Pregenerated sensors for PTGER4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039942Ensembl transcript IDs: ENSMUST00000047379.15, ENSMUST00000120563.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCTaGGAGTTACACGAAACTGTCAGTGTCTCTCGACACACGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: AISLRKLLQTQVQYS*ELHETVSVSRHTQQ Trigger: CTGTTGCGTGTGTCGAGAGACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR TCA 90 bp | ATTCACAAGGACACGTTAAGCAACAGGACATGCTTGCTATTTCTCTaGGAAAGCTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: IHKDTLSNRTCLLFL*ESSSKHRYSIPGSY Trigger: GTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTCCTGTTGCTTAACGTGTCCTTGTGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCCTCAGTCTGCAGCCTTaGAGAGCCCTCAGGAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: LLQTQVQYSWELHETVSVLSLQP*RALRSS Trigger: CGAGCTCCTGAGGGCTCTCCAAGGCTGCAGACTGAG...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTTCAAGGACCTCAGTCTaGAGCCTTGGAGAGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSKHRYSIPGSYTKLSVSSRTSV*SLGEPS Trigger: TGAGGGCTCTCCAAGGCTGCAGACTGAGGTCCTTGA...AGACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR CCA 90 bp | ATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATGTGTCTCAGTCTGCAGCCTTaGAGAGCCCTCAGGAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: ITSTILAGYIGRRGHIMCLSLQP*RALRSS Trigger: CGAGCTCCTGAGGGCTCTCCAAGGCTGCAGACTGAG...ACACATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACAGGACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACACGAGTCACATCAGAATaGCAGCCAATGTGCTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: ATGHACYFSEKAPPNTGTRVTSE*QPMCFK Trigger: CTTGAAGCACATTGGCTGTCATTCTGATGTGACTCG...TGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTCCTGTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGACCCCTGGTATGTGCCAAATAGAAAGCTCTTTTGCTATGACAATAGCGTACGAGTCACATCAGAATaGCAGCCAATGTGCTTCAAG | + |
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Preference number: 2 (lower is better) Translates to: LDPWYVPNRKLFCYDNSVRVTSE*QPMCFK Trigger: CTTGAAGCACATTGGCTGTCATTCTGATGTGACTCG...TACGCTATTGTCATAGCAAAAGAGCTTTCTATTTGGCACATACCAGGGGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATGTGTTCAAGGACCTCAGTCTaGAGCCTTGGAGAGCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: ITSTILAGYIGRRGHIMCSRTSV*SLGEPS Trigger: TGAGGGCTCTCCAAGGCTGCAGACTGAGGTCCTTGA...ACACATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR GCA 90 bp | GACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCCTGCCAAGTTGCAACTaGAATCTCGAGTCACATCAG | + |
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Preference number: 2 (lower is better) Translates to: DMLAISLRKLLQTQVQYSLPSCN*NLESHQ Trigger: CTGATGTGACTCGAGATTGCAGTTGCAACTTGGCAG...GGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR CAA 90 bp | AGAGGACACCACTGCAGAGAGCCAGCTGTGTCTCTTTCTGCAAAGTaGTCTTTCTCTTTAAGTTTTAAAGGATGCTGTCGGACATTCTGT | + |
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Preference number: 2 (lower is better) Translates to: RGHHCREPAVSLSAK*SFSLSFKGCCRTFC Trigger: ACAGAATGTCCGACAGCATCCTTTAAAACTTAAAGAGAAAGACAACTTTGCAGAAAGAGACACAGCTGGCTCTCTGCAGTGGTGTCCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACAGGACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACATGTGGGGACAAAGGTTaGAAATATTTACCAGCAATG | + |
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Preference number: 2 (lower is better) Translates to: ATGHACYFSEKAPPNTGTCGDKG*KYLPAM Trigger: CATTGCTGGTAAATATTTTCAACCTTTGTCCCCACA...TGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTCCTGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR CCA 90 bp | GACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCATCGACAATATTAGCTaGTTATATTGGCAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: DMLAISLRKLLQTQVQYSIDNIS*LYWQER Trigger: CCTCTCCTGCCAATATAACCAGCTAATATTGTCGAT...GGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAACCAAGCAATTCACAAGGACACGTTAAGCAACAGGACATGCTTGCTATTTTGTCGGACATTCTGTTaGACAAGTAAAACTACACAC | + |
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Preference number: 2 (lower is better) Translates to: QNQAIHKDTLSNRTCLLFCRTFC*TSKTTH Trigger: GTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACA...AAATAGCAAGCATGTCCTGTTGCTTAACGTGTCCTTGTGAATTGCTTGGTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR GCA 90 bp | ATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATGTGTTGGACCCCTGGTATGTaGCAAATAGAAAGCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: ITSTILAGYIGRRGHIMCWTPGM*QIESSF Trigger: AAAAGAGCTTTCTATTTGGCACATACCAGGGGTCCA...ACACATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR GCA 72 bp | ATGTGCTTCAAGCCTGGGCACTCAAGGACCTCAGTCTaGAGCCTTGGAGAGCCCTCAGGAGCTCGCCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: MCFKPGHSRTSV*SLGEPSGARLF Trigger: GAACAGGCGAGCTCCTGAGGGCTCTCCAAGGCTGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGAAGCACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR GCA 72 bp | AGTGTCTCTCGACACACGCAACAGAGAGGACACCACTaGAGAGAGCCAGCTGTGTCTCTTTCTGCAAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: SVSRHTQQRGHH*REPAVSLSAKL Trigger: CAACTTTGCAGAAAGAGACACAGCTGGCTCTCTGCAGTGGTGTCCTCTCTGTTGCGTGTGTCGAGAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR CCA 72 bp | AGTCACATCAGAATGACAGCCAATGTGCTTCAAGCCTaGGCACTCAAGGACCTCAGTCTGCAGCCTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SHIRMTANVLQA*ALKDLSLQPWR Trigger: TCTCCAAGGCTGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTGATGTGACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR CAA 90 bp | GACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCCCTCAGTCTGCAGCCTaGGAGAGCCCTCAGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: DMLAISLRKLLQTQVQYSPQSAA*ESPQEL Trigger: GAGCTCCTGAGGGCTCTCCAAGGCTGCAGACTGAGG...GGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR TCA 72 bp | GCCAAGTTGCAACTGCAATCTCGAGTCACATCAGAATaGCAGCCAATGTGCTTCAAGCCTGGGCACTCAAGG | + |
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Preference number: 3 (lower is better) Translates to: AKLQLQSRVTSE*QPMCFKPGHSR Trigger: CCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTGATGTGACTCGAGATTGCAGTTGCAACTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGACCTCAGTCTGCAGCCTaGGAGAGCCCTCAGGAGCTC | + |
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Preference number: 3 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGPQSAA*ESPQEL Trigger: GAGCTCCTGAGGGCTCTCCAAGGCTGCAGACTGAGG...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR-3UTR CAA 90 bp | TCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTTGCTATACACTTCCCTaGTGGGTAGCTAGAGACCTA | + |
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Preference number: 3 (lower is better) Translates to: SSKHRYSIPGSYTKLSVSCYTLP*WVARDL Trigger: TAGGTCTCTAGCTACCCACAAGGGAAGTGTATAGCA...AGACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| 3UTR CAA 72 bp | TCAAGCCTGGGCACTCAAGGACCTCAGTCTGCAGCCTaGGAGAGCCCTCAGGAGCTCGCCTGTTCTCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: SSLGTQGPQSAA*ESPQELACSLV Trigger: CACTAGAGAACAGGCGAGCTCCTGAGGGCTCTCCAAGGCTGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | CAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTCAGTCTGCAACGAGGTGCGGCGCATaGACTGGCGGTGCATGCGGA | + |
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Preference number: 4 (lower is better) Translates to: QNDSQCASSLGTQGPQSATRCGA*TGGACG Trigger: TCCGCATGCACCGCCAGTTCATGCGCCGCACCTCGT...TGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | GCAACAGGACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGGCGGCGAAAGTCGCTaGGGCGCTGCAGGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ATGHACYFSEKAPPNTGTGGESR*GAAGLG Trigger: CCCCAGCCCTGCAGCGCCTCAGCGACTTTCGCCGCC...TGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTCCTGTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | GACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCGGCGGCGAAAGTCGCTaGGGCGCTGCAGGGCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: DMLAISLRKLLQTQVQYSGGESR*GAAGLG Trigger: CCCCAGCCCTGCAGCGCCTCAGCGACTTTCGCCGCC...GGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | CAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTCAGTCTGCAGAGGTGGTGTCTGCTTaGGTCAGGCCCATGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: QNDSQCASSLGTQGPQSAEVVSA*VRPMPC Trigger: GCATGGCATGGGCCTGACCCAAGCAGACACCACCTC...TGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR GCA 90 bp | CTAGTGGGAGTCCAGATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATCGCATGAACTGGCGGTaGATGCGGAGCAGCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: LVGVQMKTALLSTAMYVYRMNWR*MRSSAP Trigger: CGGCGCGCTGCTCCGCATGCACCGCCAGTTCATGCG...ATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATCTGGACTCCCACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCCATGGTGCTGCTCCGTaGCCAACGAGGTGCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LLQTQVQYSWELHETVSVHGAAP*PTRCGA Trigger: TGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATG...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR GCA 90 bp | CAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTCAGTCTGCACTTGGGTCAGGCCCATaGCATGCGAACCTGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: QNDSQCASSLGTQGPQSALGSGP*HANLEA Trigger: TGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAG...TGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | CAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTCAGTCTGCAAGGAAGGAGCGAGAGTaGCCGGACATGGCGGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: QNDSQCASSLGTQGPQSARKERE*PDMAED Trigger: ATCTTCCGCCATGTCCGGCCACTCTCGCTCCTTCCT...TGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTGGTGGTCCAGTCGATaGAGCACCAGGTGCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: LLQTQVQYSWELHETVSVWWSSR*STRCPG Trigger: ACCCGGGCACCTGGTGCTTCATCGACTGGACCACCA...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | TCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTGTGCGGCGCATGAACTaGCGGTGCATGCGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSKHRYSIPGSYTKLSVSVRRMN*RCMRSS Trigger: GCTGCTCCGCATGCACCGCCAGTTCATGCGCCGCAC...AGACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | CTAGTGGGAGTCCAGATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGGTGGTCCAGTCGATaGAGCACCAGGTGCCCGGGT | + |
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Preference number: 4 (lower is better) Translates to: LVGVQMKTALLSTAMYVYWWSSR*STRCPG Trigger: ACCCGGGCACCTGGTGCTTCATCGACTGGACCACCA...ATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATCTGGACTCCCACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR GCA 90 bp | GACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCCATGGTGCTGCTCCGTaGCCAACGAGGTGCGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: DMLAISLRKLLQTQVQYSHGAAP*PTRCGA Trigger: TGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATG...GGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTGGTCTCCGGGCCACTaGCCCTTCATGTATGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLQTQVQYSWELHETVSVWSPGH*PFMYVA Trigger: CGCCACATACATGAAGGGCCAGTGGCCCGGAGACCA...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | GCAACAGGACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACACTCTCTGAGCAGTGCTaGGCCGAGCTGTCTCTGCCG | + |
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Preference number: 4 (lower is better) Translates to: ATGHACYFSEKAPPNTGTLSEQC*AELSLP Trigger: CGGCAGAGACAGCTCGGCCCAGCACTGCTCAGAGAG...TGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTCCTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCGAGAGTGGCCGGACATaGCGGAAGATGTCCTCCGAC | + |
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Preference number: 4 (lower is better) Translates to: LLQTQVQYSWELHETVSVESGRT*RKMSSD Trigger: GTCGGAGGACATCTTCCGCCATGTCCGGCCACTCTC...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | GAGTCACATCAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTAAGTTCTCAGCGAGGTaGTGTCTGCTTGGGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ESHQNDSQCASSLGTQGPKFSAR*CLLGSG Trigger: GCCTGACCCAAGCAGACACCACCTCGCTGAGAACTT...AGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTGATGTGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR GCA 90 bp | CAAAACCAAGCAATTCACAAGGACACGTTAAGCAACAGGACATGCTTGCTATTTCGCATGAACTGGCGGTaGATGCGGAGCAGCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: QNQAIHKDTLSNRTCLLFRMNWR*MRSSAP Trigger: CGGCGCGCTGCTCCGCATGCACCGCCAGTTCATGCG...AAATAGCAAGCATGTCCTGTTGCTTAACGTGTCCTTGTGAATTGCTTGGTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | CTAGTGGGAGTCCAGATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATCCACCACCCCGAAGATaGACATCACTGCGGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: LVGVQMKTALLSTAMYVYPPPRR*TSLREW Trigger: CCATTCCCGCAGTGATGTTCATCTTCGGGGTGGTGG...ATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATCTGGACTCCCACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGAGTGCGGCGCATGAACTaGCGGTGCATGCGGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGVRRMN*RCMRSS Trigger: GCTGCTCCGCATGCACCGCCAGTTCATGCGCCGCAC...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCGCTTTCAGTCAGGTCTaGCAGGTACAGGAGGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLQTQVQYSWELHETVSVAFSQV*QVQEGL Trigger: CAGACCCTCCTGTACCTGCCAGACCTGACTGAAAGC...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | TGTTCTCTAGTGGGAGTCCAGATGAAGACAGCCCTTCTGAGTACAGCTATGTATTGCCCAGAAGGTCAGTaGCAGCCAGCCCACATACTA | + |
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Preference number: 4 (lower is better) Translates to: CSLVGVQMKTALLSTAMYCPEGQ*QPAHIL Trigger: TAGTATGTGGGCTGGCTGTCACTGACCTTCTGGGCA...ATACATAGCTGTACTCAGAAGGGCTGTCTTCATCTGGACTCCCACTAGAGAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | CTGGACCCCTGGTATGTGCCAAATAGAAAGCTCTTTTGCTATGACAATAGCGTAAGAAGTAGGCGTGGTTaGTGGCCAGGTAGCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LDPWYVPNRKLFCYDNSVRSRRG*WPGSAR Trigger: TCGAGCGCTACCTGGCCATCAACCACGCCTACTTCT...TACGCTATTGTCATAGCAAAAGAGCTTTCTATTTGGCACATACCAGGGGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCGTCAGGCCCATGCCATaGGAACCTGGAAGCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: LLQTQVQYSWELHETVSVVRPMP*EPGSKF Trigger: GAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGAC...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | GATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTATGCCCAGGCCCATGTTaGGCAGCGCGCAGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DEDSPSEYSYVCLLHRILCPGPC*AARRTA Trigger: TGCTGTTCTGCGCGCTGCCCAACATGGGCCTGGGCA...TAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTTCCAGGGGTCCAGGATaGGGTTCACAGAAGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: SSKHRYSIPGSYTKLSVSSRGPG*GSQKQS Trigger: GGATTGCTTCTGTGAACCCCATCCTGGACCCCTGGA...AGACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | GCAACAGGACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGCTTTCAGTCAGGTCTaGCAGGTACAGGAGGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATGHACYFSEKAPPNTGTAFSQV*QVQEGL Trigger: CAGACCCTCCTGTACCTGCCAGACCTGACTGAAAGC...TGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTCCTGTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | CTGGACCCCTGGTATGTGCCAAATAGAAAGCTCTTTTGCTATGACAATAGCGTATGCCCAGAAGGTCAGTaGCAGCCAGCCCACATACTA | + |
|
Preference number: 4 (lower is better) Translates to: LDPWYVPNRKLFCYDNSVCPEGQ*QPAHIL Trigger: TAGTATGTGGGCTGGCTGTCACTGACCTTCTGGGCA...TACGCTATTGTCATAGCAAAAGAGCTTTCTATTTGGCACATACCAGGGGTCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTCAGTCTGCACGAAGAAAAGTAGGATaGAGGTGCTATAGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: QNDSQCASSLGTQGPQSARRKVG*RCYSHT Trigger: TGTGTGACTATAGCACCTTCATCCTACTTTTCTTCG...TGCAGACTGAGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | TGTTCTCTAGTGGGAGTCCAGATGAAGACAGCCCTTCTGAGTACAGCTATGTATGAAGATGAACATCACTaGGGGAATGGTCACCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSLVGVQMKTALLSTAMYEDEHH*GNGHRA Trigger: AGCCCGGTGACCATTCCCGCAGTGATGTTCATCTTC...ATACATAGCTGTACTCAGAAGGGCTGTCTTCATCTGGACTCCCACTAGAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTGGGAGTCCAGATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATAGTAAGATGACCATCTaGATCTCCGCACCCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LVGVQMKTALLSTAMYVYSKMTI*ISAPAM Trigger: CATCGCGGGTGCGGAGATCCAGATGGTCATCTTACT...ATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATCTGGACTCCCACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCACATCAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTGATGGCCTGCAAATCTaGGTTTCTGCTGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESHQNDSQCASSLGTQGPDGLQI*VSADVF Trigger: AAAGACATCAGCAGAAACCCAGATTTGCAGGCCATC...AGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTGATGTGACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGAGAGAGTGGCCGGACATaGCGGAAGATGTCCTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGESGRT*RKMSSD Trigger: GTCGGAGGACATCTTCCGCCATGTCCGGCCACTCTC...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGAGAGGTGGTGTCTGCTTaGGTCAGGCCCATGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGEVVSA*VRPMPC Trigger: GCATGGCATGGGCCTGACCCAAGCAGACACCACCTC...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | GAGTCACATCAGAATGACAGCCAATGTGCTTCAAGCCTGGGCACTCAAGGACCTCGAAGAAAAGTAGGATaGAGGTGCTATAGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: ESHQNDSQCASSLGTQGPRRKVG*RCYSHT Trigger: TGTGTGACTATAGCACCTTCATCCTACTTTTCTTCG...AGGTCCTTGAGTGCCCAGGCTTGAAGCACATTGGCTGTCATTCTGATGTGACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | GATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTAAGAAGTAGGCGTGGTTaGTGGCCAGGTAGCGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: DEDSPSEYSYVCLLHRILRSRRG*WPGSAR Trigger: TCGAGCGCTACCTGGCCATCAACCACGCCTACTTCT...TAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | AAAAATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATACGAGGTGCGGCGCATaGACTGGCGGTGCATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: KNNIDNISWLYWQERAYHTRCGA*TGGACG Trigger: TCCGCATGCACCGCCAGTTCATGCGCCGCACCTCGT...ATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | ATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATGTGTGCGGAATGGAGCAGATaGGCACCACCAGAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITSTILAGYIGRRGHIMCAEWSR*APPERW Trigger: CCACCTCTCTGGTGGTGCTCATCTGCTCCATTCCGC...ACACATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | ATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATGTGTCGCACACCAGCACGTTaGAGAGCACGGTGGCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ITSTILAGYIGRRGHIMCRTPAR*RARWQG Trigger: TCCTTGCCACCGTGCTCTGCAACGTGCTGGTGTGCG...ACACATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | GACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCCATGCCATGCGAACCTaGAAGCAAATTCCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DMLAISLRKLLQTQVQYSHAMRT*KQIPAS Trigger: GGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATG...GGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | CAAAACCAAGCAATTCACAAGGACACGTTAAGCAACAGGACATGCTTGCTATTTACACTCTCAGAGTCCTaGCCCTGGGAGGAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNQAIHKDTLSNRTCLLFTLSES*PWEESE Trigger: CTCAGACTCCTCCCAGGGCCAGGACTCTGAGAGTGT...AAATAGCAAGCATGTCCTGTTGCTTAACGTGTCCTTGTGAATTGCTTGGTTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | GATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTAACACTCTCAGAGTCCTaGCCCTGGGAGGAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DEDSPSEYSYVCLLHRILTLSES*PWEESE Trigger: CTCAGACTCCTCCCAGGGCCAGGACTCTGAGAGTGT...TAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | CTCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTCTCTATGGCTTTACTaGGCACAGTCTTCCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLQTQVQYSWELHETVSVSLWLY*AQSSEE Trigger: TTCTTCGGAAGACTGTGCTCAGTAAAGCCATAGAGA...GACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACCCAGCGAGGTGGTGTCTaGTTGGGTCAGGCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSYALKSYQYQAQTLIKTQRGGV*LGQAHA Trigger: GGCATGGGCCTGACCCAAGCAGACACCACCTCGCTG...GGTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | AAAAATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATCAGCGAGGTGGTGTCTaGTTGGGTCAGGCCCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNNIDNISWLYWQERAYHQRGGV*LGQAHA Trigger: GGCATGGGCCTGACCCAAGCAGACACCACCTCGCTG...ATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | AAAAATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATTGCCCAGGCCCATGTTaGGCAGCGCGCAGAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNNIDNISWLYWQERAYHCPGPC*AARRTA Trigger: TGCTGTTCTGCGCGCTGCCCAACATGGGCCTGGGCA...ATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | AGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACCAAGCTCTCTGAGCAGTGCTaGGCCGAGCTGTCTCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SYALKSYQYQAQTLIKTKLSEQC*AELSLP Trigger: CGGCAGAGACAGCTCGGCCCAGCACTGCTCAGAGAG...CTTGGTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | ATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATGTGTAGGAAGGAGCGAGAGTaGCCGGACATGGCGGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ITSTILAGYIGRRGHIMCRKERE*PDMAED Trigger: ATCTTCCGCCATGTCCGGCCACTCTCGCTCCTTCCT...ACACATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGACTCCGGGGATGGACATaGTGGTGGTGGTTAGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGLRGWT*WWWLVT Trigger: TGTTACTAACCACCACCATCATGTCCATCCCCGGAG...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047379.15 |
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| CDS-3UTR TCA 90 bp | AGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACCAAGGCGGAATGGAGCAGATaGGCACCACCAGAGAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYALKSYQYQAQTLIKTKAEWSR*APPERW Trigger: CCACCTCTCTGGTGGTGCTCATCTGCTCCATTCCGC...CTTGGTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | CTGGACCCCTGGTATGTGCCAAATAGAAAGCTCTTTTGCTATGACAATAGCGTAGGCAGAAGAGGCACTTaGTCTTCTCTATGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LDPWYVPNRKLFCYDNSVGRRGT*SSLWLY Trigger: GTAAAGCCATAGAGAAGATCAAGTGCCTCTTCTGCC...TACGCTATTGTCATAGCAAAAGAGCTTTCTATTTGGCACATACCAGGGGTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | GCAACAGGACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACATTTCACTGGGGAATGTaGCTTGCAGAGAGTTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ATGHACYFSEKAPPNTGTFHWGM*LAESFL Trigger: AAGGAAACTCTCTGCAAGTCACATTCCCCAGTGAAA...TGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTCCTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACCCGACTCTCTGAGCAGTaGTGGGCCGAGCTGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSYALKSYQYQAQTLIKTRLSEQ*WAELSL Trigger: CAGAGACAGCTCGGCCCAGCACTGCTCAGAGAGTCG...GGTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | GATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTAGTCAGGCCCATGCCATaGGAACCTGGAAGCAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: DEDSPSEYSYVCLLHRILVRPMP*EPGSKF Trigger: GAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGAC...TAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | GATGAAGACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTACATGCCATGCGAACCTaGAAGCAAATTCCTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DEDSPSEYSYVCLLHRILHAMRT*KQIPAS Trigger: GGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATG...TAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGTCTTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | AGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACCAAGCCACCACCCCGAAGATaGACATCACTGCGGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: SYALKSYQYQAQTLIKTKPPPRR*TSLREW Trigger: CCATTCCCGCAGTGATGTTCATCTTCGGGGTGGTGG...CTTGGTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | GACATGCTTGCTATTTCTCTGAGAAAGCTCCTCCAAACACAGGTACAGTATTCCTCTCTATGGCTTTACTaGGCACAGTCTTCCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DMLAISLRKLLQTQVQYSSLWLY*AQSSEE Trigger: TTCTTCGGAAGACTGTGCTCAGTAAAGCCATAGAGA...GGAATACTGTACCTGTGTTTGGAGGAGCTTTCTCAGAGAAATAGCAAGCATGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | AGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACCAAGCTTGGGTCAGGCCCATaGCATGCGAACCTGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYALKSYQYQAQTLIKTKLGSGP*HANLEA Trigger: TGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAG...CTTGGTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACACATCACTGCGGGAATaGTCACCGGGCTGTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQLRFKIISVSGSDFNQNTSLRE*SPGCSA Trigger: GGCTGAACAGCCCGGTGACCATTCCCGCAGTGATGT...GTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | AAAAATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATACATCACTGCGGGAATaGTCACCGGGCTGTTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNNIDNISWLYWQERAYHTSLRE*SPGCSA Trigger: GGCTGAACAGCCCGGTGACCATTCCCGCAGTGATGT...ATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGATCATGTATGTGGCGATaGTCACCGGGCTTACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGSCMWR*SPGLPT Trigger: TGTTGGTAAGCCCGGTGACCATCGCCACATACATGA...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTATAAGATTTCCAGGGGTCCAGGATaGGGTTCACAGAAGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: TALLSTAMYVYCTGFYKISRGPG*GSQKQS Trigger: GGATTGCTTCTGTGAACCCCATCCTGGACCCCTGGA...AATCTTATAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTATAAGATTAAGTTCTCAGCGAGGTaGTGTCTGCTTGGGTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TALLSTAMYVYCTGFYKIKFSAR*CLLGSG Trigger: GCCTGACCCAAGCAGACACCACCTCGCTGAGAACTT...AATCTTATAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCCAAACACAGGTACAGTATTCCTGGGAGTTACACGAAACTGTCAGTGTCTTTCACCACGTTTGGCTaGTATAACTGGTTAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKHRYSIPGSYTKLSVSFTTFG*YNWLMN Trigger: GTTCATTAACCAGTTATATCAGCCAAACGTGGTGAA...AGACACTGACAGTTTCGTGTAACTCCCAGGAATACTGTACCTGTGTTTGGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR TCA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGAGGCAGAAGAGGCACTTaGTCTTCTCTATGGCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGGRRGT*SSLWLY Trigger: GTAAAGCCATAGAGAAGATCAAGTGCCTCTTCTGCC...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTATAAGATTGAAGATGAACATCACTaGGGGAATGGTCACCGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TALLSTAMYVYCTGFYKIEDEHH*GNGHRA Trigger: AGCCCGGTGACCATTCCCGCAGTGATGTTCATCTTC...AATCTTATAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | ATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATGTGTTCATGTATGTGGCGATaGTCACCGGGCTTACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: ITSTILAGYIGRRGHIMCSCMWR*SPGLPT Trigger: TGTTGGTAAGCCCGGTGACCATCGCCACATACATGA...ACACATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | ACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTATAAGATTAGTAAGATGACCATCTaGATCTCCGCACCCGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TALLSTAMYVYCTGFYKISKMTI*ISAPAM Trigger: CATCGCGGGTGCGGAGATCCAGATGGTCATCTTACT...AATCTTATAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CCA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGAGATGGCCTGCAAATCTaGGTTTCTGCTGATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGDGLQI*VSADVF Trigger: AAAGACATCAGCAGAAACCCAGATTTGCAGGCCATC...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | AGCTACGCTTTAAAATCATATCAGTATCAGGCTCAGACTTTAATCAAAACCAAGTTTCACTGGGGAATGTaGCTTGCAGAGAGTTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: SYALKSYQYQAQTLIKTKFHWGM*LAESFL Trigger: AAGGAAACTCTCTGCAAGTCACATTCCCCAGTGAAA...CTTGGTTTTGATTAAAGTCTGAGCCTGATACTGATATGATTTTAAAGCGTAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR TCA 90 bp | AAAAATAACATCGACAATATTAGCTGGTTATATTGGCAGGAGAGGGCATATCATTTCACCACGTTTGGCTaGTATAACTGGTTAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KNNIDNISWLYWQERAYHFTTFG*YNWLMN Trigger: GTTCATTAACCAGTTATATCAGCCAAACGTGGTGAA...ATGATATGCCCTCTCCTGCCAATATAACCAGCTAATATTGTCGATGTTATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 90 bp | CCCCGACAGGCCACCGAAGCTACCGCGGCGGCGGCAGCCGCATGGTaGTGCTCCGTGCCCAACGAGGTGCGGCGCATGAACTGGCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PRQATEATAAAAAAW*CSVPNEVRRMNWRC Trigger: GCACCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGCTGCCGCCGCCGCGGTAGCTTCGGTGGCCTGTCGGGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | TGGCCCCGACAGGCCACCGAAGCTACCGCGGCGGCGGCAGCCGCATaGTGCTGCTCCGTGCCCAACGAGGTGCGGCGCATGAACTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WPRQATEATAAAAAA*CCSVPNEVRRMNWR Trigger: CCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGCTGCCGCCGCCGCGGTAGCTTCGGTGGCCTGTCGGGGCCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 90 bp | CGGCAGCCGCATGGTGCTGCTCCGTGCCCAACGAGGTGCGGCGCATaGACTGGCGGTGCATGCGGAGCAGCGCGCCGCACACCAGCACGT | + |
|
Preference number: 5 (lower is better) Translates to: RQPHGAAPCPTRCGA*TGGACGAARRTPAR Trigger: ACGTGCTGGTGTGCGGCGCGCTGCTCCGCATGCACCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGCTGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 90 bp | CGACAGGCCACCGAAGCTACCGCGGCGGCGGCAGCCGCATGGTGCTaGTCCGTGCCCAACGAGGTGCGGCGCATGAACTGGCGGTGCATG | + |
|
Preference number: 5 (lower is better) Translates to: RQATEATAAAAAAWC*SVPNEVRRMNWRCM Trigger: CATGCACCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGCTGCCGCCGCCGCGGTAGCTTCGGTGGCCTGTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | GCCGCATGGTGCTGCTCCGTGCCCAACGAGGTGCGGCGCATGAACTaGCGGTGCATGCGGAGCAGCGCGCCGCACACCAGCACGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAWCCSVPNEVRRMN*RCMRSSAPHTSTLQ Trigger: CTGCAACGTGCTGGTGTGCGGCGCGCTGCTCCGCATGCACCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 90 bp | TGGTGCTGCTCCGTGCCCAACGAGGTGCGGCGCATGAACTGGCGGTaGATGCGGAGCAGCGCGCCGCACACCAGCACGTTGCAGAGCACG | + |
|
Preference number: 5 (lower is better) Translates to: WCCSVPNEVRRMNWR*MRSSAPHTSTLQST Trigger: CGTGCTCTGCAACGTGCTGGTGTGCGGCGCGCTGCTCCGCATGCACCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 90 bp | GGAGCGAGAGTGGCCGGACATGGCGGAAGATGTCCTCCGACTCTCTaGGCAGTGCTGGGCCGAGCTGTCTCTGCCGGAACCGCCAATGCG | + |
|
Preference number: 5 (lower is better) Translates to: GARVAGHGGRCPPTL*AVLGRAVSAGTANA Trigger: CGCATTGGCGGTTCCGGCAGAGACAGCTCGGCCCAGCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCACTCTCGCTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 90 bp | GAGTGGCCGGACATGGCGGAAGATGTCCTCCGACTCTCTGAGCAGTaGTGGGCCGAGCTGTCTCTGCCGGAACCGCCAATGCGGCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EWPDMAEDVLRLSEQ*WAELSLPEPPMRQK Trigger: CTTCTGCCGCATTGGCGGTTCCGGCAGAGACAGCTCGGCCCAGCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | TGGCCGGACATGGCGGAAGATGTCCTCCGACTCTCTGAGCAGTGCTaGGCCGAGCTGTCTCTGCCGGAACCGCCAATGCGGCAGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: WPDMAEDVLRLSEQC*AELSLPEPPMRQKR Trigger: CCTCTTCTGCCGCATTGGCGGTTCCGGCAGAGACAGCTCGGCCCAGCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | TCTCCTTTAACTCCCGGGCGAGGAAGGAGCGAGAGTGGCCGGACATaGCGGAAGATGTCCTCCGACTCTCTGAGCAGTGCTGGGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLTPGRGRSESGRT*RKMSSDSLSSAGPS Trigger: GCTCGGCCCAGCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCACTCTCGCTCCTTCCTCGCCCGGGAGTTAAAGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | CAGATGAGCACCACCAGAGAGGTGGCGATGAGTAAGATGACCATCTaGATCTCCGCACCCGCGATGCGCCGGAAACTCCTGCGGCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: QMSTTREVAMSKMTI*ISAPAMRRKLLRRR Trigger: TCGCCGCCGCAGGAGTTTCCGGCGCATCGCGGGTGCGGAGATCCAGATGGTCATCTTACTCATCGCCACCTCTCTGGTGGTGCTCATCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 90 bp | TTTCAGTCAGGTCTGGCAGGTACAGGAGGGTCTGGGACGTGCTGCTaGTCTCCTTTAACTCCCGGGCGAGGAAGGAGCGAGAGTGGCCGG | + |
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Preference number: 5 (lower is better) Translates to: FQSGLAGTGGSGTCC*SPLTPGRGRSESGR Trigger: CCGGCCACTCTCGCTCCTTCCTCGCCCGGGAGTTAAAGGAGATCAGCAGCACGTCCCAGACCCTCCTGTACCTGCCAGACCTGACTGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 90 bp | GGCCCATGCCATGCGAACCTGGAAGCAAATTCCTGCCTCCGAGGCTaGTTTCAGTCAGGTCTGGCAGGTACAGGAGGGTCTGGGACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPCHANLEANSCLRG*FQSGLAGTGGSGTC Trigger: GCACGTCCCAGACCCTCCTGTACCTGCCAGACCTGACTGAAAGCAGCCTCGGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | GTGCTGCTGATCTCCTTTAACTCCCGGGCGAGGAAGGAGCGAGAGTaGCCGGACATGGCGGAAGATGTCCTCCGACTCTCTGAGCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: VLLISFNSRARKERE*PDMAEDVLRLSEQC Trigger: GCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCACTCTCGCTCCTTCCTCGCCCGGGAGTTAAAGGAGATCAGCAGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | CCTCCGAGGCTGCTTTCAGTCAGGTCTGGCAGGTACAGGAGGGTCTaGGACGTGCTGCTGATCTCCTTTAACTCCCGGGCGAGGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPRLLSVRSGRYRRV*DVLLISFNSRARKE Trigger: CTCCTTCCTCGCCCGGGAGTTAAAGGAGATCAGCAGCACGTCCCAGACCCTCCTGTACCTGCCAGACCTGACTGAAAGCAGCCTCGGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | CAGCGAGGTGGTGTCTGCTTGGGTCAGGCCCATGCCATGCGAACCTaGAAGCAAATTCCTGCCTCCGAGGCTGCTTTCAGTCAGGTCTGG | + |
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Preference number: 5 (lower is better) Translates to: QRGGVCLGQAHAMRT*KQIPASEAAFSQVW Trigger: CCAGACCTGACTGAAAGCAGCCTCGGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | GGGAGGAGTCTGAGGTCTCGGAAATTCGCAAAGTTCTCAGCGAGGTaGTGTCTGCTTGGGTCAGGCCCATGCCATGCGAACCTGGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: GRSLRSRKFAKFSAR*CLLGSGPCHANLEA Trigger: TGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTTGCGAATTTCCGAGACCTCAGACTCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 90 bp | AAAGTTCTCAGCGAGGTGGTGTCTGCTTGGGTCAGGCCCATGCCATaGGAACCTGGAAGCAAATTCCTGCCTCCGAGGCTGCTTTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: KVLSEVVSAWVRPMP*EPGSKFLPPRLLSV Trigger: GACTGAAAGCAGCCTCGGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 90 bp | TTCGCAAAGTTCTCAGCGAGGTGGTGTCTGCTTGGGTCAGGCCCATaGCATGCGAACCTGGAAGCAAATTCCTGCCTCCGAGGCTGCTTT | + |
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Preference number: 5 (lower is better) Translates to: FAKFSARWCLLGSGP*HANLEANSCLRGCF Trigger: AAAGCAGCCTCGGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTTGCGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | GAGGTCTCGGAAATTCGCAAAGTTCTCAGCGAGGTGGTGTCTGCTTaGGTCAGGCCCATGCCATGCGAACCTGGAAGCAAATTCCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: EVSEIRKVLSEVVSA*VRPMPCEPGSKFLP Trigger: AGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTTGCGAATTTCCGAGACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | CCACTAACCTCATCCACCAACAGGACACTCTCAGAGTCCTGGCCCTaGGAGGAGTCTGAGGTCTCGGAAATTCGCAAAGTTCTCAGCGAG | + |
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Preference number: 5 (lower is better) Translates to: PLTSSTNRTLSESWP*EESEVSEIRKVLSE Trigger: CTCGCTGAGAACTTTGCGAATTTCCGAGACCTCAGACTCCTCCCAGGGCCAGGACTCTGAGAGTGTCCTGTTGGTGGATGAGGTTAGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | TGGCTCCCACTAACCTCATCCACCAACAGGACACTCTCAGAGTCCTaGCCCTGGGAGGAGTCTGAGGTCTCGGAAATTCGCAAAGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WLPLTSSTNRTLSES*PWEESEVSEIRKVL Trigger: GAGAACTTTGCGAATTTCCGAGACCTCAGACTCCTCCCAGGGCCAGGACTCTGAGAGTGTCCTGTTGGTGGATGAGGTTAGTGGGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 90 bp | AATGTGACTTGCAGAGAGTTTCCTTTAGAGGCAGGCTCCTCTCTGTaGCTCCCACTAACCTCATCCACCAACAGGACACTCTCAGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NVTCREFPLEAGSSL*LPLTSSTNRTLSES Trigger: GGACTCTGAGAGTGTCCTGTTGGTGGATGAGGTTAGTGGGAGCCACAGAGAGGAGCCTGCCTCTAAAGGAAACTCTCTGCAAGTCACATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 90 bp | GCCTGCAAATCTGGGTTTCTGCTGATGTCTTTCACCACGTTTGGCTaGTATAACTGGTTAATGAACACTCGCACCACGAGCGGAATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ACKSGFLLMSFTTFG*YNWLMNTRTTSGME Trigger: CTCCATTCCGCTCGTGGTGCGAGTGTTCATTAACCAGTTATATCAGCCAAACGTGGTGAAAGACATCAGCAGAAACCCAGATTTGCAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CAA 90 bp | AAGGATGCTGTCGGACATTCTGTTGAACAAGTAAAACTACACACACTTTCAGGAACTGGGGAATGTGACTaGCAGAGAGTTTCCTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KDAVGHSVEQVKLHTLSGTGECD*QRVSFR Trigger: TCTAAAGGAAACTCTCTGCAAGTCACATTCCCCAGT...TCCTGAAAGTGTGTGTAGTTTTACTTGTTCAACAGAATGTCCGACAGCATCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS-3UTR CAA 90 bp | ACAGCCCTTCTGAGTACAGCTATGTATGTCTATTGCACAGGATTTTATAAGATTACTGGGGAATGTGACTaGCAGAGAGTTTCCTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TALLSTAMYVYCTGFYKITGECD*QRVSFR Trigger: TCTAAAGGAAACTCTCTGCAAGTCACATTCCCCAGT...AATCTTATAAAATCCTGTGCAATAGACATACATAGCTGTACTCAGAAGGGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | CAGGCCACCGAAGCTACCGCGGCGGCGGCAGCCGCATaGTGCTGCTCCGTGCCCAACGAGGTGCGGCGCATG | + |
|
Preference number: 6 (lower is better) Translates to: QATEATAAAAAA*CCSVPNEVRRM Trigger: CATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGCTGCCGCCGCCGCGGTAGCTTCGGTGGCCTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 72 bp | GCCACCGAAGCTACCGCGGCGGCGGCAGCCGCATGGTaGTGCTCCGTGCCCAACGAGGTGCGGCGCATGAAC | + |
|
Preference number: 6 (lower is better) Translates to: ATEATAAAAAAW*CSVPNEVRRMN Trigger: GTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGCTGCCGCCGCCGCGGTAGCTTCGGTGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 72 bp | ACCGAAGCTACCGCGGCGGCGGCAGCCGCATGGTGCTaGTCCGTGCCCAACGAGGTGCGGCGCATGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: TEATAAAAAAWC*SVPNEVRRMNW Trigger: CCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATGCGGCTGCCGCCGCCGCGGTAGCTTCGGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | TGCTGCTCCGTGCCCAACGAGGTGCGGCGCATGAACTaGCGGTGCATGCGGAGCAGCGCGCCGCACACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CCSVPNEVRRMN*RCMRSSAPHTS Trigger: GCTGGTGTGCGGCGCGCTGCTCCGCATGCACCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 72 bp | CATGGTGCTGCTCCGTGCCCAACGAGGTGCGGCGCATaGACTGGCGGTGCATGCGGAGCAGCGCGCCGCACA | + |
|
Preference number: 6 (lower is better) Translates to: HGAAPCPTRCGA*TGGACGAARRT Trigger: TGTGCGGCGCGCTGCTCCGCATGCACCGCCAGTTCATGCGCCGCACCTCGTTGGGCACGGAGCAGCACCATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 72 bp | GTGGCCGGACATGGCGGAAGATGTCCTCCGACTCTCTaGGCAGTGCTGGGCCGAGCTGTCTCTGCCGGAACC | + |
|
Preference number: 6 (lower is better) Translates to: VAGHGGRCPPTL*AVLGRAVSAGT Trigger: GGTTCCGGCAGAGACAGCTCGGCCCAGCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | ACTCCCGGGCGAGGAAGGAGCGAGAGTGGCCGGACATaGCGGAAGATGTCCTCCGACTCTCTGAGCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPGRGRSESGRT*RKMSSDSLSSA Trigger: AGCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCACTCTCGCTCCTTCCTCGCCCGGGAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 72 bp | GGTCTGGCAGGTACAGGAGGGTCTGGGACGTGCTGCTaGTCTCCTTTAACTCCCGGGCGAGGAAGGAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GLAGTGGSGTCC*SPLTPGRGRSE Trigger: CTCGCTCCTTCCTCGCCCGGGAGTTAAAGGAGATCAGCAGCACGTCCCAGACCCTCCTGTACCTGCCAGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 72 bp | GCCCATGTTGGGCAGCGCGCAGAACAGCACGTTAGATaGATAGATGGCGAAGAGTGTGAGGCCGGCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AHVGQRAEQHVR*IDGEECEAGQP Trigger: CGGCTGGCCGGCCTCACACTCTTCGCCATCTATGCATCTAACGTGCTGTTCTGCGCGCTGCCCAACATGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 72 bp | GACATGGCGGAAGATGTCCTCCGACTCTCTGAGCAGTaGTGGGCCGAGCTGTCTCTGCCGGAACCGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: DMAEDVLRLSEQ*WAELSLPEPPM Trigger: CATTGGCGGTTCCGGCAGAGACAGCTCGGCCCAGCACTGCTCAGAGAGTCGGAGGACATCTTCCGCCATGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 72 bp | AGCGAGGTGGTGTCTGCTTGGGTCAGGCCCATGCCATaGGAACCTGGAAGCAAATTCCTGCCTCCGAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEVVSAWVRPMP*EPGSKFLPPRL Trigger: CAGCCTCGGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | ATCTCCTTTAACTCCCGGGCGAGGAAGGAGCGAGAGTaGCCGGACATGGCGGAAGATGTCCTCCGACTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ISFNSRARKERE*PDMAEDVLRLS Trigger: AGAGAGTCGGAGGACATCTTCCGCCATGTCCGGCCACTCTCGCTCCTTCCTCGCCCGGGAGTTAAAGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | CTGCTTTCAGTCAGGTCTGGCAGGTACAGGAGGGTCTaGGACGTGCTGCTGATCTCCTTTAACTCCCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLSVRSGRYRRV*DVLLISFNSRA Trigger: CGCCCGGGAGTTAAAGGAGATCAGCAGCACGTCCCAGACCCTCCTGTACCTGCCAGACCTGACTGAAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CAA 90 bp | GTCACCGGGCTGTTCAGCCTCTCCGGAGTGGAGGAGAAGGACGCGTaGACTCCGGGGATGGACATGATGGTGGTGGTTAGTAACACACAG | + |
|
Preference number: 6 (lower is better) Translates to: VTGLFSLSGVEEKDA*TPGMDMMVVVSNTQ Trigger: CTGTGTGTTACTAACCACCACCATCATGTCCATCCCCGGAGTCAACGCGTCCTTCTCCTCCACTCCGGAGAGGCTGAACAGCCCGGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047379.15 |
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| CDS GCA 72 bp | TTCTCAGCGAGGTGGTGTCTGCTTGGGTCAGGCCCATaGCATGCGAACCTGGAAGCAAATTCCTGCCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: FSARWCLLGSGP*HANLEANSCLR Trigger: TCGGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | GGTGTCTGCTTGGGTCAGGCCCATGCCATGCGAACCTaGAAGCAAATTCCTGCCTCCGAGGCTGCTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: GVCLGQAHAMRT*KQIPASEAAFS Trigger: ACTGAAAGCAGCCTCGGAGGCAGGAATTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CAA 72 bp | CTGTTCAGCCTCTCCGGAGTGGAGGAGAAGGACGCGTaGACTCCGGGGATGGACATGATGGTGGTGGTTAGT | + |
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Preference number: 6 (lower is better) Translates to: LFSLSGVEEKDA*TPGMDMMVVVS Trigger: ACTAACCACCACCATCATGTCCATCCCCGGAGTCAACGCGTCCTTCTCCTCCACTCCGGAGAGGCTGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047379.15 |
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| CDS GCA 72 bp | CATGCGAACCTGGAAGCAAATTCCTGCCTCCGAGGCTaGTTTCAGTCAGGTCTGGCAGGTACAGGAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: HANLEANSCLRG*FQSGLAGTGGS Trigger: AGACCCTCCTGTACCTGCCAGACCTGACTGAAAGCAGCCTCGGAGGCAGGAATTTGCTTCCAGGTTCGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS GCA 72 bp | CTCGGAAATTCGCAAAGTTCTCAGCGAGGTGGTGTCTaGTTGGGTCAGGCCCATGCCATGCGAACCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LGNSQSSQRGGV*LGQAHAMRTWK Trigger: CTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTTGCGAATTTCCGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | CTGAGGTCTCGGAAATTCGCAAAGTTCTCAGCGAGGTaGTGTCTGCTTGGGTCAGGCCCATGCCATGCGAAC | + |
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Preference number: 6 (lower is better) Translates to: LRSRKFAKFSAR*CLLGSGPCHAN Trigger: GTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTTGCGAATTTCCGAGACCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | CTAACCTCATCCACCAACAGGACACTCTCAGAGTCCTaGCCCTGGGAGGAGTCTGAGGTCTCGGAAATTCGC | + |
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Preference number: 6 (lower is better) Translates to: LTSSTNRTLSES*PWEESEVSEIR Trigger: GCGAATTTCCGAGACCTCAGACTCCTCCCAGGGCCAGGACTCTGAGAGTGTCCTGTTGGTGGATGAGGTTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CAA 90 bp | GCCGAGCTGTCTCTGCCGGAACCGCCAATGCGGCAGAAGAGGCACTaGATCTTCTCTATGGCTTTACTGAGCACAGTCTTCCGAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: AELSLPEPPMRQKRH*IFSMALLSTVFRRR Trigger: CCTTCTTCGGAAGACTGTGCTCAGTAAAGCCATAGAGAAGATCAAGTGCCTCTTCTGCCGCATTGGCGGTTCCGGCAGAGACAGCTCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CAA 72 bp | GGAAATTCGCAAAGTTCTCAGCGAGGTGGTGTCTGCTaGGGTCAGGCCCATGCCATGCGAACCTGGAAGCAA | + |
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Preference number: 6 (lower is better) Translates to: GNSQSSQRGGVC*GQAHAMRTWKQ Trigger: TTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTTGCGAATTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 72 bp | TCACCGGGCTTACCAACAAGGTGCCCAGAAGGTCAGTaGCAGCCAGCCCACATACTAGAGTGTAAAAGGTCG | + |
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Preference number: 6 (lower is better) Translates to: SPGLPTRCPEGQ*QPAHILECKRS Trigger: CGACCTTTTACACTCTAGTATGTGGGCTGGCTGTCACTGACCTTCTGGGCACCTTGTTGGTAAGCCCGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | GAAATTCGCAAAGTTCTCAGCGAGGTGGTGTCTGCTTaGGTCAGGCCCATGCCATGCGAACCTGGAAGCAAA | + |
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Preference number: 6 (lower is better) Translates to: EIRKVLSEVVSA*VRPMPCEPGSK Trigger: TTTGCTTCCAGGTTCGCATGGCATGGGCCTGACCCAAGCAGACACCACCTCGCTGAGAACTTTGCGAATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | TCATCCACCAACAGGACACTCTCAGAGTCCTGGCCCTaGGAGGAGTCTGAGGTCTCGGAAATTCGCAAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SSTNRTLSESWP*EESEVSEIRKV Trigger: AACTTTGCGAATTTCCGAGACCTCAGACTCCTCCCAGGGCCAGGACTCTGAGAGTGTCCTGTTGGTGGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CCA 72 bp | TGCAGAGAGTTTCCTTTAGAGGCAGGCTCCTCTCTGTaGCTCCCACTAACCTCATCCACCAACAGGACACTC | + |
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Preference number: 6 (lower is better) Translates to: CREFPLEAGSSL*LPLTSSTNRTL Trigger: GAGTGTCCTGTTGGTGGATGAGGTTAGTGGGAGCCACAGAGAGGAGCCTGCCTCTAAAGGAAACTCTCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS CAA 72 bp | TCTCTGCCGGAACCGCCAATGCGGCAGAAGAGGCACTaGATCTTCTCTATGGCTTTACTGAGCACAGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SLPEPPMRQKRH*IFSMALLSTVF Trigger: GAAGACTGTGCTCAGTAAAGCCATAGAGAAGATCAAGTGCCTCTTCTGCCGCATTGGCGGTTCCGGCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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| CDS TCA 72 bp | TCTGGGTTTCTGCTGATGTCTTTCACCACGTTTGGCTaGTATAACTGGTTAATGAACACTCGCACCACGAGC | + |
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Preference number: 6 (lower is better) Translates to: SGFLLMSFTTFG*YNWLMNTRTTS Trigger: GCTCGTGGTGCGAGTGTTCATTAACCAGTTATATCAGCCAAACGTGGTGAAAGACATCAGCAGAAACCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047379.15 ENSMUST00000120563.2 |
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