Pregenerated sensors for PTGDS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015090Ensembl transcript IDs: ENSMUST00000015234.13, ENSMUST00000114251.8, ENSMUST00000114259.3
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | AAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTaGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCAGGTCACCTGCG | + |
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Preference number: 2 (lower is better) Translates to: KLEGVEVLWGARAGI*RVTEQRSPEARSPA Trigger: CGCAGGTGACCTGGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114259.3 |
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| 3UTR CAA 90 bp | AAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTaGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCAGGTCACCATGT | + |
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Preference number: 2 (lower is better) Translates to: KLEGVEVLWGARAGI*RVTEQRSPEARSPC Trigger: ACATGGTGACCTGGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCAGGGCCATGCGGAAGTCCTaGCCTGGGCCCTTGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GARAGILRVTEQRSPEARAMRKS*PGPLVP Trigger: AGGCACCAAGGGCCCAGGCCAGGACTTCCGCATGGC...CCTGGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR TCA 90 bp | CTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGCTCCCGGAACCAGCTTaGGTTGGAGGCGAGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LWGARAGILRVTEQRSPELPEPA*VGGEAR Trigger: GCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAG...CTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCAGGACCACTGACACGGAGTaGATGCTGCCCGAGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GARAGILRVTEQRSPEARTTDTE*MLPEWG Trigger: CCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGGT...CCTGGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | AAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGGCCATGCGGAAGTCCTaGCCTGGGCCCTTGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KAKLEGVEVLWGARAGILAMRKS*PGPLVP Trigger: AGGCACCAAGGGCCCAGGCCAGGACTTCCGCATGGC...CAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | CAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGCCATGCGGAAGTCCTaGCCTGGGCCCTTGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: QGKAGGCRGTLGSQGWDLAMRKS*PGPLVP Trigger: AGGCACCAAGGGCCCAGGCCAGGACTTCCGCATGGC...AAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATGGCTGCACTGTGTCATaGCCCTGGGCTGGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: CQGKAGGCRGTLGSQGWDGCTVS*PWAGVC Trigger: ACAGACCCCAGCCCAGGGCCATGACACAGTGCAGCC...ATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGGGAACCAGCTTGAGTTaGAGGCGAGGCCCGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KLEGVEVLWGARAGILRVGTSLS*RRGPRC Trigger: ACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCC...CACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCAGGTTCTGCTGTAGAGGGTaGCCATGCGGAAGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: GARAGILRVTEQRSPEARFCCRG*PCGSPG Trigger: GCCAGGACTTCCGCATGGCCACCCTCTACAGCAGAA...CCTGGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR GCA 90 bp | AGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTGTAGAGGGTGGCCATaGGGAAGTCCTGGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: RGTLGSQGWDLESDRAKECRGWP*GSPGLG Trigger: GCCCAGGCCAGGACTTCCGCATGGCCACCCTCTACA...CTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR GCA 90 bp | TGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCTCAGAGTCTGGGTTCTaGTGTAGAGGGTGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: WGARAGILRVTEQRSPEASESGF*CRGWPC Trigger: GCATGGCCACCCTCTACAGCAGAACCCAGACTCTGA...GGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGCTGGGCTGGGGTCTGTaGGAATCCCAAGAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: FVKAKLEGVEVLWGARAGLGWGL*ESQETQ Trigger: CTGGGTCTCTTGGGATTCCCACAGACCCCAGCCCAG...CCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | GTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGGGCTGCACTGTGTCATaGCCCTGGGCTGGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: VEVLWGARAGILRVTEQRGCTVS*PWAGVC Trigger: ACAGACCCCAGCCCAGGGCCATGACACAGTGCAGCC...CCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | AGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGACCACTGACACGGAGTaGATGCTGCCCGAGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: RGTLGSQGWDLESDRAKETTDTE*MLPEWG Trigger: CCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGGT...CTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR GCA 90 bp | GGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGTCAGAGTCTGGGTTCTaGTGTAGAGGGTGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: GKAGGCRGTLGSQGWDLESESGF*CRGWPC Trigger: GCATGGCCACCCTCTACAGCAGAACCCAGACTCTGA...CTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | AAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTCTGGGCTGGGGTCTGTaGGAATCCCAAGAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: KAGGCRGTLGSQGWDLESLGWGL*ESQETQ Trigger: CTGGGTCTCTTGGGATTCCCACAGACCCCAGCCCAG...ACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | GTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTCTGGGCTGGGGTCTGTaGGAATCCCAAGAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: VLWGARAGILRVTEQRSPLGWGL*ESQETQ Trigger: CTGGGTCTCTTGGGATTCCCACAGACCCCAGCCCAG...AGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | GAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGACTGTGTCATGGCCCTaGGCTGGGGTCTGTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: EGVEVLWGARAGILRVTETVSWP*AGVCGN Trigger: ATTCCCACAGACCCCAGCCCAGGGCCATGACACAGT...CTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGCTGCACTGTGTCATaGCCCTGGGCTGGGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: FFVKAKLEGVEVLWGARAGCTVS*PWAGVC Trigger: ACAGACCCCAGCCCAGGGCCATGACACAGTGCAGCC...AGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGAACCAGCTTGAGTTaGAGGCGAGGCCCGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FFVKAKLEGVEVLWGARAGTSLS*RRGPRC Trigger: ACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCC...AGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCACCACTGACACGGAGTaGATGCTGCCCGAGTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: FLCQGKAGGCRGTLGSQGTTDTE*MLPEWG Trigger: CCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGGT...GCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGTTCTGCTGTAGAGGGTaGCCATGCGGAAGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: FVKAKLEGVEVLWGARAGFCCRG*PCGSPG Trigger: GCCAGGACTTCCGCATGGCCACCCTCTACAGCAGAA...CCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | CTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGTCCTCTGTGAGGCCCTaGGCCTTGCTAAAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LWGARAGILRVTEQRSPESSVRP*ALLKVV Trigger: CACCACCTTTAGCAAGGCCCAGGGCCTCACAGAGGA...CTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR TCA 90 bp | TTATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGCTCCCGGAACCAGCTTaGGTTGGAGGCGAGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LFLCQGKAGGCRGTLGSQLPEPA*VGGEAR Trigger: GCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAG...CTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR TCA 90 bp | GGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGCAGGCTGCAGTACCATaGTCTTGGTCTCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: GKAGGCRGTLGSQGWDLEQAAVP*SWSHTG Trigger: ACCAGTGTGAGACCAAGATCATGGTACTGCAGCCTG...CTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR GCA 90 bp | CTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGTCAGAGTCTGGGTTCTaGTGTAGAGGGTGGCCATGC | + |
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Preference number: 4 (lower is better) Translates to: LCQGKAGGCRGTLGSQGWSESGF*CRGWPC Trigger: GCATGGCCACCCTCTACAGCAGAACCCAGACTCTGA...CCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | AAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTACTGTGTCATGGCCCTaGGCTGGGGTCTGTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: KAGGCRGTLGSQGWDLESTVSWP*AGVCGN Trigger: ATTCCCACAGACCCCAGCCCAGGGCCATGACACAGT...ACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGCGTACTCGTCATAGTTaGCCTCCACCACTGACACGG | + |
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Preference number: 4 (lower is better) Translates to: KLEGVEVLWGARAGILRVRTRHS*PPPLTR Trigger: CCGTGTCAGTGGTGGAGGCCAACTATGACGAGTACG...CACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGCGTACTCGTCATAGTTaGCCTCCACCACTGACACGG | + |
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Preference number: 4 (lower is better) Translates to: FVKAKLEGVEVLWGARAGRTRHS*PPPLTR Trigger: CCGTGTCAGTGGTGGAGGCCAACTATGACGAGTACG...CCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | GTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTTCCTCTGTGAGGCCCTaGGCCTTGCTAAAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VLWGARAGILRVTEQRSPSSVRP*ALLKVV Trigger: CACCACCTTTAGCAAGGCCCAGGGCCTCACAGAGGA...AGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR TCA 90 bp | TTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGCAGGCTGCAGTACCATaGTCTTGGTCTCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: FVKAKLEGVEVLWGARAGQAAVP*SWSHTG Trigger: ACCAGTGTGAGACCAAGATCATGGTACTGCAGCCTG...CCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR GCA 90 bp | TATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGTGTAGAGGGTGGCCATaGGGAAGTCCTGGCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: YFFVKAKLEGVEVLWGARCRGWP*GSPGLG Trigger: GCCCAGGCCAGGACTTCCGCATGGCCACCCTCTACA...CCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGTCCTCTGTGAGGCCCTaGGCCTTGCTAAAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: CRGTLGSQGWDLESDRAKSSVRP*ALLKVV Trigger: CACCACCTTTAGCAAGGCCCAGGGCCTCACAGAGGA...CTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGCGTACTCGTCATAGTTaGCCTCCACCACTGACACGG | + |
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Preference number: 4 (lower is better) Translates to: CRGTLGSQGWDLESDRAKRTRHS*PPPLTR Trigger: CCGTGTCAGTGGTGGAGGCCAACTATGACGAGTACG...CTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR TCA 90 bp | CAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTAGGAACTTGTCTTGTTaGAAGTTGGGCTGCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: QGKAGGCRGTLGSQGWDLRNLSC*KLGCTV Trigger: CACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCT...AAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR TCA 90 bp | AAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGGAACTTGTCTTGTTaGAAGTTGGGCTGCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: KAKLEGVEVLWGARAGILRNLSC*KLGCTV Trigger: CACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCT...CAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR TCA 90 bp | TTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTCAGGCTGCAGTACCATaGTCTTGGTCTCACACTGGT | + |
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Preference number: 4 (lower is better) Translates to: FFVKAKLEGVEVLWGARAQAAVP*SWSHTG Trigger: ACCAGTGTGAGACCAAGATCATGGTACTGCAGCCTG...AGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTTTATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCGGAACCAGCTTGAGTTaGAGGCGAGGCCCGCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FYFFVKAKLEGVEVLWGAGTSLS*RRGPRC Trigger: ACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCC...GGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR CCA 90 bp | TTATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGTTCTGCTGTAGAGGGTaGCCATGCGGAAGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LFLCQGKAGGCRGTLGSQFCCRG*PCGSPG Trigger: GCCAGGACTTCCGCATGGCCACCCTCTACAGCAGAA...CTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR GCA 90 bp | GGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGGGCTACCACTGTCTTaGACATATACAATACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GGCRGTLGSQGWDLESDRGLPLS*TYTIQL Trigger: AAGCTGTATTGTATATGTGCAAGACAGTGGTAGCCC...TCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS-3UTR GCA 90 bp | GCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGGGCTACCACTGTCTTaGACATATACAATACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AKLEGVEVLWGARAGILRGLPLS*TYTIQL Trigger: AAGCTGTATTGTATATGTGCAAGACAGTGGTAGCCC...TCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR GCA 90 bp | CTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGGGCTACCACTGTCTTaGACATATACAATACAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCQGKAGGCRGTLGSQGWGLPLS*TYTIQL Trigger: AAGCTGTATTGTATATGTGCAAGACAGTGGTAGCCC...CCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CCA 90 bp | GGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAATCTTGGTCTCACACTaGTTTTTCCTGAGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGCRGTLGSQGWDLESDRILVSH*FFLRKV Trigger: TACCTTCCTCAGGAAAAACCAGTGTGAGACCAAGAT...TCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CCA 90 bp | GTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTATCTTGGTCTCACACTaGTTTTTCCTGAGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VLWGARAGILRVTEQRSPILVSH*FFLRKV Trigger: TACCTTCCTCAGGAAAAACCAGTGTGAGACCAAGAT...AGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR TCA 90 bp | TATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGAGGAACTTGTCTTGTTaGAAGTTGGGCTGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YFFVKAKLEGVEVLWGARRNLSC*KLGCTV Trigger: CACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCT...CCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCATCTTGGTCTCACACTaGTTTTTCCTGAGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLCQGKAGGCRGTLGSQGILVSH*FFLRKV Trigger: TACCTTCCTCAGGAAAAACCAGTGTGAGACCAAGAT...GCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS GCA 90 bp | CGTACTCGTCATAGTTGGCCTCCACCACTGACACGGAGTGGATGCTaGCCGAGTGGGGGCTGCTGTAGGTGTAGTGTCCAGGAGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: RTRHSWPPPLTRSGC*PSGGCCRCSVQEPP Trigger: CGGGGGCTCCTGGACACTACACCTACAGCAGCCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGGTGGAGGCCAACTATGACGAGTACG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS GCA 90 bp | GAGCGTACTCGTCATAGTTGGCCTCCACCACTGACACGGAGTGGATaGTGCCCGAGTGGGGGCTGCTGTAGGTGTAGTGTCCAGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERTRHSWPPPLTRSG*CPSGGCCRCSVQEP Trigger: GGGCTCCTGGACACTACACCTACAGCAGCCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGGTGGAGGCCAACTATGACGAGTACGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS CCA 90 bp | GGCCCGCGCTGTACCAGCGCCCCAGGAACTTGTCTTGTTGAAAGTTaGGCTGCACTGTGTCATGGCCCTGGGCTGGGGTCTGTGGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: GPRCTSAPGTCLVES*AALCHGPGLGSVGI Trigger: GATTCCCACAGACCCCAGCCCAGGGCCATGACACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCTGGGGCGCTGGTACAGCGCGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | CTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGCGGAACCAGCTTGAGTaGGAGGCGAGGCCCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWGARAGILRVTEQRSPERNQLE*EARPAL Trigger: CAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCG...CTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGCGGAACCAGCTTGAGTaGGAGGCGAGGCCCGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FVKAKLEGVEVLWGARAGRNQLE*EARPAL Trigger: CAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCG...CCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS TCA 90 bp | GGGTGGCCATGCGGAAGTCCTGGCCTGGGCCCTTGGTGCCTCTGCTaGATAGCAGAGCGTACTCGTCATAGTTGGCCTCCACCACTGACA | + |
|
Preference number: 5 (lower is better) Translates to: GWPCGSPGLGPWCLC*IAERTRHSWPPPLT Trigger: TGTCAGTGGTGGAGGCCAACTATGACGAGTACGCTCTGCTATTCAGCAGAGGCACCAAGGGCCCAGGCCAGGACTTCCGCATGGCCACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | GGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGATCTCCCGGAACCAGCTaGAGTTGGAGGCGAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GGCRGTLGSQGWDLESDRSPGTS*SWRRGP Trigger: CGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGA...TCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | GGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCATCCTGGCCTGGGCCCTaGGTGCCTCTGCTGAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: GCRGTLGSQGWDLESDRASWPGP*VPLLNS Trigger: GCTATTCAGCAGAGGCACCAAGGGCCCAGGCCAGGA...TGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATTCCTGGCCTGGGCCCTaGGTGCCTCTGCTGAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: CQGKAGGCRGTLGSQGWDSWPGP*VPLLNS Trigger: GCTATTCAGCAGAGGCACCAAGGGCCCAGGCCAGGA...ATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | GGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCAGGGTGAGGCCCTGGGCCTaGCTAAAGGTGGTGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GARAGILRVTEQRSPEARVRPWA*LKVVNF Trigger: GAAATTCACCACCTTTAGCAAGGCCCAGGGCCTCAC...CCTGGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS CCA 90 bp | CTTGTCTTGTTGAAAGTTGGGCTGCACTGTGTCATGGCCCTGGGCTaGGGTCTGTGGGAATCCCAAGAGACCCAGGAGGACCAAACCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVLLKVGLHCVMALG*GLWESQETQEDQTH Trigger: ATGGGTTTGGTCCTCCTGGGTCTCTTGGGATTCCCACAGACCCCAGCCCAGGGCCATGACACAGTGCAGCCCAACTTTCAACAAGACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTAAGGTAGAGGTGAGATaGAGGCCGCCTTCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QGKAGGCRGTLGSQGWDLKVEVR*RPPSVE Trigger: CTCCACAGAAGGCGGCCTCAATCTCACCTCTACCTT...AAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | AAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAAGGTAGAGGTGAGATaGAGGCCGCCTTCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: KAKLEGVEVLWGARAGILKVEVR*RPPSVE Trigger: CTCCACAGAAGGCGGCCTCAATCTCACCTCTACCTT...CAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGGTGAGGCCCTGGGCCTaGCTAAAGGTGGTGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGVEVLWGARAGILRVTEVRPWA*LKVVNF Trigger: GAAATTCACCACCTTTAGCAAGGCCCAGGGCCTCAC...CTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS TCA 90 bp | TGTCTTGCACATATACAATACAGCTTTCTTCTCCCGGAACCAGCTTaGGTTGGAGGCGAGGCCCGCGCTGTACCAGCGCCCCAGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: CLAHIQYSFLLPEPA*VGGEARAVPAPQEL Trigger: AAGTTCCTGGGGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTATATGTGCAAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS CCA 90 bp | TGCACATATACAATACAGCTTTCTTCTCCCGGAACCAGCTTGAGTTaGAGGCGAGGCCCGCGCTGTACCAGCGCCCCAGGAACTTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CTYTIQLSSPGTSLS*RRGPRCTSAPGTCL Trigger: AAGACAAGTTCCTGGGGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTATATGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGGAGTCCTGAGGCCCAGGAACTTGTCTTGTaGAAAGTTGGGCTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: WGARAGILRVTEQRSPEAQELVL*KVGLHC Trigger: ACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCTG...GGCCTCAGGACTCCTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGTCTCCCGGAACCAGCTaGAGTTGGAGGCGAGGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: LFLCQGKAGGCRGTLGSQSPGTS*SWRRGP Trigger: CGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGA...CTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGTGAGGCCCTGGGCCTaGCTAAAGGTGGTGAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KAGGCRGTLGSQGWDLESVRPWA*LKVVNF Trigger: GAAATTCACCACCTTTAGCAAGGCCCAGGGCCTCAC...ACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | GTCCTGAGGCCAGGTCACCATGTGACCAGCCCTCTGACTGACTTCTCTCACCTGGGGGCTACCACTGTCTaGCACATATACAATACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLRPGHHVTSPLTDFSHLGATTV*HIYNTA Trigger: AGCTGTATTGTATATGTGCAAGACAGTGGTAGCCCC...CAGGTGAGAGAAGTCAGTCAGAGGGCTGGTCACATGGTGACCTGGCCTCAGGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 |
||
| CDS CCA 90 bp | TTATCCGGTTGGGGCAGGAAAACAATGTCCTCCTCTGTGAGGCCCTaGGCCTTGCTAAAGGTGGTGAATTTCTCCTTCAGCTCGTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSGWGRKTMSSSVRP*ALLKVVNFSFSSSF Trigger: GAAGGACGAGCTGAAGGAGAAATTCACCACCTTTAGCAAGGCCCAGGGCCTCACAGAGGAGGACATTGTTTTCCTGCCCCAACCGGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | AAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGCAGGAACTTGTCTTGTaGAAAGTTGGGCTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KAKLEGVEVLWGARAGILQELVL*KVGLHC Trigger: ACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCTG...CAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | GGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGGGGCTACCACTGTCTaGCACATATACAATACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GGCRGTLGSQGWDLESDRGATTV*HIYNTA Trigger: AGCTGTATTGTATATGTGCAAGACAGTGGTAGCCCC...TCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | CTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGGGGCTACCACTGTCTaGCACATATACAATACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LEGVEVLWGARAGILRVTGATTV*HIYNTA Trigger: AGCTGTATTGTATATGTGCAAGACAGTGGTAGCCCC...TGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TGTAGAGGTACTTTGGGGAGCCAGGGCTGGGATCTTGAGAGTGACAGAGCAAAGCAGGAACTTGTCTTGTaGAAAGTTGGGCTGCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: CRGTLGSQGWDLESDRAKQELVL*KVGLHC Trigger: ACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCTG...CTTTGCTCTGTCACTCTCAAGATCCCAGCCCTGGCTCCCCAAAGTACCTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TTATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGAAGGTAGAGGTGAGATaGAGGCCGCCTTCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LFLCQGKAGGCRGTLGSQKVEVR*RPPSVE Trigger: CTCCACAGAAGGCGGCCTCAATCTCACCTCTACCTT...CTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGGCTGCAGTACCATGATCTaGGTCTCACACTGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLCQGKAGGCRGTLGSQGCSTMI*VSHWFF Trigger: GAAAAACCAGTGTGAGACCAAGATCATGGTACTGCA...GCCCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCAGGTGCAGTACCATGATCTaGGTCTCACACTGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YFFVKAKLEGVEVLWGARCSTMI*VSHWFF Trigger: GAAAAACCAGTGTGAGACCAAGATCATGGTACTGCA...CCTGGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS-3UTR CAA 90 bp | TTTTATTTCTTTGTCAAGGCAAAGCTGGAGGGTGTAGAGGTACTTTGGGGAGCCTGCAGTACCATGATCTaGGTCTCACACTGGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FYFFVKAKLEGVEVLWGACSTMI*VSHWFF Trigger: GAAAAACCAGTGTGAGACCAAGATCATGGTACTGCA...GGCTCCCCAAAGTACCTCTACACCCTCCAGCTTTGCCTTGACAAAGAAATAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS GCA 72 bp | CCACTGACACGGAGTGGATGCTGCCCGAGTGGGGGCTaGTGTAGGTGTAGTGTCCAGGAGCCCCCGCAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLTRSGCCPSGG*CRCSVQEPPQA Trigger: AGCCTGCGGGGGCTCCTGGACACTACACCTACAGCAGCCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS CCA 72 bp | GCTCGTCCTTCAGAGTCTGGGTTCTGCTGTAGAGGGTaGCCATGCGGAAGTCCTGGCCTGGGCCCTTGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ARPSESGFCCRG*PCGSPGLGPWC Trigger: GCACCAAGGGCCCAGGCCAGGACTTCCGCATGGCCACCCTCTACAGCAGAACCCAGACTCTGAAGGACGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS CCA 72 bp | GGGCTGCACTGTGTCATGGCCCTGGGCTGGGGTCTGTaGGAATCCCAAGAGACCCAGGAGGACCAAACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GLHCVMALGWGL*ESQETQEDQTH Trigger: ATGGGTTTGGTCCTCCTGGGTCTCTTGGGATTCCCACAGACCCCAGCCCAGGGCCATGACACAGTGCAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS GCA 72 bp | CATAGTTGGCCTCCACCACTGACACGGAGTGGATGCTaGCCGAGTGGGGGCTGCTGTAGGTGTAGTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HSWPPPLTRSGC*PSGGCCRCSVQ Trigger: CTGGACACTACACCTACAGCAGCCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGGTGGAGGCCAACTATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS GCA 72 bp | CGTCATAGTTGGCCTCCACCACTGACACGGAGTGGATaGTGCCCGAGTGGGGGCTGCTGTAGGTGTAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RHSWPPPLTRSG*CPSGGCCRCSV Trigger: GACACTACACCTACAGCAGCCCCCACTCGGGCAGCATCCACTCCGTGTCAGTGGTGGAGGCCAACTATGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS CCA 72 bp | ACAATACAGCTTTCTTCTCCCGGAACCAGCTTGAGTTaGAGGCGAGGCCCGCGCTGTACCAGCGCCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TIQLSSPGTSLS*RRGPRCTSAPG Trigger: TCCTGGGGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
||
| CDS CAA 72 bp | GAGGCCCGCGCTGTACCAGCGCCCCAGGAACTTGTCTaGTTGAAAGTTGGGCTGCACTGTGTCATGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: EARAVPAPQELV*LKVGLHCVMAL Trigger: CAGGGCCATGACACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCTGGGGCGCTGGTACAGCGCGGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 72 bp | TACAATACAGCTTTCTTCTCCCGGAACCAGCTTGAGTaGGAGGCGAGGCCCGCGCTGTACCAGCGCCCCAGG | + |
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Preference number: 6 (lower is better) Translates to: YNTAFFSRNQLE*EARPALYQRPR Trigger: CCTGGGGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CCA 72 bp | TTGAAAGTTGGGCTGCACTGTGTCATGGCCCTGGGCTaGGGTCTGTGGGAATCCCAAGAGACCCAGGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: LKVGLHCVMALG*GLWESQETQED Trigger: GTCCTCCTGGGTCTCTTGGGATTCCCACAGACCCCAGCCCAGGGCCATGACACAGTGCAGCCCAACTTTCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS TCA 72 bp | CATATACAATACAGCTTTCTTCTCCCGGAACCAGCTTaGGTTGGAGGCGAGGCCCGCGCTGTACCAGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: HIQYSFLLPEPA*VGGEARAVPAP Trigger: GGGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTATATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CCA 72 bp | TGTACCAGCGCCCCAGGAACTTGTCTTGTTGAAAGTTaGGCTGCACTGTGTCATGGCCCTGGGCTGGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: CTSAPGTCLVES*AALCHGPGLGS Trigger: AGACCCCAGCCCAGGGCCATGACACAGTGCAGCCCAACTTTCAACAAGACAAGTTCCTGGGGCGCTGGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 90 bp | CTGTCTTGCACATATACAATACAGCTTTCTTCTCCCGGAACCAGCTaGAGTTGGAGGCGAGGCCCGCGCTGTACCAGCGCCCCAGGAACT | + |
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Preference number: 6 (lower is better) Translates to: LSCTYTIQLSSPGTS*SWRRGPRCTSAPGT Trigger: AGTTCCTGGGGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTATATGTGCAAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS GCA 72 bp | ATTTCTCCTTCAGCTCGTCCTTCAGAGTCTGGGTTCTaGTGTAGAGGGTGGCCATGCGGAAGTCCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ISPSARPSESGF*CRGWPCGSPGL Trigger: CAGGCCAGGACTTCCGCATGGCCACCCTCTACAGCAGAACCCAGACTCTGAAGGACGAGCTGAAGGAGAAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 72 bp | ACATATACAATACAGCTTTCTTCTCCCGGAACCAGCTaGAGTTGGAGGCGAGGCCCGCGCTGTACCAGCGCC | + |
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Preference number: 6 (lower is better) Translates to: TYTIQLSSPGTS*SWRRGPRCTSA Trigger: GGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTATATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 90 bp | TTGCACATATACAATACAGCTTTCTTCTCCCGGAACCAGCTTGAGTaGGAGGCGAGGCCCGCGCTGTACCAGCGCCCCAGGAACTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LHIYNTAFFSRNQLE*EARPALYQRPRNLS Trigger: AGACAAGTTCCTGGGGCGCTGGTACAGCGCGGGCCTCGCCTCCAACTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTATATGTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 72 bp | TCACACTGGTTTTTCCTGAGGAAGGTAGAGGTGAGATaGAGGCCGCCTTCTGTGGAGGGGGCTACCACTGTC | + |
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Preference number: 6 (lower is better) Translates to: SHWFFLRKVEVR*RPPSVEGATTV Trigger: GACAGTGGTAGCCCCCTCCACAGAAGGCGGCCTCAATCTCACCTCTACCTTCCTCAGGAAAAACCAGTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 90 bp | GGTTGGGGCAGGAAAACAATGTCCTCCTCTGTGAGGCCCTGGGCCTaGCTAAAGGTGGTGAATTTCTCCTTCAGCTCGTCCTTCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: GWGRKTMSSSVRPWA*LKVVNFSFSSSFRV Trigger: GACTCTGAAGGACGAGCTGAAGGAGAAATTCACCACCTTTAGCAAGGCCCAGGGCCTCACAGAGGAGGACATTGTTTTCCTGCCCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 90 bp | GAGGTGAGATTGAGGCCGCCTTCTGTGGAGGGGGCTACCACTGTCTaGCACATATACAATACAGCTTTCTTCTCCCGGAACCAGCTTGAG | + |
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Preference number: 6 (lower is better) Translates to: EVRLRPPSVEGATTV*HIYNTAFFSRNQLE Trigger: CTCAAGCTGGTTCCGGGAGAAGAAAGCTGTATTGTATATGTGCAAGACAGTGGTAGCCCCCTCCACAGAAGGCGGCCTCAATCTCACCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 72 bp | TTGAGGCCGCCTTCTGTGGAGGGGGCTACCACTGTCTaGCACATATACAATACAGCTTTCTTCTCCCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: LRPPSVEGATTV*HIYNTAFFSRN Trigger: GTTCCGGGAGAAGAAAGCTGTATTGTATATGTGCAAGACAGTGGTAGCCCCCTCCACAGAAGGCGGCCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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| CDS CAA 72 bp | AGGAAAACAATGTCCTCCTCTGTGAGGCCCTGGGCCTaGCTAAAGGTGGTGAATTTCTCCTTCAGCTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RKTMSSSVRPWA*LKVVNFSFSSS Trigger: GGACGAGCTGAAGGAGAAATTCACCACCTTTAGCAAGGCCCAGGGCCTCACAGAGGAGGACATTGTTTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000015234.13 ENSMUST00000114251.8 ENSMUST00000114259.3 |
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