Pregenerated sensors for PTGES (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050737Ensembl transcript IDs: ENSMUST00000102852.6
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGTCTGGGGCACAGGGCTTGCCCCGCTGGGAGGAGAAGTGGTGTaGCTAGGCTTGTGTGGGAAGCCTGGGAGCCTGAATGTCCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: QVWGTGLAPLGGEVV*LGLCGKPGSLNVPG Trigger: ACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTCTCCTCCCAGCGGGGCAAGCCCTGTGCCCCAGACCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR TCA 90 bp | GTGCCTTTCCCACTGCAGTGCCAGGGGATGGGCAAGAAAGACAAATaGGTAGACCCTCCGAGGGGCCCTGGCCTCCATCTCGCAGGCCCC | + |
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Preference number: 1 (lower is better) Translates to: VPFPLQCQGMGKKDK*VDPPRGPGLHLAGP Trigger: GGGGCCTGCGAGATGGAGGCCAGGGCCCCTCGGAGGGTCTACTCATTTGTCTTTCTTGCCCATCCCCTGGCACTGCAGTGGGAAAGGCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR GCA 90 bp | TGTGTTGCAGCCTCTGGCTGGATTGGCAGGTGGCACCAGCCACACTaGCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTGGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: CVAASGWIGRWHQPH*LPGQCFALCCGLEP Trigger: TGGCTCCAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCACCTGCCAATCCAGCCAGAGGCTGCAACACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | AGCCTCTGGCTGGATTGGCAGGTGGCACCAGCCACACTGCCTCCCTaGACAGTGCTTTGCTCTGTGCTGTGGCCTGGAGCCACCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: SLWLDWQVAPATLPP*TVLCSVLWPGATCL Trigger: AAGACAGGTGGCTCCAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCACCTGCCAATCCAGCCAGAGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | AGGGACTTCTCTGGAGCAGCCTGGTGGAAGTTGCCTGTACTGGCTTaGCACTATGGTGGTGCAGGCCGGCGATCCCAGCACTTAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: RDFSGAAWWKLPVLA*HYGGAGRRSQHLGG Trigger: GCCTCCTAAGTGCTGGGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | CCCGCTGGGAGGAGAAGTGGTGTGGCTAGGCTTGTGTGGGAAGCCTaGGAGCCTGAATGTCCCAGGTTCTGGAGCACACCCTATGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: PAGRRSGVARLVWEA*EPECPRFWSTPYAF Trigger: GAAGGCATAGGGTGTGCTCCAGAACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTCTCCTCCCAGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR GCA 90 bp | AGGTGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTaGTGTGGCCTGGAGCCACCTGTCTTGAGTCCAGATTTGCAGCCA | + |
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Preference number: 1 (lower is better) Translates to: RWHQPHCLPGQCFAL*CGLEPPVLSPDLQP Trigger: TGGCTGCAAATCTGGACTCAAGACAGGTGGCTCCAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR GCA 90 bp | TCGAGAGATGCAAGAGATGCTGCTGTGGTAGCAGGGCTTGAGGGCTaGAGGTGCTGTGTTGCAGCCTCTGGCTGGATTGGCAGGTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: SRDARDAAVVAGLEG*RCCVAASGWIGRWH Trigger: GTGCCACCTGCCAATCCAGCCAGAGGCTGCAACACAGCACCTGCAGCCCTCAAGCCCTGCTACCACAGCAGCATCTCTTGCATCTCTCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | GCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTGCTGTaGCCTGGAGCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGA | + |
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Preference number: 1 (lower is better) Translates to: APATLPPWTVLCSVL*PGATCLESRFAARR Trigger: TCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTCCAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR GCA 90 bp | AACACCATCTTGTCAGGGACTTCTCTGGAGCAGCCTGGTGGAAGTTaGCTGTACTGGCTTGGCACTATGGTGGTGCAGGCCGGCGATCCC | + |
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Preference number: 1 (lower is better) Translates to: NTILSGTSLEQPGGS*LYWLGTMVVQAGDP Trigger: GGGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR GCA 90 bp | CTCGCAGGCCCCACAGCAGGCAGACCTTGTGGGCAATGCATGGTCTaGATCAGGCAACTGGCAGGTTCTTACACCTGGCCCTCACAATCT | + |
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Preference number: 1 (lower is better) Translates to: LAGPTAGRPCGQCMV*IRQLAGSYTWPSQS Trigger: AGATTGTGAGGGCCAGGTGTAAGAACCTGCCAGTTGCCTGATGCAGACCATGCATTGCCCACAAGGTCTGCCTGCTGTGGGGCCTGCGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | CAAGCCAAACACCATCTTGTCAGGGACTTCTCTGGAGCAGCCTGGTaGAAGTTGCCTGTACTGGCTTGGCACTATGGTGGTGCAGGCCGG | + |
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Preference number: 1 (lower is better) Translates to: QAKHHLVRDFSGAAW*KLPVLAWHYGGAGR Trigger: CCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTGTTTGGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR TCA 90 bp | CTAGGTCCTGTCTCTGCTCCTGCCAACTGCCCAGTGACACCCTGCTaGAACCACTGTCCCCACCTCTCTCCTGCTTGGAACATAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: LGPVSAPANCPVTPC*NHCPHLSPAWNIER Trigger: CCTTTCTATGTTCCAAGCAGGAGAGAGGTGGGGACAGTGGTTTCAGCAGGGTGTCACTGGGCAGTTGGCAGGAGCAGAGACAGGACCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR TCA 90 bp | AAAGGAATCGAGAGATGCAAGAGATGCTGCTGTGGTAGCAGGGCTTaGGGGCTGCAGGTGCTGTGTTGCAGCCTCTGGCTGGATTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: KGIERCKRCCCGSRA*GLQVLCCSLWLDWQ Trigger: CTGCCAATCCAGCCAGAGGCTGCAACACAGCACCTGCAGCCCTCAAGCCCTGCTACCACAGCAGCATCTCTTGCATCTCTCGATTCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR TCA 90 bp | CTGGACAGTGCTTTGCTCTGTGCTGTGGCCTGGAGCCACCTGTCTTaGGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCCTAT | + |
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Preference number: 1 (lower is better) Translates to: LDSALLCAVAWSHLS*VQICSQEITPCIPY Trigger: ATAGGGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTCCAGGCCACAGCACAGAGCAAAGCACTGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | CTTCATCTAGCATCCCAAAAGGCTAAGAAACACACATGTGCACATTaGGCCCTGAGATCCACTCGCCCAGGTTACCCAGGACCCCAGGAC | + |
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Preference number: 1 (lower is better) Translates to: LHLASQKAKKHTCAH*ALRSTRPGYPGPQD Trigger: GTCCTGGGGTCCTGGGTAACCTGGGCGAGTGGATCTCAGGGCCCAATGTGCACATGTGTGTTTCTTAGCCTTTTGGGATGCTAGATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | ACCAGCACCCTACAAGGTGGCAGAGCTGCAGAAAGAATCGCCACGTaGAAGACAGGATTTGGACATCTCTGGATCCCAAGCCAAACACCA | + |
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Preference number: 1 (lower is better) Translates to: TSTLQGGRAAERIAT*KTGFGHLWIPSQTP Trigger: TGGTGTTTGGCTTGGGATCCAGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR TCA 90 bp | AGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCCTATCATaGGGGCTGGATCAGAACAAGCCACTAGGTCCTGTCTCTGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: SPDLQPGDHSLYSLS*GLDQNKPLGPVSAP Trigger: AGGAGCAGAGACAGGACCTAGTGGCTTGTTCTGATCCAGCCCTCATGATAGGGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR GCA 90 bp | TCCGTCTGTAGAGCAGAAAACCAGCACCCTACAAGGTGGCAGAGCTaGAGAAAGAATCGCCACGTGGAAGACAGGATTTGGACATCTCTG | + |
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Preference number: 1 (lower is better) Translates to: SVCRAENQHPTRWQS*RKNRHVEDRIWTSL Trigger: CAGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCTGGTTTTCTGCTCTACAGACGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | GCTGCAGAAAGAATCGCCACGTGGAAGACAGGATTTGGACATCTCTaGATCCCAAGCCAAACACCATCTTGTCAGGGACTTCTCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: AAERIATWKTGFGHL*IPSQTPSCQGLLWS Trigger: GCTCCAGAGAAGTCCCTGACAAGATGGTGTTTGGCTTGGGATCCAGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR GCA 90 bp | CGCCCTGCATGGACTCTCCAGTCCTCTCTCTCCTGGGTCCCATCTTaGAAAGTTTTTGACTATGCTAGCTCAGGAATTCAGGACAAGTCT | + |
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Preference number: 1 (lower is better) Translates to: RPAWTLQSSLSWVPS*KVFDYASSGIQDKS Trigger: AGACTTGTCCTGAATTCCTGAGCTAGCATAGTCAAAAACTTTGCAAGATGGGACCCAGGAGAGAGAGGACTGGAGAGTCCATGCAGGGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | GGGGCTGACTTACAGGTTCAGAGGTTTAGTCCTTTATCATCATGGTaGGAACATGGCATGAAGGCAGACATGGTGCTGGAGAAGGAGATC | + |
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Preference number: 1 (lower is better) Translates to: GADLQVQRFSPLSSW*EHGMKADMVLEKEI Trigger: GATCTCCTTCTCCAGCACCATGTCTGCCTTCATGCCATGTTCCCACCATGATGATAAAGGACTAAACCTCTGAACCTGTAAGTCAGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR TCA 90 bp | TCAGCTATCCACCTGCCTGTGTGCTGGATTGAAGGTGTGCACACTTaGATTTCTTTATACATCCTGGCCAGCATTAGCGTAACTCACCTC | + |
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Preference number: 1 (lower is better) Translates to: SAIHLPVCWIEGVHT*ISLYILASISVTHL Trigger: GAGGTGAGTTACGCTAATGCTGGCCAGGATGTATAAAGAAATTCAAGTGTGCACACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | ATGATGGCTCACAATGTCTCTAACTCCAGCTCCAGCAACTTCTTCTaGTCTCCATGGGCACCAGGTACACCTATGATACAGACAGACATT | + |
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Preference number: 1 (lower is better) Translates to: MMAHNVSNSSSSNFF*SPWAPGTPMIQTDI Trigger: AATGTCTGTCTGTATCATAGGTGTACCTGGTGCCCATGGAGACCAGAAGAAGTTGCTGGAGCTGGAGTTAGAGACATTGTGAGCCATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR TCA 90 bp | GCTCCAGCAACTTCTTCTGGTCTCCATGGGCACCAGGTACACCTATaGTACAGACAGACATTCATACAAAACACCCATCCACAGAAAATT | + |
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Preference number: 1 (lower is better) Translates to: APATSSGLHGHQVHL*YRQTFIQNTHPQKI Trigger: AATTTTCTGTGGATGGGTGTTTTGTATGAATGTCTGTCTGTATCATAGGTGTACCTGGTGCCCATGGAGACCAGAAGAAGTTGCTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | ACACTCTGCTGTTTAATGACTAAACCTAAACAGGTCTCAGGACTCTaGAGGGACACTGCACACACACAAGTGAGATTTTCCACAGGAGTA | + |
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Preference number: 1 (lower is better) Translates to: TLCCLMTKPKQVSGL*RDTAHTQVRFSTGV Trigger: TACTCCTGTGGAAAATCTCACTTGTGTGTGTGCAGTGTCCCTCCAGAGTCCTGAGACCTGTTTAGGTTTAGTCATTAAACAGCAGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CCA 90 bp | TCCTTGAATCCCTTATCTAAAAATGGGTCTGGAGAAATGGCTCAGTaGTTAAGAGCACTGGTTGCTCTTCAGAGAACCCGGGTTCAATTC | + |
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Preference number: 1 (lower is better) Translates to: SLNPLSKNGSGEMAQ*LRALVALQRTRVQF Trigger: GAATTGAACCCGGGTTCTCTGAAGAGCAACCAGTGCTCTTAACCACTGAGCCATTTCTCCAGACCCATTTTTAGATAAGGGATTCAAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CAA 90 bp | CAGGGACTTCTCTGGAGCAGCCTGGTGGAAGTTGCCTGTACTGGCTaGGCACTATGGTGGTGCAGGCCGGCGATCCCAGCACTTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QGLLWSSLVEVACTG*ALWWCRPAIPALRR Trigger: CCTCCTAAGTGCTGGGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTGCTTGTGTGGGAAGCCTaGGAGCCTGAATGTCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: WHQPHCLPGQCFALCCGLLVWEA*EPECPR Trigger: CCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAG...CAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTCCTTCTTACCCCACATaGGGCTGTCACTGTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VAPATLPPWTVLCSVLWPPSYPT*GCHCPL Trigger: CAAGGGACAGTGACAGCCTCATGTGGGGTAAGAAGG...AGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR TCA 90 bp | GTGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTCAGGGATCAGAGGACTaGGCCTTCTTACCCCACATG | + |
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Preference number: 2 (lower is better) Translates to: VAPATLPPWTVLCSVLWPQGSED*AFLPHM Trigger: CATGTGGGGTAAGAAGGCTCAGTCCTCTGATCCCTG...AGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGTTGCCTGTACTGGCTTGGCACTATGGTGGTGCAGGCCGGCGATCCCAGCAAACAGGGGACAGGGATaGTCTGACCTGCCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: EVACTGLALWWCRPAIPANRGQG*SDLPTS Trigger: AGAGGTGGGCAGGTCAGAGCATCCCTGTCCCCTGTT...TGCTGGGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR GCA 90 bp | GAAGTGGTGTGGCTAGGCTTGTGTGGGAAGCCTGGGAGCCTGAATGTCCCAGGTTTGGCACTATGGTGGTaGAGGCCGGCGATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: EVVWLGLCGKPGSLNVPGLALWW*RPAIPA Trigger: TGCTGGGATCGCCGGCCTGCACCACCATAGTGCCAA...ACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR GCA 90 bp | CATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAACAAGGCCACTGGGGCACAGGGCTTaGCCCGCTGGGAGGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: HMRPQSPPHSDTPPPTRPLGHRA*PAGRRS Trigger: ACTTCTCCTCCCAGCGGGGCAAGCCCTGTGCCCCAG...TGGCCTTGTTGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR GCA 90 bp | CATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAACAAGGCCAGCAGGGCTTGAGGGCTaGAGGTGCTGTGTTGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: HMRPQSPPHSDTPPPTRPAGLEG*RCCVAA Trigger: GGCTGCAACACAGCACCTGCAGCCCTCAAGCCCTGC...TGGCCTTGTTGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR CCA 90 bp | AGCACCCTACAAGGTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGACACATACCAGCCAGGTaGCTCTCCTTGGGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: STLQGGRAAERIATWKTGHIPAR*LSLGWA Trigger: GGCCCAGCCCAAGGAGAGCCACCTGGCTGGTATGTG...TCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR CCA 90 bp | CATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAACAAGGCCAGGCTGGATTGGCAGGTaGCACCAGCCACACTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: HMRPQSPPHSDTPPPTRPGWIGR*HQPHCL Trigger: GAGGCAGTGTGGCTGGTGCCACCTGCCAATCCAGCC...TGGCCTTGTTGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CAA 90 bp | AAACACCATCTTGTCAGGGACTTCTCTGGAGCAGCCTGGTGGAAGTaGCCTGTACTGGCTTGGCACTATGGTGGTGCAGGCCGGCGATCC | + |
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Preference number: 2 (lower is better) Translates to: KHHLVRDFSGAAWWK*PVLAWHYGGAGRRS Trigger: GGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR TCA 90 bp | GAGATTGAGCATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCACCCCACTGTGGTAGCTaGGGAGGCTTCAGCTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: EIEHMRPQSPPHSDTPPPPHCGS*GGFSCW Trigger: CCAGCAGCTGAAGCCTCCTCAGCTACCACAGTGGGG...TGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATGCTCAATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR GCA 90 bp | AGAAAGGGTACCTCGGCCTCCTTAATGGCCCTCTTACCCCGATTTCCCACCCCTCTGTCCCTTGCTTGGTaGCTTTCCCACTGCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RKGTSASLMALLPRFPTPLSLAW*LSHCSA Trigger: GGCACTGCAGTGGGAAAGGCACCAAGCAAGGGACAG...AGGGGTGGGAAATCGGGGTAAGAGGGCCATTAAGGAGGCCGAGGTACCCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR GCA 90 bp | CCAGGCTGGCTTCCAACTCAGCTATCCACCTGCCTGTGTGCTGGATTGAAGGTGCGTAACTCACCTCCCTaGCCAGCAGGGATCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PGWLPTQLSTCLCAGLKVRNSPP*PAGIRG Trigger: TCCTCTGATCCCTGCTGGGCAGGGAGGTGAGTTACG...CACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGAGTTGGAAGCCAGCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR CCA 90 bp | GAAGTGGTGTGGCTAGGCTTGTGTGGGAAGCCTGGGAGCCTGAATGTCCCAGGTCAGGTCTCAGGACTCTaGAGGGACACTGCACACACA | + |
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Preference number: 2 (lower is better) Translates to: EVVWLGLCGKPGSLNVPGQVSGL*RDTAHT Trigger: TGTGTGTGCAGTGTCCCTCCAGAGTCCTGAGACCTG...ACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR CCA 90 bp | TGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTGTTCTTCTGGTCTCCATaGGCACCAGGTACACCTATG | + |
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Preference number: 2 (lower is better) Translates to: WHQPHCLPGQCFALCCGLFFWSP*APGTPM Trigger: CATAGGTGTACCTGGTGCCCATGGAGACCAGAAGAA...CAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR CCA 90 bp | CATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAACAAGGCCAGTGGCTAGGCTTGTGTaGGAAGCCTGGGAGCCTGAA | + |
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Preference number: 2 (lower is better) Translates to: HMRPQSPPHSDTPPPTRPVARLV*EAWEPE Trigger: TTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCAC...TGGCCTTGTTGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CAA 90 bp | CCCAGTGACACCCTGCTGAAACCACTGTCCCCACCTCTCTCCTGCTaGGAACATAGAAAGGGTACCTCGGCCTCCTTAATGGCCCTCTTA | + |
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Preference number: 2 (lower is better) Translates to: PSDTLLKPLSPPLSC*EHRKGTSASLMALL Trigger: TAAGAGGGCCATTAAGGAGGCCGAGGTACCCTTTCTATGTTCCAAGCAGGAGAGAGGTGGGGACAGTGGTTTCAGCAGGGTGTCACTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR CAA 90 bp | CCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTGGAGCCACCTGTCTaGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCCTA | + |
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Preference number: 2 (lower is better) Translates to: PGQCFALCCGLEPPV*SPDLQPGDHSLYSL Trigger: TAGGGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTCCAGGCCACAGCACAGAGCAAAGCACTGTCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| 3UTR-3UTR TCA 90 bp | AGCACCCTACAAGGTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGACATGCACAAGGAGGCTaGGCTGTGGACATTCTCACC | + |
|
Preference number: 2 (lower is better) Translates to: STLQGGRAAERIATWKTGHAQGG*AVDILT Trigger: GGTGAGAATGTCCACAGCTCAGCCTCCTTGTGCATG...TCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGCTGGCTTCCAACTCAGCTATCCACCTGCCTGTGTGCTGGATTGAAGGTGTCCAGCAACTTCTTCTaGTCTCCATGGGCACCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: PGWLPTQLSTCLCAGLKVSSNFF*SPWAPG Trigger: ACCTGGTGCCCATGGAGACCAGAAGAAGTTGCTGGA...CACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGAGTTGGAAGCCAGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 90 bp | TCTTGTGAGGATGTCCTCGGACACATACCAGCCAGGTGGCTCTCCTaGGGCTGGGCCAGAATTGTAGGTAGGTCTGAGAAGCCTTCATTC | + |
|
Preference number: 2 (lower is better) Translates to: SCEDVLGHIPARWLS*GWARIVGRSEKPSF Trigger: GAATGAAGGCTTCTCAGACCTACCTACAATTCTGGCCCAGCCCAAGGAGAGCCACCTGGCTGGTATGTGTCCGAGGACATCCTCACAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR GCA 90 bp | CATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAACAAGGCCAACAAGGTGGCAGAGCTaGAGAAAGAATCGCCACGTG | + |
|
Preference number: 2 (lower is better) Translates to: HMRPQSPPHSDTPPPTRPTRWQS*RKNRHV Trigger: CACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGT...TGGCCTTGTTGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGATTGAGCATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAGCTGTCACTGTCCCTTaGTTGGTGCCTTTCCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: EIEHMRPQSPPHSDTPPPAVTVP*LVPFPL Trigger: CAGTGGGAAAGGCACCAAGCAAGGGACAGTGACAGC...TGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATGCTCAATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCCTACAAGGTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGACAAGTTCAGCCTTCATaGCTCTGTCCCCACTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: STLQGGRAAERIATWKTGQVQPS*LCPHCG Trigger: ACCACAGTGGGGACAGAGCCATGAAGGCTGAACTTG...TCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCCACACATGTGCACATTaGGCCCTGAGATCCACTCGC | + |
|
Preference number: 2 (lower is better) Translates to: EPPVLSPDLQPGDHSLYSHTCAH*ALRSTR Trigger: GCGAGTGGATCTCAGGGCCCAATGTGCACATGTGTG...GGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | CCAGGCTGGCTTCCAACTCAGCTATCCACCTGCCTGTGTGCTGGATTGAAGGTGTGCAGTGCCAGGGGATaGGCAAGAAAGACAAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: PGWLPTQLSTCLCAGLKVCSARG*ARKTNE Trigger: CTCATTTGTCTTTCTTGCCCATCCCCTGGCACTGCA...CACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGAGTTGGAAGCCAGCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR GCA 90 bp | GTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGATTTGGACATCTCTGAGGAGCCAAAGCCATaGACAAGGAGGCTGAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VAELQKESPRGRQDLDISEEPKP*TRRLSC Trigger: ACAGCTCAGCCTCCTTGTGCATGGCTTTGGCTCCTC...AGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCCTGGAGCACACCCTATaGCTTCCTTCAGGTAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: EPPVLSPDLQPGDHSLYSLEHTL*LPSGSH Trigger: GTGACTACCTGAAGGAAGGCATAGGGTGTGCTCCAG...GGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | AGCACCCTACAAGGTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGACATCCTTTCCGTCTTTaGAGGAGCCAAAGCCATGCA | + |
|
Preference number: 2 (lower is better) Translates to: STLQGGRAAERIATWKTGHPFRL*RSQSHA Trigger: TGCATGGCTTTGGCTCCTCCAAAGACGGAAAGGATG...TCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | AGAAAGGGTACCTCGGCCTCCTTAATGGCCCTCTTACCCCGATTTCCCACCCCTGGATTTGGACATCTCTaGATCCCAAGCCAAACACCA | + |
|
Preference number: 2 (lower is better) Translates to: RKGTSASLMALLPRFPTPGFGHL*IPSQTP Trigger: TGGTGTTTGGCTTGGGATCCAGAGATGTCCAAATCC...AGGGGTGGGAAATCGGGGTAAGAGGGCCATTAAGGAGGCCGAGGTACCCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 90 bp | GAAGACAGGATTTGGACATCTCTGGATCCCAAGCCAAACACCATCTaGTCAGGGACTTCTCTGGAGCAGCCTGGTGGAAGTTGCCTGTAC | + |
|
Preference number: 2 (lower is better) Translates to: EDRIWTSLDPKPNTI*SGTSLEQPGGSCLY Trigger: GTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTGTTTGGCTTGGGATCCAGAGATGTCCAAATCCTGTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGGTCTCCATGGGCACCAGGTACACCTATGATACAGACAGACATTCATACACACTCTACCTCCACATaGAGCTGGCCACTGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: FWSPWAPGTPMIQTDIHTHSTST*SWPLLG Trigger: GCCCAGCAGTGGCCAGCTCCATGTGGAGGTAGAGTG...TGTATGAATGTCTGTCTGTATCATAGGTGTACCTGGTGCCCATGGAGACCAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR TCA 90 bp | GTCACTTCCGTCTCCGTCTGTAGAGCAGAAAACCAGCACCCTACAAGGTGGCAGTGTCCTCTCAAATCTTaGCAGCTCATCTGTAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VTSVSVCRAENQHPTRWQCPLKS*QLICKW Trigger: CCACTTACAGATGAGCTGTCAAGATTTGAGAGGACA...CTGCCACCTTGTAGGGTGCTGGTTTTCTGCTCTACAGACGGAGACGGAAGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR GCA 90 bp | GAGCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCAGTATTTATACGCCCTaGATGGACTCTCCAGTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: EPPVLSPDLQPGDHSLYSSIYTP*MDSPVL Trigger: GAGGACTGGAGAGTCCATGCAGGGCGTATAAATACT...GGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | GAAGTGGTGTGGCTAGGCTTGTGTGGGAAGCCTGGGAGCCTGAATGTCCCAGGTCTGTCCTTTATTTTATaGTTAAGAGGGAGTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: EVVWLGLCGKPGSLNVPGLSFIL*LRGSVV Trigger: CACCACACTCCCTCTTAACCATAAAATAAAGGACAG...ACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR TCA 90 bp | GAGCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCAGAGGGAGTGTGGTGTaGTGTTTAAGGCATTTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EPPVLSPDLQPGDHSLYSRGSVV*CLRHFV Trigger: CACAAAATGCCTTAAACATCACACCACACTCCCTCT...GGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR GCA 90 bp | GTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGATTTGGACATCTCTAGGGATGCTCTGACCTaGCCACCTCTAAAAATAGCA | + |
|
Preference number: 2 (lower is better) Translates to: VAELQKESPRGRQDLDISRDALT*PPLKIA Trigger: TGCTATTTTTAGAGGTGGGCAGGTCAGAGCATCCCT...AGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR GCA 90 bp | AGAAAGGGTACCTCGGCCTCCTTAATGGCCCTCTTACCCCGATTTCCCACCCCTTCACAGGTCACACTCTaGTGTTTAATGACTAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: RKGTSASLMALLPRFPTPSQVTL*CLMTKP Trigger: AGGTTTAGTCATTAAACAGCAGAGTGTGACCTGTGA...AGGGGTGGGAAATCGGGGTAAGAGGGCCATTAAGGAGGCCGAGGTACCCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | TTCTGGTCTCCATGGGCACCAGGTACACCTATGATACAGACAGACATTCATACAATGTTCAGCGACAGCTaGCATTCAAGAGGGGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: FWSPWAPGTPMIQTDIHTMFSDS*HSRGAP Trigger: TGGGGCCCCTCTTGAATGCCAGCTGTCGCTGAACAT...TGTATGAATGTCTGTCTGTATCATAGGTGTACCTGGTGCCCATGGAGACCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 90 bp | GGACTCTCCAGTCCTCTCTCTCCTGGGTCCCATCTTGCAAAGTTTTaGACTATGCTAGCTCAGGAATTCAGGACAAGTCTTCTTGGATCC | + |
|
Preference number: 2 (lower is better) Translates to: GLSSPLSPGSHLAKF*TMLAQEFRTSLLGS Trigger: GGATCCAAGAAGACTTGTCCTGAATTCCTGAGCTAGCATAGTCAAAAACTTTGCAAGATGGGACCCAGGAGAGAGAGGACTGGAGAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR TCA 90 bp | CATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAACAAGGCCAGTCTTCTTGGATCCTTaGATCCCTTATCTAAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: HMRPQSPPHSDTPPPTRPVFLDP*IPYLKM Trigger: CATTTTTAGATAAGGGATTCAAGGATCCAAGAAGAC...TGGCCTTGTTGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CCA 90 bp | TGGGTCTTAGACACCGAACATTCACAGGTCACACTCTGCTGTTTAATGACTAAATGGCTCTCCTTGGGCTaGGCCAGAATTGTAGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: WVLDTEHSQVTLCCLMTKWLSLG*ARIVGR Trigger: CCTACCTACAATTCTGGCCCAGCCCAAGGAGAGCCA...TTTAGTCATTAAACAGCAGAGTGTGACCTGTGAATGTTCGGTGTCTAAGACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 90 bp | TTGACTATGCTAGCTCAGGAATTCAGGACAAGTCTTCTTGGATCCTaGAATCCCTTATCTAAAAATGGGTCTGGAGAAATGGCTCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LTMLAQEFRTSLLGS*NPLSKNGSGEMAQW Trigger: CCACTGAGCCATTTCTCCAGACCCATTTTTAGATAAGGGATTCAAGGATCCAAGAAGACTTGTCCTGAATTCCTGAGCTAGCATAGTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 90 bp | TCTGAGAAGCCTTCATTCTTAGTCCTATATGGGATGATGGCTCTGTaGGTCAATCCTGTCCTTTATTTTATGGTTAAGAGGGAGTGTGGT | + |
|
Preference number: 2 (lower is better) Translates to: SEKPSFLVLYGMMAL*VNPVLYFMVKRECG Trigger: ACCACACTCCCTCTTAACCATAAAATAAAGGACAGGATTGACCAACAGAGCCATCATCCCATATAGGACTAAGAATGAAGGCTTCTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | GGGCTGCAGGTGCTGTGTTGCAGCCTCTGGCTGGATTaGCAGGTGGCACCAGCCACACTGCCTCCCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: GLQVLCCSLWLD*QVAPATLPPWT Trigger: TGTCCAGGGAGGCAGTGTGGCTGGTGCCACCTGCCAATCCAGCCAGAGGCTGCAACACAGCACCTGCAGCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | GCCTCTGGCTGGATTGGCAGGTGGCACCAGCCACACTaGCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASGWIGRWHQPH*LPGQCFALCCG Trigger: GCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCACCTGCCAATCCAGCCAGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | GTGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTaGTCTGTGCTGTGGCCTGGAGCCACCTGTCTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: VAPATLPPWTVL*SVLWPGATCLE Trigger: CTCAAGACAGGTGGCTCCAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | GATGCTGCTGTGGTAGCAGGGCTTGAGGGCTGCAGGTaGTGTGTTGCAGCCTCTGGCTGGATTGGCAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: DAAVVAGLEGCR*CVAASGWIGRW Trigger: CCACCTGCCAATCCAGCCAGAGGCTGCAACACAGCACCTGCAGCCCTCAAGCCCTGCTACCACAGCAGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | TCTGGAGCAGCCTGGTGGAAGTTGCCTGTACTGGCTTaGCACTATGGTGGTGCAGGCCGGCGATCCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SGAAWWKLPVLA*HYGGAGRRSQH Trigger: GTGCTGGGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | CCTCCATCTCGCAGGCCCCACAGCAGGCAGACCTTGTaGGCAATGCATGGTCTGCATCAGGCAACTGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPSRRPHSRQTL*AMHGLHQATGR Trigger: CCTGCCAGTTGCCTGATGCAGACCATGCATTGCCCACAAGGTCTGCCTGCTGTGGGGCCTGCGAGATGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR TCA 72 bp | ACCTCCACATGGAGCTGGCCACTGCTGGGCCTCTTGTaGGGATGTCCTCGGACACATACCAGCCAGGTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TSTWSWPLLGLL*GCPRTHTSQVA Trigger: AGCCACCTGGCTGGTATGTGTCCGAGGACATCCTCACAAGAGGCCCAGCAGTGGCCAGCTCCATGTGGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | GCAAGAGATGCTGCTGTGGTAGCAGGGCTTGAGGGCTaGAGGTGCTGTGTTGCAGCCTCTGGCTGGATTGGC | + |
|
Preference number: 3 (lower is better) Translates to: ARDAAVVAGLEG*RCCVAASGWIG Trigger: GCCAATCCAGCCAGAGGCTGCAACACAGCACCTGCAGCCCTCAAGCCCTGCTACCACAGCAGCATCTCTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | ACTTCTCTGGAGCAGCCTGGTGGAAGTTGCCTGTACTaGCTTGGCACTATGGTGGTGCAGGCCGGCGATCCC | + |
|
Preference number: 3 (lower is better) Translates to: TSLEQPGGSCLY*LGTMVVQAGDP Trigger: GGGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | AGAAAGGGTACCTCGGCCTCCTTAATGGCCCTCTTACCCCGATTTCCCACCCCTGTGGTGTGGCTAGGCTaGTGTGGGAAGCCTGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RKGTSASLMALLPRFPTPVVWLG*CGKPGS Trigger: GCTCCCAGGCTTCCCACACAAGCCTAGCCACACCAC...AGGGGTGGGAAATCGGGGTAAGAGGGCCATTAAGGAGGCCGAGGTACCCTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCTCTGGGGCACAGGGCTaGCCCCGCTGGGAGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: EPPVLSPDLQPGDHSLYSSGAQG*PRWEEK Trigger: CTTCTCCTCCCAGCGGGGCAAGCCCTGTGCCCCAGA...GGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | CCCACAGCAGGCAGACCTTGTGGGCAATGCATGGTCTaGATCAGGCAACTGGCAGGTTCTTACACCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PTAGRPCGQCMV*IRQLAGSYTWP Trigger: GGGCCAGGTGTAAGAACCTGCCAGTTGCCTGATGCAGACCATGCATTGCCCACAAGGTCTGCCTGCTGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTTGCCTGTACTGGCTTGGCACTATGGTGGTGCAGGCCGGCGATCCCAGCAACACACATGTGCACATaGGGCCCTGAGATCCACTCG | + |
|
Preference number: 3 (lower is better) Translates to: EVACTGLALWWCRPAIPATHMCT*GPEIHS Trigger: CGAGTGGATCTCAGGGCCCAATGTGCACATGTGTGT...TGCTGGGATCGCCGGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | TTGTCAGGGACTTCTCTGGAGCAGCCTGGTGGAAGTTaGCTGTACTGGCTTGGCACTATGGTGGTGCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSGTSLEQPGGS*LYWLGTMVVQA Trigger: GGCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | GCAAGCACTCTACCTCCACATGGAGCTGGCCACTGCTaGGCCTCTTGTGAGGATGTCCTCGGACACATACCA | + |
|
Preference number: 3 (lower is better) Translates to: ASTLPPHGAGHC*ASCEDVLGHIP Trigger: TGGTATGTGTCCGAGGACATCCTCACAAGAGGCCCAGCAGTGGCCAGCTCCATGTGGAGGTAGAGTGCTTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | CAGGCCCCACAGCAGGCAGACCTTGTGGGCAATGCATaGTCTGCATCAGGCAACTGGCAGGTTCTTACACCT | + |
|
Preference number: 3 (lower is better) Translates to: QAPQQADLVGNA*SASGNWQVLTP Trigger: AGGTGTAAGAACCTGCCAGTTGCCTGATGCAGACCATGCATTGCCCACAAGGTCTGCCTGCTGTGGGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | GAGATTGAGCATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAGCCAGGTGGCTCTCCTaGGGCTGGGCCAGAATTGTA | + |
|
Preference number: 3 (lower is better) Translates to: EIEHMRPQSPPHSDTPPPARWLS*GWARIV Trigger: TACAATTCTGGCCCAGCCCAAGGAGAGCCACCTGGC...TGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATGCTCAATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR TCA 72 bp | AGCAGGGATCAGAGGACTGAGCCTTCTTACCCCACATaGGGCTGTCACTGTCCCTTGCTTGGTGCCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: SRDQRTEPSYPT*GCHCPLLGAFP Trigger: GGGAAAGGCACCAAGCAAGGGACAGTGACAGCCTCATGTGGGGTAAGAAGGCTCAGTCCTCTGATCCCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | AGGGCTGGATCAGAACAAGCCACTAGGTCCTGTCTCTaGTCCTGCCAACTGCCCAGTGACACCCTGCTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: RAGSEQATRSCL*SCQLPSDTLLK Trigger: TTTCAGCAGGGTGTCACTGGGCAGTTGGCAGGAGCAGAGACAGGACCTAGTGGCTTGTTCTGATCCAGCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | TCTTGTGAGGATGTCCTCGGACACATACCAGCCAGGTaGCTCTCCTTGGGCTGGGCCAGAATTGTAGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCEDVLGHIPAR*LSLGWARIVGR Trigger: CCTACCTACAATTCTGGCCCAGCCCAAGGAGAGCCACCTGGCTGGTATGTGTCCGAGGACATCCTCACAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCACCCTACAAGGTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGAGTTCCCTTCCAGGGGTaGGTCAAAGCCCATCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: STLQGGRAAERIATWKTGVPFQG*VKAHPF Trigger: GAAAGGATGGGCTTTGACCAACCCCTGGAAGGGAAC...TCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | GAAGTGGTGTGGCTAGGCTTGTGTGGGAAGCCTGGGAGCCTGAATGTCCCAGGTAAGCCAAACACCATCTaGTCAGGGACTTCTCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EVVWLGLCGKPGSLNVPGKPNTI*SGTSLE Trigger: CTCCAGAGAAGTCCCTGACAAGATGGTGTTTGGCTT...ACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR TCA 72 bp | AAAAGGCTAAGAAACACACATGTGCACATTGGGCCCTaGGATCCACTCGCCCAGGTTACCCAGGACCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KRLRNTHVHIGP*DPLAQVTQDPR Trigger: CCTGGGGTCCTGGGTAACCTGGGCGAGTGGATCTCAGGGCCCAATGTGCACATGTGTGTTTCTTAGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | CACCATCTTGTCAGGGACTTCTCTGGAGCAGCCTGGTaGAAGTTGCCTGTACTGGCTTGGCACTATGGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HHLVRDFSGAAW*KLPVLAWHYGG Trigger: ACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | GACCTTGTGGGCAATGCATGGTCTGCATCAGGCAACTaGCAGGTTCTTACACCTGGCCCTCACAATCTCACC | + |
|
Preference number: 3 (lower is better) Translates to: DLVGNAWSASGN*QVLTPGPHNLT Trigger: GGTGAGATTGTGAGGGCCAGGTGTAAGAACCTGCCAGTTGCCTGATGCAGACCATGCATTGCCCACAAGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | GCATCCCAAAAGGCTAAGAAACACACATGTGCACATTaGGCCCTGAGATCCACTCGCCCAGGTTACCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: ASQKAKKHTCAH*ALRSTRPGYPG Trigger: TCCTGGGTAACCTGGGCGAGTGGATCTCAGGGCCCAATGTGCACATGTGTGTTTCTTAGCCTTTTGGGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | TCCGTCTGTAGAGCAGAAAACCAGCACCCTACAAGGTaGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SVCRAENQHPTR*QSCRKNRHVED Trigger: GTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCTGGTTTTCTGCTCTACAGACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR TCA 72 bp | TTGCAGCCAGGAGATCACTCCCTGTATTCCCTATCATaGGGGCTGGATCAGAACAAGCCACTAGGTCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LQPGDHSLYSLS*GLDQNKPLGPV Trigger: GACAGGACCTAGTGGCTTGTTCTGATCCAGCCCTCATGATAGGGAATACAGGGAGTGATCTCCTGGCTGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | ACGGTGGTATCAACAGGGGACAGGGATGCTCTGACCTaGCCACCTCTAAAAATAGCAAGCACTCTACCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TVVSTGDRDALT*PPLKIASTLPP Trigger: TGGAGGTAGAGTGCTTGCTATTTTTAGAGGTGGGCAGGTCAGAGCATCCCTGTCCCCTGTTGATACCACCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | CACTCAAAGGACGGTGGTATCAACAGGGGACAGGGATaGTCTGACCTGCCCACCTCTAAAAATAGCAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HSKDGGINRGQG*SDLPTSKNSKH Trigger: GTGCTTGCTATTTTTAGAGGTGGGCAGGTCAGAGCATCCCTGTCCCCTGTTGATACCACCGTCCTTTGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | AGAGCAGAAAACCAGCACCCTACAAGGTGGCAGAGCTaGAGAAAGAATCGCCACGTGGAAGACAGGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: RAENQHPTRWQS*RKNRHVEDRIW Trigger: CCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAGGGTGCTGGTTTTCTGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | CAAGAGCAAAGGTTTCAACTCACCACCAGAGGGCAGTaGTATTCACTCCCAGAACACCAGCTGTGTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QEQRFQLTTRGQ*YSLPEHQLCEA Trigger: AGCCTCACACAGCTGGTGTTCTGGGAGTGAATAGCACTGCCCTCTGGTGGTGAGTTGAAACCTTTGCTCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | AAACACCATCTTGTCAGGGACTTCTCTGGAGCAGCCTaGTGGAAGTTGCCTGTACTGGCTTGGCACTATGGT | + |
|
Preference number: 3 (lower is better) Translates to: KHHLVRDFSGAA*WKLPVLAWHYG Trigger: ACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | CTACAAGGTGGCAGAGCTGCAGAAAGAATCGCCACGTaGAAGACAGGATTTGGACATCTCTGGATCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQGGRAAERIAT*KTGFGHLWIPS Trigger: GCTTGGGATCCAGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCACCTTGTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | ATGGTCTGCATCAGGCAACTGGCAGGTTCTTACACCTaGCCCTCACAATCTCACCTTCCTGAGAGGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: MVCIRQLAGSYT*PSQSHLPERKR Trigger: TCTTTTCCTCTCAGGAAGGTGAGATTGTGAGGGCCAGGTGTAAGAACCTGCCAGTTGCCTGATGCAGACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | GCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCCTCTGATTTCTTTGCTTTaGAGACAAGGACTCACTGGG | + |
|
Preference number: 3 (lower is better) Translates to: ATCLESRFAARRSLPVFPLISLL*RQGLTG Trigger: CCCAGTGAGTCCTTGTCTCAAAAGCAAAGAAATCAG...AGGGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | GTCTGGAGAAATGGCTCAGTGGTTAAGAGCACTGGTTaGTCTTCAGAGAACCCGGGTTCAATTCCCAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: VWRNGSVVKSTG*SSENPGSIPSI Trigger: GATACTGGGAATTGAACCCGGGTTCTCTGAAGAGCAACCAGTGCTCTTAACCACTGAGCCATTTCTCCAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | AGAATCGCCACGTGGAAGACAGGATTTGGACATCTCTaGATCCCAAGCCAAACACCATCTTGTCAGGGACTT | + |
|
Preference number: 3 (lower is better) Translates to: RIATWKTGFGHL*IPSQTPSCQGL Trigger: AAGTCCCTGACAAGATGGTGTTTGGCTTGGGATCCAGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | AGCTGCAGAAAGAATCGCCACGTGGAAGACAGGATTTaGACATCTCTGGATCCCAAGCCAAACACCATCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SCRKNRHVEDRI*TSLDPKPNTIL Trigger: CAAGATGGTGTTTGGCTTGGGATCCAGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR GCA 72 bp | CAGCTATCCACCTGCCTGTGTGCTGGATTGAAGGTGTaGACACTTGAATTTCTTTATACATCCTGGCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QLSTCLCAGLKV*TLEFLYTSWPA Trigger: TGCTGGCCAGGATGTATAAAGAAATTCAAGTGTGCACACCTTCAATCCAGCACACAGGCAGGTGGATAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR TCA 72 bp | CACCTGCCTGTGTGCTGGATTGAAGGTGTGCACACTTaGATTTCTTTATACATCCTGGCCAGCATTAGCGTA | + |
|
Preference number: 3 (lower is better) Translates to: HLPVCWIEGVHT*ISLYILASISV Trigger: TACGCTAATGCTGGCCAGGATGTATAAAGAAATTCAAGTGTGCACACCTTCAATCCAGCACACAGGCAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | TTACAGGTTCAGAGGTTTAGTCCTTTATCATCATGGTaGGAACATGGCATGAAGGCAGACATGGTGCTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LQVQRFSPLSSW*EHGMKADMVLE Trigger: CTCCAGCACCATGTCTGCCTTCATGCCATGTTCCCACCATGATGATAAAGGACTAAACCTCTGAACCTGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CCA 72 bp | GACTTACAGGTTCAGAGGTTTAGTCCTTTATCATCATaGTGGGAACATGGCATGAAGGCAGACATGGTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: DLQVQRFSPLSS*WEHGMKADMVL Trigger: CAGCACCATGTCTGCCTTCATGCCATGTTCCCACCATGATGATAAAGGACTAAACCTCTGAACCTGTAAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGATGAGCATTCCAAGAGCAAAGGTTTCAACTCACCACCAGAGGGCAGTGCTAGGGCTAAGTGAGACCTaGTCTCATAAAAGTAAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QMSIPRAKVSTHHQRAVLGLSET*SHKSKT Trigger: TGTTTTACTTTTATGAGACAAGGTCTCACTTAGCCC...TAGCACTGCCCTCTGGTGGTGAGTTGAAACCTTTGCTCTTGGAATGCTCATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR TCA 72 bp | ACTTCTTCTGGTCTCCATGGGCACCAGGTACACCTATaGTACAGACAGACATTCATACAAAACACCCATCCA | + |
|
Preference number: 3 (lower is better) Translates to: TSSGLHGHQVHL*YRQTFIQNTHP Trigger: TGGATGGGTGTTTTGTATGAATGTCTGTCTGTATCATAGGTGTACCTGGTGCCCATGGAGACCAGAAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR TCA 72 bp | TTCCAACTCAGCTATCCACCTGCCTGTGTGCTGGATTaGAGGTGTGCACACTTGAATTTCTTTATACATCCT | + |
|
Preference number: 3 (lower is better) Translates to: FQLSYPPACVLD*RCAHLNFFIHP Trigger: AGGATGTATAAAGAAATTCAAGTGTGCACACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGAGTTGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | CTTGCCCCGCTGGGAGGAGAAGTGGTGTGGCTAGGCTaGTGTGGGAAGCCTGGGAGCCTGAATGTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAPLGGEVVWLG*CGKPGSLNVPG Trigger: ACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTCTCCTCCCAGCGGGGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | TGGCCTCCATCTCGCAGGCCCCACAGCAGGCAGACCTaGTGGGCAATGCATGGTCTGCATCAGGCAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: WPPSRRPHSRQT*WAMHGLHQATG Trigger: GCCAGTTGCCTGATGCAGACCATGCATTGCCCACAAGGTCTGCCTGCTGTGGGGCCTGCGAGATGGAGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR CCA 90 bp | TGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTGTTCCGCAGCCTCATCTaGCCTGTGATGACAGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WHQPHCLPGQCFALCCGLFRSLI*PVMTAT Trigger: GGTGGCTGTCATCACAGGCCAGATGAGGCTGCGGAA...CAGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR GCA 90 bp | CATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAACAAGGCCAGGCGTGGGTTCAGCTTaGCCAGGTAGGCCACGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HMRPQSPPHSDTPPPTRPGVGSA*PGRPRC Trigger: ACACCGTGGCCTACCTGGGCAAGCTGAACCCACGCC...TGGCCTTGTTGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCACCAGCCACACTGCCTCCCTGGACAGTGCTTTGCTCTGTGCTGTGGCCTAGGCGATCAGAGGGTTaGGTCCCAGGAATGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VAPATLPPWTVLCSVLWPRRSEG*VPGMST Trigger: TGTACTCATTCCTGGGACCCAACCCTCTGATCGCCT...AGGCCACAGCACAGAGCAAAGCACTGTCCAGGGAGGCAGTGTGGCTGGTGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | CTTGTCAGGGACTTCTCTGGAGCAGCCTGGTGGAAGTaGCCTGTACTGGCTTGGCACTATGGTGGTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LVRDFSGAAWWK*PVLAWHYGGAG Trigger: GCCTGCACCACCATAGTGCCAAGCCAGTACAGGCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGGCTTCCAACTCAGCTATCCACCTGCCTGTGTGCTGGATTGAAGGTGACCTCCCAGAGGATCTaGAGGGCCATGGAGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGWLPTQLSTCLCAGLKVTSQRI*RAMEKQ Trigger: CTGTTTCTCCATGGCCCTGCAGATCCTCTGGGAGGT...CACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGAGTTGGAAGCCAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | GATGTCCTCGGACACATACCAGCCAGGTGGCTCTCCTaGGGCTGGGCCAGAATTGTAGGTAGGTCTGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DVLGHIPARWLS*GWARIVGRSEK Trigger: CTTCTCAGACCTACCTACAATTCTGGCCCAGCCCAAGGAGAGCCACCTGGCTGGTATGTGTCCGAGGACATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | CTTCCAGGGGTTGGTCAAAGCCCATCCTTTCCGTCTTaGGAGGAGCCAAAGCCATGCACAAGGAGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPGVGQSPSFPS*EEPKPCTRRLS Trigger: GCTCAGCCTCCTTGTGCATGGCTTTGGCTCCTCCAAAGACGGAAAGGATGGGCTTTGACCAACCCCTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR CCA 90 bp | GTGGCAGAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGATTTGGACATCTCTGCGCATCCTCGGGGTTaGCAAAAGCCTTCTTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VAELQKESPRGRQDLDISAHPRG*QKPSSA Trigger: TGCGGAAGAAGGCTTTTGCCAACCCCGAGGATGCGC...AGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTCTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | TGCTGTGGCCTGGAGCCACCTGTCTTGAGTCCAGATTaGCAGCCAGGAGATCACTCCCTGTATTCCCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: CCGLEPPVLSPD*QPGDHSLYSLS Trigger: TGATAGGGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGCTCCAGGCCACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAACACCATCTTGTCAGGGACTTCTCTGGAGCAGCCTGGTGGAAGTTGCGTACCACACGGCCTGTaGGGACAACGAGGAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPNTILSGTSLEQPGGSCVPHGL*GQRGNV Trigger: TACATTTCCTCGTTGTCCTCACAGGCCGTGTGGTAC...GCAACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTGTTTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | ACAGATGCTGAAGAAGCCAAAGTTCCCTTCCAGGGGTaGGTCAAAGCCCATCCTTTCCGTCTTTGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDAEEAKVPFQG*VKAHPFRLWRS Trigger: GCTCCTCCAAAGACGGAAAGGATGGGCTTTGACCAACCCCTGGAAGGGAACTTTGGCTTCTTCAGCATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR CCA 90 bp | CAGATGAGCATTCCAAGAGCAAAGGTTTCAACTCACCACCAGAGGGCAGTGCTAGGATCTGCAGGGCCATaGAGAAACAGGAGAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMSIPRAKVSTHHQRAVLGSAGP*RNRRTG Trigger: CCCAGTTCTCCTGTTTCTCCATGGCCCTGCAGATCC...TAGCACTGCCCTCTGGTGGTGAGTTGAAACCTTTGCTCTTGGAATGCTCATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | ATTTGGACATCTCTGGATCCCAAGCCAAACACCATCTaGTCAGGGACTTCTCTGGAGCAGCCTGGTGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IWTSLDPKPNTI*SGTSLEQPGGS Trigger: ACTTCCACCAGGCTGCTCCAGAGAAGTCCCTGACAAGATGGTGTTTGGCTTGGGATCCAGAGATGTCCAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | GAGCTGCAGAAAGAATCGCCACGTGGAAGACAGGATTaGGACATCTCTGGATCCCAAGCCAAACACCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ELQKESPRGRQD*DISGSQAKHHL Trigger: AAGATGGTGTTTGGCTTGGGATCCAGAGATGTCCAAATCCTGTCTTCCACGTGGCGATTCTTTCTGCAGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | AGTCCTCTCTCTCCTGGGTCCCATCTTGCAAAGTTTTaGACTATGCTAGCTCAGGAATTCAGGACAAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLSPGSHLAKF*TMLAQEFRTSL Trigger: AAGACTTGTCCTGAATTCCTGAGCTAGCATAGTCAAAAACTTTGCAAGATGGGACCCAGGAGAGAGAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | CTTCCAACTCAGCTATCCACCTGCCTGTGTGCTGGATaGAAGGTGTGCACACTTGAATTTCTTTATACATCC | + |
|
Preference number: 4 (lower is better) Translates to: LPTQLSTCLCAG*KVCTLEFLYTS Trigger: GGATGTATAAAGAAATTCAAGTGTGCACACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGAGTTGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| 3UTR CAA 72 bp | CTAGCTCAGGAATTCAGGACAAGTCTTCTTGGATCCTaGAATCCCTTATCTAAAAATGGGTCTGGAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LAQEFRTSLLGS*NPLSKNGSGEM Trigger: CATTTCTCCAGACCCATTTTTAGATAAGGGATTCAAGGATCCAAGAAGACTTGTCCTGAATTCCTGAGCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS CCA 90 bp | GAAACAGGAGAACTGGGCCAGGACATAGGCCCCGGAGCGAAGGCGTaGGTTCAGCTTGCCCAGGTAGGCCACGGTGTGTACCACACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: ETGELGQDIGPGAKA*VQLAQVGHGVYHTA Trigger: GGCCGTGTGGTACACACCGTGGCCTACCTGGGCAAGCTGAACCCACGCCTTCGCTCCGGGGCCTATGTCCTGGCCCAGTTCTCCTGTTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR CAA 90 bp | GAAGTGGTGTGGCTAGGCTTGTGTGGGAAGCCTGGGAGCCTGAATGTCCCAGGTAGCGCATCCTCGGGGTaGGCAAAAGCCTTCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: EVVWLGLCGKPGSLNVPGSASSG*AKAFFR Trigger: GCGGAAGAAGGCTTTTGCCAACCCCGAGGATGCGCT...ACCTGGGACATTCAGGCTCCCAGGCTTCCCACACAAGCCTAGCCACACCACTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS TCA 90 bp | GGTTCAGCTTGCCCAGGTAGGCCACGGTGTGTACCACACGGCCTGTaGGGACAACGAGGAAATGTATCCAGGCGATCAGAGGGTTGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSACPGRPRCVPHGL*GQRGNVSRRSEGWV Trigger: GACCCAACCCTCTGATCGCCTGGATACATTTCCTCGTTGTCCTCACAGGCCGTGTGGTACACACCGTGGCCTACCTGGGCAAGCTGAACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS TCA 90 bp | GGAAGAGGAAAGGATAGATTGTCTCCATGTCGTTGCGGTGGGCTCTaGGGCAGCGCTCCACATCTGGGTCACTCCTGTAATACTGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGKDRLSPCRCGGL*GSAPHLGHSCNTGG Trigger: GCCTCCAGTATTACAGGAGTGACCCAGATGTGGAGCGCTGCCTCAGAGCCCACCGCAACGACATGGAGACAATCTATCCTTTCCTCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR CAA 90 bp | GCCACCTGTCTTGAGTCCAGATTTGCAGCCAGGAGATCACTCCCTGTATTCCCTGCCACCGCGTACATCTaGATGACCAGCAGTGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ATCLESRFAARRSLPVFPATAYI*MTSSVL Trigger: CAGCACACTGCTGGTCATCAAGATGTACGCGGTGGC...AGGGAATACAGGGAGTGATCTCCTGGCTGCAAATCTGGACTCAAGACAGGTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
||
| CDS-3UTR CAA 90 bp | GAGATTGAGCATATGAGACCCCAAAGCCCACCTCACAGTGACACACCACCTCCAATTGTCTCCATGTCGTaGCGGTGGGCTCTGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EIEHMRPQSPPHSDTPPPIVSMS*RWALRQ Trigger: CTGCCTCAGAGCCCACCGCAACGACATGGAGACAAT...TGGAGGTGGTGTGTCACTGTGAGGTGGGCTTTGGGGTCTCATATGCTCAATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS-3UTR CAA 90 bp | CCAGGCTGGCTTCCAACTCAGCTATCCACCTGCCTGTGTGCTGGATTGAAGGTGAGAGGAAAGGATAGATaGTCTCCATGTCGTTGCGGT | + |
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Preference number: 5 (lower is better) Translates to: PGWLPTQLSTCLCAGLKVRGKDR*SPCRCG Trigger: ACCGCAACGACATGGAGACAATCTATCCTTTCCTCT...CACCTTCAATCCAGCACACAGGCAGGTGGATAGCTGAGTTGGAAGCCAGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS TCA 90 bp | AACGAGGAAATGTATCCAGGCGATCAGAGGGTTGGGTCCCAGGAATaGGTACACGAAGCCGAGGAAGAGGAAAGGATAGATTGTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: NEEMYPGDQRVGSQE*VHEAEEEERIDCLH Trigger: ATGGAGACAATCTATCCTTTCCTCTTCCTCGGCTTCGTGTACTCATTCCTGGGACCCAACCCTCTGATCGCCTGGATACATTTCCTCGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS GCA 72 bp | GGACATAGGCCCCGGAGCGAAGGCGTGGGTTCAGCTTaGCCAGGTAGGCCACGGTGTGTACCACACGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GHRPRSEGVGSA*PGRPRCVPHGL Trigger: CAGGCCGTGTGGTACACACCGTGGCCTACCTGGGCAAGCTGAACCCACGCCTTCGCTCCGGGGCCTATGTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS CCA 72 bp | GAACTGGGCCAGGACATAGGCCCCGGAGCGAAGGCGTaGGTTCAGCTTGCCCAGGTAGGCCACGGTGTGTAC | + |
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Preference number: 6 (lower is better) Translates to: ELGQDIGPGAKA*VQLAQVGHGVY Trigger: GTACACACCGTGGCCTACCTGGGCAAGCTGAACCCACGCCTTCGCTCCGGGGCCTATGTCCTGGCCCAGTTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS CAA 90 bp | TTCCGCAGCCTCATCTGGCCTGTGATGACAGCCACCGCGTACATCTaGATGACCAGCAGTGTGCTGCAGAGCAGAAAGGCCGGGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: FRSLIWPVMTATAYI*MTSSVLQSRKAGST Trigger: GGTGCTCCCGGCCTTTCTGCTCTGCAGCACACTGCTGGTCATCAAGATGTACGCGGTGGCTGTCATCACAGGCCAGATGAGGCTGCGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS CCA 72 bp | GTCGTTGCGGTGGGCTCTGAGGCAGCGCTCCACATCTaGGTCACTCCTGTAATACTGGAGGCCTCCACGTTT | + |
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Preference number: 6 (lower is better) Translates to: VVAVGSEAALHI*VTPVILEASTF Trigger: AAACGTGGAGGCCTCCAGTATTACAGGAGTGACCCAGATGTGGAGCGCTGCCTCAGAGCCCACCGCAACGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS TCA 72 bp | TGCCCAGGTAGGCCACGGTGTGTACCACACGGCCTGTaGGGACAACGAGGAAATGTATCCAGGCGATCAGAG | + |
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Preference number: 6 (lower is better) Translates to: CPGRPRCVPHGL*GQRGNVSRRSE Trigger: CTCTGATCGCCTGGATACATTTCCTCGTTGTCCTCACAGGCCGTGTGGTACACACCGTGGCCTACCTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS CCA 72 bp | TCGGGGTTGGCAAAAGCCTTCTTCCGCAGCCTCATCTaGCCTGTGATGACAGCCACCGCGTACATCTTGATG | + |
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Preference number: 6 (lower is better) Translates to: SGLAKAFFRSLI*PVMTATAYILM Trigger: CATCAAGATGTACGCGGTGGCTGTCATCACAGGCCAGATGAGGCTGCGGAAGAAGGCTTTTGCCAACCCCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS CAA 72 bp | CTCATCTGGCCTGTGATGACAGCCACCGCGTACATCTaGATGACCAGCAGTGTGCTGCAGAGCAGAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LIWPVMTATAYI*MTSSVLQSRKA Trigger: GGCCTTTCTGCTCTGCAGCACACTGCTGGTCATCAAGATGTACGCGGTGGCTGTCATCACAGGCCAGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS TCA 72 bp | AAGGATAGATTGTCTCCATGTCGTTGCGGTGGGCTCTaGGGCAGCGCTCCACATCTGGGTCACTCCTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: KDRLSPCRCGGL*GSAPHLGHSCN Trigger: ATTACAGGAGTGACCCAGATGTGGAGCGCTGCCTCAGAGCCCACCGCAACGACATGGAGACAATCTATCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS CAA 72 bp | AGGACAACGAGGAAATGTATCCAGGCGATCAGAGGGTaGGGTCCCAGGAATGAGTACACGAAGCCGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RTTRKCIQAIRG*GPRNEYTKPRK Trigger: CTTCCTCGGCTTCGTGTACTCATTCCTGGGACCCAACCCTCTGATCGCCTGGATACATTTCCTCGTTGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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| CDS TCA 72 bp | ATGTATCCAGGCGATCAGAGGGTTGGGTCCCAGGAATaGGTACACGAAGCCGAGGAAGAGGAAAGGATAGAT | + |
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Preference number: 6 (lower is better) Translates to: MYPGDQRVGSQE*VHEAEEEERID Trigger: ATCTATCCTTTCCTCTTCCTCGGCTTCGTGTACTCATTCCTGGGACCCAACCCTCTGATCGCCTGGATACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102852.6 |
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