCACGGGACAGGTGGCACCATTGACTGCTGTGCCTCTGACTGGTGGTGACGGCTGCTCTGTGGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS GCA 90 bp | ACACCGCAAAGGCCGATGGGTGTGACCTCCGTCGGGCACCCAGGATaGCCAATGCCAGCCCGTTGCCCACTACACCAGCCACGAACATCA | + |
Preference number: 5 (lower is better) Translates to: TPQRPMGVTSVGHPG*PMPARCPLHQPRTS Trigger: TGATGTTCGTGGCTGGTGTAGTGGGCAACGGGCTGGCATTGGGCATCCTGGGTGCCCGACGGAGGTCACACCCATCGGCCTTTGCGGTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CCA 90 bp | GGCGTTGAAGCGGAAGGCGAGGAGGTCCCCCATCTCTCTGCTGTCTaGGGCGATGGCCTGAGTGAAGCCTCGGATCATGAGAGGCAGGGA | + |
Preference number: 5 (lower is better) Translates to: GVEAEGEEVPHLSAV*GDGLSEASDHERQG Trigger: TCCCTGCCTCTCATGATCCGAGGCTTCACTCAGGCCATCGCCCCAGACAGCAGAGAGATGGGGGACCTCCTCGCCTTCCGCTTCAACGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS GCA 90 bp | GGCCAGGCCCAGCAGAGAGCTGTTTCGAGCATAGGCCACAAACACTaGAGGGCTCAAGAAGCACGTGCCCAGCAGATCCGTCACCGCCAG | + |
Preference number: 5 (lower is better) Translates to: GQAQQRAVSSIGHKH*RAQEARAQQIRHRQ Trigger: CTGGCGGTGACGGATCTGCTGGGCACGTGCTTCTTGAGCCCTGCAGTGTTTGTGGCCTATGCTCGAAACAGCTCTCTGCTGGGCCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR CAA 90 bp | ACCCTCTTTCCAAGGCCTCTAGCCACCATACCGAAGGAGGAGAAGCAGCAGCAGCCCAATGCCAGCCCGTaGCCCACTACACCAGCCACG | + |
Preference number: 5 (lower is better) Translates to: TLFPRPLATIPKEEKQQQPNASP*PTTPAT Trigger: CGTGGCTGGTGTAGTGGGCAACGGGCTGGCATTGGG...CTGCTGCTGCTTCTCCTCCTTCGGTATGGTGGCTAGAGGCCTTGGAAAGAGGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS GCA 90 bp | GGTCATGAGGGCCAGCAGAATCAGGTGGTAAACTTCATCCTCTCGTaGCCGAGAGGTCGGTACAAACGAGCCATGGTGGCGTCTCGAGTC | + |
Preference number: 5 (lower is better) Translates to: GHEGQQNQVVNFILS*PRGRYKRAMVASRV Trigger: GACTCGAGACGCCACCATGGCTCGTTTGTACCGACCTCTCGGGCACGAGAGGATGAAGTTTACCACCTGATTCTGCTGGCCCTCATGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086101.6 |
||
CDS GCA 90 bp | GGTCATGAGGGCCAGCAGAATCAGGTGGTAAACTTCATCCTCTCGTaGCCGAGAGGTCGGTACAAACGAGCCATGGTGGCGTCTCTGTTG | + |
Preference number: 5 (lower is better) Translates to: GHEGQQNQVVNFILS*PRGRYKRAMVASLL Trigger: CAACAGAGACGCCACCATGGCTCGTTTGTACCGACCTCTCGGGCACGAGAGGATGAAGTTTACCACCTGATTCTGCTGGCCCTCATGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS-3UTR CAA 90 bp | GCACACACCTCCACACCCAGCTTACCTCTGCCTGTTTTCTCTTCTCCCGATTCTATGGGGTTGAAGGCGTaGAAGCGGAAGGCGAGGAGG | + |
Preference number: 5 (lower is better) Translates to: AHTSTPSLPLPVFSSPDSMGLKA*KRKARR Trigger: CCTCCTCGCCTTCCGCTTCAACGCCTTCAACCCCAT...AGAATCGGGAGAAGAGAAAACAGGCAGAGGTAAGCTGGGTGTGGAGGTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS CCA 90 bp | TGGACAGAACGGGCACACAGGCAACACAACCAGAACTTGAGGCGTTaGAAGACAGCCTTTCGGAAAAGGATGAAGACCCAGGGGTCCAGG | + |
Preference number: 5 (lower is better) Translates to: WTERAHRQHNQNLRR*KTAFRKRMKTQGSR Trigger: CCTGGACCCCTGGGTCTTCATCCTTTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTGGTTGTGTTGCCTGTGTGCCCGTTCTGTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CAA 90 bp | ATCCTAGGAAGCATGCCTGTGAAGTCCTTTGGAGCCTCTGCATGCTACATCACCGGGTCCAGGATGGGGTaGAAGGCGTTGAAGCGGAAG | + |
Preference number: 5 (lower is better) Translates to: ILGSMPVKSFGASACYITGSRMG*KALKRK Trigger: CTTCCGCTTCAACGCCTTCAACCCCATCCTGGACCC...GGTGATGTAGCATGCAGAGGCTCCAAAGGACTTCACAGGCATGCTTCCTAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CAA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCATGGGGTTGAAGGCGTaGAAGCGGAAGGCGAGGAGG | + |
Preference number: 5 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIMGLKA*KRKARR Trigger: CCTCCTCGCCTTCCGCTTCAACGCCTTCAACCCCAT...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS-3UTR CAA 90 bp | CAGTACCTGAGGACTGACTGGTCAACTCAGACTGGTTTGTTTTGTGGTTTTATCGGGTCCAGGATGGGGTaGAAGGCGTTGAAGCGGAAG | + |
Preference number: 5 (lower is better) Translates to: QYLRTDWSTQTGLFCGFIGSRMG*KALKRK Trigger: CTTCCGCTTCAACGCCTTCAACCCCATCCTGGACCC...GATAAAACCACAAAACAAACCAGTCTGAGTTGACCAGTCAGTCCTCAGGTACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS TCA 72 bp | GCGGCCCGTCCAGCTGGGCGTACAGGTAGGGGTGACTaGGTGCCAGGCACCGCTCCACAGCCATGGCAAAGA | + |
Preference number: 6 (lower is better) Translates to: AARPAGRTGRGD*VPGTAPQPWQR Trigger: TCTTTGCCATGGCTGTGGAGCGGTGCCTGGCACTCAGTCACCCCTACCTGTACGCCCAGCTGGACGGGCCGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS GCA 72 bp | AGGCCGATGGGTGTGACCTCCGTCGGGCACCCAGGATaGCCAATGCCAGCCCGTTGCCCACTACACCAGCCA | + |
Preference number: 6 (lower is better) Translates to: RPMGVTSVGHPG*PMPARCPLHQP Trigger: TGGCTGGTGTAGTGGGCAACGGGCTGGCATTGGGCATCCTGGGTGCCCGACGGAGGTCACACCCATCGGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS TCA 72 bp | CAGCCCAGTGACCAACACCGCAAAGGCCGATGGGTGTaGCCTCCGTCGGGCACCCAGGATGCCCAATGCCAG | + |
Preference number: 6 (lower is better) Translates to: QPSDQHRKGRWV*PPSGTQDAQCQ Trigger: CTGGCATTGGGCATCCTGGGTGCCCGACGGAGGTCACACCCATCGGCCTTTGCGGTGTTGGTCACTGGGCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS TCA 72 bp | AGCACGTGCCCAGCAGATCCGTCACCGCCAGCCCAGTaGCCAACACCGCAAAGGCCGATGGGTGTGACCTCC | + |
Preference number: 6 (lower is better) Translates to: STCPADPSPPAQ*PTPQRPMGVTS Trigger: GGAGGTCACACCCATCGGCCTTTGCGGTGTTGGTCACTGGGCTGGCGGTGACGGATCTGCTGGGCACGTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS GCA 72 bp | TCAGAGGCACAGCAGTCAATGGTGCCACCTGTCCCGTaGCCCAGGACGACAGGGGCACCCAGCTCCCTTCCT | + |
Preference number: 6 (lower is better) Translates to: SEAQQSMVPPVP*PRTTGAPSSLP Trigger: AGGAAGGGAGCTGGGTGCCCCTGTCGTCCTGGGGCACGGGACAGGTGGCACCATTGACTGCTGTGCCTCTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS GCA 72 bp | TCCGTCGGGCACCCAGGATGCCCAATGCCAGCCCGTTaGCCACTACACCAGCCACGAACATCAGCGTGCTGG | + |
Preference number: 6 (lower is better) Translates to: SVGHPGCPMPAR*PLHQPRTSACW Trigger: CCAGCACGCTGATGTTCGTGGCTGGTGTAGTGGGCAACGGGCTGGCATTGGGCATCCTGGGTGCCCGACGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CCA 72 bp | GGGGCAGTGAGCAGAAGAGGCAGCAGAAAGCGTAGATaGAAGGCAAGGCAAAGCGGGCGCAGCGCGGCCCGT | + |
Preference number: 6 (lower is better) Translates to: GAVSRRGSRKRR*KARQSGRSAAR Trigger: ACGGGCCGCGCTGCGCCCGCTTTGCCTTGCCTTCCATCTACGCTTTCTGCTGCCTCTTCTGCTCACTGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS TCA 72 bp | GTGCCAGGCACCGCTCCACAGCCATGGCAAAGAGGATaGGCGTGGAGGCCAGGCCGAAGAACGTCATGGCGA | + |
Preference number: 6 (lower is better) Translates to: VPGTAPQPWQRG*AWRPGRRTSWR Trigger: TCGCCATGACGTTCTTCGGCCTGGCCTCCACGCTCATCCTCTTTGCCATGGCTGTGGAGCGGTGCCTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS GCA 72 bp | CCCGTCCAGCTGGGCGTACAGGTAGGGGTGACTGAGTaGCAGGCACCGCTCCACAGCCATGGCAAAGAGGAT | + |
Preference number: 6 (lower is better) Translates to: PVQLGVQVGVTE*QAPLHSHGKED Trigger: ATCCTCTTTGCCATGGCTGTGGAGCGGTGCCTGGCACTCAGTCACCCCTACCTGTACGCCCAGCTGGACGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CCA 72 bp | GCGGAAGGCGAGGAGGTCCCCCATCTCTCTGCTGTCTaGGGCGATGGCCTGAGTGAAGCCTCGGATCATGAG | + |
Preference number: 6 (lower is better) Translates to: AEGEEVPHLSAV*GDGLSEASDHE Trigger: CTCATGATCCGAGGCTTCACTCAGGCCATCGCCCCAGACAGCAGAGAGATGGGGGACCTCCTCGCCTTCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS CCA 72 bp | CAGGACGACAGGGGCACCCAGCTCCCTTCCTTAGCCTaGAGAGAAGTAGGAGCCGGTGGGTCTCTTCTCCCC | + |
Preference number: 6 (lower is better) Translates to: QDDRGTQLPSLA*REVGAGGSLLP Trigger: GGGGAGAAGAGACCCACCGGCTCCTACTTCTCTCCAGGCTAAGGAAGGGAGCTGGGTGCCCCTGTCGTCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS GCA 72 bp | GCCCGTTGCCCACTACACCAGCCACGAACATCAGCGTaGTGGTGGCAGGTCCTACCGAGTCTTGAACGTAGG | + |
Preference number: 6 (lower is better) Translates to: ARCPLHQPRTSA*WWQVLPSLERR Trigger: CCTACGTTCAAGACTCGGTAGGACCTGCCACCAGCACGCTGATGTTCGTGGCTGGTGTAGTGGGCAACGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CCA 72 bp | GCTCCCTTCCTTAGCCTGGAGAGAAGTAGGAGCCGGTaGGTCTCTTCTCCCCGATGCAGGTCTGGAAAGGGG | + |
Preference number: 6 (lower is better) Translates to: APFLSLERSRSR*VSSPRCRSGKG Trigger: CCCCTTTCCAGACCTGCATCGGGGAGAAGAGACCCACCGGCTCCTACTTCTCTCCAGGCTAAGGAAGGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS CAA 90 bp | ACCAGCCACGAACATCAGCGTGCTGGTGGCAGGTCCTACCGAGTCTaGAACGTAGGTGATATTCCAGCAGGAGCCTGCCATGCCCTGCCA | + |
Preference number: 6 (lower is better) Translates to: TSHEHQRAGGRSYRV*NVGDIPAGACHALP Trigger: TGGCAGGGCATGGCAGGCTCCTGCTGGAATATCACCTACGTTCAAGACTCGGTAGGACCTGCCACCAGCACGCTGATGTTCGTGGCTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CAA 90 bp | TCGTGCCCGAGAGGTCGGTACAAACGAGCCATGGTGGCGTCTCTGTaGGCGGTACATGTGATAGAGGCTGAGAGTGACGGAGCCGTTGCA | + |
Preference number: 6 (lower is better) Translates to: SCPRGRYKRAMVASL*AVHVIEAESDGAVA Trigger: TGCAACGGCTCCGTCACTCTCAGCCTCTATCACATGTACCGCCAACAGAGACGCCACCATGGCTCGTTTGTACCGACCTCTCGGGCACGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS TCA 72 bp | ACGAGCCATGGTGGCGTCTCGAGTCTTGAACGTAGGTaGTATTCCAGCAGGAGCCTGCCATGCCCTGCCACT | + |
Preference number: 6 (lower is better) Translates to: TSHGGVSSLERR*YSSRSLPCPAT Trigger: AGTGGCAGGGCATGGCAGGCTCCTGCTGGAATATCACCTACGTTCAAGACTCGAGACGCCACCATGGCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086101.6 |
||
CDS TCA 72 bp | TGCTGGTGGCAGGTCCTACCGAGTCTTGAACGTAGGTaGTATTCCAGCAGGAGCCTGCCATGCCCTGCCACT | + |
Preference number: 6 (lower is better) Translates to: CWWQVLPSLERR*YSSRSLPCPAT Trigger: AGTGGCAGGGCATGGCAGGCTCCTGCTGGAATATCACCTACGTTCAAGACTCGGTAGGACCTGCCACCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS GCA 72 bp | CAGCAGAGAGCTGTTTCGAGCATAGGCCACAAACACTaGAGGGCTCAAGAAGCACGTGCCCAGCAGATCCGT | + |
Preference number: 6 (lower is better) Translates to: QQRAVSSIGHKH*RAQEARAQQIR Trigger: ACGGATCTGCTGGGCACGTGCTTCTTGAGCCCTGCAGTGTTTGTGGCCTATGCTCGAAACAGCTCTCTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CAA 72 bp | GGTCGGTACAAACGAGCCATGGTGGCGTCTCGAGTCTaGAACGTAGGTGATATTCCAGCAGGAGCCTGCCAT | + |
Preference number: 6 (lower is better) Translates to: GRYKRAMVASRV*NVGDIPAGACH Trigger: ATGGCAGGCTCCTGCTGGAATATCACCTACGTTCAAGACTCGAGACGCCACCATGGCTCGTTTGTACCGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086101.6 |
||
CDS CAA 72 bp | GAACATCAGCGTGCTGGTGGCAGGTCCTACCGAGTCTaGAACGTAGGTGATATTCCAGCAGGAGCCTGCCAT | + |
Preference number: 6 (lower is better) Translates to: EHQRAGGRSYRV*NVGDIPAGACH Trigger: ATGGCAGGCTCCTGCTGGAATATCACCTACGTTCAAGACTCGGTAGGACCTGCCACCAGCACGCTGATGTTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CAA 72 bp | AGAGGTCGGTACAAACGAGCCATGGTGGCGTCTCTGTaGGCGGTACATGTGATAGAGGCTGAGAGTGACGGA | + |
Preference number: 6 (lower is better) Translates to: RGRYKRAMVASL*AVHVIEAESDG Trigger: TCCGTCACTCTCAGCCTCTATCACATGTACCGCCAACAGAGACGCCACCATGGCTCGTTTGTACCGACCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144408.2 |
||
CDS CAA 90 bp | ATGGACAGAACGGGCACACAGGCAACACAACCAGAACTTGAGGCGTaGGAAGACAGCCTTTCGGAAAAGGATGAAGACCCAGGGGTCCAG | + |
Preference number: 6 (lower is better) Translates to: MDRTGTQATQPELEA*EDSLSEKDEDPGVQ Trigger: CTGGACCCCTGGGTCTTCATCCTTTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTGGTTGTGTTGCCTGTGTGCCCGTTCTGTCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS CCA 72 bp | CGGGCACACAGGCAACACAACCAGAACTTGAGGCGTTaGAAGACAGCCTTTCGGAAAAGGATGAAGACCCAG | + |
Preference number: 6 (lower is better) Translates to: RAHRQHNQNLRR*KTAFRKRMKTQ Trigger: CTGGGTCTTCATCCTTTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTGGTTGTGTTGCCTGTGTGCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS CAA 72 bp | ACGGGCACACAGGCAACACAACCAGAACTTGAGGCGTaGGAAGACAGCCTTTCGGAAAAGGATGAAGACCCA | + |
Preference number: 6 (lower is better) Translates to: TGTQATQPELEA*EDSLSEKDEDP Trigger: TGGGTCTTCATCCTTTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTGGTTGTGTTGCCTGTGTGCCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS CAA 72 bp | TGGACAGAACGGGCACACAGGCAACACAACCAGAACTaGAGGCGTTGGAAGACAGCCTTTCGGAAAAGGATG | + |
Preference number: 6 (lower is better) Translates to: WTERAHRQHNQN*RRWKTAFRKRM Trigger: CATCCTTTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTGGTTGTGTTGCCTGTGTGCCCGTTCTGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |
||
CDS CAA 90 bp | AAATCCCCATGGACAGAACGGGCACACAGGCAACACAACCAGAACTaGAGGCGTTGGAAGACAGCCTTTCGGAAAAGGATGAAGACCCAG | + |
Preference number: 6 (lower is better) Translates to: KSPWTERAHRQHNQN*RRWKTAFRKRMKTQ Trigger: CTGGGTCTTCATCCTTTTCCGAAAGGCTGTCTTCCAACGCCTCAAGTTCTGGTTGTGTTGCCTGTGTGCCCGTTCTGTCCATGGGGATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086101.6 ENSMUST00000144408.2 |