Pregenerated sensors for PTGFR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028036Ensembl transcript IDs: ENSMUST00000029670.7, ENSMUST00000106126.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCAAAGTCACCGTGAGTCTCAGATGTCATGGTCATGCAGATATTaGTTGAGGACACATGGACTGGTAAACAGAGCAGAACCGCACACG | + |
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Preference number: 1 (lower is better) Translates to: HQSHRESQMSWSCRY*LRTHGLVNRAEPHT Trigger: CGTGTGCGGTTCTGCTCTGTTTACCAGTCCATGTGTCCTCAATCAATATCTGCATGACCATGACATCTGAGACTCACGGTGACTTTGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 90 bp | GTTGTGACAAGAATGATTATCCTCATCAGCCTCACAATATCAGGCTaGCCAACCTACACAGTGGCCATCAAAGTCACCGTGAGTCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: VVTRMIILISLTISG*PTYTVAIKVTVSLR Trigger: TCTGAGACTCACGGTGACTTTGATGGCCACTGTGTAGGTTGGCCAGCCTGATATTGTGAGGCTGATGAGGATAATCATTCTTGTCACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 90 bp | CACAACCATGCAGCAGTCAGCTTAACAAAAGTCAGAAGGTGTGTCTaGCCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGT | + |
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Preference number: 1 (lower is better) Translates to: HNHAAVSLTKVRRCV*PVFSQTTQRSKCSS Trigger: ACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTCTGACTTTTGTTAAGCTGACTGCTGCATGGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| 3UTR GCA 90 bp | GCTCTTCTGGATTCTTCCCATTCTTTGGTTCACTCTGTCTTCACCTaGACCCATCTTGTTCTCTCTGCAGCTGATCTATGTAAAACTGTC | + |
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Preference number: 1 (lower is better) Translates to: ALLDSSHSLVHSVFT*THLVLSAADLCKTV Trigger: GACAGTTTTACATAGATCAGCTGCAGAGAGAACAAGATGGGTGCAGGTGAAGACAGAGTGAACCAAAGAATGGGAAGAATCCAGAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 90 bp | GCACTTCCCAGAGCTTTGCCTTCGTCACAGGTTGATGTTAAAAGATaGTCTCATTGTAGACATCACAGCAGTAGAGGAACAATTGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: ALPRALPSSQVDVKR*SHCRHHSSRGTIVS Trigger: GGACACAATTGTTCCTCTACTGCTGTGATGTCTACAATGAGACCATCTTTTAACATCAACCTGTGACGAAGGCAAAGCTCTGGGAAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 90 bp | CAGTCTTTATATTCTGACCATAGAAAACAGTTCATTTGTAGCCCTTaGTGGCACACAATGAAGCAGGCAAGCAACTGTCCACCCTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: QSLYSDHRKQFICSP*WHTMKQASNCPPCL Trigger: GAGACAGGGTGGACAGTTGCTTGCCTGCTTCATTGTGTGCCACCAAGGGCTACAAATGAACTGTTTTCTATGGTCAGAATATAAAGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 90 bp | TCTTCCAAACTAACCGATTCAATCTGGCTTCTCTCCACTTCTGCCTaGTTGCTTGCTTGGCCTCATACTAACTTTGTCAATAAGCTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SSKLTDSIWLLSTSA*LLAWPHTNFVNKLC Trigger: GCAGAGCTTATTGACAAAGTTAGTATGAGGCCAAGCAAGCAATCAGGCAGAAGTGGAGAGAAGCCAGATTGAATCGGTTAGTTTGGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 90 bp | CTACTCTGCTCCTCAGTATCCTCTCTTTCCTGTGCTATTCCCATGTaGGTTAGGCATATCCTTTCTCTAACTCATTCGGTCAAAACTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLCSSVSSLSCAIPM*VRHILSLTHSVKTF Trigger: GAAAGTTTTGACCGAATGAGTTAGAGAAAGGATATGCCTAACTCACATGGGAATAGCACAGGAAAGAGAGGATACTGAGGAGCAGAGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 90 bp | TCTTTATATTCTGACCATAGAAAACAGTTCATTTGTAGCCCTTGGTaGCACACAATGAAGCAGGCAAGCAACTGTCCACCCTGTCTCATT | + |
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Preference number: 1 (lower is better) Translates to: SLYSDHRKQFICSPW*HTMKQASNCPPCLI Trigger: AATGAGACAGGGTGGACAGTTGCTTGCCTGCTTCATTGTGTGCCACCAAGGGCTACAAATGAACTGTTTTCTATGGTCAGAATATAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 90 bp | CCAGCCGGATCTTATAGACCTAGAAGGTCTTTGGATGTGATCTCTTaGCAGAGAAATCATGTTGAAGATACTATTTTAAGTCTATTGAAT | + |
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Preference number: 1 (lower is better) Translates to: PAGSYRPRRSLDVIS*QRNHVEDTILSLLN Trigger: ATTCAATAGACTTAAAATAGTATCTTCAACATGATTTCTCTGTCAAGAGATCACATCCAAAGACCTTCTAGGTCTATAAGATCCGGCTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 90 bp | TACAACTCCGTGCTCAAGTTACACCAAAAATCATTGTCTATTCTCTaGTATATTCTCTACATAGGAATCAGTTGTGCGATTGATCACTTG | + |
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Preference number: 1 (lower is better) Translates to: YNSVLKLHQKSLSIL*YILYIGISCAIDHL Trigger: CAAGTGATCAATCGCACAACTGATTCCTATGTAGAGAATATATCAGAGAATAGACAATGATTTTTGGTGTAACTTGAGCACGGAGTTGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR GCA 90 bp | ATTGAATTCACATGGTTTCGGGATGATGCACATGATGCACAGAAATaGATTCAGGTAAAACATCCATACACACTGCAAAAACTAGTAATA | + |
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Preference number: 1 (lower is better) Translates to: IEFTWFRDDAHDAQK*IQVKHPYTLQKLVI Trigger: TATTACTAGTTTTTGCAGTGTGTATGGATGTTTTACCTGAATGCATTTCTGTGCATCATGTGCATCATCCCGAAACCATGTGAATTCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR CCA 90 bp | TTCTTACTAGAAAGGAGCCACAGGCAAGGGACACAGTTTTGTGAGGATCACGGCCACAATAAAGAGCCCTaGAGCCTCGAAACAAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: FLLERSHRQGTQFCEDHGHNKEP*SLETSP Trigger: GGGACTTGTTTCGAGGCTCCAGGGCTCTTTATTGTG...GCCGTGATCCTCACAAAACTGTGTCCCTTGCCTGTGGCTCCTTTCTAGTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR CCA 90 bp | TTCTTACTAGAAAGGAGCCACAGGCAAGGGACACAGTTTTGTGAGGATCACGGCTTGATTGAGGACACATaGACTGGTAAACAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: FLLERSHRQGTQFCEDHGLIEDT*TGKQSR Trigger: TCTGCTCTGTTTACCAGTCCATGTGTCCTCAATCAA...GCCGTGATCCTCACAAAACTGTGTCCCTTGCCTGTGGCTCCTTTCTAGTAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CAA 90 bp | ATTCTTCCCATTCTTTGGTTCACTCTGTCTTCACCTGCACCCATCTaGTTCTCTCTGCAGCTGATCTATGTAAAACTGTCCTGGGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: ILPILWFTLSSPAPI*FSLQLIYVKLSWEN Trigger: GTTTTCCCAGGACAGTTTTACATAGATCAGCTGCAGAGAGAACAAGATGGGTGCAGGTGAAGACAGAGTGAACCAAAGAATGGGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CAA 90 bp | TTAAAAGATGGTCTCATTGTAGACATCACAGCAGTAGAGGAACAATaGTGTCCATATCAGAGGCTCACAATAAAGAGCCCTGGAGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: LKDGLIVDITAVEEQ*CPYQRLTIKSPGAS Trigger: CGAGGCTCCAGGGCTCTTTATTGTGAGCCTCTGATATGGACACAATTGTTCCTCTACTGCTGTGATGTCTACAATGAGACCATCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTTACTAGAAAGGAGCCACAGGCAAGGGACACAGTTTTGTGAGGATCACGGCGACACTGAAAACCTATaGCTTTATAGGAGGATAACA | + |
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Preference number: 2 (lower is better) Translates to: FLLERSHRQGTQFCEDHGDTENL*LYRRIT Trigger: TGTTATCCTCCTATAAAGTCATAGGTTTTCAGTGTC...GCCGTGATCCTCACAAAACTGTGTCCCTTGCCTGTGGCTCCTTTCTAGTAAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGCTTTGCCTTCGTCACAGGTTGATGTTAAAAGATGGTCTCATTGTAGACATTCATCACTCCATCTaGCCCTCAATTGGACATTGC | + |
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Preference number: 2 (lower is better) Translates to: PELCLRHRLMLKDGLIVDIHHSI*PSIGHC Trigger: GCAATGTCCAATTGAGGGGCAGATGGAGTGATGAAT...GTCTACAATGAGACCATCTTTTAACATCAACCTGTGACGAAGGCAAAGCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR TCA 90 bp | CAAAAGTCAGAAGGTGTGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCATTTCAGAAGTTTCCGTaGCTTTCTTCTAATACTGCA | + |
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Preference number: 2 (lower is better) Translates to: QKSEGVSDQCSPKLHRGPFQKFP*LSSNTA Trigger: TGCAGTATTAGAAGAAAGTCACGGAAACTTCTGAAA...TGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTCTGACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTCTCTGATTCATCACTCCATCTGCCCCTCAATTGGACATTGCTTTCAAAAGCATGATAGGCTGTCATaGGCTGAATCTGTGCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: LSLIHHSICPSIGHCFQKHDRLS*AESVLR Trigger: TCTTAGCACAGATTCAGCTCATGACAGCCTATCATG...CTTTTGAAAGCAATGTCCAATTGAGGGGCAGATGGAGTGATGAATCAGAGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTAATTCATGTTTGAGTCCTCTGAGCCCAGTGACCAAATTTCTTACTAGAGAAGGTCTTTGGATGTaGTCTCTTGACAGAGAAATC | + |
|
Preference number: 2 (lower is better) Translates to: VANSCLSPLSPVTKFLTREGLWM*SLDREI Trigger: GATTTCTCTGTCAAGAGATCACATCCAAAGACCTTC...TCTAGTAAGAAATTTGGTCACTGGGCTCAGAGGACTCAAACATGAATTAGCCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR TCA 90 bp | CTTTATATTCTGACCATAGAAAACAGTTCATTTGTAGCCCTTGGTGGCACACAAATGAGTCGGATCAACTaGGATGTTTCAGAAGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LYILTIENSSFVALGGTQMSRIN*DVSEVS Trigger: GGAAACTTCTGAAACATCTCAGTTGATCCGACTCAT...TTGTGTGCCACCAAGGGCTACAAATGAACTGTTTTCTATGGTCAGAATATAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR TCA 90 bp | CAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACATTGTATCTGTCTAATGAGTCGGATCAACTaGGATGTTTCAGAAGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: QIKLKCVFYSRTPHCICLMSRIN*DVSEVS Trigger: GGAAACTTCTGAAACATCTCAGTTGATCCGACTCAT...TAGACAGATACAATGTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| 3UTR CAA 90 bp | GTTAACTGCAGAGTTTTACCAACTATAATTAGGGAAGACAGAGACTaGGTTCTTCATGCCTCTGTTTTTAAGATGCCAACATCTTATTTC | + |
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Preference number: 2 (lower is better) Translates to: VNCRVLPTIIREDRD*VLHASVFKMPTSYF Trigger: GAAATAAGATGTTGGCATCTTAAAAACAGAGGCATGAAGAACCAAGTCTCTGTCTTCCCTAATTATAGTTGGTAAAACTCTGCAGTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR CCA 90 bp | CTTTATATTCTGACCATAGAAAACAGTTCATTTGTAGCCCTTGGTGGCACACAAAGGCTTTTGGAAGTGTaGTTCAACTTATTTAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: LYILTIENSSFVALGGTQRLLEV*FNLFSE Trigger: TTCACTAAATAAGTTGAACCACACTTCCAAAAGCCT...TTGTGTGCCACCAAGGGCTACAAATGAACTGTTTTCTATGGTCAGAATATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CAA 90 bp | CCAATAACAAACAGAAATGAAAATTCTCCTTCAAGAGTCCCACATTaGTATGACTTTCTAAAGCTAACCTCTCATGGTAAGTACTCATCT | + |
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Preference number: 2 (lower is better) Translates to: PITNRNENSPSRVPH*YDFLKLTSHGKYSS Trigger: AGATGAGTACTTACCATGAGAGGTTAGCTTTAGAAAGTCATACAAATGTGGGACTCTTGAAGGAGAATTTTCATTTCTGTTTGTTATTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR TCA 90 bp | CAATTGAAATGTGTCAGGAATGACTTGAAATCCAACACTATTTACCAAGTGGTATTTCAGAAGTTTCCGTaGCTTTCTTCTAATACTGCA | + |
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Preference number: 2 (lower is better) Translates to: QLKCVRNDLKSNTIYQVVFQKFP*LSSNTA Trigger: TGCAGTATTAGAAGAAAGTCACGGAAACTTCTGAAA...TACCACTTGGTAAATAGTGTTGGATTTCAAGTCATTCCTGACACATTTCAATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | GAAAACAGTTCATTTGTAGCCCTTGGTGGCACACAATaGAGCAGGCAAGCAACTGTCCACCCTGTCTCATTC | + |
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Preference number: 3 (lower is better) Translates to: ENSSFVALGGTQ*SRQATVHPVSF Trigger: GAATGAGACAGGGTGGACAGTTGCTTGCCTGCTTCATTGTGTGCCACCAAGGGCTACAAATGAACTGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR GCA 72 bp | CCCCATCCTTACCTGTCCCCTTTGAGATCAGACCACTaGAATACTTACTTTATCGGGAGATGGGTGAGTGAA | + |
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Preference number: 3 (lower is better) Translates to: PHPYLSPLRSDH*NTYFIGRWVSE Trigger: TTCACTCACCCATCTCCCGATAAAGTAAGTATTGCAGTGGTCTGATCTCAAAGGGGACAGGTAAGGATGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 72 bp | AGAATGATTATCCTCATCAGCCTCACAATATCAGGCTaGCCAACCTACACAGTGGCCATCAAAGTCACCGTG | + |
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Preference number: 3 (lower is better) Translates to: RMIILISLTISG*PTYTVAIKVTV Trigger: CACGGTGACTTTGATGGCCACTGTGTAGGTTGGCCAGCCTGATATTGTGAGGCTGATGAGGATAATCATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 72 bp | ATTGTGTCCATATCAGAGGCTCACAATAAAGAGCCCTaGAGCCTCGAAACAAGTCCCTTCTCAGTGCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: IVSISEAHNKEP*SLETSPFSVPF Trigger: GAAAGGCACTGAGAAGGGACTTGTTTCGAGGCTCCAGGGCTCTTTATTGTGAGCCTCTGATATGGACACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 72 bp | TCTGACCATAGAAAACAGTTCATTTGTAGCCCTTGGTaGCACACAATGAAGCAGGCAAGCAACTGTCCACCC | + |
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Preference number: 3 (lower is better) Translates to: SDHRKQFICSPW*HTMKQASNCPP Trigger: GGGTGGACAGTTGCTTGCCTGCTTCATTGTGTGCCACCAAGGGCTACAAATGAACTGTTTTCTATGGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR CAA 90 bp | TTCTTACTAGAAAGGAGCCACAGGCAAGGGACACAGTTTTGTGAGGATCACGGCAAGAACGGCAGCTGCTaGAAAATGGTGCTCTCATTT | + |
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Preference number: 3 (lower is better) Translates to: FLLERSHRQGTQFCEDHGKNGSC*KMVLSF Trigger: AAATGAGAGCACCATTTTCAAGCAGCTGCCGTTCTT...GCCGTGATCCTCACAAAACTGTGTCCCTTGCCTGTGGCTCCTTTCTAGTAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | GCAGCAGTCAGCTTAACAAAAGTCAGAAGGTGTGTCTaGCCAGTGTTCTCCCAAACTACACAGAGGTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: AAVSLTKVRRCV*PVFSQTTQRSK Trigger: TTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTCTGACTTTTGTTAAGCTGACTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| 3UTR CCA 72 bp | GATGTCATGGTCATGCAGATATTGATTGAGGACACATaGACTGGTAAACAGAGCAGAACCGCACACGCAAAC | + |
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Preference number: 3 (lower is better) Translates to: DVMVMQILIEDT*TGKQSRTAHAN Trigger: GTTTGCGTGTGCGGTTCTGCTCTGTTTACCAGTCCATGTGTCCTCAATCAATATCTGCATGACCATGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | CACCGTGAGTCTCAGATGTCATGGTCATGCAGATATTaGTTGAGGACACATGGACTGGTAAACAGAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: HRESQMSWSCRY*LRTHGLVNRAE Trigger: TTCTGCTCTGTTTACCAGTCCATGTGTCCTCAATCAATATCTGCATGACCATGACATCTGAGACTCACGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | GTGTTGAAATCATTGGTGCTGCCTACCTGTCGTTTCTaGGTTCTGGAGTATTTTACCCCATCCTTACCTGTC | + |
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Preference number: 3 (lower is better) Translates to: VLKSLVLPTCRF*VLEYFTPSLPV Trigger: GACAGGTAAGGATGGGGTAAAATACTCCAGAACTCAGAAACGACAGGTAGGCAGCACCAATGATTTCAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR GCA 72 bp | CCGATTCAATCTGGCTTCTCTCCACTTCTGCCTGATTaGTTGCTTGGCCTCATACTAACTTTGTCAATAAGC | + |
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Preference number: 3 (lower is better) Translates to: PIQSGFSPLLPD*LLGLILTLSIS Trigger: GCTTATTGACAAAGTTAGTATGAGGCCAAGCAAGCAATCAGGCAGAAGTGGAGAGAAGCCAGATTGAATCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR CCA 72 bp | AGATCAGACCACTGCAATACTTACTTTATCGGGAGATaGGTGAGTGAAGATCATCCCTCCAATCAAGGCCTT | + |
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Preference number: 3 (lower is better) Translates to: RSDHCNTYFIGR*VSEDHPSNQGL Trigger: AAGGCCTTGATTGGAGGGATGATCTTCACTCACCCATCTCCCGATAAAGTAAGTATTGCAGTGGTCTGATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR-3UTR CAA 90 bp | GTGGCTAATTCATGTTTGAGTCCTCTGAGCCCAGTGACCAAATTTCTTACTAGACTTCTGCCTGATTGCTaGCTTGGCCTCATACTAACT | + |
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Preference number: 3 (lower is better) Translates to: VANSCLSPLSPVTKFLTRLLPDC*LGLILT Trigger: AGTTAGTATGAGGCCAAGCAAGCAATCAGGCAGAAG...TCTAGTAAGAAATTTGGTCACTGGGCTCAGAGGACTCAAACATGAATTAGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | TCCTCAGTATCCTCTCTTTCCTGTGCTATTCCCATGTaGGTTAGGCATATCCTTTCTCTAACTCATTCGGTC | + |
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Preference number: 3 (lower is better) Translates to: SSVSSLSCAIPM*VRHILSLTHSV Trigger: GACCGAATGAGTTAGAGAAAGGATATGCCTAACTCACATGGGAATAGCACAGGAAAGAGAGGATACTGAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | CTAACCGATTCAATCTGGCTTCTCTCCACTTCTGCCTaGTTGCTTGCTTGGCCTCATACTAACTTTGTCAAT | + |
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Preference number: 3 (lower is better) Translates to: LTDSIWLLSTSA*LLAWPHTNFVN Trigger: ATTGACAAAGTTAGTATGAGGCCAAGCAAGCAATCAGGCAGAAGTGGAGAGAAGCCAGATTGAATCGGTTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | GTCCCTACACCACCAGATTTTAGAATCAGTGAAATCTaGACTGTGGTGTGCCTAGGGAAAGTGAAGTTCAGA | + |
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Preference number: 3 (lower is better) Translates to: VPTPPDFRISEI*TVVCLGKVKFR Trigger: TCTGAACTTCACTTTCCCTAGGCACACCACAGTTCAGATTTCACTGATTCTAAAATCTGGTGGTGTAGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | AACTCCTGGCTAATTCTAGATCTTTCCACTCCTCACTaGCAACACAGGCTTTTGGAAGTGTGGTTCAACTTA | + |
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Preference number: 3 (lower is better) Translates to: NSWLILDLSTPH*QHRLLEVWFNL Trigger: TAAGTTGAACCACACTTCCAAAAGCCTGTGTTGTCAGTGAGGAGTGGAAAGATCTAGAATTAGCCAGGAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | TGCAATTCTCCAAAGGCCCAATGTTTCCATAGACTGTaGAGCTGTGCAGACAACAGTTTACCTCATACAACA | + |
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Preference number: 3 (lower is better) Translates to: CNSPKAQCFHRL*SCADNSLPHTT Trigger: TGTTGTATGAGGTAAACTGTTGTCTGCACAGCTTCACAGTCTATGGAAACATTGGGCCTTTGGAGAATTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR GCA 72 bp | CTTGCTTGGCCTCATACTAACTTTGTCAATAAGCTCTaGTCTTCTGGATTCTTCCCATTCTTTGGTTCACTC | + |
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Preference number: 3 (lower is better) Translates to: LAWPHTNFVNKL*SSGFFPFFGSL Trigger: GAGTGAACCAAAGAATGGGAAGAATCCAGAAGAGCAGAGCTTATTGACAAAGTTAGTATGAGGCCAAGCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| 3UTR TCA 72 bp | CTCAAGGACACCACATTGTATCTGTCTATCTCCTGTTaGCACAAACAAATGAAATACACAACCATGCAGCAG | + |
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Preference number: 3 (lower is better) Translates to: LKDTTLYLSISC*HKQMKYTTMQQ Trigger: CTGCTGCATGGTTGTGTATTTCATTTGTTTGTGTCAACAGGAGATAGACAGATACAATGTGGTGTCCTTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| 3UTR GCA 72 bp | AACAAGTCCCTTCTCAGTGCCTTTCCTCAGTTGAAATaGATGGTCATGTTAACTGCAGAGTTTTACCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: NKSLLSAFPQLK*MVMLTAEFYQL Trigger: TAGTTGGTAAAACTCTGCAGTTAACATGACCATGCATTTCAACTGAGGAAAGGCACTGAGAAGGGACTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CCA 72 bp | ACTTTCTCTGATTCATCACTCCATCTGCCCCTCAATTaGACATTGCTTTCAAAAGTGACTACTTCCTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: TFSDSSLHLPLN*TLLSKVTTSFY Trigger: GTAGAAGGAAGTAGTCACTTTTGAAAGCAATGTCCAATTGAGGGGCAGATGGAGTGATGAATCAGAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR TCA 72 bp | CAGCCGGATCTTATAGACCTAGAAGGTCTTTGGATGTaGTCTCTTGACAGAGAAATCATGTTGAAGATACTA | + |
|
Preference number: 3 (lower is better) Translates to: QPDLIDLEGLWM*SLDREIMLKIL Trigger: TAGTATCTTCAACATGATTTCTCTGTCAAGAGATCACATCCAAAGACCTTCTAGGTCTATAAGATCCGGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR TCA 72 bp | TATCCTTTCTCTAACTCATTCGGTCAAAACTTTCTCTaGTTCATCACTCCATCTGCCCCTCAATTGGACATT | + |
|
Preference number: 3 (lower is better) Translates to: YPFSNSFGQNFL*FITPSAPQLDI Trigger: AATGTCCAATTGAGGGGCAGATGGAGTGATGAATCAGAGAAAGTTTTGACCGAATGAGTTAGAGAAAGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR TCA 72 bp | AATGGTGCTCTCATTTCCTCAGACAAAGAGATGAGATaGAAGCCATACTCTAGCTGTGTAAATACACAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NGALISSDKEMR*KPYSSCVNTQL Trigger: AAGCTGTGTATTTACACAGCTAGAGTATGGCTTTCATCTCATCTCTTTGTCTGAGGAAATGAGAGCACCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR GCA 72 bp | ACATGGTTTCGGGATGATGCACATGATGCACAGAAATaGATTCAGGTAAAACATCCATACACACTGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TWFRDDAHDAQK*IQVKHPYTLQK Trigger: TTTTTGCAGTGTGTATGGATGTTTTACCTGAATGCATTTCTGTGCATCATGTGCATCATCCCGAAACCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR GCA 72 bp | AAACCAGCATGTAGCTGTCAGCTTAAATTTAAATTGTaGATGCTCTTTACAACTCCGTGCTCAAGTTACACC | + |
|
Preference number: 3 (lower is better) Translates to: KPACSCQLKFKL*MLFTTPCSSYT Trigger: GGTGTAACTTGAGCACGGAGTTGTAAAGAGCATGCACAATTTAAATTTAAGCTGACAGCTACATGCTGGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR TCA 72 bp | ACATTCACTTCCTCTCCAATTGAAATGTGTCAGGAATaGCTTGAAATCCAACACTATTTACCAAGTGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: TFTSSPIEMCQE*LEIQHYLPSGK Trigger: TTTACCACTTGGTAAATAGTGTTGGATTTCAAGTCATTCCTGACACATTTCAATTGGAGAGGAAGTGAATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR TCA 72 bp | GTGCTCAAGTTACACCAAAAATCATTGTCTATTCTCTaGTATATTCTCTACATAGGAATCAGTTGTGCGATT | + |
|
Preference number: 3 (lower is better) Translates to: VLKLHQKSLSIL*YILYIGISCAI Trigger: AATCGCACAACTGATTCCTATGTAGAGAATATATCAGAGAATAGACAATGATTTTTGGTGTAACTTGAGCAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR TCA 72 bp | GAAATCCAACACTATTTACCAAGTGGTAAATTCTTCTaGCAACCAGGTGAAGAATTCAGAAAATGTACAGTT | + |
|
Preference number: 3 (lower is better) Translates to: EIQHYLPSGKFF*QPGEEFRKCTV Trigger: AACTGTACATTTTCTGAATTCTTCACCTGGTTGTCAGAAGAATTTACCACTTGGTAAATAGTGTTGGATTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR CCA 90 bp | CCTCACAATATCAGGCTGGCCAACCTACACAGTGGCCATCAAAGTCACCGTGAGCTCGGTGTCCAAGGATaGGCAGCACAGCCACGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PHNIRLANLHSGHQSHRELGVQG*AAQPRT Trigger: TGTTCGTGGCTGTGCTGCCCATCCTTGGACACCGAG...CTCACGGTGACTTTGATGGCCACTGTGTAGGTTGGCCAGCCTGATATTGTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR CCA 90 bp | GAAGGTGTGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCACTCGGTGTCCAAGGATaGGCAGCACAGCCACGAACA | + |
|
Preference number: 4 (lower is better) Translates to: EGVSDQCSPKLHRGPNVPLGVQG*AAQPRT Trigger: TGTTCGTGGCTGTGCTGCCCATCCTTGGACACCGAG...TGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGATTCTGGTAGGCCTTCATaGGAATGGCGATGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLPNYTEVQMFQLHDESDSGRPS*EWRWPG Trigger: GCCTGGCCATCGCCATTCTCATGAAGGCCTACCAGA...ATCCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | GAAGGTGTGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCACTGGCAGGTTGTGTTTaGGATGAGTCCAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EGVSDQCSPKLHRGPNVPLAGCV*DESSCR Trigger: CCTGCAGCTGGACTCATCGCAAACACAACCTGCCAG...TGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGAGCCGGTTCTCCGTCTaGCAGGTTGTGTTTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: VFSQTTQRSKCSSYTMSRSRFSV*QVVFAM Trigger: CATCGCAAACACAACCTGCCAGACGGAGAACCGGCT...CCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCTTTGCCTTCGTCACAGGTTGATGTTAAAAGATGGTCTCATTGTAGACTCTGGTAGGCCTTCATaGGAATGGCGATGGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PELCLRHRLMLKDGLIVDSGRPS*EWRWPG Trigger: GCCTGGCCATCGCCATTCTCATGAAGGCCTACCAGA...GTCTACAATGAGACCATCTTTTAACATCAACCTGTGACGAAGGCAAAGCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR TCA 90 bp | GTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGATTGGCCAGGAGCTGAATaGTCATCTCCAGGTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPNYTEVQMFQLHDESDWPGAE*SSPGGE Trigger: CTCACCACCTGGAGATGATCATTCAGCTCCTGGCCA...ATCCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTACTAGAAAGGAGCCACAGGCAAGGGACACAGTTTTGTGAGGATCACGGCATTATGGCCAGGAGCTaGATGATCATCTCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLERSHRQGTQFCEDHGIMARS*MIISRW Trigger: CCACCTGGAGATGATCATTCAGCTCCTGGCCATAAT...GCCGTGATCCTCACAAAACTGTGTCCCTTGCCTGTGGCTCCTTTCTAGTAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR TCA 90 bp | CTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATAGGTTGTGTTTGCGATaGGTCCAGCTGCAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLPNYTEVQMFQLHDRLCLR*VQLQET Trigger: TGTCTCCTGCAGCTGGACTCATCGCAAACACAACCT...ATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | TCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGACAGGGATCTAAGATCTaGTTCCACGTTGCCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SDQCSPKLHRGPNVPVTRQGSKI*FHVAMR Trigger: CCGCATGGCAACGTGGAATCAGATCTTAGATCCCTG...TCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATCAGGGATCTAAGATCTaGTTCCACGTTGCCATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLPNYTEVQMFQLHDQGSKI*FHVAMR Trigger: CCGCATGGCAACGTGGAATCAGATCTTAGATCCCTG...ATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACCGATGGCCATCGCACTaGCTAGAAAAAGTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: CLTSVLPNYTEVQMFQLHRWPSH*LEKVGT Trigger: TGTGCCCACTTTTTCTAGGCAGTGCGATGGCCATCG...GTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | GAAGGTGTGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAAGCTGCAGGAGACACTaGCTGCTTGGAACTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: EGVSDQCSPKLHRGPNVPSCRRH*LLGTVH Trigger: ATGAACAGTTCCAAGCAGCCAGTGTCTCCTGCAGCT...TGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | AGTCAGCTTAACAAAAGTCAGAAGGTGTGTCTGACCAGTGTTCTCCCAAACTACAGCCGGTTCTCCGTCTaGCAGGTTGTGTTTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQLNKSQKVCLTSVLPNYSRFSV*QVVFAM Trigger: CATCGCAAACACAACCTGCCAGACGGAGAACCGGCT...GTAGTTTGGGAGAACACTGGTCAGACACACCTTCTGACTTTTGTTAAGCTGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | GTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGATTCACTCGATGCTTGCTaGCTCTCCTTCTCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLPNYTEVQMFQLHDESDSLDAC*LSFSAA Trigger: AGCTGCAGAGAAGGAGAGCCAGCAAGCATCGAGTGA...ATCCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCTTTGCCTTCGTCACAGGTTGATGTTAAAAGATGGTCTCATTGTAGACAGGTTGTGTTTGCGATaGGTCCAGCTGCAGGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PELCLRHRLMLKDGLIVDRLCLR*VQLQET Trigger: TGTCTCCTGCAGCTGGACTCATCGCAAACACAACCT...GTCTACAATGAGACCATCTTTTAACATCAACCTGTGACGAAGGCAAAGCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR TCA 90 bp | TCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGAATTATGGCCAGGAGCTaGATGATCATCTCCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SDQCSPKLHRGPNVPVTRIMARS*MIISRW Trigger: CCACCTGGAGATGATCATTCAGCTCCTGGCCATAAT...TCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATCTTCTCTGCAGCTGGTaGCTCAGAAATAGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLPNYTEVQMFQLHDLLCSW*LRNSSN Trigger: GTTGCTGCTATTTCTGAGTCACCAGCTGCAGAGAAG...ATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGCGAACACAGCAAACATaGACACACCACTCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: VFSQTTQRSKCSSYTMSRRTQQT*THHSGS Trigger: TGATCCTGAGTGGTGTGTGCATGTTTGCTGTGTTCG...CCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | AATGATTATCCTCATCAGCCTCACAATATCAGGCTGGCCAACCTACACAGTGGCGATCTGATTCCACGTTaGCATGCGGAGAGCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NDYPHQPHNIRLANLHSGDLIPR*HAESKK Trigger: CTTTTTGCTCTCCGCATGGCAACGTGGAATCAGATC...GCCACTGTGTAGGTTGGCCAGCCTGATATTGTGAGGCTGATGAGGATAATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCTTTGCCTTCGTCACAGGTTGATGTTAAAAGATGGTCTCATTGTAGACTCACTCGATGCTTGCTaGCTCTCCTTCTCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PELCLRHRLMLKDGLIVDSLDAC*LSFSAA Trigger: AGCTGCAGAGAAGGAGAGCCAGCAAGCATCGAGTGA...GTCTACAATGAGACCATCTTTTAACATCAACCTGTGACGAAGGCAAAGCTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR GCA 90 bp | GAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACCGATGGCCATCGCACTaGCTAGAAAAAGTGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHRLNSNVCSTQGHHRWPSH*LEKVGT Trigger: TGTGCCCACTTTTTCTAGGCAGTGCGATGGCCATCG...GTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | TCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGACCTTGCCTATGCTGCTaGCTTCTGAACTTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDQCSPKLHRGPNVPVTRPCLCC*LLNFTL Trigger: AAGAGTGAAGTTCAGAAGCCAGCAGCATAGGCAAGG...TCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATCAGGAAGGAAGCCTTTaGCTTCTGTCTAAATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSVLPNYTEVQMFQLHDQEGSL*LLSKSL Trigger: CAGAGATTTAGACAGAAGTCAAAGGCTTCCTTCCTG...ATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | GAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACGCAGGAGACACTGGCTaGTTGGAACTGTTCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHRLNSNVCSTQGHHAGDTG*LELFID Trigger: GTCTATGAACAGTTCCAAGCAGCCAGTGTCTCCTGC...GTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCGGGATGATGCACATGATGCACAGAAATGCATTCAGGTAAAACATCCACTATACACCTCTCGATaGCCATCGCACTGCCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WFRDDAHDAQKCIQVKHPLYTSR*PSHCLE Trigger: TTCTAGGCAGTGCGATGGCCATCGAGAGGTGTATAG...TGGATGTTTTACCTGAATGCATTTCTGTGCATCATGTGCATCATCCCGAAACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CAA 72 bp | CCTTGGCACTTCCCAGAGCTTTGCCTTCGTCACAGGTaGATGTTAAAAGATGGTCTCATTGTAGACATCACA | + |
|
Preference number: 4 (lower is better) Translates to: PWHFPELCLRHR*MLKDGLIVDIT Trigger: TGTGATGTCTACAATGAGACCATCTTTTAACATCAACCTGTGACGAAGGCAAAGCTCTGGGAAGTGCCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR TCA 90 bp | GTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGGTGATCTTCGTAGAGTaGAATATAGGATTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: VFSQTTQRSKCSSYTMSRVIFVE*NIGLVT Trigger: AGTCACCAATCCTATATTTCACTCTACGAAGATCAC...CCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTTCGGGATGATGCACATGATGCACAGAAATGCATTCAGGTAAAACATCCACCTCCGTTGATAAGGTaGCCAAAGAAGTCTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: WFRDDAHDAQKCIQVKHPPPLIR*PKKSVI Trigger: GATCACAGACTTCTTTGGCCACCTTATCAACGGAGG...TGGATGTTTTACCTGAATGCATTTCTGTGCATCATGTGCATCATCCCGAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CAA 72 bp | ATTCTTTGGTTCACTCTGTCTTCACCTGCACCCATCTaGTTCTCTCTGCAGCTGATCTATGTAAAACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILWFTLSSPAPI*FSLQLIYVKLS Trigger: GGACAGTTTTACATAGATCAGCTGCAGAGAGAACAAGATGGGTGCAGGTGAAGACAGAGTGAACCAAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CAA 72 bp | TCAATAAGCTCTGCTCTTCTGGATTCTTCCCATTCTTaGGTTCACTCTGTCTTCACCTGCACCCATCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SISSALLDSSHS*VHSVFTCTHLV Trigger: AACAAGATGGGTGCAGGTGAAGACAGAGTGAACCAAAGAATGGGAAGAATCCAGAAGAGCAGAGCTTATTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CAA 72 bp | CCTCGAAACAAGTCCCTTCTCAGTGCCTTTCCTCAGTaGAAATGCATGGTCATGTTAACTGCAGAGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PRNKSLLSAFPQ*KCMVMLTAEFY Trigger: GTAAAACTCTGCAGTTAACATGACCATGCATTTCAACTGAGGAAAGGCACTGAGAAGGGACTTGTTTCGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CAA 72 bp | GGTCTCATTGTAGACATCACAGCAGTAGAGGAACAATaGTGTCCATATCAGAGGCTCACAATAAAGAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLIVDITAVEEQ*CPYQRLTIKSP Trigger: AGGGCTCTTTATTGTGAGCCTCTGATATGGACACAATTGTTCCTCTACTGCTGTGATGTCTACAATGAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR TCA 90 bp | TGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGTGATCTTCGTAGAGTaGAATATAGGATTGGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: CLTSVLPNYTEVQMFQLHVIFVE*NIGLVT Trigger: AGTCACCAATCCTATATTTCACTCTACGAAGATCAC...GTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CATTTATTCCAAGAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTTGGCCAGGAGCTGAATaGTCATCTCCAGGTGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLFQERKPHRLNSNVCSTWPGAE*SSPGGE Trigger: CTCACCACCTGGAGATGATCATTCAGCTCCTGGCCA...AGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTCTTGGAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | TCGGATCAACTGAGATGTTTCAGAAGTTTCCGTGACTTTCTTCTAATACTGCATCTTCTCTGCAGCTGGTaGCTCAGAAATAGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SDQLRCFRSFRDFLLILHLLCSW*LRNSSN Trigger: GTTGCTGCTATTTCTGAGTCACCAGCTGCAGAGAAG...ATGCAGTATTAGAAGAAAGTCACGGAAACTTCTGAAACATCTCAGTTGATCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | CAATTGAAATGTGTCAGGAATGACTTGAAATCCAACACTATTTACCAAGTGGTACTGGCAGGTTGTGTTTaGGATGAGTCCAGCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLKCVRNDLKSNTIYQVVLAGCV*DESSCR Trigger: CCTGCAGCTGGACTCATCGCAAACACAACCTGCCAG...TACCACTTGGTAAATAGTGTTGGATTTCAAGTCATTCCTGACACATTTCAATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR GCA 90 bp | TTCTTACTAGAAAGGAGCCACAGGCAAGGGACACAGTTTTGTGAGGATCACGGCAGATTCCAAAAATACTaGACAGGATGTTTGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FLLERSHRQGTQFCEDHGRFQKY*TGCLTD Trigger: ATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCT...GCCGTGATCCTCACAAAACTGTGTCCCTTGCCTGTGGCTCCTTTCTAGTAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR GCA 90 bp | CTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGATCAACTGAGTTCCCAGATATaGAAGCTGATGATGTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LPNYTEVQMFQLHDESDQLSSQI*KLMMLT Trigger: AGTTAACATCATCAGCTTGCATATCTGGGAACTCAG...TTGATCCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | TCGGATCAACTGAGATGTTTCAGAAGTTTCCGTGACTTTCTTCTAATACTGCATAGCTGCAGGAGACACTaGCTGCTTGGAACTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SDQLRCFRSFRDFLLILHSCRRH*LLGTVH Trigger: ATGAACAGTTCCAAGCAGCCAGTGTCTCCTGCAGCT...ATGCAGTATTAGAAGAAAGTCACGGAAACTTCTGAAACATCTCAGTTGATCCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | CACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACATTGTATCTGTCCTATACACCTCTCGATaGCCATCGCACTGCCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRLNSNVCSTQGHHIVSVLYTSR*PSHCLE Trigger: TTCTAGGCAGTGCGATGGCCATCGAGAGGTGTATAG...GACAGATACAATGTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | CAAAAGTCAGAAGGTGTGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCACATTTATTGCAATGTTaGCCATTGTTACCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKSEGVSDQCSPKLHRGPHLLQC*PLLPER Trigger: CCTTTCTGGTAACAATGGCCAACATTGCAATAAATG...TGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTCTGACTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACATTGTATCTGTCCACAGGATGTTTGACTaGTCAAAGCGGATCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRLNSNVCSTQGHHIVSVHRMFD*SKRIQS Trigger: AGACTGGATCCGCTTTGATCAGTCAAACATCCTGTG...GACAGATACAATGTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | CACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACATTGTATCTGTCCGAACACAGCAAACATaGACACACCACTCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: HRLNSNVCSTQGHHIVSVRTQQT*THHSGS Trigger: TGATCCTGAGTGGTGTGTGCATGTTTGCTGTGTTCG...GACAGATACAATGTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | TGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACCGTTTCACAGGTCACTaGGGAATTATTTCCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: CLTSVLPNYTEVQMFQLHRFTGH*GIISIY Trigger: ATAAATGGAAATAATTCCCCAGTGACCTGTGAAACG...GTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | CATTTATTCCAAGAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTGCAGGAGACACTGGCTaGTTGGAACTGTTCATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLFQERKPHRLNSNVCSTAGDTG*LELFID Trigger: GTCTATGAACAGTTCCAAGCAGCCAGTGTCTCCTGC...AGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTCTTGGAATAAATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | ACACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACATTGTATCTGTCCTTGCCTATGCTGCTaGCTTCTGAACTTCACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQIKLKCVFYSRTPHCICPCLCC*LLNFTL Trigger: AAGAGTGAAGTTCAGAAGCCAGCAGCATAGGCAAGG...ACAGATACAATGTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR TCA 90 bp | CATTTATTCCAAGAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTCACAGGATGTTTGACTaGTCAAAGCGGATCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLFQERKPHRLNSNVCSTHRMFD*SKRIQS Trigger: AGACTGGATCCGCTTTGATCAGTCAAACATCCTGTG...AGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTCTTGGAATAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR GCA 90 bp | CATTTATTCCAAGAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTGATCTGATTCCACGTTaGCATGCGGAGAGCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLFQERKPHRLNSNVCSTDLIPR*HAESKK Trigger: CTTTTTGCTCTCCGCATGGCAACGTGGAATCAGATC...AGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTCTTGGAATAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | GAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACCGTTTCACAGGTCACTaGGGAATTATTTCCATTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ERKPHRLNSNVCSTQGHHRFTGH*GIISIY Trigger: ATAAATGGAAATAATTCCCCAGTGACCTGTGAAACG...GTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| 3UTR CAA 72 bp | ACTCAAGGACACCACATTGTATCTGTCTATCTCCTGTaGACACAAACAAATGAAATACACAACCATGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQGHHIVSVYLL*TQTNEIHNHAA Trigger: TGCTGCATGGTTGTGTATTTCATTTGTTTGTGTCAACAGGAGATAGACAGATACAATGTGGTGTCCTTGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | CACAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACATTGTATCTGTCAGCCAGAAAAGACCATaGAGATTCCAAAAATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLNSNVCSTQGHHIVSVSQKRP*RFQKYC Trigger: GCAGTATTTTTGGAATCTCCATGGTCTTTTCTGGCT...GACAGATACAATGTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| 3UTR CAA 72 bp | GGCTTTTGGAAGTGTGGTTCAACTTATTTAGTGAAATaGCTGTTAACAGAACTTCCTTCTGTCTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFWKCGSTYLVK*LLTELPSVCVC Trigger: ACACACACAGACAGAAGGAAGTTCTGTTAACAGCAATTTCACTAAATAAGTTGAACCACACTTCCAAAAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CAA 72 bp | AGAGTTTTACCAACTATAATTAGGGAAGACAGAGACTaGGTTCTTCATGCCTCTGTTTTTAAGATGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RVLPTIIREDRD*VLHASVFKMPT Trigger: TGTTGGCATCTTAAAAACAGAGGCATGAAGAACCAAGTCTCTGTCTTCCCTAATTATAGTTGGTAAAACTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS-3UTR GCA 90 bp | CATTTATTCCAAGAACGTAAGCCACACAGATTAAACTCAAATGTGTGTTCTACTCTGAGTTCCCAGATATaGAAGCTGATGATGTTAACT | + |
|
Preference number: 4 (lower is better) Translates to: HLFQERKPHRLNSNVCSTLSSQI*KLMMLT Trigger: AGTTAACATCATCAGCTTGCATATCTGGGAACTCAG...AGTAGAACACACATTTGAGTTTAATCTGTGTGGCTTACGTTCTTGGAATAAATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CCA 90 bp | CAGATTAAACTCAAATGTGTGTTCTACTCAAGGACACCACATTGTATCTGTCTACATTTATTGCAATGTTaGCCATTGTTACCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QIKLKCVFYSRTPHCICLHLLQC*PLLPER Trigger: CCTTTCTGGTAACAATGGCCAACATTGCAATAAATG...TAGACAGATACAATGTGGTGTCCTTGAGTAGAACACACATTTGAGTTTAATCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| 3UTR CAA 72 bp | TCACTTCCTCTCCAATTGAAATGTGTCAGGAATGACTaGAAATCCAACACTATTTACCAAGTGGTAAATTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLPLQLKCVRND*KSNTIYQVVNS Trigger: AGAATTTACCACTTGGTAAATAGTGTTGGATTTCAAGTCATTCCTGACACATTTCAATTGGAGAGGAAGTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| 3UTR CAA 72 bp | AACAGAAATGAAAATTCTCCTTCAAGAGTCCCACATTaGTATGACTTTCTAAAGCTAACCTCTCATGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NRNENSPSRVPH*YDFLKLTSHGK Trigger: CTTACCATGAGAGGTTAGCTTTAGAAAGTCATACAAATGTGGGACTCTTGAAGGAGAATTTTCATTTCTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS TCA 90 bp | GACTCCAGCAGACGCAGGAGACGCACATTATGGCCAGGAGCTGAATaGTCATCTCCAGGTGGTGAGATCTGCCTTGCCTATGCTGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: DSSRRRRRTLWPGAE*SSPGGEICLAYAAG Trigger: GCCAGCAGCATAGGCAAGGCAGATCTCACCACCTGGAGATGATCATTCAGCTCCTGGCCATAATGTGCGTCTCCTGCGTCTGCTGGAGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS CCA 90 bp | ACCAGGTTCTGGACGCTTGGATTTGATAATCTCGGTGTCCAAGGATaGGCAGCACAGCCACGAACACAGCAAACATGCACACACCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRFWTLGFDNLGVQG*AAQPRTQQTCTHHS Trigger: TGAGTGGTGTGTGCATGTTTGCTGTGTTCGTGGCTGTGCTGCCCATCCTTGGACACCGAGATTATCAAATCCAAGCGTCCAGAACCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS CCA 90 bp | CTTCCCAGTCTTCGATGTGCTCTGTGTTGTAGAAACACCAGGTTCTaGACGCTTGGATTTGATAATCTCGGTGTCCAAGGATGGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPSLRCALCCRNTRF*TLGFDNLGVQGWAA Trigger: TGCTGCCCATCCTTGGACACCGAGATTATCAAATCCAAGCGTCCAGAACCTGGTGTTTCTACAACACAGAGCACATCGAAGACTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CAA 90 bp | TGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGTGGTGAGATCTGCCTaGCCTATGCTGCTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CLTSVLPNYTEVQMFQLHVVRSA*PMLLAS Trigger: AGAAGCCAGCAGCATAGGCAAGGCAGATCTCACCAC...GTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS-3UTR CAA 90 bp | CTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGTGGTGAGATCTGCCTaGCCTATGCTGCTGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSVLPNYTEVQMFQLHDVVRSA*PMLLAS Trigger: AGAAGCCAGCAGCATAGGCAAGGCAGATCTCACCAC...ATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS TCA 90 bp | GTCTGTGATCACCAGGCCACTAGCCAAAAGCAGGAAGGAAGCCTTTaGCTTCTGTCTAAATCTCTGGTAGGCCTTCATGAGAATGGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: VCDHQATSQKQEGSL*LLSKSLVGLHENGD Trigger: ATCGCCATTCTCATGAAGGCCTACCAGAGATTTAGACAGAAGTCAAAGGCTTCCTTCCTGCTTTTGGCTAGTGGCCTGGTGATCACAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CCA 90 bp | TCGTTTCACAGGTCACTGGGGAATTATTTCCATTTATTGCAATGTTaGCCATTGTTACCAGAAAGGGACTCCAGCAGACGCAGGAGACGC | + |
|
Preference number: 5 (lower is better) Translates to: SFHRSLGNYFHLLQC*PLLPERDSSRRRRR Trigger: GCGTCTCCTGCGTCTGCTGGAGTCCCTTTCTGGTAACAATGGCCAACATTGCAATAAATGGAAATAATTCCCCAGTGACCTGTGAAACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS-3UTR CAA 90 bp | AATGATTATCCTCATCAGCCTCACAATATCAGGCTGGCCAACCTACACAGTGGCTACTGCACAGGATGTTaGACTGATCAAAGCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: NDYPHQPHNIRLANLHSGYCTGC*TDQSGS Trigger: GGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTA...GCCACTGTGTAGGTTGGCCAGCCTGATATTGTGAGGCTGATGAGGATAATCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
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| CDS-3UTR CAA 90 bp | GTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGTACTGCACAGGATGTTaGACTGATCAAAGCGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: VFSQTTQRSKCSSYTMSRYCTGC*TDQSGS Trigger: GGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTA...CCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CAA 90 bp | GAAGGTGTGTCTGACCAGTGTTCTCCCAAACTACACAGAGGTCCAAATGTTCCATTGCAATGTTGGCCATaGTTACCAGAAAGGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGVSDQCSPKLHRGPNVPLQCWP*LPERDS Trigger: GGAGTCCCTTTCTGGTAACAATGGCCAACATTGCAA...TGGAACATTTGGACCTCTGTGTAGTTTGGGAGAACACTGGTCAGACACACCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CAA 90 bp | AATGATTATCCTCATCAGCCTCACAATATCAGGCTGGCCAACCTACACAGTGGCAGATCTGATTCCACGTaGCCATGCGGAGAGCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NDYPHQPHNIRLANLHSGRSDST*PCGEQK Trigger: TTTTTGCTCTCCGCATGGCAACGTGGAATCAGATCT...GCCACTGTGTAGGTTGGCCAGCCTGATATTGTGAGGCTGATGAGGATAATCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS CCA 90 bp | TTATCAGAAGCATATACAAAGACAGCTATGCCTCCGTTGATAAGGTaGCCAAAGAAGTCTGTGATCACCAGGCCACTAGCCAAAAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSEAYTKTAMPPLIR*PKKSVITRPLAKSR Trigger: CCTGCTTTTGGCTAGTGGCCTGGTGATCACAGACTTCTTTGGCCACCTTATCAACGGAGGCATAGCTGTCTTTGTATATGCTTCTGATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGATCAAAGATCTGATTCCACGTaGCCATGCGGAGAGCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LPNYTEVQMFQLHDESDQRSDST*PCGEQK Trigger: TTTTTGCTCTCCGCATGGCAACGTGGAATCAGATCT...TTGATCCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CAA 90 bp | CTCCCAAACTACACAGAGGTCCAAATGTTCCAGTTACACGATGAGTCGGATCAAACCTTTAAGGAATTCTaGATGGAGCTGAGTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPNYTEVQMFQLHDESDQTFKEF*MELSSQ Trigger: CTGGGAACTCAGCTCCATCAAGAATTCCTTAAAGGT...TTGATCCGACTCATCGTGTAACTGGAACATTTGGACCTCTGTGTAGTTTGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS TCA 90 bp | CCACTCAGGATCATTTTCACGTGTTTAGATGTGATCTTCGTAGAGTaGAATATAGGATTGGTGACTCCTATACACCTCTCGATGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: PLRIIFTCLDVIFVE*NIGLVTPIHLSMAI Trigger: GATGGCCATCGAGAGGTGTATAGGAGTCACCAATCCTATATTTCACTCTACGAAGATCACATCTAAACACGTGAAAATGATCCTGAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS GCA 90 bp | AAAGTGGGCACAAGCCAGAAAAGACCATGGAGATTCCAAAAATACTaGACAGGATGTTTGACTGATCAAAGCGGATCCAGTCTTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: KVGTSQKRPWRFQKY*TGCLTDQSGSSLYQ Trigger: CTGATAAAGACTGGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCTCCATGGTCTTTTCTGGCTTGTGCCCACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS-3UTR CAA 90 bp | AGACAAAGCCGGCATTTCTCTACAATTTTCAGAGGAACTGGAGATTACTTAGACACCTTTAAGGAATTCTaGATGGAGCTGAGTTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RQSRHFSTIFRGTGDYLDTFKEF*MELSSQ Trigger: CTGGGAACTCAGCTCCATCAAGAATTCCTTAAAGGT...GTCTAAGTAATCTCCAGTTCCTCTGAAAATTGTAGAGAAATGCCGGCTTTGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029670.7 |
||
| CDS TCA 90 bp | GCCAGAAAAGACCATGGAGATTCCAAAAATACTGCACAGGATGTTTaGCTGATCAAAGCGGATCCAGTCTTTATCAGAAGCATATACAAA | + |
|
Preference number: 5 (lower is better) Translates to: ARKDHGDSKNTAQDV*LIKADPVFIRSIYK Trigger: TTTGTATATGCTTCTGATAAAGACTGGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCTCCATGGTCTTTTCTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS TCA 90 bp | GAAAAGACCATGGAGATTCCAAAAATACTGCACAGGATGTTTGACTaGTCAAAGCGGATCCAGTCTTTATCAGAAGCATATACAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: EKTMEIPKILHRMFD*SKRIQSLSEAYTKT Trigger: TGTCTTTGTATATGCTTCTGATAAAGACTGGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCTCCATGGTCTTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS GCA 72 bp | CTCCGTCTGGCAGGTTGTGTTTGCGATGAGTCCAGCTaGAGGAGACACTGGCTGCTTGGAACTGTTCATAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRLAGCVCDESS*RRHWLLGTVHR Trigger: TCTATGAACAGTTCCAAGCAGCCAGTGTCTCCTGCAGCTGGACTCATCGCAAACACAACCTGCCAGACGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS TCA 72 bp | AGACGCAGGAGACGCACATTATGGCCAGGAGCTGAATaGTCATCTCCAGGTGGTGAGATCTGCCTTGCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: RRRRRTLWPGAE*SSPGGEICLAY Trigger: ATAGGCAAGGCAGATCTCACCACCTGGAGATGATCATTCAGCTCCTGGCCATAATGTGCGTCTCCTGCGTCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS CAA 90 bp | GATGTGCTCTGTGTTGTAGAAACACCAGGTTCTGGACGCTTGGATTaGATAATCTCGGTGTCCAAGGATGGGCAGCACAGCCACGAACAC | + |
|
Preference number: 6 (lower is better) Translates to: DVLCVVETPGSGRLD*IISVSKDGQHSHEH Trigger: GTGTTCGTGGCTGTGCTGCCCATCCTTGGACACCGAGATTATCAAATCCAAGCGTCCAGAACCTGGTGTTTCTACAACACAGAGCACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
||
| CDS CAA 90 bp | GTCTTCGATGTGCTCTGTGTTGTAGAAACACCAGGTTCTGGACGCTaGGATTTGATAATCTCGGTGTCCAAGGATGGGCAGCACAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VFDVLCVVETPGSGR*DLIISVSKDGQHSH Trigger: GTGGCTGTGCTGCCCATCCTTGGACACCGAGATTATCAAATCCAAGCGTCCAGAACCTGGTGTTTCTACAACACAGAGCACATCGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 90 bp | TCCGTAGCAGAATATAGACCCAGGGATCTAAGATCTGATTCCACGTaGCCATGCGGAGAGCAAAAAGTGTCGTTTCACAGGTCACTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SVAEYRPRDLRSDST*PCGEQKVSFHRSLG Trigger: CCCCAGTGACCTGTGAAACGACACTTTTTGCTCTCCGCATGGCAACGTGGAATCAGATCTTAGATCCCTGGGTCTATATTCTGCTACGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CCA 72 bp | GCATATACAAAGACAGCTATGCCTCCGTTGATAAGGTaGCCAAAGAAGTCTGTGATCACCAGGCCACTAGCC | + |
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Preference number: 6 (lower is better) Translates to: AYTKTAMPPLIR*PKKSVITRPLA Trigger: GGCTAGTGGCCTGGTGATCACAGACTTCTTTGGCCACCTTATCAACGGAGGCATAGCTGTCTTTGTATATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 72 bp | TGTGTTGTAGAAACACCAGGTTCTGGACGCTTGGATTaGATAATCTCGGTGTCCAAGGATGGGCAGCACAGC | + |
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Preference number: 6 (lower is better) Translates to: CVVETPGSGRLD*IISVSKDGQHS Trigger: GCTGTGCTGCCCATCCTTGGACACCGAGATTATCAAATCCAAGCGTCCAGAACCTGGTGTTTCTACAACACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 72 bp | GTGCTCTGTGTTGTAGAAACACCAGGTTCTGGACGCTaGGATTTGATAATCTCGGTGTCCAAGGATGGGCAG | + |
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Preference number: 6 (lower is better) Translates to: VLCVVETPGSGR*DLIISVSKDGQ Trigger: CTGCCCATCCTTGGACACCGAGATTATCAAATCCAAGCGTCCAGAACCTGGTGTTTCTACAACACAGAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 72 bp | AACTTCACTCTTAAGAGTGTGACTCCCGTGACGGCATaGCACGAGAAGGAAACACCAAGAGCTAAGAGTCCG | + |
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Preference number: 6 (lower is better) Translates to: NFTLKSVTPVTA*HEKETPRAKSP Trigger: CGGACTCTTAGCTCTTGGTGTTTCCTTCTCGTGCAATGCCGTCACGGGAGTCACACTCTTAAGAGTGAAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 90 bp | TGGCTTCTGAACTTCACTCTTAAGAGTGTGACTCCCGTGACGGCATaGCACGAGAAGGAAACACCAAGAGCTAAGAGTCCGAGGAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: WLLNFTLKSVTPVTA*HEKETPRAKSPRKE Trigger: TTCTTTCCTCGGACTCTTAGCTCTTGGTGTTTCCTTCTCGTGCAATGCCGTCACGGGAGTCACACTCTTAAGAGTGAAGTTCAGAAGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 90 bp | GTCGTTTCACAGGTCACTGGGGAATTATTTCCATTTATTGCAATGTaGGCCATTGTTACCAGAAAGGGACTCCAGCAGACGCAGGAGACG | + |
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Preference number: 6 (lower is better) Translates to: VVSQVTGELFPFIAM*AIVTRKGLQQTQET Trigger: CGTCTCCTGCGTCTGCTGGAGTCCCTTTCTGGTAACAATGGCCAACATTGCAATAAATGGAAATAATTCCCCAGTGACCTGTGAAACGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 90 bp | CACAGGTCACTGGGGAATTATTTCCATTTATTGCAATGTTGGCCATaGTTACCAGAAAGGGACTCCAGCAGACGCAGGAGACGCACATTA | + |
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Preference number: 6 (lower is better) Translates to: HRSLGNYFHLLQCWP*LPERDSSRRRRRTL Trigger: TAATGTGCGTCTCCTGCGTCTGCTGGAGTCCCTTTCTGGTAACAATGGCCAACATTGCAATAAATGGAAATAATTCCCCAGTGACCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 72 bp | GAATATAGACCCAGGGATCTAAGATCTGATTCCACGTaGCCATGCGGAGAGCAAAAAGTGTCGTTTCACAGG | + |
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Preference number: 6 (lower is better) Translates to: EYRPRDLRSDST*PCGEQKVSFHR Trigger: CCTGTGAAACGACACTTTTTGCTCTCCGCATGGCAACGTGGAATCAGATCTTAGATCCCTGGGTCTATATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 72 bp | CTGGGGAATTATTTCCATTTATTGCAATGTTGGCCATaGTTACCAGAAAGGGACTCCAGCAGACGCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: LGNYFHLLQCWP*LPERDSSRRRR Trigger: TCTCCTGCGTCTGCTGGAGTCCCTTTCTGGTAACAATGGCCAACATTGCAATAAATGGAAATAATTCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS TCA 72 bp | GACCATGGAGATTCCAAAAATACTGCACAGGATGTTTaGCTGATCAAAGCGGATCCAGTCTTTATCAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: DHGDSKNTAQDV*LIKADPVFIRS Trigger: GCTTCTGATAAAGACTGGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCTCCATGGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 72 bp | AGACCATGGAGATTCCAAAAATACTGCACAGGATGTTaGACTGATCAAAGCGGATCCAGTCTTTATCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: RPWRFQKYCTGC*TDQSGSSLYQK Trigger: CTTCTGATAAAGACTGGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCTCCATGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS CAA 90 bp | AGCCAGAAAAGACCATGGAGATTCCAAAAATACTGCACAGGATGTTaGACTGATCAAAGCGGATCCAGTCTTTATCAGAAGCATATACAA | + |
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Preference number: 6 (lower is better) Translates to: SQKRPWRFQKYCTGC*TDQSGSSLYQKHIQ Trigger: TTGTATATGCTTCTGATAAAGACTGGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCTCCATGGTCTTTTCTGGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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| CDS TCA 72 bp | ATGGAGATTCCAAAAATACTGCACAGGATGTTTGACTaGTCAAAGCGGATCCAGTCTTTATCAGAAGCATAT | + |
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Preference number: 6 (lower is better) Translates to: MEIPKILHRMFD*SKRIQSLSEAY Trigger: ATATGCTTCTGATAAAGACTGGATCCGCTTTGATCAGTCAAACATCCTGTGCAGTATTTTTGGAATCTCCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029670.7 ENSMUST00000106126.2 |
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