Pregenerated sensors for PTER (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026730Ensembl transcript IDs: ENSMUST00000028063.7, ENSMUST00000114796.9, ENSMUST00000134794.8, ENSMUST00000154269.7
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGACCTCTAAGGAGCATCTTAGGAACAATGTTGGTAAGGATGTGTaGGTAGCCGTGACCTCCGTACTTCATCAACCGATGCTTTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: QTSKEHLRNNVGKDV*VAVTSVLHQPMLCV Trigger: CACACAAAGCATCGGTTGATGAAGTACGGAGGTCACGGCTACTCACACATCCTTACCAACATTGTTCCTAAGATGCTCCTTAGAGGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| 3UTR TCA 90 bp | TCAGAAAGTCAAATCACAGTAGATTCCAGTGCCCTATGTCACACATaGGACCTAGTTGATCCCATGGTAACTGTGTTCCACATGCAATCC | + |
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Preference number: 1 (lower is better) Translates to: SESQITVDSSALCHT*DLVDPMVTVFHMQS Trigger: GGATTGCATGTGGAACACAGTTACCATGGGATCAACTAGGTCTCATGTGTGACATAGGGCACTGGAATCTACTGTGATTTGACTTTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR CCA 90 bp | AACCCATTCTCGCTAGTTACAACACACTGCCAAGAGCCATCTCTTTaGTGTAAGGGGAAGATCAAAATGCATACGAACATGTCCTACTCA | + |
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Preference number: 1 (lower is better) Translates to: NPFSLVTTHCQEPSL*CKGKIKMHTNMSYS Trigger: TGAGTAGGACATGTTCGTATGCATTTTGATCTTCCCCTTACACCAAAGAGATGGCTCTTGGCAGTGTGTTGTAACTAGCGAGAATGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR TCA 90 bp | TCACCAACTATTCTCTGCTCATTGTATCCTCCAGGTCTGGGTTCGTaGACAGCCATCCTATTTAAAAGTCAGCCATTGTTTAGGGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: SPTILCSLYPPGLGS*TAILFKSQPLFRVF Trigger: GAAAACCCTAAACAATGGCTGACTTTTAAATAGGATGGCTGTTCACGAACCCAGACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| 3UTR TCA 90 bp | GGCTCACTCAACTTTGGTACTTTCTGTTCTAATATACAGAGAGCTTaGTCAGCTATGATCAACAGAAATAGCTTTAGTTTAGCAAACCTT | + |
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Preference number: 1 (lower is better) Translates to: GSLNFGTFCSNIQRA*SAMINRNSFSLANL Trigger: AAGGTTTGCTAAACTAAAGCTATTTCTGTTGATCATAGCTGATCAAGCTCTCTGTATATTAGAACAGAAAGTACCAAAGTTGAGTGAGCC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR GCA 90 bp | TATGCATGGTGTTCCCATCTAAAGGTGGTGTTTGCTGTATTTAAATaGCTTGGTCTGAGTAACTGTCGTGATTTATATGATAAAAACACT | + |
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Preference number: 1 (lower is better) Translates to: YAWCSHLKVVFAVFK*LGLSNCRDLYDKNT Trigger: AGTGTTTTTATCATATAAATCACGACAGTTACTCAGACCAAGGCATTTAAATACAGCAAACACCACCTTTAGATGGGAACACCATGCATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR-3UTR TCA 90 bp | GCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGAGAGAAGGTATGTCATGTGCCATaGGAATCCGATCTTCATAGC | + |
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Preference number: 2 (lower is better) Translates to: APTRDVPVVVIQLLIGEKVCHVP*ESDLHS Trigger: GCTATGAAGATCGGATTCTCATGGCACATGACATAC...CTTCTCTCCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| 3UTR-3UTR TCA 90 bp | TCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAAATGATTCTCTCATAGGAGAGAAGTaGCCATTCACCAGTTCTATG | + |
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Preference number: 2 (lower is better) Translates to: SSSADHRVRVGEDIQNDSLIGEK*PFTSSM Trigger: CATAGAACTGGTGAATGGTCACTTCTCTCCTATGAG...AGAATCATTTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| 3UTR-3UTR GCA 90 bp | TCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAAATGATTCTTGTGTGTATGTCATGTaGCATGAGAATCCGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: SSSADHRVRVGEDIQNDSCVYVM*HENPIF Trigger: GAAGATCGGATTCTCATGGCACATGACATACACACA...AGAATCATTTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| 3UTR-3UTR GCA 90 bp | AAACACTTTCATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGTCACCAACTATTCTCTaGTCATTGTATCCTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: KHFHFSQVVQITESGLGKSPTIL*SLYPPG Trigger: ACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGA...CTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATGAAAGTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGATGGAGGCTTTTGCCTTCTTTGGAACAAAAGATCGTTCATAACCTAAGGTCCAAGAGTTATGCATaGTGTTCCCATCTAAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: VRWRLLPSLEQKIVHNLRSKSYA*CSHLKV Trigger: CACCTTTAGATGGGAACACCATGCATAACTCTTGGA...CCTTAGGTTATGAACGATCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR CAA 90 bp | CAGTCAGAGAAATTTATTCTTTGGTATGAAGTCAGATGGAGGCTTTaGCCTTCTTTGGAACAAAAGATCGTTCATAACCTAAGGCACAAA | + |
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Preference number: 2 (lower is better) Translates to: QSEKFILWYEVRWRL*PSLEQKIVHNLRHK Trigger: TTTGTGCCTTAGGTTATGAACGATCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGACTTCATACCAAAGAATAAATTTCTCTGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTCCACTAAGCACAGTGGCTGTACAGCTCAAAAATGAATTTAAAAAGTATTCACCAACTATTCTCTaGTCATTGTATCCTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: FSPLSTVAVQLKNEFKKYSPTIL*SLYPPG Trigger: ACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGA...ATACTTTTTAAATTCATTTTTGAGCTGTACAGCCACTGTGCTTAGTGGACTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAAATTTATTCTTTGGTATGAAGTCAGATGGAGGCTTTTGCCTTCTTTGGAACTTTTCCAAGAGTTATaGATGGTGTTCCCATCTAAA | + |
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Preference number: 2 (lower is better) Translates to: EKFILWYEVRWRLLPSLELFQEL*MVFPSK Trigger: TTTAGATGGGAACACCATGCATAACTCTTGGAAAAG...TTCCAAAGAAGGCAAAAGCCTCCATCTGACTTCATACCAAAGAATAAATTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR-3UTR GCA 90 bp | TTATTCTTTGGTATGAAGTCAGATGGAGGCTTTTGCCTTCTTTGGAACAAAAGATTTGCTGTATTTAAATaGCTTGGTCTGAGTAACTGT | + |
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Preference number: 2 (lower is better) Translates to: LFFGMKSDGGFCLLWNKRFAVFK*LGLSNC Trigger: ACAGTTACTCAGACCAAGGCATTTAAATACAGCAAA...TCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGACTTCATACCAAAGAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR-3UTR CAA 90 bp | CCCTGTGGCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGACTATTCTCTGCTCATaGTATCCTCCAGGTCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: PCGPHQRCPCGSYPASHRTILCS*YPPGLG Trigger: ACCCAGACCTGGAGGATACAATGAGCAGAGAATAGT...CCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGCCACAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| 3UTR GCA 72 bp | TGTAGTGCGAACCCATTCTCGCTAGTTACAACACACTaGCAAGAGCCATCTCTTTGGTGTAAGGGGAAGATC | + |
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Preference number: 3 (lower is better) Translates to: CSANPFSLVTTH*QEPSLWCKGKI Trigger: GATCTTCCCCTTACACCAAAGAGATGGCTCTTGGCAGTGTGTTGTAACTAGCGAGAATGGGTTCGCACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR TCA 72 bp | AAGGAGCATCTTAGGAACAATGTTGGTAAGGATGTGTaGGTAGCCGTGACCTCCGTACTTCATCAACCGATG | + |
|
Preference number: 3 (lower is better) Translates to: KEHLRNNVGKDV*VAVTSVLHQPM Trigger: CATCGGTTGATGAAGTACGGAGGTCACGGCTACTCACACATCCTTACCAACATTGTTCCTAAGATGCTCCTT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| 3UTR-3UTR CAA 90 bp | GCATTCTTTGGCAGACGACTATTACAGGACTTTAGGAAGCAAGTAGCTCTCTCTATCACAGAGTCAGGGTaGGGGAAGACATCCAAAATG | + |
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Preference number: 3 (lower is better) Translates to: AFFGRRLLQDFRKQVALSITESG*GKTSKM Trigger: CATTTTGGATGTCTTCCCCAACCCTGACTCTGTGAT...AGAGAGAGCTACTTGCTTCCTAAAGTCCTGTAATAGTCGTCTGCCAAAGAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR TCA 72 bp | CAAATCACAGTAGATTCCAGTGCCCTATGTCACACATaGGACCTAGTTGATCCCATGGTAACTGTGTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: QITVDSSALCHT*DLVDPMVTVFH Trigger: GTGGAACACAGTTACCATGGGATCAACTAGGTCTCATGTGTGACATAGGGCACTGGAATCTACTGTGATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR CCA 72 bp | CACCAACTATTCTCTGCTCATTGTATCCTCCAGGTCTaGGTTCGTGAACAGCCATCCTATTTAAAAGTCAGC | + |
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Preference number: 3 (lower is better) Translates to: HQLFSAHCILQV*VREQPSYLKVS Trigger: GCTGACTTTTAAATAGGATGGCTGTTCACGAACCCAGACCTGGAGGATACAATGAGCAGAGAATAGTTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| 3UTR GCA 72 bp | AAGAGCCATCTCTTTGGTGTAAGGGGAAGATCAAAATaGATACGAACATGTCCTACTCACACACAATTCCCC | + |
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Preference number: 3 (lower is better) Translates to: KSHLFGVRGRSK*IRTCPTHTQFP Trigger: GGGGAATTGTGTGTGAGTAGGACATGTTCGTATGCATTTTGATCTTCCCCTTACACCAAAGAGATGGCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR CCA 72 bp | TCGCTAGTTACAACACACTGCCAAGAGCCATCTCTTTaGTGTAAGGGGAAGATCAAAATGCATACGAACATG | + |
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Preference number: 3 (lower is better) Translates to: SLVTTHCQEPSL*CKGKIKMHTNM Trigger: CATGTTCGTATGCATTTTGATCTTCCCCTTACACCAAAGAGATGGCTCTTGGCAGTGTGTTGTAACTAGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR TCA 72 bp | ATTCTCTGCTCATTGTATCCTCCAGGTCTGGGTTCGTaGACAGCCATCCTATTTAAAAGTCAGCCATTGTTT | + |
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Preference number: 3 (lower is better) Translates to: ILCSLYPPGLGS*TAILFKSQPLF Trigger: AAACAATGGCTGACTTTTAAATAGGATGGCTGTTCACGAACCCAGACCTGGAGGATACAATGAGCAGAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| 3UTR TCA 72 bp | AAGATCGTTCATAACCTAAGGCACAAAAGTTTAACTTaGGCTACTGCATGCGTCACCAAGGGGACACTAAGT | + |
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Preference number: 3 (lower is better) Translates to: KIVHNLRHKSLT*ATACVTKGTLS Trigger: ACTTAGTGTCCCCTTGGTGACGCATGCAGTAGCTCAAGTTAAACTTTTGTGCCTTAGGTTATGAACGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR CCA 72 bp | CTTATGGATTGCAAGCAAGGGATTAAAGATTTGTCTTaGGTACCAAATCACATAACGAGGATTCAAAGGATT | + |
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Preference number: 3 (lower is better) Translates to: LMDCKQGIKDLS*VPNHITRIQRI Trigger: AATCCTTTGAATCCTCGTTATGTGATTTGGTACCCAAGACAAATCTTTAATCCCTTGCTTGCAATCCATAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | CCCTGTGGCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGGACTCCAGTCTGCTCTaGCAGCCACTTCAGCGTATG | + |
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Preference number: 4 (lower is better) Translates to: PCGPHQRCPCGSYPASHRDSSLL*QPLQRM Trigger: CATACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTC...CCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGCCACAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | TGGGACTCACTTGAGCCCTGTGGCCCCCACCAGAGATGTCCCTGTGGTAGTTATATGTGGACTCCAGTCTaGTCTGCCAGCCACTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: WDSLEPCGPHQRCPCGSYMWTPV*SASHFS Trigger: GCTGAAGTGGCTGGCAGAGCAGACTGGAGTCCACAT...ATAACTACCACAGGGACATCTCTGGTGGGGGCCACAGGGCTCAAGTGAGTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | CCCTGTGGCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGGCTGCTCCACTGACATaGCTCTGGTTGCTGCAGAGT | + |
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Preference number: 4 (lower is better) Translates to: PCGPHQRCPCGSYPASHRAAPLT*LWLLQS Trigger: ACTCTGCAGCAACCAGAGCCATGTCAGTGGAGCAGC...CCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGCCACAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | TGGGACTCACTTGAGCCCTGTGGCCCCCACCAGAGATGTCCCTGTGGTAGTTATGGGTTCCGTCCAGGATaGATGATGACAGGACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WDSLEPCGPHQRCPCGSYGFRPG*MMTGQP Trigger: TGGCTGTCCTGTCATCATCCATCCTGGACGGAACCC...ATAACTACCACAGGGACATCTCTGGTGGGGGCCACAGGGCTCAAGTGAGTCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR TCA 90 bp | GCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGAGAGAAGACCCAGCTCCAGCTATaGTGTGGACTCCAGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: APTRDVPVVVIQLLIGEKTQLQL*CGLQSA Trigger: AGCAGACTGGAGTCCACATCATAGCTGGAGCTGGGT...CTTCTCTCCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | TTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAAATGATGCTCGTGGGTCAGGGTaGGTCCCAGTTGGCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: FSSSADHRVRVGEDIQNDARGSG*VPVGWV Trigger: AACCCAGCCAACTGGGACGCACCCTGACCCACGAGC...ATCATTTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | GCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGAGAGAAGGTGGCATGGAGGAGGTaGGCAGTAAAAACTGTCAAA | + |
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Preference number: 4 (lower is better) Translates to: APTRDVPVVVIQLLIGEKVAWRR*AVKTVK Trigger: TTTGACAGTTTTTACTGCCCACCTCCTCCATGCCAC...CTTCTCTCCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | CCTAAGGCACAAAAGTTTAACTTGAGCTACTGCATGCGTCACCAAGGGGACACTGATTATCTGGAATGGTaGACCTGGGTTCCGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PKAQKFNLSYCMRHQGDTDYLEW*TWVPSR Trigger: CCTGGACGGAACCCAGGTGCACCATTCCAGATAATC...AGTGTCCCCTTGGTGACGCATGCAGTAGCTCAAGTTAAACTTTTGTGCCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | CCTAAGGCACAAAAGTTTAACTTGAGCTACTGCATGCGTCACCAAGGGGACACTCCACTGACATGGCTCTaGTTGCTGCAGAGTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: PKAQKFNLSYCMRHQGDTPLTWL*LLQSEL Trigger: CAACTCACTCTGCAGCAACCAGAGCCATGTCAGTGG...AGTGTCCCCTTGGTGACGCATGCAGTAGCTCAAGTTAAACTTTTGTGCCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | TCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTGTATCCTCCAGGTCTAGGGTGCGTCCCAGTTaGCTGGGTTCTACAAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSRFEITNYSLLIVSSRSRVRPS*LGSTRP Trigger: GGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCT...AGACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | TCCGTACTTCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATGAGAATCCGCCACTGACATGGCTCTaGTTGCTGCAGAGTGAGTTG | + |
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Preference number: 4 (lower is better) Translates to: SVLHQPMLCVYVMCHENPPLTWL*LLQSEL Trigger: CAACTCACTCTGCAGCAACCAGAGCCATGTCAGTGG...CGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGAAGTACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| CDS-3UTR CCA 90 bp | CATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAAGGGTTCCGTCCAGGATaGATGATGACAGGACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: HFSQVVQITESGLGKTSKGFRPG*MMTGQP Trigger: TGGCTGTCCTGTCATCATCCATCCTGGACGGAACCC...TTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | GACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTGCTCGTGGGTCAGGGTaGGTCCCAGTTGGCTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: DWINVSSRFEITNYSLLIARGSG*VPVGWV Trigger: AACCCAGCCAACTGGGACGCACCCTGACCCACGAGC...AATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | GAAACACTTTCATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACTCCAGTCTGCTCTaGCAGCCACTTCAGCGTATG | + |
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Preference number: 4 (lower is better) Translates to: ETLSFFSSSADHRVRVGEDSSLL*QPLQRM Trigger: CATACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTC...TTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATGAAAGTGTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | CTTCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATGAGAATCCGATCTTCGATTATCTGGAATGGTaGACCTGGGTTCCGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LHQPMLCVYVMCHENPIFDYLEW*TWVPSR Trigger: CCTGGACGGAACCCAGGTGCACCATTCCAGATAATC...GAAGATCGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| CDS-3UTR CCA 90 bp | TCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAAATGATTCTGGTGACTTCGTGGCATaGAGGAGGTGGGCAGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: SSSADHRVRVGEDIQNDSGDFVA*RRWAVK Trigger: TTTTACTGCCCACCTCCTCCATGCCACGAAGTCACC...AGAATCATTTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | AGCCATTGTTTAGGGTTTTCTATGAGTATCTTGTCAAGCACCCTCTCAGTCAGACTGGAATGGTGCACCTaGGTTCCGTCCAGGATGGAT | + |
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Preference number: 4 (lower is better) Translates to: SHCLGFSMSILSSTLSVRLEWCT*VPSRMD Trigger: ATCCATCCTGGACGGAACCCAGGTGCACCATTCCAG...TCTGACTGAGAGGGTGCTTGACAAGATACTCATAGAAAACCCTAAACAATGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| CDS-3UTR TCA 90 bp | TCTCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTGTATCCTCCAGGTACCCAGCTCCAGCTATaGTGTGGACTCCAGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPVDLKSPTILCSLYPPGTQLQL*CGLQSA Trigger: AGCAGACTGGAGTCCACATCATAGCTGGAGCTGGGT...ACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR TCA 90 bp | TCCGTACTTCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATGAGAATCCGTGTCAAGGTGGGACATaGCTGTTTTGGAGATGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SVLHQPMLCVYVMCHENPCQGGT*LFWRCL Trigger: CAGACATCTCCAAAACAGTCATGTCCCACCTTGACA...CGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGAAGTACGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| CDS-3UTR CCA 90 bp | TCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTGTATCCTCCAGGTCTTGCGTCCCAGTTGGCTaGGTTCTACAAGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSRFEITNYSLLIVSSRSCVPVG*VLQGPE Trigger: TTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCA...AGACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTGTATCCTCCAGGTTGCGTCCCAGTTGGCTaGGTTCTACAAGGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPVDLKSPTILCSLYPPGCVPVG*VLQGPE Trigger: TTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCA...ACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CCA 90 bp | ACCATTCACCAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCAGGGTGCGTCCCAGTTaGCTGGGTTCTACAAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TIHQFYVDWINVSSRFEIRVRPS*LGSTRP Trigger: GGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCT...GATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTGGTGAATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGATGGAGGCTTTTGCCTTCTTTGGAACAAAAGATCGTTCATAACCTAAGGAGGACATCTGTAAGCTaGTCCACTGACATGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VRWRLLPSLEQKIVHNLRRTSVS*STDMAL Trigger: CAGAGCCATGTCAGTGGAGCAGCTTACAGATGTCCT...CCTTAGGTTATGAACGATCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR CAA 72 bp | ATATTTATTTTATTAAGGAAAGACAATGGGACTCACTaGAGCCCTGTGGCCCCCACCAGAGATGTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFILLRKDNGTH*SPVAPTRDVPV Trigger: CACAGGGACATCTCTGGTGGGGGCCACAGGGCTCAAGTGAGTCCCATTGTCTTTCCTTAATAAAATAAATAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR TCA 90 bp | AAACACTTTCATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGTGTCAAGGTGGGACATaGCTGTTTTGGAGATGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KHFHFSQVVQITESGLGKCQGGT*LFWRCL Trigger: CAGACATCTCCAAAACAGTCATGTCCCACCTTGACA...CTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATGAAAGTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAATTTATTCTTTGGTATGAAGTCAGATGGAGGCTTTTGCCTTCTTTGGAAGCTGCTCCACTGACATaGCTCTGGTTGCTGCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKFILWYEVRWRLLPSLEAAPLT*LWLLQS Trigger: ACTCTGCAGCAACCAGAGCCATGTCAGTGGAGCAGC...TTCCAAAGAAGGCAAAAGCCTCCATCTGACTTCATACCAAAGAATAAATTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
||
| CDS-3UTR GCA 90 bp | TTCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATGAGAATCCGATCTTCATGCTGCAGAGTGAGTTaGATCAACATAAAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FINRCFVCMSCAMRIRSSCCRVS*INIKPS Trigger: GCTGGGTTTTATGTTGATGCAACTCACTCTGCAGCA...TGAAGATCGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
||
| CDS-3UTR GCA 90 bp | GAAACACTTTCATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAATCTGCTCCTGCTTCTTaGAGTATACGGATTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETLSFFSSSADHRVRVGESAPAS*SIRIIW Trigger: CCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGA...TTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATGAAAGTGTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTGTATCCTCCAGGTGGAGATGTCTGCTCCTaGTTCTTGCAGTATACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPVDLKSPTILCSLYPPGGDVCS*FLQYTD Trigger: ATCCGTATACTGCAAGAAGCAGGAGCAGACATCTCC...ACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATCTGGAATGGTGCACCTaGGTTCCGTCCAGGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QFYVDWINVSSRFEITNYLEWCT*VPSRMD Trigger: ATCCATCCTGGACGGAACCCAGGTGCACCATTCCAG...ATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CCA 90 bp | GTCAGATGGAGGCTTTTGCCTTCTTTGGAACAAAAGATCGTTCATAACCTAAGGATAGTCCTGTCAAGGTaGGACATGACTGTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VRWRLLPSLEQKIVHNLRIVLSR*DMTVLE Trigger: CTCCAAAACAGTCATGTCCCACCTTGACAGGACTAT...CCTTAGGTTATGAACGATCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
||
| CDS-3UTR GCA 90 bp | GACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTAGGACATCTGTAAGCTaGTCCACTGACATGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DWINVSSRFEITNYSLLIRTSVS*STDMAL Trigger: CAGAGCCATGTCAGTGGAGCAGCTTACAGATGTCCT...AATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTGTATCCTCCAGGTCTTCTGCTCCTGCTTCTTaGAGTATACGGATTATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSRFEITNYSLLIVSSRSSAPAS*SIRIIW Trigger: CCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGA...AGACCTGGAGGATACAATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATGGTGACTTCGTGGCATaGAGGAGGTGGGCAGTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QFYVDWINVSSRFEITNYGDFVA*RRWAVK Trigger: TTTTACTGCCCACCTCCTCCATGCCACGAAGTCACC...ATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGTGACCATTCACCAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGAACAGCTCTTCTCTTATaGCTCCTACCTCCTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: REVTIHQFYVDWINVSSRTALLL*LLPPDS Trigger: TGAATCAGGAGGTAGGAGCCATAAGAGAAGAGCTGT...TCTACTGGAGACATTAATCCAGTCTACATAGAACTGGTGAATGGTCACTTCTCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTTATTCTTTGGTATGAAGTCAGATGGAGGCTTTTGCCTTCTTTGGAAGGAGATGTCTGCTCCTaGTTCTTGCAGTATACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKFILWYEVRWRLLPSLEGDVCS*FLQYTD Trigger: ATCCGTATACTGCAAGAAGCAGGAGCAGACATCTCC...TTCCAAAGAAGGCAAAAGCCTCCATCTGACTTCATACCAAAGAATAAATTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
||
| CDS-3UTR CCA 90 bp | GACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATTCTCTGCTCATTATAGTCCTGTCAAGGTaGGACATGACTGTTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DWINVSSRFEITNYSLLIIVLSR*DMTVLE Trigger: CTCCAAAACAGTCATGTCCCACCTTGACAGGACTAT...AATGAGCAGAGAATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATGTATGTCATGTGCCATaGGAATCCGATCTTCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFYVDWINVSSRFEITNYVCHVP*ESDLHS Trigger: GCTATGAAGATCGGATTCTCATGGCACATGACATAC...ATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | CAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATTGCTGCAGAGTGAGTTaGATCAACATAAAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QFYVDWINVSSRFEITNYCCRVS*INIKPS Trigger: GCTGGGTTTTATGTTGATGCAACTCACTCTGCAGCA...ATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATACAGCTCTTCTCTTATaGCTCCTACCTCCTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: QFYVDWINVSSRFEITNYTALLL*LLPPDS Trigger: TGAATCAGGAGGTAGGAGCCATAAGAGAAGAGCTGT...ATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR GCA 90 bp | TTCAGTCCACTAAGCACAGTGGCTGTACAGCTCAAAAATGAATTTAAAAAGTATTGTGTGTATGTCATGTaGCATGAGAATCCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSPLSTVAVQLKNEFKKYCVYVM*HENPIF Trigger: GAAGATCGGATTCTCATGGCACATGACATACACACA...ATACTTTTTAAATTCATTTTTGAGCTGTACAGCCACTGTGCTTAGTGGACTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| 3UTR CAA 72 bp | AAATTTATTCTTTGGTATGAAGTCAGATGGAGGCTTTaGCCTTCTTTGGAACAAAAGATCGTTCATAACCTA | + |
|
Preference number: 4 (lower is better) Translates to: KFILWYEVRWRL*PSLEQKIVHNL Trigger: TAGGTTATGAACGATCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGACTTCATACCAAAGAATAAATTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CCA 90 bp | CAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATTCATCCACTAGAAAATaGACCCTTCTAATTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QFYVDWINVSSRFEITNYSSTRK*TLLILL Trigger: CAAAAGAATTAGAAGGGTCCATTTTCTAGTGGATGA...ATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | GCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGAGAGAAGCAGGGTGCGTCCCAGTaGGCTGGGTTCTACAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: APTRDVPVVVIQLLIGEKQGASQ*AGFYKA Trigger: GGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTG...CTTCTCTCCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS GCA 90 bp | AACATAAAACCCAGCTCCAGCTATGATGTGGACTCCAGTCTGCTCTaGCAGCCACTTCAGCGTATGCACGTCCCTGCTGAGCCCAGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NIKPSSSYDVDSSLL*QPLQRMHVPAEPSC Trigger: ACAACTGGGCTCAGCAGGGACGTGCATACGCTGAAGTGGCTGGCAGAGCAGACTGGAGTCCACATCATAGCTGGAGCTGGGTTTTATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 90 bp | AGGTCATTGTCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTTGGCTaGGTTCTACAAGGCCCAGAACTGTTTGTACTTTCCCACTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLSDARGSGCVPVG*VLQGPELFVLSHLR Trigger: CCTTAAGTGGGAAAGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAATGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 90 bp | TGCTCCTGCTTCTTGCAGTATACGGATTATCTGGAATGGTGCACCTaGGTTCCGTCCAGGATGGATGATGACAGGACAGCCAAGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSCFLQYTDYLEWCT*VPSRMDDDRTAKLS Trigger: GCTCAGCTTGGCTGTCCTGTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 90 bp | GGAGATGTCTGCTCCTGCTTCTTGCAGTATACGGATTATCTGGAATaGTGCACCTGGGTTCCGTCCAGGATGGATGATGACAGGACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GDVCSCFLQYTDYLE*CTWVPSRMDDDRTA Trigger: GGCTGTCCTGTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGACATCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS-3UTR CAA 90 bp | TGGGACTCACTTGAGCCCTGTGGCCCCCACCAGAGATGTCCCTGTGGTAGTTATAACTGTCAAAGGTCATaGTCAGATGCTCGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: WDSLEPCGPHQRCPCGSYNCQRS*SDARGS Trigger: TGACCCACGAGCATCTGACAATGACCTTTGACAGTT...ATAACTACCACAGGGACATCTCTGGTGGGGGCCACAGGGCTCAAGTGAGTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS GCA 90 bp | GATGTCTGCTCCTGCTTCTTGCAGTATACGGATTATCTGGAATGGTaGACCTGGGTTCCGTCCAGGATGGATGATGACAGGACAGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: DVCSCFLQYTDYLEW*TWVPSRMDDDRTAK Trigger: CTTGGCTGTCCTGTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 90 bp | TCAAAGGTCATTGTCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTTaGCTGGGTTCTACAAGGCCCAGAACTGTTTGTACTTTCCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: SKVIVRCSWVRVRPS*LGSTRPRTVCTFPL Trigger: AAGTGGGAAAGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAATGACCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS-3UTR CAA 90 bp | TGGGACTCACTTGAGCCCTGTGGCCCCCACCAGAGATGTCCCTGTGGTAGTTATTTGCTGCAGAGTGAGTaGCATCAACATAAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WDSLEPCGPHQRCPCGSYLLQSE*HQHKTQ Trigger: CTGGGTTTTATGTTGATGCAACTCACTCTGCAGCAA...ATAACTACCACAGGGACATCTCTGGTGGGGGCCACAGGGCTCAAGTGAGTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | GCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGAGAGAAGCCAATAACTCCACACTaGATGCTGGTGCCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: APTRDVPVVVIQLLIGEKPITPH*MLVPSA Trigger: AGCTGATGGCACCAGCATCAAGTGTGGAGTTATTGG...CTTCTCTCCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS GCA 90 bp | AGTAAAAACTGTCAAAGGTCATTGTCAGATGCTCGTGGGTCAGGGTaGGTCCCAGTTGGCTGGGTTCTACAAGGCCCAGAACTGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SKNCQRSLSDARGSG*VPVGWVLQGPELFV Trigger: TACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAATGACCTTTGACAGTTTTTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 90 bp | GTTTTGGAGATGTCTGCTCCTGCTTCTTGCAGTATACGGATTATCTaGAATGGTGCACCTGGGTTCCGTCCAGGATGGATGATGACAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLEMSAPASCSIRII*NGAPGFRPGWMMTG Trigger: TCCTGTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGACATCTCCAAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS-3UTR CAA 90 bp | GCCCCCACCAGAGATGTCCCTGTGGTAGTTATCCAGCTTCTCATAGGAGAGAAGTTGCTGCAGAGTGAGTaGCATCAACATAAAACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: APTRDVPVVVIQLLIGEKLLQSE*HQHKTQ Trigger: CTGGGTTTTATGTTGATGCAACTCACTCTGCAGCAA...CTTCTCTCCTATGAGAAGCTGGATAACTACCACAGGGACATCTCTGGTGGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CAA 90 bp | TCCGTACTTCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATGAGAATCCGCTGACATGGCTCTGGTaGCTGCAGAGTGAGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SVLHQPMLCVYVMCHENPLTWLW*LQSELH Trigger: ATGCAACTCACTCTGCAGCAACCAGAGCCATGTCAG...CGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGAAGTACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
||
| CDS-3UTR CAA 90 bp | ACCATTCACCAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCCAGGGTGCGTCCCAGTaGGCTGGGTTCTACAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TIHQFYVDWINVSSRFEIQGASQ*AGFYKA Trigger: GGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTG...GATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTGGTGAATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS TCA 90 bp | CTCCGTACTTCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATaGGAATCCGATCTTCATAGCCCTCATCCACTAGAAAATGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: LRTSSTDALCVCHVP*ESDLHSPHPLENGP Trigger: GGGTCCATTTTCTAGTGGATGAGGGCTATGAAGATCGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGAAGTACGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
||
| CDS-3UTR CAA 90 bp | TCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAAATGATTCTCCTCCGCCCTTAGCCTaGAAATACAACAGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSADHRVRVGEDIQNDSPPPLA*KYNSSS Trigger: AGAAGAGCTGTTGTATTTCAAGGCTAAGGGCGGAGG...AGAATCATTTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CAA 90 bp | CATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAACCTCCGCCCTTAGCCTaGAAATACAACAGCTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HFSQVVQITESGLGKTSKPPPLA*KYNSSS Trigger: AGAAGAGCTGTTGTATTTCAAGGCTAAGGGCGGAGG...TTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGACATCCAAAATGATAACTGTCAAAGGTCATaGTCAGATGCTCGTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSSSADHRVRVGEDIQNDNCQRS*SDARGS Trigger: TGACCCACGAGCATCTGACAATGACCTTTGACAGTT...ATCATTTTGGATGTCTTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
||
| CDS-3UTR CAA 90 bp | GTCAGATGGAGGCTTTTGCCTTCTTTGGAACAAAAGATCGTTCATAACCTAAGGCCAATAACTCCACACTaGATGCTGGTGCCATCAGCT | + |
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Preference number: 5 (lower is better) Translates to: VRWRLLPSLEQKIVHNLRPITPH*MLVPSA Trigger: AGCTGATGGCACCAGCATCAAGTGTGGAGTTATTGG...CCTTAGGTTATGAACGATCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | GTCAGATGGAGGCTTTTGCCTTCTTTGGAACAAAAGATCGTTCATAACCTAAGGTGGGACATGACTGTTTaGGAGATGTCTGCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VRWRLLPSLEQKIVHNLRWDMTV*EMSAPA Trigger: AGCAGGAGCAGACATCTCCAAAACAGTCATGTCCCA...CCTTAGGTTATGAACGATCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | GAAACACTTTCATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAATCATGATAGGTTCCTaGGAGGTGACTTCGTGGCAT | + |
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Preference number: 5 (lower is better) Translates to: ETLSFFSSSADHRVRVGEIMIGS*EVTSWH Trigger: ATGCCACGAAGTCACCTCCAAGGAACCTATCATGAT...TTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATGAAAGTGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | AAGGTGGTGTTTGCTGTATTTAAATGCCTTGGTCTGAGTAACTGTCGTGATTTACTGACATGGCTCTGGTaGCTGCAGAGTGAGTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: KVVFAVFKCLGLSNCRDLLTWLW*LQSELH Trigger: ATGCAACTCACTCTGCAGCAACCAGAGCCATGTCAG...TAAATCACGACAGTTACTCAGACCAAGGCATTTAAATACAGCAAACACCACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | TTCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATGAGAATCCGATCTTCAGTCTGCTCCTGCTTCTaGCAGTATACGGATTATCTG | + |
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Preference number: 5 (lower is better) Translates to: FINRCFVCMSCAMRIRSSVCSCF*QYTDYL Trigger: CAGATAATCCGTATACTGCAAGAAGCAGGAGCAGAC...TGAAGATCGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| CDS-3UTR CAA 90 bp | GAAACACTTTCATTTTTCTCAAGTAGTGCAGATCACAGAGTCAGGGTTGGGGAAGTCTGCTCCTGCTTCTaGCAGTATACGGATTATCTG | + |
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Preference number: 5 (lower is better) Translates to: ETLSFFSSSADHRVRVGEVCSCF*QYTDYL Trigger: CAGATAATCCGTATACTGCAAGAAGCAGGAGCAGAC...TTCCCCAACCCTGACTCTGTGATCTGCACTACTTGAGAAAAATGAAAGTGTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | AGAGAAGTGACCATTCACCAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATGGGACATGACTGTTTaGGAGATGTCTGCTCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: REVTIHQFYVDWINVSSRWDMTV*EMSAPA Trigger: AGCAGGAGCAGACATCTCCAAAACAGTCATGTCCCA...TCTACTGGAGACATTAATCCAGTCTACATAGAACTGGTGAATGGTCACTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | TTATTCTTTGGTATGAAGTCAGATGGAGGCTTTTGCCTTCTTTGGAACAAAAGACAAGTAGCAGCCAAGTaGAGCAAACTCCAGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: LFFGMKSDGGFCLLWNKRQVAAK*SKLQQL Trigger: GAGCTGCTGGAGTTTGCTCAACTTGGCTGCTACTTG...TCTTTTGTTCCAAAGAAGGCAAAAGCCTCCATCTGACTTCATACCAAAGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134794.8 |
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| CDS-3UTR CAA 90 bp | CAGTTCTATGTAGACTGGATTAATGTCTCCAGTAGATTTGAAATCACCAACTATCAAGTAGCAGCCAAGTaGAGCAAACTCCAGCAGCTC | + |
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Preference number: 5 (lower is better) Translates to: QFYVDWINVSSRFEITNYQVAAK*SKLQQL Trigger: GAGCTGCTGGAGTTTGCTCAACTTGGCTGCTACTTG...ATAGTTGGTGATTTCAAATCTACTGGAGACATTAATCCAGTCTACATAGAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 |
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| CDS TCA 72 bp | GCTCTGCCAGCCACTTCAGCGTATGCACGTCCCTGCTaGGCCCAGTTGTCGTATTCTCCACCAAGGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: ALPATSAYARPC*AQLSYSPPRLL Trigger: GAGGAGCCTTGGTGGAGAATACGACAACTGGGCTCAGCAGGGACGTGCATACGCTGAAGTGGCTGGCAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028063.7 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CAA 90 bp | CTTCGTGGCATGGAGGAGGTGGGCAGTAAAAACTGTCAAAGGTCATaGTCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTTGGCTGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LRGMEEVGSKNCQRS*SDARGSGCVPVGWV Trigger: AACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAATGACCTTTGACAGTTTTTACTGCCCACCTCCTCCATGCCACGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS GCA 72 bp | TGTCAAAGGTCATTGTCAGATGCTCGTGGGTCAGGGTaGGTCCCAGTTGGCTGGGTTCTACAAGGCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: CQRSLSDARGSG*VPVGWVLQGPE Trigger: TTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAATGACCTTTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 72 bp | TCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTTGGCTaGGTTCTACAAGGCCCAGAACTGTTTGTACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SDARGSGCVPVG*VLQGPELFVLS Trigger: GGAAAGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CAA 72 bp | CATTGTCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTaGGCTGGGTTCTACAAGGCCCAGAACTGTTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: HCQMLVGQGASQ*AGFYKAQNCLY Trigger: GTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 72 bp | ATTGTCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTTaGCTGGGTTCTACAAGGCCCAGAACTGTTTGTACT | + |
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Preference number: 6 (lower is better) Translates to: IVRCSWVRVRPS*LGSTRPRTVCT Trigger: AGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CAA 90 bp | GTCAAAGGTCATTGTCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTaGGCTGGGTTCTACAAGGCCCAGAACTGTTTGTACTTTCCCACT | + |
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Preference number: 6 (lower is better) Translates to: VKGHCQMLVGQGASQ*AGFYKAQNCLYFPT Trigger: AGTGGGAAAGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCCTGACCCACGAGCATCTGACAATGACCTTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CAA 72 bp | ATGGAGGAGGTGGGCAGTAAAAACTGTCAAAGGTCATaGTCAGATGCTCGTGGGTCAGGGTGCGTCCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: MEEVGSKNCQRS*SDARGSGCVPV Trigger: AACTGGGACGCACCCTGACCCACGAGCATCTGACAATGACCTTTGACAGTTTTTACTGCCCACCTCCTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS GCA 72 bp | TCCTGCTTCTTGCAGTATACGGATTATCTGGAATGGTaGACCTGGGTTCCGTCCAGGATGGATGATGACAGG | + |
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Preference number: 6 (lower is better) Translates to: SCFLQYTDYLEW*TWVPSRMDDDR Trigger: CCTGTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 72 bp | TTCTTGCAGTATACGGATTATCTGGAATGGTGCACCTaGGTTCCGTCCAGGATGGATGATGACAGGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: FLQYTDYLEWCT*VPSRMDDDRTA Trigger: GGCTGTCCTGTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 72 bp | TGCTCCTGCTTCTTGCAGTATACGGATTATCTGGAATaGTGCACCTGGGTTCCGTCCAGGATGGATGATGAC | + |
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Preference number: 6 (lower is better) Translates to: CSCFLQYTDYLE*CTWVPSRMDDD Trigger: GTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 72 bp | ATGTCTGCTCCTGCTTCTTGCAGTATACGGATTATCTaGAATGGTGCACCTGGGTTCCGTCCAGGATGGATG | + |
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Preference number: 6 (lower is better) Translates to: MSAPASCSIRII*NGAPGFRPGWM Trigger: CATCCATCCTGGACGGAACCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS GCA 72 bp | GACATGACTGTTTTGGAGATGTCTGCTCCTGCTTCTTaGAGTATACGGATTATCTGGAATGGTGCACCTGGG | + |
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Preference number: 6 (lower is better) Translates to: DMTVLEMSAPAS*SIRIIWNGAPG Trigger: CCCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGACATCTCCAAAACAGTCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 72 bp | CATCATGATAGGTTCCTTGGAGGTGACTTCGTGGCATaGAGGAGGTGGGCAGTAAAAACTGTCAAAGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HHDRFLGGDFVA*RRWAVKTVKGH Trigger: ATGACCTTTGACAGTTTTTACTGCCCACCTCCTCCATGCCACGAAGTCACCTCCAAGGAACCTATCATGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CAA 72 bp | GGACATGACTGTTTTGGAGATGTCTGCTCCTGCTTCTaGCAGTATACGGATTATCTGGAATGGTGCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GHDCFGDVCSCF*QYTDYLEWCTW Trigger: CCAGGTGCACCATTCCAGATAATCCGTATACTGCAAGAAGCAGGAGCAGACATCTCCAAAACAGTCATGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS TCA 72 bp | TCATCAACCGATGCTTTGTGTGTATGTCATGTGCCATaGGAATCCGATCTTCATAGCCCTCATCCACTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SSTDALCVCHVP*ESDLHSPHPLE Trigger: TTCTAGTGGATGAGGGCTATGAAGATCGGATTCTCATGGCACATGACATACACACAAAGCATCGGTTGATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CCA 72 bp | AGCAGCTCTTTCTTATCAAATATAGTCCTGTCAAGGTaGGACATGACTGTTTTGGAGATGTCTGCTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: SSSFLSNIVLSR*DMTVLEMSAPA Trigger: AGCAGGAGCAGACATCTCCAAAACAGTCATGTCCCACCTTGACAGGACTATATTTGATAAGAAAGAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000028063.7 ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CAA 90 bp | AAGGAGTTCCGTACCAAAGAGATCGTATTCCAAGTAGCAGCCAAGTaGAGCAAACTCCAGCAGCTCTTTCTTATCAAATATAGTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: KEFRTKEIVFQVAAK*SKLQQLFLIKYSPV Trigger: GACAGGACTATATTTGATAAGAAAGAGCTGCTGGAGTTTGCTCAACTTGGCTGCTACTTGGAATACGATCTCTTTGGTACGGAACTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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| CDS CAA 90 bp | CTAGAAAATGGACCCAAAGAGATCGTATTCCAAGTAGCAGCCAAGTaGAGCAAACTCCAGCAGCTCTTTCTTATCAAATATAGTCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LENGPKEIVFQVAAK*SKLQQLFLIKYSPV Trigger: GACAGGACTATATTTGATAAGAAAGAGCTGCTGGAGTTTGCTCAACTTGGCTGCTACTTGGAATACGATCTCTTTGGGTCCATTTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028063.7 |
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| CDS CAA 72 bp | CCCTCATCCACTAGAAAATGGACCCTTCTAATTCTTTaGTTATCATCAGGCATATCAATATCTGGGCTCAAC | + |
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Preference number: 6 (lower is better) Translates to: PSSTRKWTLLIL*LSSGISISGLN Trigger: GTTGAGCCCAGATATTGATATGCCTGATGATAACAAAAGAATTAGAAGGGTCCATTTTCTAGTGGATGAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000114796.9 ENSMUST00000134794.8 ENSMUST00000154269.7 |
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