Pregenerated sensors for PTGES3L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000097487Ensembl transcript IDs: ENSMUST00000093933.11, ENSMUST00000103102.10, ENSMUST00000107252.9, ENSMUST00000149706.2
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | ATGCAGGAGCACGCTCAGGCAGGCGCCCAGGAGGAAGACCTAACACGTGGAGGGGTTCAGAGGTCTCTGTaGATCTTGATGCAAACCAAG | + |
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Preference number: 2 (lower is better) Translates to: MQEHAQAGAQEEDLTRGGVQRSL*ILMQTK Trigger: CTTGGTTTGCATCAAGATCCACAGAGACCTCTGAAC...CCCTCCACGTGTTAGGTCTTCCTCCTGGGCGCCTGCCTGAGCGTGCTCCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| 3UTR-3UTR TCA 90 bp | GGCGCCCAGGAGGAAGACCTAACACGTGGAGGGGCACCCTTCAGAAAGAGCTTCTGCAAACCAAGTAGTTaGAGAAGGCACCATCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: GAQEEDLTRGGAPFRKSFCKPSS*RRHHPS Trigger: ACTGGGATGGTGCCTTCTTCAACTACTTGGTTTGCA...GAAGCTCTTTCTGAAGGGTGCCCCTCCACGTGTTAGGTCTTCCTCCTGGGCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| 3UTR-3UTR TCA 90 bp | CGCCCAGGAGGAAGACCTAACACGTGGAGGGGCACCCTTCAGAAAGAGCTTCTGTGCAAACCAAGTAGTTaGAGAAGGCACCATCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RPGGRPNTWRGTLQKELLCKPSS*RRHHPS Trigger: ACTGGGATGGTGCCTTCTTCAACTACTTGGTTTGCA...CAGAAGCTCTTTCTGAAGGGTGCCCCTCCACGTGTTAGGTCTTCCTCCTGGGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| 3UTR-3UTR TCA 90 bp | ACATTTGAACACATGTCCCAACACCCAATCATCCCAAGCACAGATTCTAAGTCGGCGTCCCACCCCACCTaGTGCAGGAGCACGCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: TFEHMSQHPIIPSTDSKSASHPT*CRSTLR Trigger: CCTGAGCGTGCTCCTGCATCAGGTGGGGTGGGACGC...CGACTTAGAATCTGTGCTTGGGATGATTGGGTGTTGGGACATGTGTTCAAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| 3UTR-3UTR TCA 90 bp | GATGGCTCAATAAAAATAGGCAGCTGCTGTAAGCCGGGCAGTGGTGACACACGCCCAAGCCTGAGGACATaGGTTCAATTCCTGGGACCT | + |
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Preference number: 2 (lower is better) Translates to: DGSIKIGSCCKPGSGDTRPSLRT*VQFLGP Trigger: AGGTCCCAGGAATTGAACTCATGTCCTCAGGCTTGG...GCGTGTGTCACCACTGCCCGGCTTACAGCAGCTGCCTATTTTTATTGAGCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| 3UTR-3UTR TCA 90 bp | ATGGGCTGGCAAGATGGCTCAATAAAAATAGGCAGCTGCTGTAAGCCGGGCAGTAGCTGCTGCCAAGCCTaGGGACATGAGTTCAATTCC | + |
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Preference number: 2 (lower is better) Translates to: MGWQDGSIKIGSCCKPGSSCCQA*GHEFNS Trigger: GGAATTGAACTCATGTCCTCAGGCTTGGCAGCAGCT...ACTGCCCGGCTTACAGCAGCTGCCTATTTTTATTGAGCCATCTTGCCAGCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| 3UTR-3UTR TCA 90 bp | AGAAATTTTACTGATATGGGCTGGCAAGATGGCTCAATAAAAATAGGCAGCTGCAGGCAGGAGGATTTCTaGGTCCGAGGCCAGCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: RNFTDMGWQDGSIKIGSCRQEDF*VRGQPG Trigger: ACCAGGCTGGCCTCGGACTCAGAAATCCTCCTGCCT...GCAGCTGCCTATTTTTATTGAGCCATCTTGCCAGCCCATATCAGTAAAATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS-3UTR GCA 90 bp | ACCCCACCTGATGCAGGAGCACGCTCAGGCAGGCGCCCAGGAGGAAGACCTAACGTCAGAATCATCCTCTaGATAATGTTCCACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: TPPDAGARSGRRPGGRPNVRIIL*IMFHLS Trigger: GCTCAGGTGGAACATTATGCAGAGGATGATTCTGAC...GTTAGGTCTTCCTCCTGGGCGCCTGCCTGAGCGTGCTCCTGCATCAGGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103102.10 |
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| CDS-3UTR CCA 90 bp | GATGGCTCAATAAAAATAGGCAGCTGCTGTAAGCCGGGCAGTGGTGACACACGCCCAGAACGCTTATCCTaGGAGTCCTTGGAGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: DGSIKIGSCCKPGSGDTRPERLS*ESLEFT Trigger: GGTGAACTCCAAGGACTCCCAGGATAAGCGTTCTGG...GCGTGTGTCACCACTGCCCGGCTTACAGCAGCTGCCTATTTTTATTGAGCCATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS-3UTR CCA 90 bp | CGCCCAGGAGGAAGACCTAACACGTGGAGGGGCACCCTTCAGAAAGAGCTTCTGCCTTGGAGTTCACCTTaGCATAGAATTCAATCTCGT | + |
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Preference number: 4 (lower is better) Translates to: RPGGRPNTWRGTLQKELLPWSSP*HRIQSR Trigger: ACGAGATTGAATTCTATGCCAAGGTGAACTCCAAGG...CAGAAGCTCTTTCTGAAGGGTGCCCCTCCACGTGTTAGGTCTTCCTCCTGGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| CDS-3UTR CCA 90 bp | ATGGGCTGGCAAGATGGCTCAATAAAAATAGGCAGCTGCTGTAAGCCGGGCAGTCTTCTGATCTCCTCATaGGTACTGTGGCTTGTGTGC | + |
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Preference number: 4 (lower is better) Translates to: MGWQDGSIKIGSCCKPGSLLISS*VLWLVC Trigger: GCACACAAGCCACAGTACCCATGAGGAGATCAGAAG...ACTGCCCGGCTTACAGCAGCTGCCTATTTTTATTGAGCCATCTTGCCAGCCCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS-3UTR CCA 90 bp | GCTTTGCCACATTTGAACACATGTCCCAACACCCAATCATCCCAAGCACAGATTCCAGAACGCTTATCCTaGGAGTCCTTGGAGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: ALPHLNTCPNTQSSQAQIPERLS*ESLEFT Trigger: GGTGAACTCCAAGGACTCCCAGGATAAGCGTTCTGG...AATCTGTGCTTGGGATGATTGGGTGTTGGGACATGTGTTCAAATGTGGCAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| CDS-3UTR CCA 90 bp | TTTGCCACATTTGAACACATGTCCCAACACCCAATCATCCCAAGCACAGATTCTCCAGAACGCTTATCCTaGGAGTCCTTGGAGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: FATFEHMSQHPIIPSTDSPERLS*ESLEFT Trigger: GGTGAACTCCAAGGACTCCCAGGATAAGCGTTCTGG...AGAATCTGTGCTTGGGATGATTGGGTGTTGGGACATGTGTTCAAATGTGGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| CDS-3UTR GCA 90 bp | CACACACACAATCTTAGGCATGGTGAAACACACCTTCCCAGCACTAGGGATCCCATAGTTAAGATTCTCTaGATAATGTTCCACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: HTHNLRHGETHLPSTRDPIVKIL*IMFHLS Trigger: GCTCAGGTGGAACATTATGCAGAGAATCTTAACTAT...GGGATCCCTAGTGCTGGGAAGGTGTGTTTCACCATGCCTAAGATTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149706.2 |
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| CDS-3UTR GCA 90 bp | TTTGCCACATTTGAACACATGTCCCAACACCCAATCATCCCAAGCACAGATTCTCTTGTTCAGAAGCTCTaGATAATGTTCCACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: FATFEHMSQHPIIPSTDSLVQKL*IMFHLS Trigger: GCTCAGGTGGAACATTATGCAGAGCTTCTGAACAAG...AGAATCTGTGCTTGGGATGATTGGGTGTTGGGACATGTGTTCAAATGTGGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107252.9 |
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| CDS-3UTR GCA 90 bp | AGAAATTTTACTGATATGGGCTGGCAAGATGGCTCAATAAAAATAGGCAGCTGCGCTTGTGTGCATCTCTaGATAATGTTCCACCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RNFTDMGWQDGSIKIGSCACVHL*IMFHLS Trigger: GCTCAGGTGGAACATTATGCAGAGATGCACACAAGC...GCAGCTGCCTATTTTTATTGAGCCATCTTGCCAGCCCATATCAGTAAAATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS-3UTR CCA 90 bp | AGAAATTTTACTGATATGGGCTGGCAAGATGGCTCAATAAAAATAGGCAGCTGCCCTTGGAGTTCACCTTaGCATAGAATTCAATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RNFTDMGWQDGSIKIGSCPWSSP*HRIQSR Trigger: ACGAGATTGAATTCTATGCCAAGGTGAACTCCAAGG...GCAGCTGCCTATTTTTATTGAGCCATCTTGCCAGCCCATATCAGTAAAATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS-3UTR CAA 90 bp | GTCCCACCCCACCTGATGCAGGAGCACGCTCAGGCAGGCGCCCAGGAGGAAGACTCCATGAAAACATATTaGGGTCTGTCGTACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: VPPHLMQEHAQAGAQEEDSMKTY*GLSYHR Trigger: TCTGTGGTACGACAGACCCAAATATGTTTTCATGGA...GTCTTCCTCCTGGGCGCCTGCCTGAGCGTGCTCCTGCATCAGGTGGGGTGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| CDS GCA 90 bp | GAGTCTTCTGATCTCCTCATGGGTACTGTGGCTTGTGTGCATCTCTaGATAATGTTCCACCTGAGCCAGCTCCACCTCATCGTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ESSDLLMGTVACVHL*IMFHLSQLHLIVSF Trigger: GAAGGAGACGATGAGGTGGAGCTGGCTCAGGTGGAACATTATGCAGAGATGCACACAAGCCACAGTACCCATGAGGAGATCAGAAGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS-3UTR CAA 90 bp | GCTTTGCCACATTTGAACACATGTCCCAACACCCAATCATCCCAAGCACAGATTTCCATGAAAACATATTaGGGTCTGTCGTACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: ALPHLNTCPNTQSSQAQISMKTY*GLSYHR Trigger: TCTGTGGTACGACAGACCCAAATATGTTTTCATGGA...AATCTGTGCTTGGGATGATTGGGTGTTGGGACATGTGTTCAAATGTGGCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| CDS-3UTR CAA 90 bp | AGAAATTTTACTGATATGGGCTGGCAAGATGGCTCAATAAAAATAGGCAGCTGCTCCATGAAAACATATTaGGGTCTGTCGTACCACAGA | + |
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Preference number: 5 (lower is better) Translates to: RNFTDMGWQDGSIKIGSCSMKTY*GLSYHR Trigger: TCTGTGGTACGACAGACCCAAATATGTTTTCATGGA...GCAGCTGCCTATTTTTATTGAGCCATCTTGCCAGCCCATATCAGTAAAATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS CCA 72 bp | ACTCCATCACCATTCCTGCAGCTGAACACGACGCGGTaGTCCTCAATGAGCACACTGACGTCGGTGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TPSPFLQLNTTR*SSMSTLTSVLS Trigger: GGACAGCACCGACGTCAGTGTGCTCATTGAGGACCACCGCGTCGTGTTCAGCTGCAGGAATGGTGATGGAGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093933.11 ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| CDS GCA 72 bp | GATCTCCTCATGGGTACTGTGGCTTGTGTGCATCTCTaGATAATGTTCCACCTGAGCCAGCTCCACCTCATC | + |
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Preference number: 6 (lower is better) Translates to: DLLMGTVACVHL*IMFHLSQLHLI Trigger: GATGAGGTGGAGCTGGCTCAGGTGGAACATTATGCAGAGATGCACACAAGCCACAGTACCCATGAGGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093933.11 |
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| CDS CAA 72 bp | GTGCTGTCCTCAACGCAAAACTCCATGAAAACATATTaGGGTCTGTCGTACCACAGAGTCCGGGCAGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: VLSSTQNSMKTY*GLSYHRVRAGC Trigger: GCAGCCTGCCCGGACTCTGTGGTACGACAGACCCAAATATGTTTTCATGGAGTTTTGCGTTGAGGACAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093933.11 ENSMUST00000103102.10 ENSMUST00000107252.9 |
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| CDS CCA 72 bp | CAGAACGCTTATCCTGGGAGTCCTTGGAGTTCACCTTaGCATAGAATTCAATCTCGTTATACAGCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: QNAYPGSPWSSP*HRIQSRYTAPL Trigger: GAGTGGAGCTGTATAACGAGATTGAATTCTATGCCAAGGTGAACTCCAAGGACTCCCAGGATAAGCGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093933.11 ENSMUST00000103102.10 ENSMUST00000107252.9 |
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