Pregenerated sensors for PTGDR2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034117Ensembl transcript IDs: ENSMUST00000037261.4
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCCTACCTGTAGGTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTaGCAGGCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATT | + |
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Preference number: 1 (lower is better) Translates to: PPTCRLEVMAARPSP*QAANKGRLFSLPRI Trigger: AATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTGCCTGGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAACCTACAGGTAGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 90 bp | TCCGGGAGATTGAGTCACTCAGGACACTTCCATAAGCTGGTTGCCTaGACCCTCCCCAAGACTTGGGCCTGGCATTGGCTATGTACATTT | + |
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Preference number: 1 (lower is better) Translates to: SGRLSHSGHFHKLVA*TLPKTWAWHWLCTF Trigger: AAATGTACATAGCCAATGCCAGGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGTGTCCTGAGTGACTCAATCTCCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 90 bp | GTAGAAACCTGGAGGCCAGCAGTCAAGAGCCAGGTAACTCCTCGATaGCTACTTTTGCATCTTGTTGCTCTCCCAGGTCCATACTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VETWRPAVKSQVTPR*LLLHLVALPGPYCK Trigger: CTTGCAGTATGGACCTGGGAGAGCAACAAGATGCAAAAGTAGCCATCGAGGAGTTACCTGGCTCTTGACTGCTGGCCTCCAGGTTTCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR TCA 90 bp | CTGATTGGCCGACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTATaGGATGCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: LIGRLPLSHSQSREL*DAGCELNLCDSQVP Trigger: AGGCACTTGGGAATCACACAGGTTAAGCTCACAGCCTGCATCTCATAACTCCCTGCTTTGTGAATGGGACAAAGGGAGTCGGCCAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR TCA 90 bp | TTGGCTGGTCTCAACCCTTTTCCTCTCACTGACCCCCATAAATACTaGTTGGCCGACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: LAGLNPFPLTDPHKY*LADSLCPIHKAGSY Trigger: ATAACTCCCTGCTTTGTGAATGGGACAAAGGGAGTCGGCCAATCAGTATTTATGGGGGTCAGTGAGAGGAAAAGGGTTGAGACCAGCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 90 bp | CTGGTCTCAACCCTTTTCCTCTCACTGACCCCCATAAATACTGATTaGCCGACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTATGAGA | + |
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Preference number: 1 (lower is better) Translates to: LVSTLFLSLTPINTD*PTPFVPFTKQGVMR Trigger: TCTCATAACTCCCTGCTTTGTGAATGGGACAAAGGGAGTCGGCCAATCAGTATTTATGGGGGTCAGTGAGAGGAAAAGGGTTGAGACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR TCA 90 bp | GCCCCTCCTACCTGTAGGTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGTTGATCCAGTGCTGCTaGAAGCCAGCAGCAGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: APPTCRLEVMAARPSPCQLIQCC*KPAAAA Trigger: GGCTGCTGCTGCTGGCTTTCAGCAGCACTGGATCAA...CTGGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAACCTACAGGTAGGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR CCA 90 bp | GCCCCTCCTACCTGTAGGTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGCTGTCTCAGGCCAAATaGGGGATTAAAAATGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: APPTCRLEVMAARPSPCQLSQAK*GIKNDG Trigger: GCCATCATTTTTAATCCCCCATTTGGCCTGAGACAG...CTGGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAACCTACAGGTAGGAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR CCA 90 bp | TGTGATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAACATAAGCTGGTTGCCTaGACCCTCCCCAAGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: CDRRSMTGTGAPPTCRLEHKLVA*TLPKTW Trigger: CCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATG...TTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR GCA 90 bp | TACCAATTTCTGACATCAGCTCCCCTTCCCCTAGAAGGTAAAGAGGAATCAGCCGCCAGGCCCTCTCCCTaGCAGGCAGCTAATAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: YQFLTSAPLPLEGKEESAARPSP*QAANKG Trigger: ACCCTTATTAGCTGCCTGGCAGGGAGAGGGCCTGGC...GGCTGATTCCTCTTTACCTTCTAGGGGAAGGGGAGCTGATGTCAGAAATTGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR GCA 90 bp | CCCGAAGGACAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATCAACCAGCCTGGCCTTaGGTGGTTCAGGAGATCCTG | + |
|
Preference number: 2 (lower is better) Translates to: PEGQKPLPHLAFIIIINHQPAWP*VVQEIL Trigger: CAGGATCTCCTGAACCACGCAAGGCCAGGCTGGTTG...ATGGTTTATTATGATAATGAAAGCCAAGTGGGGCAGGGGCTTCTGTCCTTCGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR CCA 90 bp | GCAAGATTAAAGTGTTTTAAAAGGACTGCTTCAATTCACCTTGCTCCGGGAGATACCCTCCCCAAGACTTaGGCCTGGCATTGGCTATGT | + |
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Preference number: 2 (lower is better) Translates to: ARLKCFKRTASIHLAPGDTLPKT*AWHWLC Trigger: ACATAGCCAATGCCAGGCCCAAGTCTTGGGGAGGGT...ATCTCCCGGAGCAAGGTGAATTGAAGCAGTCCTTTTAAAACACTTTAATCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR CCA 90 bp | AGTACTTTTGCTCTTAAATGTGTAGAAACCTGGAGGCCAGCAGTCAAGAGCCAGATGTACATTTTTAACTaGGTTTCAAGAGAGAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: STFALKCVETWRPAVKSQMYIFN*VSRERD Trigger: GTCTCTCTCTCTTGAAACCCAGTTAAAAATGTACAT...CTGGCTCTTGACTGCTGGCCTCCAGGTTTCTACACATTTAAGAGCAAAAGTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR CAA 90 bp | GCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTGCCAGGGCTACTTTTGCATCTaGTTGCTCTCCCAGGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: AGCELNLCDSQVPWASCQGYFCI*LLSQVH Trigger: ATGGACCTGGGAGAGCAACAAGATGCAAAAGTAGCC...CTGGCAGCTCGCCCAAGGCACTTGGGAATCACACAGGTTAAGCTCACAGCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 72 bp | TTGAGTCACTCAGGACACTTCCATAAGCTGGTTGCCTaGACCCTCCCCAAGACTTGGGCCTGGCATTGGCTA | + |
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Preference number: 3 (lower is better) Translates to: LSHSGHFHKLVA*TLPKTWAWHWL Trigger: TAGCCAATGCCAGGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGTGTCCTGAGTGACTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR TCA 72 bp | AGCAGGAGGGACTTGGTGACATTTTACTCTCCAGTTTaGGAAGCGCCTGCCACAGGCTTGAGGCCTGCTCAA | + |
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Preference number: 3 (lower is better) Translates to: SRRDLVTFYSPV*EAPATGLRPAQ Trigger: TTGAGCAGGCCTCAAGCCTGTGGCAGGCGCTTCTCAAACTGGAGAGTAAAATGTCACCAAGTCCCTCCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR TCA 72 bp | GGTTGTTCTCTCTGCCTAGAATTGATCCAGTGCTGCTaGAAGCCAGCAGCAGCAGCCCTAAAACTGGGCAGT | + |
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Preference number: 3 (lower is better) Translates to: GCSLCLELIQCC*KPAAAALKLGS Trigger: ACTGCCCAGTTTTAGGGCTGCTGCTGCTGGCTTTCAGCAGCACTGGATCAATTCTAGGCAGAGAGAACAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR GCA 72 bp | CTTGGTGACATTTTACTCTCCAGTTTGAGAAGCGCCTaGCACAGGCTTGAGGCCTGCTCAACACAACTGACA | + |
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Preference number: 3 (lower is better) Translates to: LGDILLSSLRSA*HRLEACSTQLT Trigger: TGTCAGTTGTGTTGAGCAGGCCTCAAGCCTGTGGCAGGCGCTTCTCAAACTGGAGAGTAAAATGTCACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 72 bp | TTCCATAAGCTGGTTGCCTGGACCCTCCCCAAGACTTaGGCCTGGCATTGGCTATGTACATTTTTAACTGGG | + |
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Preference number: 3 (lower is better) Translates to: FHKLVAWTLPKT*AWHWLCTFLTG Trigger: CCCAGTTAAAAATGTACATAGCCAATGCCAGGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR TCA 72 bp | CGACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTATaGGATGCAGGCTGTGAGCTTAACCTGTGTGATTCC | + |
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Preference number: 3 (lower is better) Translates to: RLPLSHSQSREL*DAGCELNLCDS Trigger: GGAATCACACAGGTTAAGCTCACAGCCTGCATCTCATAACTCCCTGCTTTGTGAATGGGACAAAGGGAGTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 72 bp | GTTGCCTGGACCCTCCCCAAGACTTGGGCCTGGCATTaGCTATGTACATTTTTAACTGGGTTTCAAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: VAWTLPKTWAWH*LCTFLTGFQER Trigger: TCTCTCTTGAAACCCAGTTAAAAATGTACATAGCCAATGCCAGGCCCAAGTCTTGGGGAGGGTCCAGGCAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 72 bp | ACCCTTTTCCTCTCACTGACCCCCATAAATACTGATTaGCCGACTCCCTTTGTCCCATTCACAAAGCAGGGA | + |
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Preference number: 3 (lower is better) Translates to: TLFLSLTPINTD*PTPFVPFTKQG Trigger: TCCCTGCTTTGTGAATGGGACAAAGGGAGTCGGCCAATCAGTATTTATGGGGGTCAGTGAGAGGAAAAGGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCAAGTGCCTTGGGCGAGCTGCCAGGAAGGTAATAGAAATACAAAATTTTACACTTCCATAAGCTGGTaGCCTGGACCCTCCCCAAGA | + |
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Preference number: 3 (lower is better) Translates to: SQVPWASCQEGNRNTKFYTSISW*PGPSPR Trigger: TCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGT...GTAAAATTTTGTATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR TCA 72 bp | AAAAGGACTGCTTCAATTCACCTTGCTCCGGGAGATTaGGTCACTCAGGACACTTCCATAAGCTGGTTGCCT | + |
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Preference number: 3 (lower is better) Translates to: KRTASIHLAPGD*VTQDTSISWLP Trigger: AGGCAACCAGCTTATGGAAGTGTCCTGAGTGACTCAATCTCCCGGAGCAAGGTGAATTGAAGCAGTCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR TCA 72 bp | CTCAACCCTTTTCCTCTCACTGACCCCCATAAATACTaGTTGGCCGACTCCCTTTGTCCCATTCACAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: LNPFPLTDPHKY*LADSLCPIHKA Trigger: TGCTTTGTGAATGGGACAAAGGGAGTCGGCCAATCAGTATTTATGGGGGTCAGTGAGAGGAAAAGGGTTGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 72 bp | GGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTaGGCGAGCTGCCAGGAAGGTAATAGAAATACAAAA | + |
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Preference number: 3 (lower is better) Translates to: GCELNLCDSQVP*ASCQEGNRNTK Trigger: TTTTGTATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTGGGAATCACACAGGTTAAGCTCACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 72 bp | GACTTGGGCCTGGCATTGGCTATGTACATTTTTAACTaGGTTTCAAGAGAGAGAGACCCAGGATATGTTGGC | + |
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Preference number: 3 (lower is better) Translates to: DLGLALAMYIFN*VSRERDPGYVG Trigger: GCCAACATATCCTGGGTCTCTCTCTCTTGAAACCCAGTTAAAAATGTACATAGCCAATGCCAGGCCCAAGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR GCA 72 bp | CTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTaGCAGGAAGGTAATAGAAATACAAAATTTTACCCG | + |
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Preference number: 3 (lower is better) Translates to: LNLCDSQVPWAS*QEGNRNTKFYP Trigger: CGGGTAAAATTTTGTATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTGGGAATCACACAGGTTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CCA 72 bp | CAATTAAGTACTTTTGCTCTTAAATGTGTAGAAACCTaGAGGCCAGCAGTCAAGAGCCAGGTAACTCCTCGA | + |
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Preference number: 3 (lower is better) Translates to: QLSTFALKCVET*RPAVKSQVTPR Trigger: TCGAGGAGTTACCTGGCTCTTGACTGCTGGCCTCCAGGTTTCTACACATTTAAGAGCAAAAGTACTTAATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR TCA 90 bp | GCCCCTCCTACCTGTAGGTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGCTGCCAGGAAGTAGGTaGAGAAAGGCAGGGAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: APPTCRLEVMAARPSPCQLPGSR*RKAGRR Trigger: CCGCCTCCCTGCCTTTCTTCACCTACTTCCTGGCAG...CTGGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAACCTACAGGTAGGAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR TCA 90 bp | GCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTGCCAGGCAGCACCCAGGTGGTaGCCACTGTCTGGCGCATGC | + |
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Preference number: 4 (lower is better) Translates to: AGCELNLCDSQVPWASCQAAPRW*PLSGAC Trigger: GCATGCGCCAGACAGTGGTCACCACCTGGGTGCTGC...CTGGCAGCTCGCCCAAGGCACTTGGGAATCACACAGGTTAAGCTCACAGCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | GCCCCTCCTACCTGTAGGTTGGAAGTGATGGCTGCCAGGCCCTCTCCCTGCCAGAGGCTCACGGCTACGTaGCTCGAGGCAATTATGGCC | + |
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Preference number: 4 (lower is better) Translates to: APPTCRLEVMAARPSPCQRLTAT*LEAIMA Trigger: GGCCATAATTGCCTCGAGCCACGTAGCCGTGAGCCT...CTGGCAGGGAGAGGGCCTGGCAGCCATCACTTCCAACCTACAGGTAGGAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | CACTTCCATAAGCTGGTTGCCTGGACCCTCCCCAAGACTTGGGCCTGGCATTGGCTCTGGCGACCACGGTaGTGCAGTCGCAGGCTCACG | + |
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Preference number: 4 (lower is better) Translates to: HFHKLVAWTLPKTWAWHWLWRPR*CSRRLT Trigger: CGTGAGCCTGCGACTGCACCACCGTGGTCGCCAGAG...CCAATGCCAGGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR TCA 90 bp | CACTCAGGACACTTCCATAAGCTGGTTGCCTGGACCCTCCCCAAGACTTGGGCCAGAAGGCCAGGCTGGTaGCAAAGGGCAGCCCACGTG | + |
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Preference number: 4 (lower is better) Translates to: HSGHFHKLVAWTLPKTWARRPGW*QRAAHV Trigger: CACGTGGGCTGCCCTTTGTCACCAGCCTGGCCTTCT...GGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGTGTCCTGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR GCA 90 bp | CACTCAGGACACTTCCATAAGCTGGTTGCCTGGACCCTCCCCAAGACTTGGGCCACTGGCCTCACCACCTaGAGGCAGCGGTCCAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: HSGHFHKLVAWTLPKTWATGLTT*RQRSRL Trigger: TAGCCTGGACCGCTGCCTGCAGGTGGTGAGGCCAGT...GGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGTGTCCTGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR TCA 90 bp | GCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTGCCAGTGGCCAGAGGTACCATaGAGGCCAGCAGGAATTTGC | + |
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Preference number: 4 (lower is better) Translates to: AGCELNLCDSQVPWASCQWPEVP*RPAGIC Trigger: GCAAATTCCTGCTGGCCTTCATGGTACCTCTGGCCA...CTGGCAGCTCGCCCAAGGCACTTGGGAATCACACAGGTTAAGCTCACAGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR GCA 90 bp | GCAGGCTGTGAGCTTAACCTGTGTGATTCCCAAGTGCCTTGGGCGAGCTGCCAGCCACGAGTGGCCCACTaGCAGGAAGTAGGTGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: AGCELNLCDSQVPWASCQPRVAH*QEVGEE Trigger: TTCTTCACCTACTTCCTGGCAGTGGGCCACTCGTGG...CTGGCAGCTCGCCCAAGGCACTTGGGAATCACACAGGTTAAGCTCACAGCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | CACTCAGGACACTTCCATAAGCTGGTTGCCTGGACCCTCCCCAAGACTTGGGCCCTGTGGTTTGGAAGCTaGACCATCTCCTCCAAGAGT | + |
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Preference number: 4 (lower is better) Translates to: HSGHFHKLVAWTLPKTWALWFGS*TISSKS Trigger: ACTCTTGGAGGAGATGGTCCAGCTTCCAAACCACAG...GGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGTGTCCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR GCA 90 bp | AGTACTTTTGCTCTTAAATGTGTAGAAACCTGGAGGCCAGCAGTCAAGAGCCAGAGCGAGGCCAGCCCGTaGAACAGCACCGACACGTGG | + |
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Preference number: 4 (lower is better) Translates to: STFALKCVETWRPAVKSQSEASP*NSTDTW Trigger: CCACGTGTCGGTGCTGTTGCACGGGCTGGCCTCGCT...CTGGCTCTTGACTGCTGGCCTCCAGGTTTCTACACATTTAAGAGCAAAAGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR GCA 90 bp | CCCGAAGGACAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATTCGGATAGCGCCAGGTaGAGCACCCAGGTGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: PEGQKPLPHLAFIIIINHSDSAR*STQVVT Trigger: GGTCACCACCTGGGTGCTGCACCTGGCGCTATCCGA...ATGGTTTATTATGATAATGAAAGCCAAGTGGGGCAGGGGCTTCTGTCCTTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR GCA 90 bp | CCCGAAGGACAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATCGTGCGGTGGTTCTGTaGCCACACTGGCCTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: PEGQKPLPHLAFIIIINHRAVVL*PHWPHH Trigger: GTGGTGAGGCCAGTGTGGGCACAGAACCACCGCACG...ATGGTTTATTATGATAATGAAAGCCAAGTGGGGCAGGGGCTTCTGTCCTTCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CAA 72 bp | AGGCCCTCTCCCTGCCAGGCAGCTAATAAGGGTAGGTaGTTCTCTCTGCCTAGAATTGATCCAGTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: RPSPCQAANKGR*FSLPRIDPVLL Trigger: CAGCAGCACTGGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTGCCTGGCAGGGAGAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CAA 72 bp | AAGCAGGAGGGACTTGGTGACATTTTACTCTCCAGTTaGAGAAGCGCCTGCCACAGGCTTGAGGCCTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: KQEGLGDILLSS*RSACHRLEACS Trigger: TGAGCAGGCCTCAAGCCTGTGGCAGGCGCTTCTCAAACTGGAGAGTAAAATGTCACCAAGTCCCTCCTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR TCA 90 bp | AACCTGGAGGCCAGCAGTCAAGAGCCAGGTAACTCCTCGATGGCTACTTTTGCAAATATGGTATTGTGTTaGGCACCGCCAGAGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NLEASSQEPGNSSMATFANMVLC*APPEPR Trigger: TCTGGGCTCTGGCGGTGCTCAACACAATACCATATT...TGCAAAAGTAGCCATCGAGGAGTTACCTGGCTCTTGACTGCTGGCCTCCAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR TCA 90 bp | CCTGCCAGGCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCCAGAGTTGTAGTAGCACATaGTGCGGCCATCAAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: PARQLIRVGCSLCLELIQSCSST*CGHQAA Trigger: CGCGGCTTGATGGCCGCATCATGTGCTACTACAACT...CTGGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTGCCTGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | TCCCAAGTGCCTTGGGCGAGCTGCCAGGAAGGTAATAGAAATACAAAATTTTACGTGGTGACCACTGTCTaGCGCATGCGACAGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: SQVPWASCQEGNRNTKFYVVTTV*RMRQPT Trigger: GGTGGGCTGTCGCATGCGCCAGACAGTGGTCACCAC...GTAAAATTTTGTATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | CACTTCCATAAGCTGGTTGCCTGGACCCTCCCCAAGACTTGGGCCTGGCATTGGTCTGAACACGAAATATaGTATTGTGTTGAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: HFHKLVAWTLPKTWAWHWSEHEI*YCVEHR Trigger: GCGGTGCTCAACACAATACCATATTTCGTGTTCAGA...CCAATGCCAGGCCCAAGTCTTGGGGAGGGTCCAGGCAACCAGCTTATGGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR TCA 90 bp | GCAAGATTAAAGTGTTTTAAAAGGACTGCTTCAATTCACCTTGCTCCGGGAGATGCGCCTCCAGCAGACTaGAGATGTGGTAGGGCCCCC | + |
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Preference number: 4 (lower is better) Translates to: ARLKCFKRTASIHLAPGDAPPAD*RCGRAP Trigger: GGGGGCCCTACCACATCTTCAGTCTGCTGGAGGCGC...ATCTCCCGGAGCAAGGTGAATTGAAGCAGTCCTTTTAAAACACTTTAATCTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | GACTCCCTTTGTCCCATTCACAAAGCAGGGAGTTATGAGATGCAGGCTGTGAGCAGAGTTGCTGTGGTTTaGAAGCTGGACCATCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: DSLCPIHKAGSYEMQAVSRVAVV*KLDHLL Trigger: GAGGAGATGGTCCAGCTTCCAAACCACAGCAACTCT...GCTCACAGCCTGCATCTCATAACTCCCTGCTTTGTGAATGGGACAAAGGGAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CAA 72 bp | GGTTGCCTGGACCCTCCCCAAGACTTGGGCCTGGCATaGGCTATGTACATTTTTAACTGGGTTTCAAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GCLDPPQDLGLA*AMYIFNWVSRE Trigger: CTCTCTTGAAACCCAGTTAAAAATGTACATAGCCAATGCCAGGCCCAAGTCTTGGGGAGGGTCCAGGCAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR GCA 90 bp | TCCCAAGTGCCTTGGGCGAGCTGCCAGGAAGGTAATAGAAATACAAAATTTTACCCACTGTCTGGCGCATaGGACAGCCCACCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: SQVPWASCQEGNRNTKFYPLSGA*DSPPQT Trigger: TGTTTGTGGTGGGCTGTCGCATGCGCCAGACAGTGG...GTAAAATTTTGTATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | GCAAGATTAAAGTGTTTTAAAAGGACTGCTTCAATTCACCTTGCTCCGGGAGATCGAAGGCAACCACGATaGCCGCCACCAGGCGCACAA | + |
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Preference number: 4 (lower is better) Translates to: ARLKCFKRTASIHLAPGDRRQPR*PPPGAQ Trigger: TTGTGCGCCTGGTGGCGGCCATCGTGGTTGCCTTCG...ATCTCCCGGAGCAAGGTGAATTGAAGCAGTCCTTTTAAAACACTTTAATCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| 3UTR CAA 72 bp | TTAACTGGGTTTCAAGAGAGAGAGACCCAGGATATGTaGGCATGTCATCTGGGCTGTGCCGGTCTAATCCAA | + |
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Preference number: 4 (lower is better) Translates to: LTGFQERETQDM*ACHLGCAGLIQ Trigger: TTGGATTAGACCGGCACAGCCCAGATGACATGCCAACATATCCTGGGTCTCTCTCTCTTGAAACCCAGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CCA 90 bp | TCCCAAGTGCCTTGGGCGAGCTGCCAGGAAGGTAATAGAAATACAAAATTTTACGAACACATAGAGCAGTaGGTTGACCACGCTGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SQVPWASCQEGNRNTKFYEHIEQ*VDHAVE Trigger: TTCAACAGCGTGGTCAACCCACTGCTCTATGTGTTC...GTAAAATTTTGTATTTCTATTACCTTCCTGGCAGCTCGCCCAAGGCACTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | TGGACGCAGTTGGGGAATTCGGTCAGCCAGCAGGAGGGTAGAGGCTaGGGTGGCGGTGGAGGAGGCGCGGCGACGGCGATTGCGGAGCCC | + |
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Preference number: 5 (lower is better) Translates to: WTQLGNSVSQQEGRG*GGGGGGAATAIAEP Trigger: GGGCTCCGCAATCGCCGTCGCCGCGCCTCCTCCACCGCCACCCCAGCCTCTACCCTCCTGCTGGCTGACCGAATTCCCCAACTGCGTCCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | GCCCAGAGCATCAGGCAGACTCTGTGCGCGACCGCCACCGTGCGGTaGTTCTGTGCCCACACTGGCCTCACCACCTGCAGGCAGCGGTCC | + |
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Preference number: 5 (lower is better) Translates to: AQSIRQTLCATATVR*FCAHTGLTTCRQRS Trigger: GGACCGCTGCCTGCAGGTGGTGAGGCCAGTGTGGGCACAGAACCACCGCACGGTGGCGGTCGCGCACAGAGTCTGCCTGATGCTCTGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | GCAACCACGATGGCCGCCACCAGGCGCACAAAGCGGCCTGTCCTCTaGCGACCACGGTGGTGCAGTCGCAGGCTCACGGCTACGTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ATTMAATRRTKRPVL*RPRWCSRRLTATWL Trigger: GAGCCACGTAGCCGTGAGCCTGCGACTGCACCACCGTGGTCGCCAGAGGACAGGCCGCTTTGTGCGCCTGGTGGCGGCCATCGTGGTTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | GCGGTGGAGGAGGCGCGGCGACGGCGATTGCGGAGCCCACCACTCTaGTCGCTGTCTTCTACCAGCACGCTTTCAAGCACCGCGCGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVEEARRRRLRSPPL*SLSSTSTLSSTARS Trigger: GCTACGCGCGGTGCTTGAAAGCGTGCTGGTAGAAGACAGCGACCAGAGTGGTGGGCTCCGCAATCGCCGTCGCCGCGCCTCCTCCACCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 90 bp | GCCACCAGGCGCACAAAGCGGCCTGTCCTCTGGCGACCACGGTGGTaGAGTCGCAGGCTCACGGCTACGTGGCTCGAGGCAATTATGGCC | + |
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Preference number: 5 (lower is better) Translates to: ATRRTKRPVLWRPRW*SRRLTATWLEAIMA Trigger: GGCCATAATTGCCTCGAGCCACGTAGCCGTGAGCCTGCGACTGCACCACCGTGGTCGCCAGAGGACAGGCCGCTTTGTGCGCCTGGTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | GCCGCCACCAGGCGCACAAAGCGGCCTGTCCTCTGGCGACCACGGTaGTGCAGTCGCAGGCTCACGGCTACGTGGCTCGAGGCAATTATG | + |
|
Preference number: 5 (lower is better) Translates to: AATRRTKRPVLWRPR*CSRRLTATWLEAIM Trigger: CATAATTGCCTCGAGCCACGTAGCCGTGAGCCTGCGACTGCACCACCGTGGTCGCCAGAGGACAGGCCGCTTTGTGCGCCTGGTGGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 90 bp | CATCAGGCAGACTCTGTGCGCGACCGCCACCGTGCGGTGGTTCTGTaGCCACACTGGCCTCACCACCTGCAGGCAGCGGTCCAGGCTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HQADSVRDRHRAVVL*PHWPHHLQAAVQAN Trigger: ATTAGCCTGGACCGCTGCCTGCAGGTGGTGAGGCCAGTGTGGGCACAGAACCACCGCACGGTGGCGGTCGCGCACAGAGTCTGCCTGATG 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 90 bp | AAGAAAGGCAGGGAGGCGGCGGCTAACAAGTCGGATAGCGCCAGGTaGAGCACCCAGGTGGTGACCACTGTCTGGCGCATGCGACAGCCC | + |
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Preference number: 5 (lower is better) Translates to: KKGREAAANKSDSAR*STQVVTTVWRMRQP Trigger: GGGCTGTCGCATGCGCCAGACAGTGGTCACCACCTGGGTGCTGCACCTGGCGCTATCCGACTTGTTAGCCGCCGCCTCCCTGCCTTTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 90 bp | AAGAAGGCCAGGCTGGTGACAAAGGGCAGCCCACGTGACGCGAGCTaGCGTAGCGTGGTGACAGAATGGGCACGCGCCTCCAGCAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: KKARLVTKGSPRDAS*RSVVTEWARASSRL Trigger: CAGTCTGCTGGAGGCGCGTGCCCATTCTGTCACCACGCTACGGCAGCTCGCGTCACGTGGGCTGCCCTTTGTCACCAGCCTGGCCTTCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | GTCCTCTGGCGACCACGGTGGTGCAGTCGCAGGCTCACGGCTACGTaGCTCGAGGCAATTATGGCCAGAGGTACCATGAAGGCCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VLWRPRWCSRRLTAT*LEAIMARGTMKASR Trigger: CCTGCTGGCCTTCATGGTACCTCTGGCCATAATTGCCTCGAGCCACGTAGCCGTGAGCCTGCGACTGCACCACCGTGGTCGCCAGAGGAC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CAA 90 bp | TGTGATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAAGCGCGGCGACGGCGATaGCGGAGCCCACCACTCTGG | + |
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Preference number: 5 (lower is better) Translates to: CDRRSMTGTGAPPTCRLEARRRR*RSPPLW Trigger: CCAGAGTGGTGGGCTCCGCAATCGCCGTCGCCGCGC...TTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | CAGGGCCTTCTGGCGGTAGTCGCACGTGGTGTCGCGGTCAGGCCCTaGATTCCAGAGCAGCAAGTTGTAGTAGCACATGATGCGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: QGLLAVVARGVAVRP*IPEQQVVVAHDAAI Trigger: GATGGCCGCATCATGTGCTACTACAACTTGCTGCTCTGGAATCCAGGGCCTGACCGCGACACCACGTGCGACTACCGCCAGAAGGCCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 90 bp | AAGTCGGATAGCGCCAGGTGCAGCACCCAGGTGGTGACCACTGTCTaGCGCATGCGACAGCCCACCACAAACAGGATGAGTCCGTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KSDSARCSTQVVTTV*RMRQPTTNRMSPFS Trigger: GGAAAACGGACTCATCCTGTTTGTGGTGGGCTGTCGCATGCGCCAGACAGTGGTCACCACCTGGGTGCTGCACCTGGCGCTATCCGACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CAA 90 bp | TGTGATAGAAGGTCCATGACTGGCACAGGTGCCCCTCCTACCTGTAGGTTGGAAAAGGCCAGCAGGAATTaGCTGACCGCCAGGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CDRRSMTGTGAPPTCRLEKASRN*LTARAF Trigger: GAAGGCCCTGGCGGTCAGCAAATTCCTGCTGGCCTT...TTCCAACCTACAGGTAGGAGGGGCACCTGTGCCAGTCATGGACCTTCTATCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CAA 90 bp | CCTGCCAGGCAGCTAATAAGGGTAGGTTGTTCTCTCTGCCTAGAATTGATCCAGAGCGAGCGCCGCAGTTaGTACAACATGTCGGGGCAT | + |
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Preference number: 5 (lower is better) Translates to: PARQLIRVGCSLCLELIQSERRS*YNMSGH Trigger: ATGCCCCGACATGTTGTACAAACTGCGGCGCTCGCT...CTGGATCAATTCTAGGCAGAGAGAACAACCTACCCTTATTAGCTGCCTGGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS-3UTR CAA 90 bp | CCCGAAGGACAGAAGCCCCTGCCCCACTTGGCTTTCATTATCATAATAAACCATCCGCTGGCAAACATGTaGAGGAAGAAGACCGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PEGQKPLPHLAFIIIINHPLANM*RKKTEE Trigger: TTCCTCGGTCTTCTTCCTCAACATGTTTGCCAGCGG...ATGGTTTATTATGATAATGAAAGCCAAGTGGGGCAGGGGCTTCTGTCCTTCGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 72 bp | CTGGGGTGGCGGTGGAGGAGGCGCGGCGACGGCGATTaGGGAGCCCACCACTCTGGTCGCTGTCTTCTACCA | + |
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Preference number: 6 (lower is better) Translates to: LGWRWRRRGDGD*GAHHSGRCLLP Trigger: TGGTAGAAGACAGCGACCAGAGTGGTGGGCTCCGCAATCGCCGTCGCCGCGCCTCCTCCACCGCCACCCCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 72 bp | ATGGCCGCCACCAGGCGCACAAAGCGGCCTGTCCTCTaGCGACCACGGTGGTGCAGTCGCAGGCTCACGGCT | + |
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Preference number: 6 (lower is better) Translates to: MAATRRTKRPVL*RPRWCSRRLTA Trigger: AGCCGTGAGCCTGCGACTGCACCACCGTGGTCGCCAGAGGACAGGCCGCTTTGTGCGCCTGGTGGCGGCCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CAA 90 bp | AGGGTAGAGGCTGGGGTGGCGGTGGAGGAGGCGCGGCGACGGCGATaGCGGAGCCCACCACTCTGGTCGCTGTCTTCTACCAGCACGCTT | + |
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Preference number: 6 (lower is better) Translates to: RVEAGVAVEEARRRR*RSPPLWSLSSTSTL Trigger: AAGCGTGCTGGTAGAAGACAGCGACCAGAGTGGTGGGCTCCGCAATCGCCGTCGCCGCGCCTCCTCCACCGCCACCCCAGCCTCTACCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 72 bp | CGCACAAAGCGGCCTGTCCTCTGGCGACCACGGTGGTaGAGTCGCAGGCTCACGGCTACGTGGCTCGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RTKRPVLWRPRW*SRRLTATWLEA Trigger: TGCCTCGAGCCACGTAGCCGTGAGCCTGCGACTGCACCACCGTGGTCGCCAGAGGACAGGCCGCTTTGTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 72 bp | AGGCTGGTGACAAAGGGCAGCCCACGTGACGCGAGCTaGCGTAGCGTGGTGACAGAATGGGCACGCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: RLVTKGSPRDAS*RSVVTEWARAS Trigger: GGAGGCGCGTGCCCATTCTGTCACCACGCTACGGCAGCTCGCGTCACGTGGGCTGCCCTTTGTCACCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 72 bp | ATCAGGCAGACTCTGTGCGCGACCGCCACCGTGCGGTaGTTCTGTGCCCACACTGGCCTCACCACCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: IRQTLCATATVR*FCAHTGLTTCR Trigger: CCTGCAGGTGGTGAGGCCAGTGTGGGCACAGAACCACCGCACGGTGGCGGTCGCGCACAGAGTCTGCCTGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS GCA 72 bp | AGGGAGGCGGCGGCTAACAAGTCGGATAGCGCCAGGTaGAGCACCCAGGTGGTGACCACTGTCTGGCGCATG | + |
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Preference number: 6 (lower is better) Translates to: REAAANKSDSAR*STQVVTTVWRM Trigger: CATGCGCCAGACAGTGGTCACCACCTGGGTGCTGCACCTGGCGCTATCCGACTTGTTAGCCGCCGCCTCCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS TCA 72 bp | ACAAGTCGGATAGCGCCAGGTGCAGCACCCAGGTGGTaGCCACTGTCTGGCGCATGCGACAGCCCACCACAA | + |
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Preference number: 6 (lower is better) Translates to: TSRIAPGAAPRW*PLSGACDSPPQ Trigger: TTGTGGTGGGCTGTCGCATGCGCCAGACAGTGGTCACCACCTGGGTGCTGCACCTGGCGCTATCCGACTTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 72 bp | AGCGCCAGGTGCAGCACCCAGGTGGTGACCACTGTCTaGCGCATGCGACAGCCCACCACAAACAGGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SARCSTQVVTTV*RMRQPTTNRMS Trigger: ACTCATCCTGTTTGTGGTGGGCTGTCGCATGCGCCAGACAGTGGTCACCACCTGGGTGCTGCACCTGGCGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 72 bp | CGACCACGGTGGTGCAGTCGCAGGCTCACGGCTACGTaGCTCGAGGCAATTATGGCCAGAGGTACCATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RPRWCSRRLTAT*LEAIMARGTMK Trigger: CTTCATGGTACCTCTGGCCATAATTGCCTCGAGCCACGTAGCCGTGAGCCTGCGACTGCACCACCGTGGTCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CAA 90 bp | AAGCCGCTGGCAAACATGTTGAGGAAGAAGACCGAGGAATGTAGCTaGCAGAAGGTAGTGCCCAGCTCCCACGAGTGGCCCACTGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KPLANMLRKKTEECS*QKVVPSSHEWPTAR Trigger: CCTGGCAGTGGGCCACTCGTGGGAGCTGGGCACTACCTTCTGCAAGCTACATTCCTCGGTCTTCTTCCTCAACATGTTTGCCAGCGGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 72 bp | CTGGCGGTAGTCGCACGTGGTGTCGCGGTCAGGCCCTaGATTCCAGAGCAGCAAGTTGTAGTAGCACATGAT | + |
|
Preference number: 6 (lower is better) Translates to: LAVVARGVAVRP*IPEQQVVVAHD Trigger: ATCATGTGCTACTACAACTTGCTGCTCTGGAATCCAGGGCCTGACCGCGACACCACGTGCGACTACCGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CAA 90 bp | TCAAGCCGCGGGATGGTGTCTCTGAACACGAAATATGGTATTGTGTaGAGCACCGCCAGAGCCCAGAGCATCAGGCAGACTCTGTGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSRGMVSLNTKYGIV*STARAQSIRQTLCA Trigger: CGCGCACAGAGTCTGCCTGATGCTCTGGGCTCTGGCGGTGCTCAACACAATACCATATTTCGTGTTCAGAGACACCATCCCGCGGCTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CAA 72 bp | GCAAACATGTTGAGGAAGAAGACCGAGGAATGTAGCTaGCAGAAGGTAGTGCCCAGCTCCCACGAGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ANMLRKKTEECS*QKVVPSSHEWP Trigger: GGGCCACTCGTGGGAGCTGGGCACTACCTTCTGCAAGCTACATTCCTCGGTCTTCTTCCTCAACATGTTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CCA 72 bp | ATCAAGCCGCGGGATGGTGTCTCTGAACACGAAATATaGTATTGTGTTGAGCACCGCCAGAGCCCAGAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: IKPRDGVSEHEI*YCVEHRQSPEH Trigger: ATGCTCTGGGCTCTGGCGGTGCTCAACACAATACCATATTTCGTGTTCAGAGACACCATCCCGCGGCTTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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| CDS CAA 72 bp | GGGATGGTGTCTCTGAACACGAAATATGGTATTGTGTaGAGCACCGCCAGAGCCCAGAGCATCAGGCAGACT | + |
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Preference number: 6 (lower is better) Translates to: GMVSLNTKYGIV*STARAQSIRQT Trigger: AGTCTGCCTGATGCTCTGGGCTCTGGCGGTGCTCAACACAATACCATATTTCGTGTTCAGAGACACCATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037261.4 |
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