Pregenerated sensors for PTGER3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040016Ensembl transcript IDs: ENSMUST00000041175.13, ENSMUST00000173533.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGCAGAAGCTTTCTCAAGGGGACAGGGCCTATGTATGTTGTATTaGGAGTCAAATTCAACTTTGCATCAAAGGCTCCATCACCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: HAEAFSRGQGLCMLY*ESNSTLHQRLHHLV Trigger: GACCAGGTGATGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAATACAACATACATAGGCCCTGTCCCCTTGAGAAAGCTTCTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR GCA 90 bp | CTATTTTCAGGTCATAGATGGCTTCATTTGAGACCCAGTGGGACATaGAGAAGCTTTCTCAAGGGGACAGGGCCTATGTATGTTGTATTG | + |
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Preference number: 1 (lower is better) Translates to: LFSGHRWLHLRPSGT*RSFLKGTGPMYVVL Trigger: CAATACAACATACATAGGCCCTGTCCCCTTGAGAAAGCTTCTGCATGTCCCACTGGGTCTCAAATGAAGCCATCTATGACCTGAAAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR GCA 90 bp | GGGGACAGGGCCTATGTATGTTGTATTGAGAGTCAAATTCAACTTTaGATCAAAGGCTCCATCACCTGGTCCTATAAGTGGGATGTCATT | + |
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Preference number: 1 (lower is better) Translates to: GDRAYVCCIESQIQL*IKGSITWSYKWDVI Trigger: AATGACATCCCACTTATAGGACCAGGTGATGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAATACAACATACATAGGCCCTGTCCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR CCA 90 bp | GGAGGGGAGTCAGAAGGGCAGGTGGAAGAAGGAAGAACAACTTGCTaGATTTACAAGCATGTAAGTGTGTACAAGATGGAAGCTATTAAA | + |
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Preference number: 1 (lower is better) Translates to: GGESEGQVEEGRTTC*IYKHVSVYKMEAIK Trigger: TTTAATAGCTTCCATCTTGTACACACTTACATGCTTGTAAATCCAGCAAGTTGTTCTTCCTTCTTCCACCTGCCCTTCTGACTCCCCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR CCA 90 bp | CTAGTACGTTGCATACACTTCCTAGATATTTTGACAATAACCTTATaGGAAACACTATTTTCAGGTCATAGATGGCTTCATTTGAGACCC | + |
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Preference number: 1 (lower is better) Translates to: LVRCIHFLDILTITL*ETLFSGHRWLHLRP Trigger: GGGTCTCAAATGAAGCCATCTATGACCTGAAAATAGTGTTTCCCATAAGGTTATTGTCAAAATATCTAGGAAGTGTATGCAACGTACTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR CAA 90 bp | GGAGATATTTCTGCACTGAGTCTCTCCATGCTGCTCTGTGTCGTCTaGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGAACC | + |
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Preference number: 2 (lower is better) Translates to: GDISALSLSMLLCVV*PPSQVQSLQSFTGT Trigger: GGTTCCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGAGACTCAGTGCAGAAATATCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGAATGCCCCCGTCTCAAGTaGAGAGTCTTCAGTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: SVSSCPRLKCRVFSPSQECPRLK*RVFSPS Trigger: TGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCA...TTCCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGCACTGAGTCTCTCCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGTCAGTCATCCTTCCCTaGGAGAAGAAATTCTCAGAC | + |
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Preference number: 2 (lower is better) Translates to: SALSLSMLLCVVLPPSQVSVILP*EKKFSD Trigger: GTCTGAGAATTTCTTCTCCCAGGGAAGGATGACTGA...CACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGAGACTCAGTGCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
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| 3UTR CAA 90 bp | GGCAGGAGGGGAGTCAGAAGGGCAGGTGGAAGAAGGAAGAACAACTaGCTGGATTTACAAGCATGTAAGTGTGTACAAGATGGAAGCTAT | + |
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Preference number: 2 (lower is better) Translates to: GRRGVRRAGGRRKNN*LDLQACKCVQDGSY Trigger: ATAGCTTCCATCTTGTACACACTTACATGCTTGTAAATCCAGCAAGTTGTTCTTCCTTCTTCCACCTGCCCTTCTGACTCCCCTCCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR CAA 90 bp | TCACCTGGTCCTATAAGTGGGATGTCATTGCAGCACATCTTAGTGTaGAGACTTGTGGAGAACTGTTCAGGGCCCTCTCTTGTGATGATG | + |
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Preference number: 2 (lower is better) Translates to: SPGPISGMSLQHILV*RLVENCSGPSLVMM Trigger: CATCATCACAAGAGAGGGCCCTGAACAGTTCTCCACAAGTCTCAACACTAAGATGTGCTGCAATGACATCCCACTTATAGGACCAGGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR CAA 90 bp | TTTGCATCAAAGGCTCCATCACCTGGTCCTATAAGTGGGATGTCATaGCAGCACATCTTAGTGTTGAGACTTGTGGAGAACTGTTCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FASKAPSPGPISGMS*QHILVLRLVENCSG Trigger: CCCTGAACAGTTCTCCACAAGTCTCAACACTAAGATGTGCTGCAATGACATCCCACTTATAGGACCAGGTGATGGAGCCTTTGATGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCGAGATATTTCTGCACTaGGTCTCTCCATGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LRTQLCGTVYLLGTNTLCEIFLH*VSPCCS Trigger: AGAGCAGCATGGAGAGACTCAGTGCAGAAATATCTC...GCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR GCA 90 bp | CAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTTGCCCCCGTCTCAAGTaGAGAGTCTTCAGTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: QLCGTVYLLGTNTLCTISCPRLK*RVFSPS Trigger: TGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCA...AGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR CAA 90 bp | ATAACCTTATGGGAAACACTATTTTCAGGTCATAGATGGCTTCATTaGAGACCCAGTGGGACATGCAGAAGCTTTCTCAAGGGGACAGGG | + |
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Preference number: 2 (lower is better) Translates to: ITLWETLFSGHRWLH*RPSGTCRSFLKGTG Trigger: CCCTGTCCCCTTGAGAAAGCTTCTGCATGTCCCACTGGGTCTCAAATGAAGCCATCTATGACCTGAAAATAGTGTTTCCCATAAGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCCAGGGAAACAGGTACTaGAATGAAAGTCCACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LRTQLCGTVYLLGTNTLCQGNRY*NESPLQ Trigger: CTGAAGTGGACTTTCATTGCAGTACCTGTTTCCCTG...GCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
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| 3UTR CAA 90 bp | ACATGCAGAAGCTTTCTCAAGGGGACAGGGCCTATGTATGTTGTATaGAGAGTCAAATTCAACTTTGCATCAAAGGCTCCATCACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TCRSFLKGTGPMYVV*RVKFNFASKAPSPG Trigger: ACCAGGTGATGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAATACAACATACATAGGCCCTGTCCCCTTGAGAAAGCTTCTGCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR-3UTR TCA 90 bp | AACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTCGAGATATTTCTGCACTaGGTCTCTCCATGCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NSVVLYTFLAQIPFAQSLEIFLH*VSPCCS Trigger: AGAGCAGCATGGAGAGACTCAGTGCAGAAATATCTC...GAGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR GCA 90 bp | ACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCGGCACAAATACCCTTTaGACAATCTCTCTTGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: TQLCGTVYLLGTNTLCTIGTNTL*TISLAL Trigger: GAGGGCAAGAGAGATTGTGCAAAGGGTATTTGTGCC...GATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR GCA 90 bp | CAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTGGCACAAATACCCTTTaGACAATCTCTCTTGCCCTC | + |
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Preference number: 2 (lower is better) Translates to: QLCGTVYLLGTNTLCTISGTNTL*TISLAL Trigger: GAGGGCAAGAGAGATTGTGCAAAGGGTATTTGTGCC...AGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGGAAAGGAAATCAGTCTGAAGTTGAACTGAAAGCTTGTATCGAGTACTTTTCATTTGAGACCCAGTaGGACATGCAGAAGCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: MWKGNQSEVELKACIEYFSFETQ*DMQKLS Trigger: AGAAAGCTTCTGCATGTCCCACTGGGTCTCAAATGA...AAAGTACTCGATACAAGCTTTCAGTTCAACTTCAGACTGATTTCCTTTCCACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGAAAGGAAATCAGTCTGAAGTTGAACTGAAAGCTTGTATCGAGTACTTTATAGTCTTTACCCTGTaGTCAGTAATAGTCACTGAA | + |
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Preference number: 2 (lower is better) Translates to: MWKGNQSEVELKACIEYFIVFTL*SVIVTE Trigger: TTCAGTGACTATTACTGAGCACAGGGTAAAGACTAT...AAAGTACTCGATACAAGCTTTCAGTTCAACTTCAGACTGATTTCCTTTCCACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR GCA 72 bp | CCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTaGAGAGTCTTCAGTCCTTCACAGGAACCAGCTAAC | + |
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Preference number: 3 (lower is better) Translates to: PCCSVSSCPRLK*RVFSPSQEPAN Trigger: GTTAGCTGGTTCCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR TCA 72 bp | TCCACAAAGGTTCTGAGGCTGGAGATATTTCTGCACTaGGTCTCTCCATGCTGCTCTGTGTCGTCTTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: STKVLRLEIFLH*VSPCCSVSSCP Trigger: GGGGCAAGACGACACAGAGCAGCATGGAGAGACTCAGTGCAGAAATATCTCCAGCCTCAGAACCTTTGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGCTTCATTTGAGACCCAGTGGGACATGCAGAAGCTTTCTCAAGGGGACAGGTGGCACAAATACCCTTaGCACAATCTCTCTTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: MASFETQWDMQKLSQGDRWHKYP*HNLSCP Trigger: AGGGCAAGAGAGATTGTGCAAAGGGTATTTGTGCCA...CCTGTCCCCTTGAGAAAGCTTCTGCATGTCCCACTGGGTCTCAAATGAAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR CCA 72 bp | CTTTGCATCAAAGGCTCCATCACCTGGTCCTATAAGTaGGATGTCATTGCAGCACATCTTAGTGTTGAGACT | + |
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Preference number: 3 (lower is better) Translates to: LCIKGSITWSYK*DVIAAHLSVET Trigger: AGTCTCAACACTAAGATGTGCTGCAATGACATCCCACTTATAGGACCAGGTGATGGAGCCTTTGATGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR TCA 72 bp | GCTTTCTCAAGGGGACAGGGCCTATGTATGTTGTATTaGGAGTCAAATTCAACTTTGCATCAAAGGCTCCAT | + |
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Preference number: 3 (lower is better) Translates to: AFSRGQGLCMLY*ESNSTLHQRLH Trigger: ATGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAATACAACATACATAGGCCCTGTCCCCTTGAGAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR CCA 72 bp | AACTTATTTCCCACTCTCACTGAGGACACAACTCTGTaGTACTGTATACCTTCTTGGCACAAATACCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: NLFPTLTEDTTL*YCIPSWHKYPL Trigger: CAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTCAGTGAGAGTGGGAAATAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR CCA 72 bp | AGTCAAATTCAACTTTGCATCAAAGGCTCCATCACCTaGTCCTATAAGTGGGATGTCATTGCAGCACATCTT | + |
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Preference number: 3 (lower is better) Translates to: SQIQLCIKGSIT*SYKWDVIAAHL Trigger: AAGATGTGCTGCAATGACATCCCACTTATAGGACCAGGTGATGGAGCCTTTGATGCAAAGTTGAATTTGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR-3UTR CAA 90 bp | AAATTAGAAACTTATTTCCCACTCTCACTGAGGACACAACTCTGTGGTACTGTATGGCACAAATACCCTTaGCACAATCTCTCTTGCCCT | + |
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Preference number: 3 (lower is better) Translates to: KLETYFPLSLRTQLCGTVWHKYP*HNLSCP Trigger: AGGGCAAGAGAGATTGTGCAAAGGGTATTTGTGCCA...TACAGTACCACAGAGTTGTGTCCTCAGTGAGAGTGGGAAATAAGTTTCTAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR CAA 90 bp | ACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCGTACTGTATACCTTCTaGGCACAAATACCCTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: TQLCGTVYLLGTNTLCTIVLYTF*AQIPFA Trigger: TGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTAC...GATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR GCA 72 bp | TGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTaGACAATCTCTCTTGCCCTCTCATGTAGACTTTTT | + |
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Preference number: 3 (lower is better) Translates to: CGTVYLLGTNTL*TISLALSCRLF Trigger: AAAAAGTCTACATGAGAGGGCAAGAGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR-3UTR CAA 90 bp | ATTGAGAGTCAAATTCAACTTTGCATCAAAGGCTCCATCACCTGGTCCTATAAGGTACTGTATACCTTCTaGGCACAAATACCCTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: IESQIQLCIKGSITWSYKVLYTF*AQIPFA Trigger: TGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTAC...CTTATAGGACCAGGTGATGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| 3UTR GCA 72 bp | ACAAAAACTTTCATGCCTAACTGGCGTCTAGTACGTTaGATACACTTCCTAGATATTTTGACAATAACCTTA | + |
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Preference number: 3 (lower is better) Translates to: TKTFMPNWRLVR*IHFLDILTITL Trigger: TAAGGTTATTGTCAAAATATCTAGGAAGTGTATGCAACGTACTAGACGCCAGTTAGGCATGAAAGTTTTTGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS-3UTR TCA 90 bp | CCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTGCCCCACTAAGTCGGTaGGCGCCAGCCAGCCAATGC | + |
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Preference number: 4 (lower is better) Translates to: PCCSVSSCPRLKCRVFSPAPLSR*APASQC Trigger: GCATTGGCTGGCTGGCGCTCACCGACTTAGTGGGGC...AGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR TCA 90 bp | TCTCCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTTGGCCGTCTCCGTGGTaGTTCTGCCCCACTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SPCCSVSSCPRLKCRVFSWPSPW*FCPTGR Trigger: GCGCCCAGTGGGGCAGAATCACCACGGAGACGGCCA...ACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR TCA 90 bp | TCTGCACTGAGTCTCTCCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGACTCCACATCAGGGCTaGGGAGCCTGGGCAGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: SALSLSMLLCVVLPPSQVTPHQG*GAWAGQ Trigger: TTGCCCTGCCCAGGCTCCTCAGCCCTGATGTGGAGT...CACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGAGACTCAGTGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
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| CDS-3UTR CCA 90 bp | TCTCCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTGCAGTACCGCGCGCGTaGCGCGAGTCTTCATGTGGC | + |
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Preference number: 4 (lower is better) Translates to: SPCCSVSSCPRLKCRVFSAVPRA*RESSCG Trigger: GCCACATGAAGACTCGCGCCACGCGCGCGGTACTGC...ACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CCA 90 bp | GCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGGCGCGAGTCTTCATGTaGCTGGCATACCAGTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: ALCRLAPVSSAESSVLHRARVFM*LAYQCG Trigger: GCCGCACTGGTATGCCAGCCACATGAAGACTCGCGC...CCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR GCA 90 bp | GAGGACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACCGCGGCGCCGGTAGCTaGGCGACACGAGCAGCATGG | + |
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Preference number: 4 (lower is better) Translates to: EDTTLWYCIPSWHKYPLHRGAGS*ATRAAW Trigger: CCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGCG...GTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCTCCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTGGCAGGGCAAGGAGGTaGAGCTGGAAGCATAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLSMLLCVVLPPSQVQSLGRARR*SWKHSW Trigger: CCAACTATGCTTCCAGCTCCACCTCCTTGCCCTGCC...AAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGAGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
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| CDS-3UTR CCA 90 bp | TCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGAAATGATCCCCATGAGCTaGATGGCCGTCTCCGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: SVSSCPRLKCRVFSPSQEMIPMS*MAVSVV Trigger: CACCACGGAGACGGCCATCCAGCTCATGGGGATCAT...TTCCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CCA 90 bp | AGTCTCTCCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGGGATCCAAGATCTaGTTCAGCGAAGCCAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: SLSMLLCVVLPPSQVQSLQGSKI*FSEARR Trigger: TCGCCTGGCTTCGCTGAACCAGATCTTGGATCCCTG...AAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGAGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| 3UTR CAA 72 bp | TCTGCACTGAGTCTCTCCATGCTGCTCTGTGTCGTCTaGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SALSLSMLLCVV*PPSQVQSLQSF Trigger: GAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGAGACTCAGTGCAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR TCA 90 bp | AACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTCTGGCCGTCTCCGTGGTaGTTCTGCCCCACTGGGCGC | + |
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Preference number: 4 (lower is better) Translates to: NSVVLYTFLAQIPFAQSLWPSPW*FCPTGR Trigger: GCGCCCAGTGGGGCAGAATCACCACGGAGACGGCCA...GAGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CCA 90 bp | CTCAAGTGCAGAGTCTTCAGTCCTTCACAGGAACCAGCTAACAACCAGACTCTCGAGTCTTCATGTGGCTaGCATACCAGTGCGGCGCAC | + |
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Preference number: 4 (lower is better) Translates to: LKCRVFSPSQEPANNQTLESSCG*HTSAAH Trigger: GTGCGCCGCACTGGTATGCCAGCCACATGAAGACTC...GAGAGTCTGGTTGTTAGCTGGTTCCTGTGAAGGACTGAAGACTCTGCACTTGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR TCA 90 bp | AACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTCGCCCCACTAAGTCGGTaGGCGCCAGCCAGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: NSVVLYTFLAQIPFAQSLAPLSR*APASQC Trigger: GCATTGGCTGGCTGGCGCTCACCGACTTAGTGGGGC...GAGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR TCA 90 bp | CTGAGGACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAGGTACACGAGGATaGCCACCGGGCTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRTQLCGTVYLLGTNTLCTGTRG*PPGWSG Trigger: TCCTGACCAGCCCGGTGGTCATCCTCGTGTACCTGT...GCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | AAATTAGAAACTTATTTCCCACTCTCACTGAGGACACAACTCTGTGGTACTGTACGCGGCGCCGGTAGCTaGGCGACACGAGCAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KLETYFPLSLRTQLCGTVRGAGS*ATRAAW Trigger: CCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGCG...TACAGTACCACAGAGTTGTGTCCTCAGTGAGAGTGGGAAATAAGTTTCTAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | GAGTCAGACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGAGGCTGAAGACTTCTTGCGCTTaGTCTCGCGGCGCCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ESDYQYMKVSMSTKVLRLKTSCA*SRGAGS Trigger: GCTACCGGCGCCGCGAGAGCAAGCGCAAGAAGTCTT...CAGCCTCAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTCTGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | GACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGAGGCTGGAGATAGGGCTGGTCAGGAGCTaGCCCACTAAGTCGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DYQYMKVSMSTKVLRLEIGLVRS*PTKSVS Trigger: GCTCACCGACTTAGTGGGGCAGCTCCTGACCAGCCC...TATCTCCAGCCTCAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR CCA 90 bp | ACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCGCGACACGAGCAGCATaGCCAGCGCGTTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: TQLCGTVYLLGTNTLCTIATRAA*PARCPR Trigger: TCGTGGGCAACGCGCTGGCCATGCTGCTCGTGTCGC...GATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR TCA 90 bp | AACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTCGGGACACCAGGGCTTTaGTGGTCGCCAGGTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSVVLYTFLAQIPFAQSLGTPGL*WSPGCR Trigger: CCTGCAACCTGGCGACCATCAAAGCCCTGGTGTCCC...GAGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | AAAATACTCAGTCATCCTTCCCTGGGAGAAGAAATTCTCAGACCCAGGGAAACAAAGACTTCTTGCGCTTaGTCTCGCGGCGCCGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KILSHPSLGEEILRPRETKTSCA*SRGAGS Trigger: GCTACCGGCGCCGCGAGAGCAAGCGCAAGAAGTCTT...TGTTTCCCTGGGTCTGAGAATTTCTTCTCCCAGGGAAGGATGACTGAGTATTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGAGTCAGACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGGCGACACGAGCAGCATaGCCAGCGCGTTGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LEESDYQYMKVSMSTKVLATRAA*PARCPR Trigger: TCGTGGGCAACGCGCTGGCCATGCTGCTCGTGTCGC...CAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTCTGACTCTTCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR TCA 90 bp | ATTGAGAGTCAAATTCAACTTTGCATCAAAGGCTCCATCACCTGGTCCTATAAGACAGGTACACGAGGATaGCCACCGGGCTGGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IESQIQLCIKGSITWSYKTGTRG*PPGWSG Trigger: TCCTGACCAGCCCGGTGGTCATCCTCGTGTACCTGT...CTTATAGGACCAGGTGATGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS-3UTR TCA 90 bp | TCTGCACTGAGTCTCTCCATGCTGCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAACCGACATCTGATTaGAGATCATTTTCAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: SALSLSMLLCVVLPPSQVQPTSD*RSFSTS Trigger: TGATGTTGAAAATGATCTTCAATCAGATGTCGGTTG...CACTTGAGACGGGGGCAAGACGACACAGAGCAGCATGGAGAGACTCAGTGCAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | AAATTAGAAACTTATTTCCCACTCTCACTGAGGACACAACTCTGTGGTACTGTAGGGCTGGTCAGGAGCTaGCCCACTAAGTCGGTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLETYFPLSLRTQLCGTVGLVRS*PTKSVS Trigger: GCTCACCGACTTAGTGGGGCAGCTCCTGACCAGCCC...TACAGTACCACAGAGTTGTGTCCTCAGTGAGAGTGGGAAATAAGTTTCTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTTTCTCAAGGGGACAGGGCCTATGTATGTTGTATTGAGAGTCAAATTCGAGTCTTCATGTGGCTaGCATACCAGTGCGGCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSFLKGTGPMYVVLRVKFESSCG*HTSAAH Trigger: GTGCGCCGCACTGGTATGCCAGCCACATGAAGACTC...GAATTTGACTCTCAATACAACATACATAGGCCCTGTCCCCTTGAGAAAGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS-3UTR CCA 90 bp | ATGTGGAAAGGAAATCAGTCTGAAGTTGAACTGAAAGCTTGTATCGAGTACTTTGCAGTACCGCGCGCGTaGCGCGAGTCTTCATGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MWKGNQSEVELKACIEYFAVPRA*RESSCG Trigger: GCCACATGAAGACTCGCGCCACGCGCGCGGTACTGC...AAAGTACTCGATACAAGCTTTCAGTTCAACTTCAGACTGATTTCCTTTCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS-3UTR TCA 90 bp | TCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGAATGCTCAACCGACATCTaGTTGAAGATCATTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVSSCPRLKCRVFSPSQECSTDI*LKIIFN Trigger: GTTGAAAATGATCTTCAATCAGATGTCGGTTGAGCA...TTCCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | GACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATGCGCCAGCCAGCCAATaGACAGCAGGAAAGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTTLWYCIPSWHKYPLHNAPASQ*TAGKTS Trigger: AGAAGTCTTTCCTGCTGTGCATTGGCTGGCTGGCGC...ATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | TCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGAACAATTAGAAAGGAATTaGACTCCTTCTCCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSSCPRLKCRVFSPSQEQLERN*TPSPFP Trigger: TGGGAAAGGAGAAGGAGTGCAATTCCTTTCTAATTG...TTCCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR CCA 90 bp | AAATTAGAAACTTATTTCCCACTCTCACTGAGGACACAACTCTGTGGTACTGTAATGATCCCCATGAGCTaGATGGCCGTCTCCGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KLETYFPLSLRTQLCGTVMIPMS*MAVSVV Trigger: CACCACGGAGACGGCCATCCAGCTCATGGGGATCAT...TACAGTACCACAGAGTTGTGTCCTCAGTGAGAGTGGGAAATAAGTTTCTAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| 3UTR CAA 72 bp | AAGGCTCCATCACCTGGTCCTATAAGTGGGATGTCATaGCAGCACATCTTAGTGTTGAGACTTGTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAPSPGPISGMS*QHILVLRLVEN Trigger: GTTCTCCACAAGTCTCAACACTAAGATGTGCTGCAATGACATCCCACTTATAGGACCAGGTGATGGAGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS-3UTR GCA 90 bp | GAGGACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACCAGGGAAACAGGTACTaGAATGAAAGTCCACTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EDTTLWYCIPSWHKYPLHQGNRY*NESPLQ Trigger: CTGAAGTGGACTTTCATTGCAGTACCTGTTTCCCTG...GTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS-3UTR CCA 90 bp | TTAGAAGAGTCAGACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGGTGTGGTCTCTGATCTaGCAGAACTTCCGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEESDYQYMKVSMSTKVLVWSLI*QNFRRR Trigger: CCTTCTTCGGAAGTTCTGCCAGATCAGAGACCACAC...CAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTCTGACTCTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
||
| 3UTR CAA 72 bp | GGAGTCAGAAGGGCAGGTGGAAGAAGGAAGAACAACTaGCTGGATTTACAAGCATGTAAGTGTGTACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GVRRAGGRRKNN*LDLQACKCVQD Trigger: ATCTTGTACACACTTACATGCTTGTAAATCCAGCAAGTTGTTCTTCCTTCTTCCACCTGCCCTTCTGACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS-3UTR CCA 90 bp | CAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTAGGTTGTTCATCATCTaGCAGAACTTCCGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QLCGTVYLLGTNTLCTISRLFII*QNFRRR Trigger: CCTTCTTCGGAAGTTCTGCCAGATGATGAACAACCT...AGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| 3UTR CAA 72 bp | AGCTTTCTCAAGGGGACAGGGCCTATGTATGTTGTATaGAGAGTCAAATTCAACTTTGCATCAAAGGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SFLKGTGPMYVV*RVKFNFASKAP Trigger: TGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAATACAACATACATAGGCCCTGTCCCCTTGAGAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS-3UTR TCA 90 bp | GAGTCAGACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGAGGCTGCAACCGACATCTGATTaGAGATCATTTTCAACATCA | + |
|
Preference number: 4 (lower is better) Translates to: ESDYQYMKVSMSTKVLRLQPTSD*RSFSTS Trigger: TGATGTTGAAAATGATCTTCAATCAGATGTCGGTTG...CAGCCTCAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTCTGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR TCA 90 bp | CAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTTGCTCAACCGACATCTaGTTGAAGATCATTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLCGTVYLLGTNTLCTISCSTDI*LKIIFN Trigger: GTTGAAAATGATCTTCAATCAGATGTCGGTTGAGCA...AGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTTTCTCAAGGGGACAGGGCCTATGTATGTTGTATTGAGAGTCAAATTCCAATTAGAAAGGAATTaGACTCCTTCTCCTTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSFLKGTGPMYVVLRVKFQLERN*TPSPFP Trigger: TGGGAAAGGAGAAGGAGTGCAATTCCTTTCTAATTG...GAATTTGACTCTCAATACAACATACATAGGCCCTGTCCCCTTGAGAAAGCTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| 3UTR CAA 72 bp | TCTTGTGATGATGAAATAGCAGATGACAGTTCGATATaGATGGAGGTGAGAGATGGACATTCCTCTGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCDDEIADDSSI*MEVRDGHSSDD Trigger: ATCATCAGAGGAATGTCCATCTCTCACCTCCATCAATATCGAACTGTCATCTGCTATTTCATCATCACAAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| 3UTR CAA 72 bp | TGGCGTCTAGTACGTTGCATACACTTCCTAGATATTTaGACAATAACCTTATGGGAAACACTATTTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRLVRCIHFLDI*TITLWETLFSG Trigger: ACCTGAAAATAGTGTTTCCCATAAGGTTATTGTCAAAATATCTAGGAAGTGTATGCAACGTACTAGACGCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
||
| CDS GCA 90 bp | GAGCCAGCAAGCCCAAGCAGGCGAAGGCGGAGGCAAAGGCCACGCTaGCCGGCTCGCGCGCAGGGTCTGTCTCGTTGCCCGCCGGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: EPASPSRRRRRQRPR*PARAQGLSRCPPAR Trigger: CCGGGCCGGCGGGCAACGAGACAGACCCTGCGCGCGAGCCGGGCAGCGTGGCCTTTGCCTCCGCCTTCGCCTGCTTGGGCTTGCTGGCTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS GCA 90 bp | AGTACCGCGCGCGTGGCGCGAGTCTTCATGTGGCTGGCATACCAGTaGGGCGCACGGATGGCCAGGGCGCGCTCCACGGCCATGGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: STARVARVFMWLAYQ*GARMARARSTAMAL Trigger: CAGCGCCATGGCCGTGGAGCGCGCCCTGGCCATCCGTGCGCCGCACTGGTATGCCAGCCACATGAAGACTCGCGCCACGCGCGCGGTACT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | TGGCGCGAGTCTTCATGTGGCTGGCATACCAGTGCGGCGCACGGATaGCCAGGGCGCGCTCCACGGCCATGGCGCTGGCCACCAGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: WRESSCGWHTSAAHG*PGRAPRPWRWPPGA Trigger: CGCTCCTGGTGGCCAGCGCCATGGCCGTGGAGCGCGCCCTGGCCATCCGTGCGCCGCACTGGTATGCCAGCCACATGAAGACTCGCGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | ACACGCCCAGCAGTACCGCGCGCGTGGCGCGAGTCTTCATGTGGCTaGCATACCAGTGCGGCGCACGGATGGCCAGGGCGCGCTCCACGG | + |
|
Preference number: 5 (lower is better) Translates to: TRPAVPRAWRESSCG*HTSAAHGWPGRAPR Trigger: CCGTGGAGCGCGCCCTGGCCATCCGTGCGCCGCACTGGTATGCCAGCCACATGAAGACTCGCGCCACGCGCGCGGTACTGCTGGGCGTGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | AGCCACACGCCCAGCAGTACCGCGCGCGTGGCGCGAGTCTTCATGTaGCTGGCATACCAGTGCGGCGCACGGATGGCCAGGGCGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SHTPSSTARVARVFM*LAYQCGARMARARS Trigger: GGAGCGCGCCCTGGCCATCCGTGCGCCGCACTGGTATGCCAGCCACATGAAGACTCGCGCCACGCGCGCGGTACTGCTGGGCGTGTGGCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | AGTGCGGCGCACGGATGGCCAGGGCGCGCTCCACGGCCATGGCGCTaGCCACCAGGAGCGAGGATAGCCCGAACACTGTCATGGTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAAHGWPGRAPRPWR*PPGARIARTLSWLA Trigger: GGCTAACCATGACAGTGTTCGGGCTATCCTCGCTCCTGGTGGCCAGCGCCATGGCCGTGGAGCGCGCCCTGGCCATCCGTGCGCCGCACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | CATACCAGTGCGGCGCACGGATGGCCAGGGCGCGCTCCACGGCCATaGCGCTGGCCACCAGGAGCGAGGATAGCCCGAACACTGTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: HTSAAHGWPGRAPRP*RWPPGARIARTLSW Trigger: CCATGACAGTGTTCGGGCTATCCTCGCTCCTGGTGGCCAGCGCCATGGCCGTGGAGCGCGCCCTGGCCATCCGTGCGCCGCACTGGTATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | CGAAGGCGAGCACAGACAGCCACACGCCCAGCAGTACCGCGCGCGTaGCGCGAGTCTTCATGTGGCTGGCATACCAGTGCGGCGCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: RRRAQTATRPAVPRA*RESSCGWHTSAAHG Trigger: TCCGTGCGCCGCACTGGTATGCCAGCCACATGAAGACTCGCGCCACGCGCGCGGTACTGCTGGGCGTGTGGCTGTCTGTGCTCGCCTTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS GCA 90 bp | ACAGCAGGAAAGACTTCTTGCGCTTGCTCTCGCGGCGCCGGTAGCTaGGCGACACGAGCAGCATGGCCAGCGCGTTGCCCACGAAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TAGKTSCACSRGAGS*ATRAAWPARCPRSQ Trigger: CTGGCTTCGTGGGCAACGCGCTGGCCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGCGAGAGCAAGCGCAAGAAGTCTTTCCTGCTGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS TCA 90 bp | ACTGCGAGACGGCGGCTTTGGCCCGACAGCGGGACACCAGGGCTTTaGTGGTCGCCAGGTTGCAGGCAAAGGTCACCACCAGAGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TARRRLWPDSGTPGL*WSPGCRQRSPPEPA Trigger: TGCTGGCTCTGGTGGTGACCTTTGCCTGCAACCTGGCGACCATCAAAGCCCTGGTGTCCCGCTGTCGGGCCAAAGCCGCCGTCTCGCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS GCA 90 bp | ATGGTTAGCCCGAAGAAGGTGCACAGACGCCCCGATGGGTCGAGCTaGTCCCAGCGTCGCTGTGACAGGTACACGAGGATGACCACCGGG | + |
|
Preference number: 5 (lower is better) Translates to: MVSPKKVHRRPDGSS*SQRRCDRYTRMTTG Trigger: CCCGGTGGTCATCCTCGTGTACCTGTCACAGCGACGCTGGGAGCAGCTCGACCCATCGGGGCGTCTGTGCACCTTCTTCGGGCTAACCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | CCATGGCGCTGGCCACCAGGAGCGAGGATAGCCCGAACACTGTCATaGTTAGCCCGAAGAAGGTGCACAGACGCCCCGATGGGTCGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PWRWPPGARIARTLS*LARRRCTDAPMGRA Trigger: AGCTCGACCCATCGGGGCGTCTGTGCACCTTCTTCGGGCTAACCATGACAGTGTTCGGGCTATCCTCGCTCCTGGTGGCCAGCGCCATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS CCA 90 bp | AGCGGCGACCAACAGACGGACAGCACACACATGATCCCCATGAGCTaGATGGCCGTCTCCGTGGTGATTCTGCCCCACTGGGCGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGDQQTDSTHMIPMS*MAVSVVILPHWALD Trigger: GTCCAGCGCCCAGTGGGGCAGAATCACCACGGAGACGGCCATCCAGCTCATGGGGATCATGTGTGTGCTGTCCGTCTGTTGGTCGCCGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS TCA 90 bp | GATGGGAAAGGCCACGGACACGGAGCCGCAGTCGTCGGTAGTACTTaGCAGGTTGCTGTGCGCTTCAGCAGAGTGCTCCGGCGCCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: DGKGHGHGAAVVGST*QVAVRFSRVLRRPH Trigger: ATGTGGGCGCCGGAGCACTCTGCTGAAGCGCACAGCAACCTGTCAAGTACTACCGACGACTGCGGCTCCGTGTCCGTGGCCTTTCCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR CAA 90 bp | GCTCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGGTAGTACTTGACAGGTaGCTGTGCGCTTCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ALCRLAPVSSAESSVLHRVVLDR*LCASAE Trigger: CTCTGCTGAAGCGCACAGCAACCTGTCAAGTACTAC...CCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
||
| CDS-3UTR CAA 90 bp | GACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGAGGCTGGAGATAAGCATGGCCAGCGCGTaGCCCACGAAGCCAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: DYQYMKVSMSTKVLRLEISMASA*PTKPVT Trigger: GGTCACTGGCTTCGTGGGCAACGCGCTGGCCATGCT...TATCTCCAGCCTCAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CAA 90 bp | TCAGACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGAGGCTGGAGCGGGACACCAGGGCTTaGATGGTCGCCAGGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SDYQYMKVSMSTKVLRLERDTRA*MVARLQ Trigger: CTGCAACCTGGCGACCATCAAAGCCCTGGTGTCCCG...CTCCAGCCTCAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 90 bp | GGCAGGGCAAGGAGGTGGAGCTGGAAGCATAGTTGGTGTGGTCTCTaGTCTGGCAGAACTTCCGAAGAAGGATCTTTCTTAGCAGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GRARRWSWKHSWCGL*SGRTSEEGSFLAAD Trigger: ATCTGCTGCTAAGAAAGATCCTTCTTCGGAAGTTCTGCCAGATCAGAGACCACACCAACTATGCTTCCAGCTCCACCTCCTTGCCCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
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| CDS-3UTR CAA 90 bp | CAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTAGCATGGCCAGCGCGTaGCCCACGAAGCCAGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QLCGTVYLLGTNTLCTISSMASA*PTKPVT Trigger: GGTCACTGGCTTCGTGGGCAACGCGCTGGCCATGCT...AGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CAA 90 bp | CAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTAGCAGGAAAGACTTCTaGCGCTTGCTCTCGCGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QLCGTVYLLGTNTLCTISSRKDF*RLLSRR Trigger: GCGCCGCGAGAGCAAGCGCAAGAAGTCTTTCCTGCT...AGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CAA 90 bp | ATTGAGAGTCAAATTCAACTTTGCATCAAAGGCTCCATCACCTGGTCCTATAAGCGGGACACCAGGGCTTaGATGGTCGCCAGGTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IESQIQLCIKGSITWSYKRDTRA*MVARLQ Trigger: CTGCAACCTGGCGACCATCAAAGCCCTGGTGTCCCG...CTTATAGGACCAGGTGATGGAGCCTTTGATGCAAAGTTGAATTTGACTCTCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS-3UTR CAA 90 bp | TCTGTGTCGTCTTGCCCCCGTCTCAAGTGCAGAGTCTTCAGTCCTTCACAGGAAGCAATTAGAAAGGAATaGCACTCCTTCTCCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSCPRLKCRVFSPSQEAIRKE*HSFSFP Trigger: GGGAAAGGAGAAGGAGTGCAATTCCTTTCTAATTGC...TTCCTGTGAAGGACTGAAGACTCTGCACTTGAGACGGGGGCAAGACGACACAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CAA 90 bp | TCAGACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGAGGCTGGAGGTAGTACTTGACAGGTaGCTGTGCGCTTCAGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDYQYMKVSMSTKVLRLEVVLDR*LCASAE Trigger: CTCTGCTGAAGCGCACAGCAACCTGTCAAGTACTAC...CTCCAGCCTCAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 90 bp | CCCTGGGAGAAGAAATTCTCAGACCCAGGGAAACAGGTACTGCAATaGAAGTCCACTTCAGGTTGTTCATCATCTGGCAGAACTTCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: PWEKKFSDPGKQVLQ*KSTSGCSSSGRTSE Trigger: TTCGGAAGTTCTGCCAGATGATGAACAACCTGAAGTGGACTTTCATTGCAGTACCTGTTTCCCTGGGTCTGAGAATTTCTTCTCCCAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS GCA 90 bp | TCCTTCCCTGGGAGAAGAAATTCTCAGACCCAGGGAAACAGGTACTaGAATGAAAGTCCACTTCAGGTTGTTCATCATCTGGCAGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: SFPGRRNSQTQGNRY*NESPLQVVHHLAEL Trigger: AAGTTCTGCCAGATGATGAACAACCTGAAGTGGACTTTCATTGCAGTACCTGTTTCCCTGGGTCTGAGAATTTCTTCTCCCAGGGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS-3UTR CAA 90 bp | CTGAGGACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCCATCTGTGTCTTGCATaGCTCAACCGACATCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: LRTQLCGTVYLLGTNTLCHLCLA*LNRHLI Trigger: AATCAGATGTCGGTTGAGCAATGCAAGACACAGATG...GCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CAA 90 bp | GAGGACACAACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAAAGTCCACTTCAGGTaGTTCATCATCTGGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EDTTLWYCIPSWHKYPLHKVHFR*FIIWQN Trigger: GTTCTGCCAGATGATGAACAACCTGAAGTGGACTTT...GTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTTGTGTCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS-3UTR CAA 90 bp | AACTCTGTGGTACTGTATACCTTCTTGGCACAAATACCCTTTGCACAATCTCTCTTTCCCATCTGTGTCTaGCATTGCTCAACCGACATC | + |
|
Preference number: 5 (lower is better) Translates to: NSVVLYTFLAQIPFAQSLFPICV*HCSTDI Trigger: GATGTCGGTTGAGCAATGCAAGACACAGATGGGAAA...GAGAGATTGTGCAAAGGGTATTTGTGCCAAGAAGGTATACAGTACCACAGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 90 bp | TCTCCTTTCCCATCTGTGTCTTGCATTGCTCAACCGACATCTGATTaGAGATCATTTTCAACATCATTATCAATAGCGGCGACCAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPFPSVSCIAQPTSD*RSFSTSLSIAATNR Trigger: TCTGTTGGTCGCCGCTATTGATAATGATGTTGAAAATGATCTTCAATCAGATGTCGGTTGAGCAATGCAAGACACAGATGGGAAAGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 90 bp | TCCTTCTCCTTTCCCATCTGTGTCTTGCATTGCTCAACCGACATCTaGTTGAAGATCATTTTCAACATCATTATCAATAGCGGCGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SFSFPICVLHCSTDI*LKIIFNIIINSGDQ Trigger: TTGGTCGCCGCTATTGATAATGATGTTGAAAATGATCTTCAATCAGATGTCGGTTGAGCAATGCAAGACACAGATGGGAAAGGAGAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS-3UTR CAA 90 bp | TTAGAAGAGTCAGACTATCAATACATGAAGGTGTCCATGTCCACAAAGGTTCTGGCAATTAGAAAGGAATaGCACTCCTTCTCCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LEESDYQYMKVSMSTKVLAIRKE*HSFSFP Trigger: GGGAAAGGAGAAGGAGTGCAATTCCTTTCTAATTGC...CAGAACCTTTGTGGACATGGACACCTTCATGTATTGATAGTCTGACTCTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CCA 72 bp | GCGGCGCACGGATGGCCAGGGCGCGCTCCACGGCCATaGCGCTGGCCACCAGGAGCGAGGATAGCCCGAACA | + |
|
Preference number: 6 (lower is better) Translates to: AAHGWPGRAPRP*RWPPGARIART Trigger: TGTTCGGGCTATCCTCGCTCCTGGTGGCCAGCGCCATGGCCGTGGAGCGCGCCCTGGCCATCCGTGCGCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CAA 72 bp | GCCACGCTGCCCGGCTCGCGCGCAGGGTCTGTCTCGTaGCCCGCCGGCCCGGTGCTGATGAAGCACCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: ATLPGSRAGSVS*PAGPVLMKHHV Trigger: CACGTGGTGCTTCATCAGCACCGGGCCGGCGGGCAACGAGACAGACCCTGCGCGCGAGCCGGGCAGCGTGGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CAA 90 bp | GAGGCAAAGGCCACGCTGCCCGGCTCGCGCGCAGGGTCTGTCTCGTaGCCCGCCGGCCCGGTGCTGATGAAGCACCACGTGCCCGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: EAKATLPGSRAGSVS*PAGPVLMKHHVPGH Trigger: GTGGCCGGGCACGTGGTGCTTCATCAGCACCGGGCCGGCGGGCAACGAGACAGACCCTGCGCGCGAGCCGGGCAGCGTGGCCTTTGCCTC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CCA 72 bp | CCCAGCAGTACCGCGCGCGTGGCGCGAGTCTTCATGTaGCTGGCATACCAGTGCGGCGCACGGATGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSSTARVARVFM*LAYQCGARMAR Trigger: CCTGGCCATCCGTGCGCCGCACTGGTATGCCAGCCACATGAAGACTCGCGCCACGCGCGCGGTACTGCTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 72 bp | ACGCCCCGATGGGTCGAGCTGCTCCCAGCGTCGCTGTaGCAGGTACACGAGGATGACCACCGGGCTGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: TPRWVELLPASL*QVHEDDHRAGQ Trigger: CTGACCAGCCCGGTGGTCATCCTCGTGTACCTGTCACAGCGACGCTGGGAGCAGCTCGACCCATCGGGGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS GCA 72 bp | AAGACTTCTTGCGCTTGCTCTCGCGGCGCCGGTAGCTaGGCGACACGAGCAGCATGGCCAGCGCGTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KTSCACSRGAGS*ATRAAWPARCP Trigger: TGGGCAACGCGCTGGCCATGCTGCTCGTGTCGCGCAGCTACCGGCGCCGCGAGAGCAAGCGCAAGAAGTCTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CCA 72 bp | GCACAGACAGCCACACGCCCAGCAGTACCGCGCGCGTaGCGCGAGTCTTCATGTGGCTGGCATACCAGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AQTATRPAVPRA*RESSCGWHTSA Trigger: CGCACTGGTATGCCAGCCACATGAAGACTCGCGCCACGCGCGCGGTACTGCTGGGCGTGTGGCTGTCTGTGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CAA 90 bp | GACTGCGAGACGGCGGCTTTGGCCCGACAGCGGGACACCAGGGCTTaGATGGTCGCCAGGTTGCAGGCAAAGGTCACCACCAGAGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DCETAALARQRDTRA*MVARLQAKVTTRAS Trigger: GCTGGCTCTGGTGGTGACCTTTGCCTGCAACCTGGCGACCATCAAAGCCCTGGTGTCCCGCTGTCGGGCCAAAGCCGCCGTCTCGCAGTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 72 bp | CGGCGGCTTTGGCCCGACAGCGGGACACCAGGGCTTTaGTGGTCGCCAGGTTGCAGGCAAAGGTCACCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RRLWPDSGTPGL*WSPGCRQRSPP Trigger: TGGTGGTGACCTTTGCCTGCAACCTGGCGACCATCAAAGCCCTGGTGTCCCGCTGTCGGGCCAAAGCCGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS GCA 72 bp | GCGCCAGCCAGCCAATGCACAGCAGGAAAGACTTCTTaGGCTTGCTCTCGCGGCGCCGGTAGCTGCGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: APASQCTAGKTS*ACSRGAGSCAT Trigger: TGTCGCGCAGCTACCGGCGCCGCGAGAGCAAGCGCAAGAAGTCTTTCCTGCTGTGCATTGGCTGGCTGGCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CAA 72 bp | ACGGCGGCTTTGGCCCGACAGCGGGACACCAGGGCTTaGATGGTCGCCAGGTTGCAGGCAAAGGTCACCACC | + |
|
Preference number: 6 (lower is better) Translates to: TAALARQRDTRA*MVARLQAKVTT Trigger: GGTGGTGACCTTTGCCTGCAACCTGGCGACCATCAAAGCCCTGGTGTCCCGCTGTCGGGCCAAAGCCGCCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 72 bp | CCACCGGGCTGGTCAGGAGCTGCCCCACTAAGTCGGTaGGCGCCAGCCAGCCAATGCACAGCAGGAAAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PPGWSGAAPLSR*APASQCTAGKT Trigger: AGTCTTTCCTGCTGTGCATTGGCTGGCTGGCGCTCACCGACTTAGTGGGGCAGCTCCTGACCAGCCCGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 72 bp | GCTGCTCCCAGCGTCGCTGTGACAGGTACACGAGGATaGCCACCGGGCTGGTCAGGAGCTGCCCCACTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AAPSVAVTGTRG*PPGWSGAAPLS Trigger: ACTTAGTGGGGCAGCTCCTGACCAGCCCGGTGGTCATCCTCGTGTACCTGTCACAGCGACGCTGGGAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS GCA 72 bp | GCCAGCCAATGCACAGCAGGAAAGACTTCTTGCGCTTaGTCTCGCGGCGCCGGTAGCTGCGCGACACGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ASQCTAGKTSCA*SRGAGSCATRA Trigger: TGCTCGTGTCGCGCAGCTACCGGCGCCGCGAGAGCAAGCGCAAGAAGTCTTTCCTGCTGTGCATTGGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS GCA 72 bp | AGGTACACGAGGATGACCACCGGGCTGGTCAGGAGCTaGCCCACTAAGTCGGTGAGCGCCAGCCAGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: RYTRMTTGLVRS*PTKSVSASQPM Trigger: CATTGGCTGGCTGGCGCTCACCGACTTAGTGGGGCAGCTCCTGACCAGCCCGGTGGTCATCCTCGTGTACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS GCA 72 bp | CCGAAGAAGGTGCACAGACGCCCCGATGGGTCGAGCTaGTCCCAGCGTCGCTGTGACAGGTACACGAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: PKKVHRRPDGSS*SQRRCDRYTRM Trigger: CATCCTCGTGTACCTGTCACAGCGACGCTGGGAGCAGCTCGACCCATCGGGGCGTCTGTGCACCTTCTTCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CAA 72 bp | GACACGGAGCCGCAGTCGTCGGTAGTACTTGACAGGTaGCTGTGCGCTTCAGCAGAGTGCTCCGGCGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: DTEPQSSVVLDR*LCASAECSGAH Trigger: GTGGGCGCCGGAGCACTCTGCTGAAGCGCACAGCAACCTGTCAAGTACTACCGACGACTGCGGCTCCGTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS CCA 72 bp | CAACAGACGGACAGCACACACATGATCCCCATGAGCTaGATGGCCGTCTCCGTGGTGATTCTGCCCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: QQTDSTHMIPMS*MAVSVVILPHW Trigger: CCAGTGGGGCAGAATCACCACGGAGACGGCCATCCAGCTCATGGGGATCATGTGTGTGCTGTCCGTCTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041175.13 ENSMUST00000173533.2 |
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| CDS TCA 72 bp | AGGAGGTGGAGCTGGAAGCATAGTTGGTGTGGTCTCTaGTCTGGCAGAACTTCCGAAGAAGGATCTTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: RRWSWKHSWCGL*SGRTSEEGSFL Trigger: TAAGAAAGATCCTTCTTCGGAAGTTCTGCCAGATCAGAGACCACACCAACTATGCTTCCAGCTCCACCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173533.2 |
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| CDS CAA 90 bp | CTCAGACCCAGGGAAACAGGTACTGCAATGAAAGTCCACTTCAGGTaGTTCATCATCTGGCAGAACTTCCGAAGAAGGATCTTTCTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRPRETGTAMKVHFR*FIIWQNFRRRIFLS Trigger: GCTAAGAAAGATCCTTCTTCGGAAGTTCTGCCAGATGATGAACAACCTGAAGTGGACTTTCATTGCAGTACCTGTTTCCCTGGGTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS GCA 72 bp | GGGAGAAGAAATTCTCAGACCCAGGGAAACAGGTACTaGAATGAAAGTCCACTTCAGGTTGTTCATCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRRNSQTQGNRY*NESPLQVVHHL Trigger: CAGATGATGAACAACCTGAAGTGGACTTTCATTGCAGTACCTGTTTCCCTGGGTCTGAGAATTTCTTCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS CAA 72 bp | AGGGAAACAGGTACTGCAATGAAAGTCCACTTCAGGTaGTTCATCATCTGGCAGAACTTCCGAAGAAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: RETGTAMKVHFR*FIIWQNFRRRI Trigger: GATCCTTCTTCGGAAGTTCTGCCAGATGATGAACAACCTGAAGTGGACTTTCATTGCAGTACCTGTTTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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| CDS CCA 72 bp | ACTGCAATGAAAGTCCACTTCAGGTTGTTCATCATCTaGCAGAACTTCCGAAGAAGGATCTTTCTTAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TAMKVHFRLFII*QNFRRRIFLSS Trigger: GCTGCTAAGAAAGATCCTTCTTCGGAAGTTCTGCCAGATGATGAACAACCTGAAGTGGACTTTCATTGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041175.13 |
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