Pregenerated sensors for PTGER2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037759Ensembl transcript IDs: ENSMUST00000046891.6
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TTTATATCCTCTGACACTTTCCACAAAGGGCTCTGTCATCACATCTaGAGCCCAAACTACCTCATAAAGTCTGTTTCATCTGCTTCTCAG | + |
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Preference number: 1 (lower is better) Translates to: FISSDTFHKGLCHHI*SPNYLIKSVSSASQ Trigger: CTGAGAAGCAGATGAAACAGACTTTATGAGGTAGTTTGGGCTGCAGATGTGATGACAGAGCCCTTTGTGGAAAGTGTCAGAGGATATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR CCA 90 bp | AGAAATTTCTGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTaGCATGCAACACCGGGTGAAGAGGTGGCATTTATTTATACCTGC | + |
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Preference number: 1 (lower is better) Translates to: RNFCFSVILPLNVIS*HATPGEEVAFIYTC Trigger: GCAGGTATAAATAAATGCCACCTCTTCACCCGGTGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCAGAAATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR-3UTR TCA 90 bp | TGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTGGCATGCAACACCGGGTGAACTTTATATCCTCTaGCACTTTCCACAAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CFSVILPLNVISWHATPGELYIL*HFPQRA Trigger: AGCCCTTTGTGGAAAGTGTCAGAGGATATAAAGTTC...ACCCGGTGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR-3UTR GCA 90 bp | AATTTCTGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTGGCATGCAACACATGTCTACATTAACTaGAAACTGTCCTTGGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: NFCFSVILPLNVISWHATHVYIN*KLSLGS Trigger: ACTCCCCAAGGACAGTTTGCAGTTAATGTAGACATG...TGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCAGAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR-3UTR GCA 90 bp | ACCAACACTAGAAGGATTCTAGAGAACCTGAAAAATAGACTTGAATTTTCAGAGTTCATTTGGTCTGATTaGATTTATAACAGCAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: TNTRRILENLKNRLEFSEFIWSD*IYNSSD Trigger: GTCACTGCTGTTATAAATGCAATCAGACCAAATGAA...CTCTGAAAATTCAAGTCTATTTTTCAGGTTCTCTAGAATCCTTCTAGTGTTGGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR TCA 72 bp | CAGTGCATCCTTTCGTTACCAGAGAGGACTCCCACATaGACGCGCACAGTAAAAGGGGCCAATGGCATTCAA | + |
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Preference number: 3 (lower is better) Translates to: QCILSLPERTPT*TRTVKGANGIQ Trigger: TTGAATGCCATTGGCCCCTTTTACTGTGCGCGTTCATGTGGGAGTCCTCTCTGGTAACGAAAGGATGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR CCA 72 bp | TGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTaGCATGCAACACCGGGTGAAGAGGTGGCATTTATT | + |
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Preference number: 3 (lower is better) Translates to: CFSVILPLNVIS*HATPGEEVAFI Trigger: AATAAATGCCACCTCTTCACCCGGTGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR TCA 72 bp | AGACGCAGCCGATTGTCCTTCAAAGGTCACATAATGTaGACTTTATATCCTCTGACACTTTCCACAAAGGGC | + |
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Preference number: 3 (lower is better) Translates to: RRSRLSFKGHIM*TLYPLTLSTKG Trigger: GCCCTTTGTGGAAAGTGTCAGAGGATATAAAGTTCACATTATGTGACCTTTGAAGGACAATCGGCTGCGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR TCA 72 bp | CCCCCTGAATGTAATTTCTTGGCATGCAACACCGGGTaGAGAGGTGGCATTTATTTATACCTGCCTAGATTT | + |
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Preference number: 3 (lower is better) Translates to: PPECNFLACNTG*RGGIYLYLPRF Trigger: AAATCTAGGCAGGTATAAATAAATGCCACCTCTTCACCCGGTGTTGCATGCCAAGAAATTACATTCAGGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR TCA 72 bp | AGCAACTTGTCTGCTCTGGTTGCTTCATCGCTTGCATaGGTTGACTTCCTAGAGAATGAATTTCATTTGGTC | + |
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Preference number: 3 (lower is better) Translates to: SNLSALVASSLA*VDFLENEFHLV Trigger: GACCAAATGAAATTCATTCTCTAGGAAGTCAACTCATGCAAGCGATGAAGCAACCAGAGCAGACAAGTTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR-3UTR CAA 90 bp | GTTTGCCGTGGCACAATCAAACATCTTGTAGTGTATGTGTATGTTAGTTATGTCACAAAACCACATGCTTaGTCACTCAACAGGAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VCRGTIKHLVVYVYVSYVTKPHA*SLNRKA Trigger: AGCTTTCCTGTTGAGTGACAAAGCATGTGGTTTTGT...GACATAACTAACATACACATACACTACAAGATGTTTGATTGTGCCACGGCAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR GCA 72 bp | ATATGTTCCCTCAATAAAAATACAGACAAAAGCGTTTaGCGTGGCACAATCAAACATCTTGTAGTGTATGTG | + |
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Preference number: 3 (lower is better) Translates to: ICSLNKNTDKSV*RGTIKHLVVYV Trigger: CACATACACTACAAGATGTTTGATTGTGCCACGGCAAACGCTTTTGTCTGTATTTTTATTGAGGGAACATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| 3UTR GCA 72 bp | ACAACGACATCTGATAAAAGGAATCAAAATTCCAGGTaGAAAGTAACCAGAAATTTCTGCTTCAGTGTCATT | + |
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Preference number: 3 (lower is better) Translates to: TTTSDKRNQNSR*KVTRNFCFSVI Trigger: AATGACACTGAAGCAGAAATTTCTGGTTACTTTGCACCTGGAATTTTGATTCCTTTTATCAGATGTCGTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR GCA 90 bp | GCCCCTTACACTTCTCCAATGAGGCCATTTAAAGACTTCTTCAGAGGTTCCCTCGCGGCGCGCCAACAGTaGCAGTGCGATGAGATTCCC | + |
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Preference number: 4 (lower is better) Translates to: APYTSPMRPFKDFFRGSLAARQQ*QCDEIP Trigger: GGGAATCTCATCGCACTGGCACTGTTGGCGCGCCGC...GAGGGAACCTCTGAAGAAGTCTTTAAATGGCCTCATTGGAGAAGTGTAAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR TCA 90 bp | ATCTGCAGCCCAAACTACCTCATAAAGTCTGTTTCATCTGCTTCTCAGGGCAAGAGGAGGCCCCATAGATaGCAGGCAGCACCGCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: ICSPNYLIKSVSSASQGKRRPHR*QAAPPD Trigger: GTCTGGCGGTGCTGCCTGTCATCTATGGGGCCTCCT...CTTGCCCTGAGAAGCAGATGAAACAGACTTTATGAGGTAGTTTGGGCTGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR CCA 90 bp | TGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTGGCATGCAACACCGGGTGCCAGGAGAATGAGGTaGTCCGTCTCCTCTGCCATC | + |
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Preference number: 4 (lower is better) Translates to: CFSVILPLNVISWHATPGARRMR*SVSSAI Trigger: GATGGCAGAGGAGACGGACCACCTCATTCTCCTGGC...ACCCGGTGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR CCA 90 bp | TGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTGGCATGCAACACCGGGTGCAGCAGGAGCATCGTaGCGTACAGCTGAAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: CFSVILPLNVISWHATPGAAGAS*RTAEGM Trigger: CATACCTTCAGCTGTACGCCACGATGCTCCTGCTGC...ACCCGGTGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR TCA 90 bp | GTTTGCCGTGGCACAATCAAACATCTTGTAGTGTATGTGTATGTTAGTTATGTCAGAACATCACCGAGCTaGTGGCTGGGCTTTCCCCCG | + |
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Preference number: 4 (lower is better) Translates to: VCRGTIKHLVVYVYVSYVRTSPS*WLGFPP Trigger: CGGGGGAAAGCCCAGCCATCAGCTCGGTGATGTTCT...GACATAACTAACATACACATACACTACAAGATGTTTGATTGTGCCACGGCAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR TCA 90 bp | AATTTCTGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTGGCATGCAACAATCGTGGCGTACAGCTaGAGGTATGCAGTCCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: NFCFSVILPLNVISWHATIVAYS*RYAVLP Trigger: CGGGAGGACTGCATACCTTCAGCTGTACGCCACGAT...TGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCAGAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR TCA 90 bp | TGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTGGCATGCAACACCGGGTTTCTTGTGTTCTCAGTaGAGTCCGACAACAGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: CFSVILPLNVISWHATPGFLCSQ*SPTTED Trigger: GTCCTCTGTTGTCGGACTTCACTGAGAACACAAGAA...ACCCGGTGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR GCA 90 bp | GTTTGCCGTGGCACAATCAAACATCTTGTAGTGTATGTGTATGTTAGTTATGTCCGCAGCGGCTTCTTCTaGTCCGACGGTGCATGCGAA | + |
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Preference number: 4 (lower is better) Translates to: VCRGTIKHLVVYVYVSYVRSGFF*SDGACE Trigger: TTCGCATGCACCGTCGGAGCAGAAGAAGCCGCTGCG...GACATAACTAACATACACATACACTACAAGATGTTTGATTGTGCCACGGCAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR GCA 90 bp | CCCTCAATAAAAATACAGACAAAAGCGTTTGCCGTGGCACAATCAAACATCTTGTCCTCTCTCCTCTCCTaGGAGATCCAGGGCCTCTTA | + |
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Preference number: 4 (lower is better) Translates to: PSIKIQTKAFAVAQSNILSSLLS*EIQGLL Trigger: TAAGAGGCCCTGGATCTCGCAGGAGAGGAGAGAGGA...CAAGATGTTTGATTGTGCCACGGCAAACGCTTTTGTCTGTATTTTTATTGAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR CCA 90 bp | AATTTCTGCTTCAGTGTCATTCTCCCCCTGAATGTAATTTCTTGGCATGCAACAAGTAAGGGTACCCGATaGAGAGGTAGCGTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: NFCFSVILPLNVISWHATSKGTR*RGSVPG Trigger: CCCTGGAACGCTACCTCTCCATCGGGTACCCTTACT...TGTTGCATGCCAAGAAATTACATTCAGGGGGAGAATGACACTGAAGCAGAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR GCA 90 bp | AAATATGTTCCCTCAATAAAAATACAGACAAAAGCGTTTGCCGTGGCACAATCAGTACAGCTGAAGGTATaGAGTCCTCCCGTGCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: KYVPSIKIQTKAFAVAQSVQLKV*SPPVPD Trigger: ATCCGGCACGGGAGGACTGCATACCTTCAGCTGTAC...TGATTGTGCCACGGCAAACGCTTTTGTCTGTATTTTTATTGAGGGAACATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR GCA 90 bp | ACCAACACTAGAAGGATTCTAGAGAACCTGAAAAATAGACTTGAATTTTCAGAGCGCCAACAGTGCCAGTaGGATGAGATTCCCCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: TNTRRILENLKNRLEFSERQQCQ*DEIPQN Trigger: GTTCTGGGGAATCTCATCGCACTGGCACTGTTGGCG...CTCTGAAAATTCAAGTCTATTTTTCAGGTTCTCTAGAATCCTTCTAGTGTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR CCA 90 bp | CCCTCAATAAAAATACAGACAAAAGCGTTTGCCGTGGCACAATCAAACATCTTGTTACTGGCACTGGACTaGGTAGAACAGGATGTTTGC | + |
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Preference number: 4 (lower is better) Translates to: PSIKIQTKAFAVAQSNILLLALD*VEQDVC Trigger: GCAAACATCCTGTTCTACCCAGTCCAGTGCCAGTAA...CAAGATGTTTGATTGTGCCACGGCAAACGCTTTTGTCTGTATTTTTATTGAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 90 bp | AAGTCCTCTCTCCTCTCCTGCGAGATCCAGGGCCTCTTAGGCTACTaGCAGACAATCCGCAGCGGCTTCTTCTGCTCCGACGGTGCATGC | + |
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Preference number: 5 (lower is better) Translates to: KSSLLSCEIQGLLGY*QTIRSGFFCSDGAC Trigger: GCATGCACCGTCGGAGCAGAAGAAGCCGCTGCGGATTGTCTGGCAGTAGCCTAAGAGGCCCTGGATCTCGCAGGAGAGGAGAGAGGACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 90 bp | CAGGTTCCCAGCAGGTCAGTGAGCACCAATTCCGTTACCAGCACGTaGAACAAGGAGATAGAGGTCCTGCTGCCGGCGCTACACCCGGTG | + |
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Preference number: 5 (lower is better) Translates to: QVPSRSVSTNSVTST*NKEIEVLLPALHPV Trigger: CACCGGGTGTAGCGCCGGCAGCAGGACCTCTATCTCCTTGTTTCACGTGCTGGTAACGGAATTGGTGCTCACTGACCTGCTGGGAACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 90 bp | GCGAGCACAGCCACGATAAGCAGCAGGAGCATCGTGGCGTACAGCTaGAGGTATGCAGTCCTCCCGTGCCGGATAAAGCACCATGTCCCA | + |
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Preference number: 5 (lower is better) Translates to: ASTATISSRSIVAYS*RYAVLPCRIKHHVP Trigger: TGGGACATGGTGCTTTATCCGGCACGGGAGGACTGCATACCTTCAGCTGTACGCCACGATGCTCCTGCTGCTTATCGTGGCTGTGCTCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 90 bp | AGGCTACTGCCAGACAATCCGCAGCGGCTTCTTCTGCTCCGACGGTaGATGCGAATGAGGTTGAGGATAACGCTGATGTTGCAGGCGAGC | + |
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Preference number: 5 (lower is better) Translates to: RLLPDNPQRLLLLRR*MRMRLRITLMLQAS Trigger: GCTCGCCTGCAACATCAGCGTTATCCTCAACCTCATTCGCATGCACCGTCGGAGCAGAAGAAGCCGCTGCGGATTGTCTGGCAGTAGCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 90 bp | GGTGATGGTCATAATGGCCAGGAGAATGAGGTGGTCCGTCTCCTCTaGCATCGAAGTCCTCTCTCCTCTCCTGCGAGATCCAGGGCCTCT | + |
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Preference number: 5 (lower is better) Translates to: GDGHNGQENEVVRLL*HRSPLSSPARSRAS Trigger: AGAGGCCCTGGATCTCGCAGGAGAGGAGAGAGGACTTCGATGGCAGAGGAGACGGACCACCTCATTCTCCTGGCCATTATGACCATCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 90 bp | AGCCACGATAAGCAGCAGGAGCATCGTGGCGTACAGCTGAAGGTATaGAGTCCTCCCGTGCCGGATAAAGCACCATGTCCCAGGACAGTA | + |
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Preference number: 5 (lower is better) Translates to: SHDKQQEHRGVQLKV*SPPVPDKAPCPRTV Trigger: TACTGTCCTGGGACATGGTGCTTTATCCGGCACGGGAGGACTGCATACCTTCAGCTGTACGCCACGATGCTCCTGCTGCTTATCGTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 90 bp | TCAGTCTGTTTACTGGCACTGGACTGGGTAGAACAGGATGTTTGCTaGGCTTCTTGTGTTCTCAGTGAAGTCCGACAACAGAGGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: SVCLLALDWVEQDVC*ASCVLSEVRQQRTE Trigger: CTCAGTCCTCTGTTGTCGGACTTCACTGAGAACACAAGAAGCTCAGCAAACATCCTGTTCTACCCAGTCCAGTGCCAGTAAACAGACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS-3UTR CAA 90 bp | AAATATGTTCCCTCAATAAAAATACAGACAAAAGCGTTTGCCGTGGCACAATCACAGTCCTCCATTAGCTaGGAGTCATTAAGAAAATTG | + |
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Preference number: 5 (lower is better) Translates to: KYVPSIKIQTKAFAVAQSQSSIS*ESLRKL Trigger: CAATTTTCTTAATGACTCCAAGCTAATGGAGGACTG...TGATTGTGCCACGGCAAACGCTTTTGTCTGTATTTTTATTGAGGGAACATATTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 72 bp | GCGGCAGGGAACAGAAGAGCAAGGAGGCCCCATAGATaGCAGGCAGCACCGCCAGACCCCCGCGGCGCGATA | + |
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Preference number: 6 (lower is better) Translates to: AAGNRRARRPHR*QAAPPDPRGAI Trigger: TATCGCGCCGCGGGGGTCTGGCGGTGCTGCCTGTCATCTATGGGGCCTCCTTGCTCTTCTGTTCCCTGCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 72 bp | CTCCTCTCCTGCGAGATCCAGGGCCTCTTAGGCTACTaGCAGACAATCCGCAGCGGCTTCTTCTGCTCCGAC | + |
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Preference number: 6 (lower is better) Translates to: LLSCEIQGLLGY*QTIRSGFFCSD Trigger: GTCGGAGCAGAAGAAGCCGCTGCGGATTGTCTGGCAGTAGCCTAAGAGGCCCTGGATCTCGCAGGAGAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS CCA 72 bp | CAGAACCCCGGCCGAGAACATCACCGAGCTGATGGCTaGGCTTTCCCCCGAAAGGAGCCACTGACGACTCTT | + |
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Preference number: 6 (lower is better) Translates to: QNPGREHHRADG*AFPRKEPLTTL Trigger: AAGAGTCGTCAGTGGCTCCTTTCGGGGGAAAGCCCAGCCATCAGCTCGGTGATGTTCTCGGCCGGGGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 72 bp | ATGTCCCAGGACAGTACTGGACGTACTCCCCGTAGTTaGGCAGCGGCAGGGAACAGAAGAGCAAGGAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: MSQDSTGRTPRS*AAAGNRRARRP Trigger: GGGCCTCCTTGCTCTTCTGTTCCCTGCCGCTGCTCAACTACGGGGAGTACGTCCAGTACTGTCCTGGGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 72 bp | CCGTCTCCTCTGCCATCGAAGTCCTCTCTCCTCTCCTaGGAGATCCAGGGCCTCTTAGGCTACTGCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: PSPLPSKSSLLS*EIQGLLGYCQT Trigger: TGTCTGGCAGTAGCCTAAGAGGCCCTGGATCTCGCAGGAGAGGAGAGAGGACTTCGATGGCAGAGGAGACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS CAA 90 bp | CTGCTCCGACGGTGCATGCGAATGAGGTTGAGGATAACGCTGATGTaGCAGGCGAGCACAGCCACGATAAGCAGCAGGAGCATCGTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LLRRCMRMRLRITLM*QASTATISSRSIVA Trigger: CGCCACGATGCTCCTGCTGCTTATCGTGGCTGTGCTCGCCTGCAACATCAGCGTTATCCTCAACCTCATTCGCATGCACCGTCGGAGCAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 72 bp | GCCACGATAAGCAGCAGGAGCATCGTGGCGTACAGCTaGAGGTATGCAGTCCTCCCGTGCCGGATAAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: ATISSRSIVAYS*RYAVLPCRIKH Trigger: GTGCTTTATCCGGCACGGGAGGACTGCATACCTTCAGCTGTACGCCACGATGCTCCTGCTGCTTATCGTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS CAA 72 bp | CGGCTTCTTCTGCTCCGACGGTGCATGCGAATGAGGTaGAGGATAACGCTGATGTTGCAGGCGAGCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RLLLLRRCMRMR*RITLMLQASTA Trigger: GGCTGTGCTCGCCTGCAACATCAGCGTTATCCTCAACCTCATTCGCATGCACCGTCGGAGCAGAAGAAGCCG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS CAA 90 bp | AATCCGCAGCGGCTTCTTCTGCTCCGACGGTGCATGCGAATGAGGTaGAGGATAACGCTGATGTTGCAGGCGAGCACAGCCACGATAAGC | + |
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Preference number: 6 (lower is better) Translates to: NPQRLLLLRRCMRMR*RITLMLQASTATIS Trigger: GCTTATCGTGGCTGTGCTCGCCTGCAACATCAGCGTTATCCTCAACCTCATTCGCATGCACCGTCGGAGCAGAAGAAGCCGCTGCGGATT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 72 bp | CATAATGGCCAGGAGAATGAGGTGGTCCGTCTCCTCTaGCATCGAAGTCCTCTCTCCTCTCCTGCGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: HNGQENEVVRLL*HRSPLSSPARS Trigger: GGATCTCGCAGGAGAGGAGAGAGGACTTCGATGGCAGAGGAGACGGACCACCTCATTCTCCTGGCCATTATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS CAA 72 bp | CGGTGCATGCGAATGAGGTTGAGGATAACGCTGATGTaGCAGGCGAGCACAGCCACGATAAGCAGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: RCMRMRLRITLM*QASTATISSRS Trigger: GCTCCTGCTGCTTATCGTGGCTGTGCTCGCCTGCAACATCAGCGTTATCCTCAACCTCATTCGCATGCACCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 72 bp | AGCAGGTCAGTGAGCACCAATTCCGTTACCAGCACGTaGAACAAGGAGATAGAGGTCCTGCTGCCGGCGCTA | + |
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Preference number: 6 (lower is better) Translates to: SRSVSTNSVTST*NKEIEVLLPAL Trigger: TAGCGCCGGCAGCAGGACCTCTATCTCCTTGTTTCACGTGCTGGTAACGGAATTGGTGCTCACTGACCTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS GCA 72 bp | CCAGACAATCCGCAGCGGCTTCTTCTGCTCCGACGGTaGATGCGAATGAGGTTGAGGATAACGCTGATGTTG | + |
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Preference number: 6 (lower is better) Translates to: PDNPQRLLLLRR*MRMRLRITLML Trigger: CAACATCAGCGTTATCCTCAACCTCATTCGCATGCACCGTCGGAGCAGAAGAAGCCGCTGCGGATTGTCTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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| CDS TCA 72 bp | TTACTGGCACTGGACTGGGTAGAACAGGATGTTTGCTaGGCTTCTTGTGTTCTCAGTGAAGTCCGACAACAG | + |
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Preference number: 6 (lower is better) Translates to: LLALDWVEQDVC*ASCVLSEVRQQ Trigger: CTGTTGTCGGACTTCACTGAGAACACAAGAAGCTCAGCAAACATCCTGTTCTACCCAGTCCAGTGCCAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046891.6 |
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