Pregenerated sensors for PTGER1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019464Ensembl transcript IDs: ENSMUST00000019608.7
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACGTGTTCTCAGAGCCTCGGGCTGTGTGAGTCTATCCCAGCACCATaGCCCTCCTGCACACCACCCGAGGCCCCGCCTTTCTGCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: TCSQSLGLCESIPAP*PSCTPPEAPPFCPT Trigger: GGTGGGGCAGAAAGGCGGGGCCTCGGGTGGTGTGCAGGAGGGGCATGGTGCTGGGATAGACTCACACAGCCCGAGGCTCTGAGAACACGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | CCTCTCCACAGTCTCTGGGCTGGGATGTCCTGCTGGCCCGCCGCTTaGCTCCACCCTTCGTGCCTACACTTTCAGGGCGCACAGATGTCA | + |
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Preference number: 1 (lower is better) Translates to: PLHSLWAGMSCWPAA*LHPSCLHFQGAQMS Trigger: TGACATCTGTGCGCCCTGAAAGTGTAGGCACGAAGGGTGGAGGCAAGCGGCGGGCCAGCAGGACATCCCAGCCCAGAGACTGTGGAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR TCA 90 bp | GTCGTCGGTCTGCTTGTCTGCGGGCTGGGCTTGCCGTCCTCTCACTaGCAGGGAGGGAAGCCTCTCACCACTGATCAGACCCCATGCTTC | + |
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Preference number: 1 (lower is better) Translates to: VVGLLVCGLGLPSSH*QGGKPLTTDQTPCF Trigger: GAAGCATGGGGTCTGATCAGTGGTGAGAGGCTTCCCTCCCTGTCAGTGAGAGGACGGCAAGCCCAGCCCGCAGACAAGCAGACCGACGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR CCA 90 bp | CTCAAAGTCCATCATGACTCACTCTGTCCCCCTCTCCACAGTCTCTaGGCTGGGATGTCCTGCTGGCCCGCCGCTTGCCTCCACCCTTCG | + |
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Preference number: 1 (lower is better) Translates to: LKVHHDSLCPPLHSL*AGMSCWPAACLHPS Trigger: CGAAGGGTGGAGGCAAGCGGCGGGCCAGCAGGACATCCCAGCCCAGAGACTGTGGAGAGGGGGACAGAGTGAGTCATGATGGACTTTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | TGGGAAGGGGTCTCGGGACTGGACTCAGATATAGATCAACTCCTGTaGATGCTCACAGCTACTGCGGAGGAACCCGGAGCGGAGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: WEGVSGLDSDIDQLL*MLTATAEEPGAEAG Trigger: CCCAGCCTCCGCTCCGGGTTCCTCCGCAGTAGCTGTGAGCATGCACAGGAGTTGATCTATATCTGAGTCCAGTCCCGAGACCCCTTCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | ACTGGACTCAGATATAGATCAACTCCTGTGCATGCTCACAGCTACTaGGGAGGAACCCGGAGCGGAGGCTGGGGTCCACTGAGCGCGATG | + |
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Preference number: 1 (lower is better) Translates to: TGLRYRSTPVHAHSY*GGTRSGGWGPLSAM Trigger: CATCGCGCTCAGTGGACCCCAGCCTCCGCTCCGGGTTCCTCCGCAGTAGCTGTGAGCATGCACAGGAGTTGATCTATATCTGAGTCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | GGTCAGGGACTTTGGTGCCTGAGGAACCAGGCTTGTGCGATCTTATaGATCTCCGCAGCTTCTATTCGGCCTGTGTGGTGCTGGGACTGC | + |
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Preference number: 1 (lower is better) Translates to: GQGLWCLRNQACAIL*ISAASIRPVWCWDC Trigger: GCAGTCCCAGCACCACACAGGCCGAATAGAAGCTGCGGAGATGCATAAGATCGCACAAGCCTGGTTCCTCAGGCACCAAAGTCCCTGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | TCCATACATGCATTTTCAGCCTCTGTGTGCATCTGGACTGGAGTGTaGTTGGAGCAGGTGACAGAGGCAAGGCAGACTCTTGGGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: SIHAFSASVCIWTGV*LEQVTEARQTLGGR Trigger: CCTGCCCCCAAGAGTCTGCCTTGCCTCTGTCACCTGCTCCAAGCACACTCCAGTCCAGATGCACACAGAGGCTGAAAATGCATGTATGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR TCA 90 bp | CTTGGAGCAGGTGACAGAGGCAAGGCAGACTCTTGGGGGCAGGACTaGTGGGGCACATTTGAAAGGTCAAGATGGGAACATGCAGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: LGAGDRGKADSWGQD*WGTFERSRWEHAVV Trigger: CACTACTGCATGTTCCCATCTTGACCTTTCAAATGTGCCCCATCAGTCCTGCCCCCAAGAGTCTGCCTTGCCTCTGTCACCTGCTCCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | TCCATGAACACAAGATTGTCTACAGGTGTGTACGTGAGAATGTTCTaGCCACAGACTGGACATGGTCAAGCTCTGCACAGAGCCCCGATC | + |
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Preference number: 1 (lower is better) Translates to: SMNTRLSTGVYVRMF*PQTGHGQALHRAPI Trigger: GATCGGGGCTCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACACACCTGTAGACAATCTTGTGTTCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | CTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTCATCCCCACTaGTTCTCCAGGCCCAAATCATCATCACAGGGCTTACCCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: LRLSATFISLNCHPH*FSRPKSSSQGLPWT Trigger: AGTCCAGGGTAAGCCCTGTGATGATGATTTGGGCCTGGAGAAGCAGTGGGGATGACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR GCA 90 bp | TTTTCTGTAGAGAACATGCATGTGCCTCAGAGTGAGATGGGAATCTaGTCCTACCACGTGAAGTATGATCTGGAGCCGGCAGCCTTACCT | + |
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Preference number: 1 (lower is better) Translates to: FSVENMHVPQSEMGI*SYHVKYDLEPAALP Trigger: AGGTAAGGCTGCCGGCTCCAGATCATACTTCACGTGGTAGGAGCAGATTCCCATCTCACTCTGAGGCACATGCATGTTCTCTACAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR CCA 90 bp | GTGGTGACAGAGATGGGAAGTGAATCCAAAACTTTGCTCTATTTATaGAGAGCCCGAATCTTAGAACTAAGGTTGCGGCGCTGTGCGCAT | + |
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Preference number: 1 (lower is better) Translates to: VVTEMGSESKTLLYL*RARILELRLRRCAH Trigger: ATGCGCACAGCGCCGCAACCTTAGTTCTAAGATTCGGGCTCTCCATAAATAGAGCAAAGTTTTGGATTCACTTCCCATCTCTGTCACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCGCCGGAAGTGCTCACAGACACATCCTACACGCGAGCAGTGGACTGGTCCACAGTCTCTGGGCTaGGATGTCCTGCTGGCCCGC | + |
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Preference number: 2 (lower is better) Translates to: SWRRKCSQTHPTREQWTGPQSLG*DVLLAR Trigger: GCGGGCCAGCAGGACATCCCAGCCCAGAGACTGTGG...ACCAGTCCACTGCTCGCGTGTAGGATGTGTCTGTGAGCACTTCCGGCGCCAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGCGCCGGAAGTGCTCACAGACACATCCTACACGCGAGCAGTGGACTGGTGTGCTCCCGGAGGGGTaGGGCCATTTGGTAGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SWRRKCSQTHPTREQWTGVLPEG*GHLVVL Trigger: CAGCACTACCAAATGGCCTCACCCCTCCGGGAGCAC...ACCAGTCCACTGCTCGCGTGTAGGATGTGTCTGTGAGCACTTCCGGCGCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTACCCTGGGTCACCCCATACTaGCTTGGGGTAGGGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: RRVRGCNPGMRGIGGGLPWVTPY*LGVGLD Trigger: ATCCAGCCCTACCCCAAGTCAGTATGGGGTGACCCA...GGGTAGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | GATGTCCTGCTGGCCCGCCGCTTGCCTCCACCCTTCGTGCCTACACTTTCAGGGGAGCCCAGCCCAGAATaGTTTGACTTAGCTTCTGGG | + |
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Preference number: 2 (lower is better) Translates to: DVLLARRLPPPFVPTLSGEPSPE*FDLASG Trigger: CCCAGAAGCTAAGTCAAACCATTCTGGGCTGGGCTC...CCCTGAAAGTGTAGGCACGAAGGGTGGAGGCAAGCGGCGGGCCAGCAGGACATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGCGCCGGAAGTGCTCACAGACACATCCTACACGCGAGCAGTGGACTGGTTCTTGGGGGCAGGACTaGTGGGGCACATTTGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SWRRKCSQTHPTREQWTGSWGQD*WGTFER Trigger: CCTTTCAAATGTGCCCCATCAGTCCTGCCCCCAAGA...ACCAGTCCACTGCTCGCGTGTAGGATGTGTCTGTGAGCACTTCCGGCGCCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | TACCTAGGTGGTCAGGTGACATTTTCTTCTCTATGGGCTTTGCTGCCAGTCACCGGGAGGCCCCCACACTaGGTCCTCCCCGGGATGCAC | + |
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Preference number: 2 (lower is better) Translates to: YLGGQVTFSSLWALLPVTGRPPH*VLPGMH Trigger: GTGCATCCCGGGGAGGACTCAGTGTGGGGGCCTCCC...GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGTCACCTGACCACCTAGGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGCGCCGGAAGTGCTCACAGACACATCCTACACGCGAGCAGTGGACTGGTTGTTGGTTGGAGAGGTaGGGCCCAGGCTGCCTTTTT | + |
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Preference number: 2 (lower is better) Translates to: SWRRKCSQTHPTREQWTGCWLER*GPGCLF Trigger: AAAAAGGCAGCCTGGGCCTCACCTCTCCAACCAACA...ACCAGTCCACTGCTCGCGTGTAGGATGTGTCTGTGAGCACTTCCGGCGCCAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR GCA 90 bp | TGCAAGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTGGGGACTGGGCGTGCTaGTCTATGAGATGTTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: CKEGEGLQSWDERNRGWAGDWAC*SMRCWL Trigger: CAACCAACATCTCATAGAGCAGCACGCCCAGTCCCC...AGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCTTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR GCA 90 bp | TACCTAGGTGGTCAGGTGACATTTTCTTCTCTATGGGCTTTGCTGCCAGTCACCACGGCCCCTCACAGCTaGGGAGCAGGCAGCCTTCCG | + |
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Preference number: 2 (lower is better) Translates to: YLGGQVTFSSLWALLPVTTAPHS*GAGSLP Trigger: CGGAAGGCTGCCTGCTCCGCAGCTGTGAGGGGCCGT...GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGTCACCTGACCACCTAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR GCA 90 bp | TACCTAGGTGGTCAGGTGACATTTTCTTCTCTATGGGCTTTGCTGCCAGTCACCGCAGCGGTGCAAGAGTaGTCCCGGAGGGGTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: YLGGQVTFSSLWALLPVTAAVQE*SRRGEA Trigger: GGCCTCACCCCTCCGGGAGCACTCTTGCACCGCTGC...GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGTCACCTGACCACCTAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | AGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTACCCCTGATGGGGCACATTTaGAAGGTCAAGATGGGAACA | + |
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Preference number: 2 (lower is better) Translates to: RRVRGCNPGMRGIGGGLPLMGHI*KVKMGT Trigger: TGTTCCCATCTTGACCTTTCAAATGTGCCCCATCAG...GGGTAGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | TACAGGTGTGTACGTGAGAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTCGAGCAGTGGACTGGTaGGGACTGGGCGTGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: YRCVRENVLPTDWTWSSSRAVDW*GLGVLL Trigger: GAGCAGCACGCCCAGTCCCCACCAGTCCACTGCTCG...AGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACACACCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGATGTGTGAGAAGCGGATTTTGGCGGCCGTGACCAGGGCAGGACATCCCAGTCTATTGGGGTGGTaGCAGAGATGGGAAGTGAAT | + |
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Preference number: 2 (lower is better) Translates to: SLMCEKRILAAVTRAGHPSLLGW*QRWEVN Trigger: ATTCACTTCCCATCTCTGTCACCACCCCAATAGACT...GGGATGTCCTGCCCTGGTCACGGCCGCCAAAATCCGCTTCTCACACATCAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR GCA 90 bp | TACCTAGGTGGTCAGGTGACATTTTCTTCTCTATGGGCTTTGCTGCCAGTCACCCAAACCCGCATCCTCTaGCCCCCAGTCTCCGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: YLGGQVTFSSLWALLPVTQTRIL*PPVSVP Trigger: GGGAACGGAGACTGGGGGGCAGAGGATGCGGGTTTG...GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGTCACCTGACCACCTAGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR CAA 90 bp | AGTCTCCGTTCCCTGGGGATGATGAGGAGGAGGTATTTGACAGCATaGTCAACGACGAAGTTCGCTATCCCCGCTTCCTGTCTGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SLRSLGMMRRRYLTA*STTKFAIPASCLQR Trigger: CCTCTGCAGACAGGAAGCGGGGATAGCGAACTTCGTCGTTGACAATGCTGTCAAATACCTCCTCCTCATCATCCCCAGGGAACGGAGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGATGTGTGAGAAGCGGATTTTGGCGGCCGTGACCAGGGCAGGACATCCCGTGGGTAGAAGGTGTTaGGATTCTTGGGATAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: SLMCEKRILAAVTRAGHPVGRRC*DSWDSL Trigger: CAAACTATCCCAAGAATCTCAACACCTTCTACCCAC...GGGATGTCCTGCCCTGGTCACGGCCGCCAAAATCCGCTTCTCACACATCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGACCTCTGCAAGGAGGGTaGGGGGCTGCAATCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGPLQGG*GAAILG Trigger: TCCCAGGATTGCAGCCCCTCACCCTCCTTGCAGAGG...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGACATCCCACCCAGGGATaGGCTATGGGGACCGGACCA | + |
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Preference number: 2 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGHPTQG*AMGTGP Trigger: TGGTCCGGTCCCCATAGCCCATCCCTGGGTGGGATG...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR CAA 90 bp | CGGCCTGTGTGGTGCTGGGACTGCAGTTCCTCCATGAACACAAGATaGTCTACAGGTGTGTACGTGAGAATGTTCTGCCCACAGACTGGA | + |
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Preference number: 2 (lower is better) Translates to: RPVWCWDCSSSMNTR*STGVYVRMFCPQTG Trigger: TCCAGTCTGTGGGCAGAACATTCTCACGTACACACCTGTAGACAATCTTGTGTTCATGGAGGAACTGCAGTCCCAGCACCACACAGGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGATGTGTGAGAAGCGGATTTTGGCGGCCGTGACCAGGGCAGGACATCCCGACAGAGATGGGAAGTaGATCCAAAACTTTGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: SLMCEKRILAAVTRAGHPDRDGK*IQNFAL Trigger: TAGAGCAAAGTTTTGGATTCACTTCCCATCTCTGTC...GGGATGTCCTGCCCTGGTCACGGCCGCCAAAATCCGCTTCTCACACATCAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | GTGTACGTGAGAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTGCACAGAGGGCGTGCTGCTCTATaGGATGTTGGTTGGAGAGGT | + |
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Preference number: 2 (lower is better) Translates to: VYVRMFCPQTGHGQALHRGRAAL*DVGWRG Trigger: ACCTCTCCAACCAACATCTCATAGAGCAGCACGCCC...TCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR GCA 90 bp | TACAGGTGTGTACGTGAGAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTAGGAGGGTGAGGGGCTaGAATCCTGGGATGAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: YRCVRENVLPTDWTWSSSRRVRG*NPGMRG Trigger: TCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCT...AGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACACACCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCCCAAATCTAGTAGCTGTATCTTAAAGAGCTTTGTAGCCCCACACCTCTTCAAGCTGTTGGCCTaGGGAGTCCCACCTCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: SHPKSSSCILKSFVAPHLFKLLA*GVPPLV Trigger: CACCAGAGGTGGGACTCCCCAGGCCAACAGCTTGAA...GAGGTGTGGGGCTACAAAGCTCTTTAAGATACAGCTACTAGATTTGGGGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | TGCCTCCACCCTTCGTGCCTACACTTTCAGGGCGCACAGATGTCAGCAACTTCGTTTGAAAGGTCAAGATaGGAACATGCAGTAGTGGGC | + |
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Preference number: 2 (lower is better) Translates to: CLHPSCLHFQGAQMSATSFERSR*EHAVVG Trigger: GCCCACTACTGCATGTTCCCATCTTGACCTTTCAAA...CGAAGTTGCTGACATCTGTGCGCCCTGAAAGTGTAGGCACGAAGGGTGGAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | GTGTACGTGAGAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTGCACAGATGCCTCAGAGTGAGATaGGAATCTGCTCCTACCACG | + |
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Preference number: 2 (lower is better) Translates to: VYVRMFCPQTGHGQALHRCLRVR*ESAPTT Trigger: CGTGGTAGGAGCAGATTCCCATCTCACTCTGAGGCA...TCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGAGCCTCCTGTCCAGCCTaGTGTGTGAGAAGCGGATTT | + |
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Preference number: 2 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGASCPA*CVRSGF Trigger: AAATCCGCTTCTCACACATCAGGCTGGACAGGAGGC...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | TCCCACCCCAAATCTAGTAGCTGTATCTTAAAGAGCTTTGTAGCCCCACACCTCTGTACTCGTCCCCAGTaGAGCCTCTTTCACCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SHPKSSSCILKSFVAPHLCTRPQ*SLFHPC Trigger: ACAGGGGTGAAAGAGGCTCCACTGGGGACGAGTACA...GAGGTGTGGGGCTACAAAGCTCTTTAAGATACAGCTACTAGATTTGGGGTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGAGCCTCTGTGTGCATCTaGACTGGAGTGTGCTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGASVCI*TGVCLE Trigger: CTCCAAGCACACTCCAGTCCAGATGCACACAGAGGC...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | TCCCACCCCAAATCTAGTAGCTGTATCTTAAAGAGCTTTGTAGCCCCACACCTCGAGACTCTATACCCTTaGGCCCAGCCCAGAATGGTT | + |
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Preference number: 2 (lower is better) Translates to: SHPKSSSCILKSFVAPHLETLYP*AQPRMV Trigger: AACCATTCTGGGCTGGGCTCAAGGGTATAGAGTCTC...GAGGTGTGGGGCTACAAAGCTCTTTAAGATACAGCTACTAGATTTGGGGTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR TCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGACTCCCTAGATTTATCTaGGTTCCCAGTCCCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGLPRFI*VPSPSP Trigger: TGGGGAGGGACTGGGAACTCAGATAAATCTAGGGAG...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR GCA 90 bp | TACCTAGGTGGTCAGGTGACATTTTCTTCTCTATGGGCTTTGCTGCCAGTCACCGTCAAGATGGGAACATaGAGTAGTGGGCTTAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: YLGGQVTFSSLWALLPVTVKMGT*SSGLRG Trigger: ACCCCTAAGCCCACTACTGCATGTTCCCATCTTGAC...GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGTCACCTGACCACCTAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGACACCCCATACTGACTTaGGGTAGGGCTGGATGGATA | + |
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Preference number: 2 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGHPILT*GRAGWI Trigger: TATCCATCCAGCCCTACCCCAAGTCAGTATGGGGTG...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR-3UTR CCA 90 bp | TACCTAGGTGGTCAGGTGACATTTTCTTCTCTATGGGCTTTGCTGCCAGTCACCTATGTTGGAGAGCATTaGGGTTTTAAGGCCGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YLGGQVTFSSLWALLPVTYVGEH*GFKAVW Trigger: CCACACGGCCTTAAAACCCCAATGCTCTCCAACATA...GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGTCACCTGACCACCTAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CCA 90 bp | TACCTAGGTGGTCAGGTGACATTTTCTTCTCTATGGGCTTTGCTGCCAGTCACCTGGGGTAGGGCTGGATaGATATTTGGAGCATCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: YLGGQVTFSSLWALLPVTWGRAG*IFGASH Trigger: ATGAGATGCTCCAAATATCCATCCAGCCCTACCCCA...GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGTCACCTGACCACCTAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CAA 90 bp | TGGGTAGAAGGTGTTGAGATTCTTGGGATAGTTTGGGATAGACGCTaGCAAGAGTCTATTGGGGTGGTGACAGAGATGGGAAGTGAATCC | + |
|
Preference number: 2 (lower is better) Translates to: WVEGVEILGIVWDRR*QESIGVVTEMGSES Trigger: GGATTCACTTCCCATCTCTGTCACCACCCCAATAGACTCTTGCAAGCGTCTATCCCAAACTATCCCAAGAATCTCAACACCTTCTACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR GCA 90 bp | TCCCACCCCAAATCTAGTAGCTGTATCTTAAAGAGCTTTGTAGCCCCACACCTCCCTCCCCATCTTATCTaGTTCCTGCTGATCTCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SHPKSSSCILKSFVAPHLPPHLI*FLLISR Trigger: TCTAGAGATCAGCAGGAAGCAGATAAGATGGGGAGG...GAGGTGTGGGGCTACAAAGCTCTTTAAGATACAGCTACTAGATTTGGGGTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CAA 90 bp | CCACACCTCACAGCCACCATGATTCTTCACAAATGTTACCTCCGTTaGTCTGCAACCTTCATTTCCCTTAATTGTCATCCCCACTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PHLTATMILHKCYLR*SATFISLNCHPHCF Trigger: GAAGCAGTGGGGATGACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAATCATGGTGGCTGTGAGGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGAACATTTTCTTCTCTATaGGCTTTGCTGCCAGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGTFSSL*ALLPVT Trigger: GGTGACTGGCAGCAAAGCCCATAGAGAAGAAAATGT...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTTCACAAATGTTACCTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTTTCACCCCTGTGCGGTaGCAGTGTTGTGGACCCACA | + |
|
Preference number: 2 (lower is better) Translates to: ILHKCYLRLSATFISLNCFTPVR*QCCGPT Trigger: TGTGGGTCCACAACACTGTCACCGCACAGGGGTGAA...ACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTTCACAAATGTTACCTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTTGTCAGCAACTTCGATaGGGAGTTCACTGGGGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: ILHKCYLRLSATFISLNCCQQLR*GVHWGG Trigger: GCCTCCCCAGTGAACTCCTCATCGAAGTTGCTGACA...ACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTTCACAAATGTTACCTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTGTGAATCCAAAACTTTaGTCTATTTATGGAGAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ILHKCYLRLSATFISLNCVNPKL*SIYGEP Trigger: GGGCTCTCCATAAATAGAGCAAAGTTTTGGATTCAC...ACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | AGTCTCTGGGCTGGGATGTCCTGCTGGCCCGCCGCTTaGCTCCACCCTTCGTGCCTACACTTTCAGGGCGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLWAGMSCWPAA*LHPSCLHFQGA Trigger: TGCGCCCTGAAAGTGTAGGCACGAAGGGTGGAGGCAAGCGGCGGGCCAGCAGGACATCCCAGCCCAGAGACT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | CTCGTCCCCAGTGGAGCCTCTTTCACCCCTGTGCGGTaGCAGTGTTGTGGACCCACAGGACGCAGCGCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: LVPSGASFTPVR*QCCGPTGRSAL Trigger: TAGGGCGCTGCGTCCTGTGGGTCCACAACACTGTCACCGCACAGGGGTGAAAGAGGCTCCACTGGGGACGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | CTGCTTGTCTGCGGGCTGGGCTTGCCGTCCTCTCACTaGCAGGGAGGGAAGCCTCTCACCACTGATCAGACC | + |
|
Preference number: 3 (lower is better) Translates to: LLVCGLGLPSSH*QGGKPLTTDQT Trigger: GGTCTGATCAGTGGTGAGAGGCTTCCCTCCCTGTCAGTGAGAGGACGGCAAGCCCAGCCCGCAGACAAGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | TGGAGCCTCTTTCACCCCTGTGCGGTGACAGTGTTGTaGACCCACAGGACGCAGCGCCCTAGGCACACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: WSLFHPCAVTVL*THRTQRPRHTE Trigger: CTCAGTGTGCCTAGGGCGCTGCGTCCTGTGGGTCCACAACACTGTCACCGCACAGGGGTGAAAGAGGCTCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | ATGTCCTGCTGGCCCGCCGCTTGCCTCCACCCTTCGTaGCTACACTTTCAGGGCGCACAGATGTCAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: MSCWPAACLHPS*LHFQGAQMSAT Trigger: AGTTGCTGACATCTGTGCGCCCTGAAAGTGTAGGCACGAAGGGTGGAGGCAAGCGGCGGGCCAGCAGGACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | CAGGGAGGGAAGCCTCTCACCACTGATCAGACCCCATaGTTCAGTCGTTACACCGAGCCTGATGAGCGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: QGGKPLTTDQTP*FSRYTEPDERA Trigger: GGCCCGCTCATCAGGCTCGGTGTAACGACTGAAGCATGGGGTCTGATCAGTGGTGAGAGGCTTCCCTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCTGGCGCCGGAAGTGCTCACAGACACATCCTACACGCGAGCAGTGGACTGGTATGCTCTTCAAGCTGTaGGCCTGGGGAGTCCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: SWRRKCSQTHPTREQWTGMLFKL*AWGVPP Trigger: AGGTGGGACTCCCCAGGCCAACAGCTTGAAGAGCAT...ACCAGTCCACTGCTCGCGTGTAGGATGTGTCTGTGAGCACTTCCGGCGCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGCTACTGCGGAGGAACCCGGAGCGGAGGCTGGGGTCCACTGAGCGCGATACTGATGGGGCACATTaGAAAGGTCAAGATGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SQLLRRNPERRLGSTERDTDGAH*KGQDGN Trigger: GTTCCCATCTTGACCTTTCAAATGTGCCCCATCAGT...ATCGCGCTCAGTGGACCCCAGCCTCCGCTCCGGGTTCCTCCGCAGTAGCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | CTAGCAACTATAGGCTCACGTGGCCTTGCTCTCCATCCCACCCAGGGATGGGCTCTGCTCTATGAGATGTaGGTTGGAGAGGTGAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: LATIGSRGLALHPTQGWALLYEM*VGEVRP Trigger: GGGCCTCACCTCTCCAACCAACATCTCATAGAGCAG...AGCCCATCCCTGGGTGGGATGGAGAGCAAGGCCACGTGAGCCTATAGTTGCTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCAAGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTTCTTCTCTATGGGCTTaGCTGCCAGTCACCTGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CKEGEGLQSWDERNRGWASSLWA*LPVTCS Trigger: TGAGCAGGTGACTGGCAGCAAAGCCCATAGAGAAGA...AGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCTTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | AGATATAGATCAACTCCTGTGCATGCTCACAGCTACTaGGGAGGAACCCGGAGCGGAGGCTGGGGTCCACTG | + |
|
Preference number: 3 (lower is better) Translates to: RYRSTPVHAHSY*GGTRSGGWGPL Trigger: CAGTGGACCCCAGCCTCCGCTCCGGGTTCCTCCGCAGTAGCTGTGAGCATGCACAGGAGTTGATCTATATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | GAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTaGACAGAGCCCCGATCCCTACCCAGTCACCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ECSAHRLDMVKL*TEPRSLPSHPS Trigger: AGAGGGGTGACTGGGTAGGGATCGGGGCTCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | TACACTTTCAGGGCGCACAGATGTCAGCAACTTCGATaGGGAGTTCACTGGGGAGGCCCCCACACTGAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: YTFRAHRCQQLR*GVHWGGPHTES Trigger: GGACTCAGTGTGGGGGCCTCCCCAGTGAACTCCTCATCGAAGTTGCTGACATCTGTGCGCCCTGAAAGTGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | GGGTCAGGGACTTTGGTGCCTGAGGAACCAGGCTTGTaGGATCTTATGCATCTCCGCAGCTTCTATTCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GSGTLVPEEPGL*DLMHLRSFYSA Trigger: GGCCGAATAGAAGCTGCGGAGATGCATAAGATCGCACAAGCCTGGTTCCTCAGGCACCAAAGTCCCTGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | TGTGTACGTGAGAATGTTCTGCCCACAGACTGGACATaGTCAAGCTCTGCACAGAGCCCCGATCCCTACCCA | + |
|
Preference number: 3 (lower is better) Translates to: CVRENVLPTDWT*SSSAQSPDPYP Trigger: TGGGTAGGGATCGGGGCTCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | TACAGGTGTGTACGTGAGAATGTTCTGCCCACAGACTaGACATGGTCAAGCTCTGCACAGAGCCCCGATCCC | + |
|
Preference number: 3 (lower is better) Translates to: YRCVRENVLPTD*TWSSSAQSPDP Trigger: GGGATCGGGGCTCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACACACCTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCAAGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTTGCTGGGTGTGTGGATaGGCTAAAAGTGGGATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: CKEGEGLQSWDERNRGWACWVCG*AKSGIL Trigger: TAAAATCCCACTTTTAGCCAATCCACACACCCAGCA...AGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCTTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | GGTGACAGAGGCAAGGCAGACTCTTGGGGGCAGGACTaGTGGGGCACATTTGAAAGGTCAAGATGGGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: GDRGKADSWGQD*WGTFERSRWEH Trigger: ATGTTCCCATCTTGACCTTTCAAATGTGCCCCATCAGTCCTGCCCCCAAGAGTCTGCCTTGCCTCTGTCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | AAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTaGACCTGGAGGGCATGGGTATTGGAGGGGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLHSGATQQIPE*TWRAWVLEGQL Trigger: CAGCTGCCCCTCCAATACCCATGCCCTCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | CTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTaGGTGAACCTGGAGGGCATGGGTATTGGAGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LKIAQRCNSTDT*VNLEGMGIGGA Trigger: TGCCCCTCCAATACCCATGCCCTCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | GAGAACATGCATGTGCCTCAGAGTGAGATGGGAATCTaGTCCTACCACGTGAAGTATGATCTGGAGCCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ENMHVPQSEMGI*SYHVKYDLEPA Trigger: TGCCGGCTCCAGATCATACTTCACGTGGTAGGAGCAGATTCCCATCTCACTCTGAGGCACATGCATGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | CATACATGCATTTTCAGCCTCTGTGTGCATCTGGACTaGAGTGTGCTTGGAGCAGGTGACAGAGGCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: HTCIFSLCVHLD*SVLGAGDRGKA Trigger: TGCCTTGCCTCTGTCACCTGCTCCAAGCACACTCCAGTCCAGATGCACACAGAGGCTGAAAATGCATGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTGCTCTATTTATGGAGAGCCCGAATCTTAGAACTAAGGTTGCGGCGCTGTTGTGCGGTGACAGTGTaGTGGACCCACAGGACGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TLLYLWRARILELRLRRCCAVTV*WTHRTQ Trigger: CTGCGTCCTGTGGGTCCACAACACTGTCACCGCACA...ACAGCGCCGCAACCTTAGTTCTAAGATTCGGGCTCTCCATAAATAGAGCAAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCCACCCCAAATCTAGTAGCTGTATCTTAAAGAGCTTTGTAGCCCCACACCTCTGGACTGGAGTGTGCTaGGAGCAGGTGACAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: SHPKSSSCILKSFVAPHLWTGVC*EQVTEA Trigger: TGCCTCTGTCACCTGCTCCAAGCACACTCCAGTCCA...GAGGTGTGGGGCTACAAAGCTCTTTAAGATACAGCTACTAGATTTGGGGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | AGTTCCCAGTCCCTCCCCATCTTATCTGCTTCCTGCTaGTCTCTAGACTTCCCTTCAGACCCTCAAAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: SSQSLPILSASC*SLDFPSDPQSP Trigger: TGGACTTTGAGGGTCTGAAGGGAAGTCTAGAGATCAGCAGGAAGCAGATAAGATGGGGAGGGACTGGGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | GGGGTTTACTCCATACATGCATTTTCAGCCTCTGTGTaGATCTGGACTGGAGTGTGCTTGGAGCAGGTGACA | + |
|
Preference number: 3 (lower is better) Translates to: GVYSIHAFSASV*IWTGVCLEQVT Trigger: TGTCACCTGCTCCAAGCACACTCCAGTCCAGATGCACACAGAGGCTGAAAATGCATGTATGGAGTAAACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | TACTCCATACATGCATTTTCAGCCTCTGTGTGCATCTaGACTGGAGTGTGCTTGGAGCAGGTGACAGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: YSIHAFSASVCI*TGVCLEQVTEA Trigger: TGCCTCTGTCACCTGCTCCAAGCACACTCCAGTCCAGATGCACACAGAGGCTGAAAATGCATGTATGGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | ATCTTATGCATCTCCGCAGCTTCTATTCGGCCTGTGTaGTGCTGGGACTGCAGTTCCTCCATGAACACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ILCISAASIRPV*CWDCSSSMNTR Trigger: TCTTGTGTTCATGGAGGAACTGCAGTCCCAGCACCACACAGGCCGAATAGAAGCTGCGGAGATGCATAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | ACAAGATTGTCTACAGGTGTGTACGTGAGAATGTTCTaGCCACAGACTGGACATGGTCAAGCTCTGCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TRLSTGVYVRMF*PQTGHGQALHR Trigger: TCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACACACCTGTAGACAATCTTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | GTGTGGGTAGAAGGTGTTGAGATTCTTGGGATAGTTTaGGATAGACGCTTGCAAGAGTCTATTGGGGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: VWVEGVEILGIV*DRRLQESIGVV Trigger: CACCACCCCAATAGACTCTTGCAAGCGTCTATCCCAAACTATCCCAAGAATCTCAACACCTTCTACCCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | GGGTATGTTGGAGAGCATTGGGGTTTTAAGGCCGTGTaGGTAGAAGGTGTTGAGATTCTTGGGATAGTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: GYVGEHWGFKAV*VEGVEILGIVW Trigger: CCAAACTATCCCAAGAATCTCAACACCTTCTACCCACACGGCCTTAAAACCCCAATGCTCTCCAACATACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR-3UTR CAA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGAATGAGGAGGAGGTATTaGACAGCATTGTCAACGACG | + |
|
Preference number: 3 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGMRRRY*TALSTT Trigger: CGTCGTTGACAATGCTGTCAAATACCTCCTCCTCAT...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | GCAAGAGTCTATTGGGGTGGTGACAGAGATGGGAAGTaGATCCAAAACTTTGCTCTATTTATGGAGAGCCCG | + |
|
Preference number: 3 (lower is better) Translates to: ARVYWGGDRDGK*IQNFALFMESP Trigger: CGGGCTCTCCATAAATAGAGCAAAGTTTTGGATTCACTTCCCATCTCTGTCACCACCCCAATAGACTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR GCA 72 bp | TCTGCAACCTTCATTTCCCTTAATTGTCATCCCCACTaGTTCTCCAGGCCCAAATCATCATCACAGGGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: SATFISLNCHPH*FSRPKSSSQGL Trigger: TAAGCCCTGTGATGATGATTTGGGCCTGGAGAAGCAGTGGGGATGACAATTAAGGGAAATGAAGGTTGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR TCA 72 bp | TTTGGGATAGACGCTTGCAAGAGTCTATTGGGGTGGTaGCAGAGATGGGAAGTGAATCCAAAACTTTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: FGIDACKSLLGW*QRWEVNPKLCS Trigger: AGAGCAAAGTTTTGGATTCACTTCCCATCTCTGTCACCACCCCAATAGACTCTTGCAAGCGTCTATCCCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| 3UTR CCA 72 bp | GAGATGGGAAGTGAATCCAAAACTTTGCTCTATTTATaGAGAGCCCGAATCTTAGAACTAAGGTTGCGGCGC | + |
|
Preference number: 3 (lower is better) Translates to: EMGSESKTLLYL*RARILELRLRR Trigger: GCGCCGCAACCTTAGTTCTAAGATTCGGGCTCTCCATAAATAGAGCAAAGTTTTGGATTCACTTCCCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| CDS-3UTR GCA 90 bp | AGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTACCCCCGCCGCATTCGGCCTaGAACCTGGGCCAGCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGCNPGMRGIGGGLPPPHSA*NLGQQR Trigger: GCGCTGCTGGCCCAGGTTGCAGGCCGAATGCGGCGG...GGGTAGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| CDS-3UTR GCA 90 bp | TCCTGGCGCCGGAAGTGCTCACAGACACATCCTACACGCGAGCAGTGGACTGGTCGCCGCCCCGAGAGCTaGGGAGGGTGGCTGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWRRKCSQTHPTREQWTGRRPES*GGWLWL Trigger: CAGCCACAGCCACCCTCCGCAGCTCTCGGGGCGGCG...ACCAGTCCACTGCTCGCGTGTAGGATGTGTCTGTGAGCACTTCCGGCGCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| CDS-3UTR CCA 90 bp | GATGTCCTGCTGGCCCGCCGCTTGCCTCCACCCTTCGTGCCTACACTTTCAGGGTGGCGCAGCATGGCCTaGCGCAGCAGGATGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: DVLLARRLPPPFVPTLSGWRSMA*RSRMYT Trigger: GGTGTACATCCTGCTGCGCCAGGCCATGCTGCGCCA...CCCTGAAAGTGTAGGCACGAAGGGTGGAGGCAAGCGGCGGGCCAGCAGGACATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| CDS-3UTR TCA 90 bp | AGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTACCCTGCACGACACCACCATaGTGCCCACGAGCTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGCNPGMRGIGGGLPCTTPP*CPRAGP Trigger: TGGGCCAGCTCGTGGGCATCATGGTGGTGTCGTGCA...GGGTAGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTACCCCATGGGTCCAGGATCTaGTTCCACGATGCGAGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RRVRGCNPGMRGIGGGLPHGSRI*FHDARR Trigger: ACGCCTCGCATCGTGGAACCAGATCCTGGACCCATG...GGGTAGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR TCA 90 bp | CTAGCAACTATAGGCTCACGTGGCCTTGCTCTCCATCCCACCCAGGGATGGGCTGGAGCGCCAGGCCGCTaGGCGTATTGCACACTAATG | + |
|
Preference number: 4 (lower is better) Translates to: LATIGSRGLALHPTQGWAGAPGR*AYCTLM Trigger: CATTAGTGTGCAATACGCTCAGCGGCCTGGCGCTCC...AGCCCATCCCTGGGTGGGATGGAGAGCAAGGCCACGTGAGCCTATAGTTGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | TGCAAGGAGGGTGAGGGGCTGCAATCCTGGGATGAGAGGAATAGGGGGTGGGCTAGTTCCAGCCCCCGATaGCCAACACCACCAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: CKEGEGLQSWDERNRGWASSSPR*PTPPTP Trigger: TGGTGTTGGTGGTGTTGGCCATCGGGGGCTGGAACT...AGCCCACCCCCTATTCCTCTCATCCCAGGATTGCAGCCCCTCACCCTCCTTGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | TCTCAGTCACCCCAAGGACCTGAGTATTCTTCTCAGTTCCAGTTCATTCCCACCATTCGGCCTGCAACCTaGGCCAGCAGCGCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQSPQGPEYSSQFQFIPTIRPAT*ASSASA Trigger: GGCGCTGGCGCTGCTGGCCCAGGTTGCAGGCCGAAT...GGTGGGAATGAACTGGAACTGAGAAGAATACTCAGGTCCTTGGGGTGACTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | ACTGCTTCTCCAGGCCCAAATCATCATCACAGGGCTTACCCTGGACTACCTCAGGCGCCCGGGATCACATaGCCTGCTAGGTCGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TASPGPNHHHRAYPGLPQAPGIT*PARSMA Trigger: TGCCATCGACCTAGCAGGCCATGTGATCCCGGGCGC...CTGAGGTAGTCCAGGGTAAGCCCTGTGATGATGATTTGGGCCTGGAGAAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | AGCCTGATGTGTGAGAAGCGGATTTTGGCGGCCGTGACCAGGGCAGGACATCCCTACAGCCAGAAAGAGTaGCCGCTGCAGGGAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLMCEKRILAAVTRAGHPYSQKE*PLQGVR Trigger: TCTAACTCCCTGCAGCGGCCACTCTTTCTGGCTGTA...GGGATGTCCTGCCCTGGTCACGGCCGCCAAAATCCGCTTCTCACACATCAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | GTGTACGTGAGAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTGCACAGAAGGAGGCGAAGCAGTTaGCGCAGCATGGCCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VYVRMFCPQTGHGQALHRRRRSS*RSMAWR Trigger: GCGCCAGGCCATGCTGCGCCAACTGCTTCGCCTCCT...TCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | GTGTACGTGAGAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTGCACAGAGGCCTGCTAGGTCGATaGCAAGCAGGCTGGCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: VYVRMFCPQTGHGQALHRGLLGR*QAGWRR Trigger: TCGTCGCCAGCCTGCTTGCCATCGACCTAGCAGGCC...TCTGTGCAGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | CTAGCAACTATAGGCTCACGTGGCCTTGCTCTCCATCCCACCCAGGGATGGGCTACAGCCAAGCAAAAGTaGGCACAGGCCGAAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LATIGSRGLALHPTQGWATAKQK*AQAEED Trigger: GTCTTCTTCGGCCTGTGCCCACTTTTGCTTGGCTGT...AGCCCATCCCTGGGTGGGATGGAGAGCAAGGCCACGTGAGCCTATAGTTGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR GCA 90 bp | TACAGGTGTGTACGTGAGAATGTTCTGCCCACAGACTGGACATGGTCAAGCTCTTGGCAGCAGCGCCACTaGCAAAGCCATGGCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRCVRENVLPTDWTWSSSWQQRH*QSHGSQ Trigger: CTGGCTGCCATGGCTTTGGCAGTGGCGCTGCTGCCA...AGAGCTTGACCATGTCCAGTCTGTGGGCAGAACATTCTCACGTACACACCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR GCA 90 bp | GTGTGGGTAGAAGGTGTTGAGATTCTTGGGATAGTTTGGGATAGACGCTTGCAAGCGTGGATCAGTGGCTaGGTGACACCCACACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VWVEGVEILGIVWDRRLQAWISG*VTPTQR Trigger: GCGCTGTGTGGGTGTCACGCAGCCACTGATCCACGC...TTGCAAGCGTCTATCCCAAACTATCCCAAGAATCTCAACACCTTCTACCCACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR TCA 90 bp | ATCGCTCAAAATTGCACAGCGGTGCAACTCAACAGATACCTGAGTGAACCTGGATGGCTGTGGCTGAAGTaGTGGATGAGGCAGACGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IAQNCTAVQLNRYLSEPGWLWLK*WMRQTR Trigger: CCTCGTCTGCCTCATCCATCACTTCAGCCACAGCCA...TCCAGGTTCACTCAGGTATCTGTTGAGTTGCACCGCTGTGCAATTTTGAGCGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR CAA 72 bp | CTCTATTTATGGAGAGCCCGAATCTTAGAACTAAGGTaGCGGCGCTGTGCGCATGCTCTTCAAGCTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LYLWRARILELR*RRCAHALQAVG Trigger: GCCAACAGCTTGAAGAGCATGCGCACAGCGCCGCAACCTTAGTTCTAAGATTCGGGCTCTCCATAAATAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR CAA 72 bp | GGTGTTGAGATTCTTGGGATAGTTTGGGATAGACGCTaGCAAGAGTCTATTGGGGTGGTGACAGAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVEILGIVWDRR*QESIGVVTEMG Trigger: TCCCATCTCTGTCACCACCCCAATAGACTCTTGCAAGCGTCTATCCCAAACTATCCCAAGAATCTCAACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | ATTCTTCACAAATGTTACCTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTGCAGTTGGCGCAGCATaGCCTGGCGCAGCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKCYLRLSATFISLNCAVGAA*PGAAGC Trigger: ACATCCTGCTGCGCCAGGCCATGCTGCGCCAACTGC...ACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR TCA 90 bp | ATTCTTCACAAATGTTACCTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTCCGGGAACTACGCAGTaGACTGGCTTCCCAGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: ILHKCYLRLSATFISLNCPGTTQ*TGFPGT Trigger: AGTGCCTGGGAAGCCAGTTCACTGCGTAGTTCCCGG...ACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CCA 90 bp | ATTCTTCACAAATGTTACCTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTACCCACGTGTACCAGTaGCAGCAGCGCCACTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ILHKCYLRLSATFISLNCTHVYQ*QQRHCQ Trigger: TTGGCAGTGGCGCTGCTGCCACTGGTACACGTGGGT...ACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR GCA 90 bp | ATTCTTCACAAATGTTACCTCCGTTTGTCTGCAACCTTCATTTCCCTTAATTGTGGCCGAAGAAGACCATaGAGCCACCCAGGAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: ILHKCYLRLSATFISLNCGRRRP*SHPGND Trigger: GTCATTTCCTGGGTGGCTGCATGGTCTTCTTCGGCC...ACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| 3UTR CAA 72 bp | ACAGCCACCATGATTCTTCACAAATGTTACCTCCGTTaGTCTGCAACCTTCATTTCCCTTAATTGTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TATMILHKCYLR*SATFISLNCHP Trigger: GGGATGACAATTAAGGGAAATGAAGGTTGCAGACAAACGGAGGTAACATTTGTGAAGAATCATGGTGGCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS GCA 90 bp | TGCCCACGAGCTGGCCCACCATTTCCACATCGTGTGCGTGAACCCTaGGCGCGGAGCCGCCGCCCCGAGAGCTGCGGAGGGTGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CPRAGPPFPHRVREP*ARSRRPESCGGWLW Trigger: CCACAGCCACCCTCCGCAGCTCTCGGGGCGGCGGCTCCGCGCGCAGGGTTCACGCACACGATGTGGAAATGGTGGGCCAGCTCGTGGGCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | GGGCGCCCGGGATCACATGGCCTGCTAGGTCGATGGCAAGCAGGCTaGCGACGAACAACAGGAAGGTGGCAGCCGAGCGGCGCCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRPGSHGLLGRWQAG*RRTTGRWQPSGAAA Trigger: TGCGGCGGCGCCGCTCGGCTGCCACCTTCCTGTTGTTCGTCGCCAGCCTGCTTGCCATCGACCTAGCAGGCCATGTGATCCCGGGCGCCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | TGCCAGGCGTGCGCGGGCCACAGATACGCGCGCCGCGTGGATCAGTaGCTGCGTGACACCCACACAGCGCTCTACGGCCATGCCACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CQACAGHRYARRVDQ*LRDTHTALYGHATA Trigger: GGCTGTGGCATGGCCGTAGAGCGCTGTGTGGGTGTCACGCAGCCACTGATCCACGCGGCGCGCGTATCTGTGGCCCGCGCACGCCTGGCA 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 90 bp | GAGAGCGACGCCGTCTCCAGCGGGCACGGAGGAGCGCCAGGCCGCTaGGCGTATTGCACACTAATGCCGCAAGGAGCGCGGCCAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ESDAVSSGHGGAPGR*AYCTLMPQGARPGQ Trigger: TTGGCCTGGCCGCGCTCCTTGCGGCATTAGTGTGCAATACGCTCAGCGGCCTGGCGCTCCTCCGTGCCCGCTGGAGACGGCGTCGCTCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 90 bp | ACCATGATGCCCACGAGCTGGCCCACCATTTCCACATCGTGTGCGTaGACCCTGCGCGCGGAGCCGCCGCCCCGAGAGCTGCGGAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TMMPTSWPTISTSCA*TLRAEPPPRELRRV Trigger: CACCCTCCGCAGCTCTCGGGGCGGCGGCTCCGCGCGCAGGGTTCACGCACACGATGTGGAAATGGTGGGCCAGCTCGTGGGCATCATGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS GCA 90 bp | AGGCGTGCGCGGGCCACAGATACGCGCGCCGCGTGGATCAGTGGCTaGGTGACACCCACACAGCGCTCTACGGCCATGCCACAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RRARATDTRAAWISG*VTPTQRSTAMPQPS Trigger: GCTTGGCTGTGGCATGGCCGTAGAGCGCTGTGTGGGTGTCACGCAGCCACTGATCCACGCGGCGCGCGTATCTGTGGCCCGCGCACGCCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS GCA 90 bp | CAAGCGGGGTCCACGAGATCCCCAGCGCCGGCGATCATCGGGACCTaGGGTCTTTCGGAATCGTCGAGAGCGACGCCGTCTCCAGCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QAGSTRSPAPAIIGT*GLSESSRATPSPAG Trigger: GCCCGCTGGAGACGGCGTCGCTCTCGACGATTCCGAAAGACCGCAGGTCCCGATGATCGCCGGCGCTGGGGATCTCGTGGACCCCGCTTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | CTGCTAGGTCGATGGCAAGCAGGCTGGCGACGAACAACAGGAAGGTaGCAGCCGAGCGGCGCCGCCGCATTCGGCCTGCAACCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGRWQAGWRRTTGR*QPSGAAAFGLQPGP Trigger: TGGCCCAGGTTGCAGGCCGAATGCGGCGGCGCCGCTCGGCTGCCACCTTCCTGTTGTTCGTCGCCAGCCTGCTTGCCATCGACCTAGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | GGCGAAGCACCAGGGCGCCCGGGATCACATGGCCTGCTAGGTCGATaGCAAGCAGGCTGGCGACGAACAACAGGAAGGTGGCAGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GEAPGRPGSHGLLGR*QAGWRRTTGRWQPS Trigger: GCTCGGCTGCCACCTTCCTGTTGTTCGTCGCCAGCCTGCTTGCCATCGACCTAGCAGGCCATGTGATCCCGGGCGCCCTGGTGCTTCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | AGCGACCCACGTGTACCAGTGGCAGCAGCGCCACTGCCAAAGCCATaGCAGCCAGCACGGCTAGTGCCAGGCGTGCGCGGGCCACAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SDPRVPVAAAPLPKP*QPARLVPGVRGPQI Trigger: TATCTGTGGCCCGCGCACGCCTGGCACTAGCCGTGCTGGCTGCCATGGCTTTGGCAGTGGCGCTGCTGCCACTGGTACACGTGGGTCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | AGCGCGGCCAGGCCAAGGCCGGCGAAGAGGCCGGCAAGCAACGCCTaGCGCCAACCTCCACGAGGCCCAAGGCTAATAAAACACCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SAARPRPAKRPASNA*RQPPRGPRLIKHQV Trigger: CACCTGGTGTTTTATTAGCCTTGGGCCTCGTGGAGGTTGGCGCCAGGCGTTGCTTGCCGGCCTCTTCGCCGGCCTTGGCCTGGCCGCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 90 bp | GTGCGCGGGCCACAGATACGCGCGCCGCGTGGATCAGTGGCTGCGTaGCACCCACACAGCGCTCTACGGCCATGCCACAGCCAAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VRGPQIRAPRGSVAA*HPHSALRPCHSQAK Trigger: TTTTGCTTGGCTGTGGCATGGCCGTAGAGCGCTGTGTGGGTGTCACGCAGCCACTGATCCACGCGGCGCGCGTATCTGTGGCCCGCGCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | CGCCCCGCAGTATACAGGCGAAGCACCAGGGCGCCCGGGATCACATaGCCTGCTAGGTCGATGGCAAGCAGGCTGGCGACGAACAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: RPAVYRRSTRAPGIT*PARSMASRLATNNR Trigger: CCTGTTGTTCGTCGCCAGCCTGCTTGCCATCGACCTAGCAGGCCATGTGATCCCGGGCGCCCTGGTGCTTCGCCTGTATACTGCGGGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | GGACCACCCTTGGCACTGACCCTCAGGGGTAGGAGGCGAAGCAGTTaGCGCAGCATGGCCTGGCGCAGCAGGATGTACACCCATGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPPLALTLRGRRRSS*RSMAWRSRMYTHGS Trigger: GGACCCATGGGTGTACATCCTGCTGCGCCAGGCCATGCTGCGCCAACTGCTTCGCCTCCTACCCCTGAGGGTCAGTGCCAAGGGTGGTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 90 bp | AGGCACTCTTGGTTAGGCCCAGCTCCGTTGGACCACCCTTGGCACTaGCCCTCAGGGGTAGGAGGCGAAGCAGTTGGCGCAGCATGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RHSWLGPAPLDHPWH*PSGVGGEAVGAAWP Trigger: AGGCCATGCTGCGCCAACTGCTTCGCCTCCTACCCCTGAGGGTCAGTGCCAAGGGTGGTCCAACGGAGCTGGGCCTAACCAAGAGTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 90 bp | CCACCAACACCAGCAGGGGGCTCCAGCAGATGCACGACACCACCATaGTGCCCACGAGCTGGCCCACCATTTCCACATCGTGTGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPTPAGGSSRCTTPP*CPRAGPPFPHRVRE Trigger: TTCACGCACACGATGTGGAAATGGTGGGCCAGCTCGTGGGCATCATGGTGGTGTCGTGCATCTGCTGGAGCCCCCTGCTGGTGTTGGTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 90 bp | GTCCAGGATCTGGTTCCACGATGCGAGGCGTACAGCCAGAAAGAGTaGCCGCTGCAGGGAGTTAGAGTTCCAGCCCCCGATGGCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: VQDLVPRCEAYSQKE*PLQGVRVPAPDGQH Trigger: GTGTTGGCCATCGGGGGCTGGAACTCTAACTCCCTGCAGCGGCCACTCTTTCTGGCTGTACGCCTCGCATCGTGGAACCAGATCCTGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS GCA 90 bp | ATCTGGTTCCACGATGCGAGGCGTACAGCCAGAAAGAGTGGCCGCTaGAGGGAGTTAGAGTTCCAGCCCCCGATGGCCAACACCACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: IWFHDARRTARKSGR*RELEFQPPMANTTN Trigger: GTTGGTGGTGTTGGCCATCGGGGGCTGGAACTCTAACTCCCTGCAGCGGCCACTCTTTCTGGCTGTACGCCTCGCATCGTGGAACCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CAA 90 bp | TCACAGCTACTGCGGAGGAACCCGGAGCGGAGGCTGGGGTCCACTGAGCGCGATTGCCATTATCGCCTGTaGGCAGCACCACAGATGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SQLLRRNPERRLGSTERDCHYRL*AAPQMY Trigger: ATACATCTGTGGTGCTGCCAACAGGCGATAATGGCA...ATCGCGCTCAGTGGACCCCAGCCTCCGCTCCGGGTTCCTCCGCAGTAGCTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CAA 90 bp | ACTGCTTCTCCAGGCCCAAATCATCATCACAGGGCTTACCCTGGACTACCTCAGGCCAGCGCCAGCACGTaGGACACAGCACCCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: TASPGPNHHHRAYPGLPQASAST*DTAPSV Trigger: GACGCTGGGTGCTGTGTCCAACGTGCTGGCGCTGGC...CTGAGGTAGTCCAGGGTAAGCCCTGTGATGATGATTTGGGCCTGGAGAAGCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CAA 90 bp | CTAGCAACTATAGGCTCACGTGGCCTTGCTCTCCATCCCACCCAGGGATGGGCTGCTTCCCAGGCACTCTaGGTTAGGCCCAGCTCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LATIGSRGLALHPTQGWAASQAL*VRPSSV Trigger: AACGGAGCTGGGCCTAACCAAGAGTGCCTGGGAAGC...AGCCCATCCCTGGGTGGGATGGAGAGCAAGGCCACGTGAGCCTATAGTTGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 90 bp | GTTGGACACAGCACCCAGCGTCATGGAGAAGATAGGCAGCGCTGGTaGTGTGCCATTATCGCCTGTTGGCAGCACCACAGATGTATTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGHSTQRHGEDRQRW*CAIIACWQHHRCIG Trigger: CCCAATACATCTGTGGTGCTGCCAACAGGCGATAATGGCACATCACCAGCGCTGCCTATCTTCTCCATGACGCTGGGTGCTGTGTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CAA 90 bp | GTGTGGGTAGAAGGTGTTGAGATTCTTGGGATAGTTTGGGATAGACGCTTGCAATGGGGAGCCTGGGTGTaGCGCACGTTGCTGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: VWVEGVEILGIVWDRRLQWGAWV*RTLLPH Trigger: ATGAGGCAGCAACGTGCGCAACACCCAGGCTCCCCA...TTGCAAGCGTCTATCCCAAACTATCCCAAGAATCTCAACACCTTCTACCCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS-3UTR CAA 90 bp | ACTTTGCTCTATTTATGGAGAGCCCGAATCTTAGAACTAAGGTTGCGGCGCTGTTCCGTTGGACCACCCTaGGCACTGACCCTCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TLLYLWRARILELRLRRCSVGPP*ALTLRG Trigger: ACCCCTGAGGGTCAGTGCCAAGGGTGGTCCAACGGA...ACAGCGCCGCAACCTTAGTTCTAAGATTCGGGCTCTCCATAAATAGAGCAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | GCAGCCGAGCGGCGCCGCCGCATTCGGCCTGCAACCTaGGCCAGCAGCGCCAGCGCCAGCACGTTGGACACA | + |
|
Preference number: 6 (lower is better) Translates to: AAERRRRIRPAT*ASSASASTLDT Trigger: TGTGTCCAACGTGCTGGCGCTGGCGCTGCTGGCCCAGGTTGCAGGCCGAATGCGGCGGCGCCGCTCGGCTGC 74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CAA 90 bp | CGCCGTCTCCAGCGGGCACGGAGGAGCGCCAGGCCGCTGAGCGTATaGCACACTAATGCCGCAAGGAGCGCGGCCAGGCCAAGGCCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RRLQRARRSARPLSV*HTNAARSAARPRPA Trigger: CGCCGGCCTTGGCCTGGCCGCGCTCCTTGCGGCATTAGTGTGCAATACGCTCAGCGGCCTGGCGCTCCTCCGTGCCCGCTGGAGACGGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | CCCACGAGCTGGCCCACCATTTCCACATCGTGTGCGTaGACCCTGCGCGCGGAGCCGCCGCCCCGAGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PTSWPTISTSCA*TLRAEPPPREL Trigger: CAGCTCTCGGGGCGGCGGCTCCGCGCGCAGGGTTCACGCACACGATGTGGAAATGGTGGGCCAGCTCGTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | GCCGTCTCCAGCGGGCACGGAGGAGCGCCAGGCCGCTaGGCGTATTGCACACTAATGCCGCAAGGAGCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AVSSGHGGAPGR*AYCTLMPQGAR Trigger: CCGCGCTCCTTGCGGCATTAGTGTGCAATACGCTCAGCGGCCTGGCGCTCCTCCGTGCCCGCTGGAGACGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | CGCCCCGAGAGCTGCGGAGGGTGGCTGTGGCTGAAGTaGTGGATGAGGCAGACGAGGCGGAGGCCAAGCGGG | + |
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Preference number: 6 (lower is better) Translates to: RPESCGGWLWLK*WMRQTRRRPSG Trigger: CCCGCTTGGCCTCCGCCTCGTCTGCCTCATCCATCACTTCAGCCACAGCCACCCTCCGCAGCTCTCGGGGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS GCA 72 bp | GATGCCCACGAGCTGGCCCACCATTTCCACATCGTGTaGGTGAACCCTGCGCGCGGAGCCGCCGCCCCGAGA | + |
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Preference number: 6 (lower is better) Translates to: DAHELAHHFHIV*VNPARGAAAPR Trigger: TCTCGGGGCGGCGGCTCCGCGCGCAGGGTTCACGCACACGATGTGGAAATGGTGGGCCAGCTCGTGGGCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | CGTGTACCAGTGGCAGCAGCGCCACTGCCAAAGCCATaGCAGCCAGCACGGCTAGTGCCAGGCGTGCGCGGG | + |
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Preference number: 6 (lower is better) Translates to: RVPVAAAPLPKP*QPARLVPGVRG Trigger: CCCGCGCACGCCTGGCACTAGCCGTGCTGGCTGCCATGGCTTTGGCAGTGGCGCTGCTGCCACTGGTACACG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CAA 72 bp | CAGCGGGCACGGAGGAGCGCCAGGCCGCTGAGCGTATaGCACACTAATGCCGCAAGGAGCGCGGCCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QRARRSARPLSV*HTNAARSAARP Trigger: TGGCCTGGCCGCGCTCCTTGCGGCATTAGTGTGCAATACGCTCAGCGGCCTGGCGCTCCTCCGTGCCCGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | CGATGGCAAGCAGGCTGGCGACGAACAACAGGAAGGTaGCAGCCGAGCGGCGCCGCCGCATTCGGCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: RWQAGWRRTTGR*QPSGAAAFGLQ Trigger: TTGCAGGCCGAATGCGGCGGCGCCGCTCGGCTGCCACCTTCCTGTTGTTCGTCGCCAGCCTGCTTGCCATCG 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | CCACAGATACGCGCGCCGCGTGGATCAGTGGCTGCGTaGCACCCACACAGCGCTCTACGGCCATGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: PQIRAPRGSVAA*HPHSALRPCHS Trigger: GCTGTGGCATGGCCGTAGAGCGCTGTGTGGGTGTCACGCAGCCACTGATCCACGCGGCGCGCGTATCTGTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | CACAGGCCGAAGAAGACCATGCAGCCACCCAGGAAATaGCACGCCCCTCCAGCAGGCGCACGCCCCGCAGTA | + |
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Preference number: 6 (lower is better) Translates to: HRPKKTMQPPRK*HAPPAGARPAV Trigger: TACTGCGGGGCGTGCGCCTGCTGGAGGGGCGTGTCATTTCCTGGGTGGCTGCATGGTCTTCTTCGGCCTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | CCAGGGCGCCCGGGATCACATGGCCTGCTAGGTCGATaGCAAGCAGGCTGGCGACGAACAACAGGAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PGRPGSHGLLGR*QAGWRRTTGRW Trigger: CCACCTTCCTGTTGTTCGTCGCCAGCCTGCTTGCCATCGACCTAGCAGGCCATGTGATCCCGGGCGCCCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | GTATACAGGCGAAGCACCAGGGCGCCCGGGATCACATaGCCTGCTAGGTCGATGGCAAGCAGGCTGGCGACG | + |
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Preference number: 6 (lower is better) Translates to: VYRRSTRAPGIT*PARSMASRLAT Trigger: CGTCGCCAGCCTGCTTGCCATCGACCTAGCAGGCCATGTGATCCCGGGCGCCCTGGTGCTTCGCCTGTATAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | CCCTCAGGGGTAGGAGGCGAAGCAGTTGGCGCAGCATaGCCTGGCGCAGCAGGATGTACACCCATGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSGVGGEAVGAA*PGAAGCTPMGP Trigger: TGGACCCATGGGTGTACATCCTGCTGCGCCAGGCCATGCTGCGCCAACTGCTTCGCCTCCTACCCCTGAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CAA 90 bp | GCTTCCCAGGCACTCTTGGTTAGGCCCAGCTCCGTTGGACCACCCTaGGCACTGACCCTCAGGGGTAGGAGGCGAAGCAGTTGGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ASQALLVRPSSVGPP*ALTLRGRRRSSWRS Trigger: GCTGCGCCAACTGCTTCGCCTCCTACCCCTGAGGGTCAGTGCCAAGGGTGGTCCAACGGAGCTGGGCCTAACCAAGAGTGCCTGGGAAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | TGGTTAGGCCCAGCTCCGTTGGACCACCCTTGGCACTaGCCCTCAGGGGTAGGAGGCGAAGCAGTTGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: WLGPAPLDHPWH*PSGVGGEAVGA Trigger: TGCGCCAACTGCTTCGCCTCCTACCCCTGAGGGTCAGTGCCAAGGGTGGTCCAACGGAGCTGGGCCTAACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | AGGCCAAGGCCGGCGAAGAGGCCGGCAAGCAACGCCTaGCGCCAACCTCCACGAGGCCCAAGGCTAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: RPRPAKRPASNA*RQPPRGPRLIK Trigger: TTTTATTAGCCTTGGGCCTCGTGGAGGTTGGCGCCAGGCGTTGCTTGCCGGCCTCTTCGCCGGCCTTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | TTGGCACTGACCCTCAGGGGTAGGAGGCGAAGCAGTTaGCGCAGCATGGCCTGGCGCAGCAGGATGTACACC | + |
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Preference number: 6 (lower is better) Translates to: LALTLRGRRRSS*RSMAWRSRMYT Trigger: GGTGTACATCCTGCTGCGCCAGGCCATGCTGCGCCAACTGCTTCGCCTCCTACCCCTGAGGGTCAGTGCCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CAA 90 bp | CCACTGTGCCGGGAACTACGCAGTGAACTGGCTTCCCAGGCACTCTaGGTTAGGCCCAGCTCCGTTGGACCACCCTTGGCACTGACCCTC | + |
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Preference number: 6 (lower is better) Translates to: PLCRELRSELASQAL*VRPSSVGPPLALTL Trigger: GAGGGTCAGTGCCAAGGGTGGTCCAACGGAGCTGGGCCTAACCAAGAGTGCCTGGGAAGCCAGTTCACTGCGTAGTTCCCGGCACAGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | CCAGCAGGGGGCTCCAGCAGATGCACGACACCACCATaGTGCCCACGAGCTGGCCCACCATTTCCACATCGT | + |
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Preference number: 6 (lower is better) Translates to: PAGGSSRCTTPP*CPRAGPPFPHR Trigger: ACGATGTGGAAATGGTGGGCCAGCTCGTGGGCATCATGGTGGTGTCGTGCATCTGCTGGAGCCCCCTGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | CGCCTGTTGGCAGCACCACAGATGTATTGGGGAGCCTaGGTGTTGCGCACGTTGCTGCCTCATCCGCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: RLLAAPQMYWGA*VLRTLLPHPLG Trigger: GCCTAGCGGATGAGGCAGCAACGTGCGCAACACCCAGGCTCCCCAATACATCTGTGGTGCTGCCAACAGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CAA 72 bp | GCACTCTTGGTTAGGCCCAGCTCCGTTGGACCACCCTaGGCACTGACCCTCAGGGGTAGGAGGCGAAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: ALLVRPSSVGPP*ALTLRGRRRSS Trigger: ACTGCTTCGCCTCCTACCCCTGAGGGTCAGTGCCAAGGGTGGTCCAACGGAGCTGGGCCTAACCAAGAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CCA 72 bp | CTGGTTCCACGATGCGAGGCGTACAGCCAGAAAGAGTaGCCGCTGCAGGGAGTTAGAGTTCCAGCCCCCGAT | + |
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Preference number: 6 (lower is better) Translates to: LVPRCEAYSQKE*PLQGVRVPAPD Trigger: ATCGGGGGCTGGAACTCTAACTCCCTGCAGCGGCCACTCTTTCTGGCTGTACGCCTCGCATCGTGGAACCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CAA 72 bp | CGGGAACTACGCAGTGAACTGGCTTCCCAGGCACTCTaGGTTAGGCCCAGCTCCGTTGGACCACCCTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: RELRSELASQAL*VRPSSVGPPLA Trigger: TGCCAAGGGTGGTCCAACGGAGCTGGGCCTAACCAAGAGTGCCTGGGAAGCCAGTTCACTGCGTAGTTCCCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS CAA 72 bp | TTGGCAGCACCACAGATGTATTGGGGAGCCTGGGTGTaGCGCACGTTGCTGCCTCATCCGCTAGGCTCAGGT | + |
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Preference number: 6 (lower is better) Translates to: LAAPQMYWGAWV*RTLLPHPLGSG Trigger: ACCTGAGCCTAGCGGATGAGGCAGCAACGTGCGCAACACCCAGGCTCCCCAATACATCTGTGGTGCTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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| CDS TCA 72 bp | AGCACCCAGCGTCATGGAGAAGATAGGCAGCGCTGGTaGTGTGCCATTATCGCCTGTTGGCAGCACCACAGA | + |
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Preference number: 6 (lower is better) Translates to: STQRHGEDRQRW*CAIIACWQHHR Trigger: TCTGTGGTGCTGCCAACAGGCGATAATGGCACATCACCAGCGCTGCCTATCTTCTCCATGACGCTGGGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019608.7 |
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