Pregenerated sensors for PTEN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000013663Ensembl transcript IDs: ENSMUST00000013807.8
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCATCCTCACACCAACAATAAACATTCAAATAGGCCCAGAGAGCTaGCAAGGTCTCTCTATAATGCACATATCCCATACCTGCTACACT | + |
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Preference number: 1 (lower is better) Translates to: TILTPTINIQIGPES*QGLSIMHISHTCYT Trigger: AGTGTAGCAGGTATGGGATATGTGCATTATAGAGAGACCTTGTCAGCTCTCTGGGCCTATTTGAATGTTTATTGTTGGTGTGAGGATGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 90 bp | TTTAAGAATATTAGAAAGGAGATAGTATATTTGAGCCTACTACTCTaGACAAGTCCCGATGAAACCTCCCATGTGCTGATGGCCAACTGC | + |
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Preference number: 1 (lower is better) Translates to: FKNIRKEIVYLSLLL*TSPDETSHVLMANC Trigger: GCAGTTGGCCATCAGCACATGGGAGGTTTCATCGGGACTTGTCCAGAGTAGTAGGCTCAAATATACTATCTCCTTTCTAATATTCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 90 bp | CAAAGAATGGTGACGCTATTTAATTCAACTACCCTTTTACAATTATaGCAAAAATGTCCAAGAGGAATTACAGAGGACTTGGGATGTACG | + |
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Preference number: 1 (lower is better) Translates to: QRMVTLFNSTTLLQL*QKCPRGITEDLGCT Trigger: CGTACATCCCAAGTCCTCTGTAATTCCTCTTGGACATTTTTGCCATAATTGTAAAAGGGTAGTTGAATTAAATAGCGTCACCATTCTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 90 bp | CACTGTTTAAAGCTTGCTTACATCCTGATACCTGTTGTTGGAAGATaGGAAAGCAGCTATAGCGTATGCATAAAAACATATTCTAACAGT | + |
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Preference number: 1 (lower is better) Translates to: HCLKLAYILIPVVGR*ESSYSVCIKTYSNS Trigger: ACTGTTAGAATATGTTTTTATGCATACGCTATAGCTGCTTTCCCATCTTCCAACAACAGGTATCAGGATGTAAGCAAGCTTTAAACAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR TCA 90 bp | AGAATGCACTTCAGGCTAATCGTGAATACTGTCATAAAGAAAGTTTaGATTAGGACTCAAAACCCTTTCAGTCATAGCAATTCTTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: RMHFRLIVNTVIKKV*IRTQNPFSHSNSCQ Trigger: TTGACAAGAATTGCTATGACTGAAAGGGTTTTGAGTCCTAATTCAAACTTTCTTTATGACAGTATTCACGATTAGCCTGAAGTGCATTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CCA 90 bp | CACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAACGTCTGACAGCCACTaGACTGAGGACGCGCATCAT | + |
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Preference number: 2 (lower is better) Translates to: HISCCTSKSLRKHSRNTGTSDSH*TEDAHH Trigger: ATGATGCGCGTCCTCAGTCCAGTGGCTGTCAGACGT...TCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGCTTTGCATTTTAGTCAGCCACTTTCAGCTTTTAGGAAAGACAAGGGGCTGGCAGCCAGCACATaGAGCATCCACAGTAGGTAT | + |
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Preference number: 2 (lower is better) Translates to: TAALHFSQPLSAFRKDKGLAAST*SIHSRY Trigger: ATACCTACTGTGGATGCTTCATGTGCTGGCTGCCAG...CCCCTTGTCTTTCCTAAAAGCTGAAAGTGGCTGACTAAAATGCAAAGCAGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGCTGCTTTGCATTTTAGTCAGCCACTTTCAGCTTTTAGGAAAGACAAGGGGGTGCATCTAAGGAGCTaGAGATGGTGTATGGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: TAALHFSQPLSAFRKDKGVHLRS*RWCMVQ Trigger: CTGGACCATACACCATCTCCAGCTCCTTAGATGCAC...CCCCTTGTCTTTCCTAAAAGCTGAAAGTGGCTGACTAAAATGCAAAGCAGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 90 bp | AAAAACAGAAAGCCACAGAACAGACCTGAGACATCAAGCCCGTTCTaGGGGTTAGGGCTATCTTCAGACATCTGGCTTATAAGAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: KNRKPQNRPETSSPF*GLGLSSDIWLIRRE Trigger: TTCTCTTCTTATAAGCCAGATGTCTGAAGATAGCCCTAACCCCAAGAACGGGCTTGATGTCTCAGGTCTGTTCTGTGGCTTTCTGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR TCA 90 bp | CACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGATACAGATTTCCATGGTaGGATCTCAGGAAAAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: HISCCTSKSLRKHSRNTGYRFPW*DLRKSC Trigger: ACAACTTTTCCTGAGATCTCACCATGGAAATCTGTA...TCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR GCA 90 bp | CATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAGACATCAACAGCTGCTTTaGATTTTAGTCAGCCACTTT | + |
|
Preference number: 2 (lower is better) Translates to: HKLLHIQESKKAFQKHGRHQQLL*ILVSHF Trigger: AAAGTGGCTGACTAAAATGCAAAGCAGCTGTTGATG...TCTCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTTCAGACACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAATTCCCGAGGGGTTaGGAGGAGATCCTTTGTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SFQTHKLLHIQESKKAFQKFPRG*EEILCN Trigger: ATTACAAAGGATCTCCTCCCAACCCCTCGGGAATTT...CTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTGTCTGAAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 90 bp | CCATTACACTGTGTACAGATTTTAGGGACTGCTCTCTGTACCACATaGAACTGGGTACTCTTGTTTCTACTCAGCAACATTTCTCTCTAC | + |
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Preference number: 2 (lower is better) Translates to: PLHCVQILGTALCTT*NWVLLFLLSNISLY Trigger: GTAGAGAGAAATGTTGCTGAGTAGAAACAAGAGTACCCAGTTCAATGTGGTACAGAGAGCAGTCCCTAAAATCTGTACACAGTGTAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR TCA 90 bp | CATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAGAGGTCAAGATATAATTTaGAAGACACCAAATTCCCGA | + |
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Preference number: 2 (lower is better) Translates to: HKLLHIQESKKAFQKHGRGQDII*KTPNSR Trigger: TCGGGAATTTGGTGTCTTTCAAATTATATCTTGACC...TCTCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGCTGCTTTGCATTTTAGTCAGCCACTTTCAGCTTTTAGGAAAGACAAGGGGGCACCAATAAGTTATTaGAAATGGGACTTCACACCA | + |
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Preference number: 2 (lower is better) Translates to: TAALHFSQPLSAFRKDKGAPISY*KWDFTP Trigger: TGGTGTGAAGTCCCATTTTCAATAACTTATTGGTGC...CCCCTTGTCTTTCCTAAAAGCTGAAAGTGGCTGACTAAAATGCAAAGCAGCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR GCA 90 bp | CACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAAATCTAACAAAACCCTaGAGAAACTTCCTTAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: HISCCTSKSLRKHSRNTGNLTKP*RNFLSQ Trigger: TTGGCTAAGGAAGTTTCTGCAGGGTTTTGTTAGATT...TCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 90 bp | AAGGACTCCTTAGCCTTTAAGAATATTAGAAAGGAGATAGTATATTaGAGCCTACTACTCTGGACAAGTCCCGATGAAACCTCCCATGTG | + |
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Preference number: 2 (lower is better) Translates to: KDSLAFKNIRKEIVY*SLLLWTSPDETSHV Trigger: CACATGGGAGGTTTCATCGGGACTTGTCCAGAGTAGTAGGCTCAAATATACTATCTCCTTTCTAATATTCTTAAAGGCTAAGGAGTCCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR GCA 90 bp | CACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAATATGCTCTTTAAAATaGACAAACAAACAGCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: HISCCTSKSLRKHSRNTGICSLK*TNKQQD Trigger: GTCCTGCTGTTTGTTTGTGCATTTTAAAGAGCATAT...TCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR GCA 90 bp | CATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAGAACTGAAAAACTTCAATaGCTTATTATTCGTGCAGTG | + |
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Preference number: 2 (lower is better) Translates to: HKLLHIQESKKAFQKHGRTEKLQ*LIIRAV Trigger: CACTGCACGAATAATAAGGCATTGAAGTTTTTCAGT...TCTCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGCTGCTTTGCATTTTAGTCAGCCACTTTCAGCTTTTAGGAAAGACAAGGGGCCATCAAACTATAAATaGTTCTCTAGTGGGTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: TAALHFSQPLSAFRKDKGPSNYK*FSSGSY Trigger: ATAGGACCCACTAGAGAAGCATTTATAGTTTGATGG...CCCCTTGTCTTTCCTAAAAGCTGAAAGTGGCTGACTAAAATGCAAAGCAGCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTTCAGACACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGTCATTATTCATGACCTaGCCCTCTGTGTTACATATT | + |
|
Preference number: 2 (lower is better) Translates to: SFQTHKLLHIQESKKAFQSLFMT*PSVLHI Trigger: AATATGTAACACAGAGGGCCAGGTCATGAATAATGA...CTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTGTCTGAAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 90 bp | AGACAAGGGGGTGTACAGATTTCCATGGTGAGATCTCAGGAAAAGTaGTCTCTGACTTTATCAACAGTCAGTCAATATTCATGTATCAAT | + |
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Preference number: 2 (lower is better) Translates to: RQGGVQISMVRSQEK*SLTLSTVSQYSCIN Trigger: ATTGATACATGAATATTGACTGACTGTTGATAAAGTCAGAGACAACTTTTCCTGAGATCTCACCATGGAAATCTGTACACCCCCTTGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 90 bp | AGGAAAAATATTCTCCACAGGAAGGTATTTCTAGTCTTATGTCCATaGGTAGCCAAACGGAACTTCATAAAAACACTTCCACAACTCCAA | + |
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Preference number: 2 (lower is better) Translates to: RKNILHRKVFLVLCP*VAKRNFIKTLPQLQ Trigger: TTGGAGTTGTGGAAGTGTTTTTATGAAGTTCCGTTTGGCTACCAATGGACATAAGACTAGAAATACCTTCCTGTGGAGAATATTTTTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCTTAACCATGAGTAGACAGGTATGTGTCTACCAAGATGACAGAAAGATGGAAGTGACTCAACACTaGACATTTAAGAAGATCTAT | + |
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Preference number: 2 (lower is better) Translates to: LFLTMSRQVCVYQDDRKMEVTQH*TFKKIY Trigger: ATAGATCTTCTTAAATGTGCAGTGTTGAGTCACTTC...CATCTTTCTGTCATCTTGGTAGACACATACCTGTCTACTCATGGTTAAGAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | GAGGACTCAAAGGGTGACCAAATTCTCTACTCACAGTaGGTCACGCACCACGCTTCAAAGAGAAATACCCAC | + |
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Preference number: 3 (lower is better) Translates to: EDSKGDQILYSQ*VTHHASKRNTH Trigger: GTGGGTATTTCTCTTTGAAGCGTGGTGCGTGACGCACTGTGAGTAGAGAATTTGGTCACCCTTTGAGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | AGGGGGCAAGGTAGGTACGCATTTGCTGAGCAAGTTTaGAAAATGCAAGAGGACTCAAAGGGTGACCAAATT | + |
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Preference number: 3 (lower is better) Translates to: RGQGRYAFAEQV*KMQEDSKGDQI Trigger: AATTTGGTCACCCTTTGAGTCCTCTTGCATTTTGCAAACTTGCTCAGCAAATGCGTACCTACCTTGCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | GTAGACAGGTATGTGTCTACCAAGATGACAGAAAGATaGTTTGCTTGGAAGGATAGCAAGGAGGGGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: VDRYVSTKMTER*FAWKDSKEGEK Trigger: TTTTTCCCCCTCCTTGCTATCCTTCCAAGCAAAGCATCTTTCTGTCATCTTGGTAGACACATACCTGTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | GTGTGCACACACACACACACACACACACACACAATGTaGACACTTCCAAACTCAATAGAAAATGAGGACCAT | + |
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Preference number: 3 (lower is better) Translates to: VCTHTHTHTHTM*TLPNSIENEDH Trigger: ATGGTCCTCATTTTCTATTGAGTTTGGAAGTGTGCACATTGTGTGTGTGTGTGTGTGTGTGTGTGTGCACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 72 bp | TATGGCAAAAATGTCCAAGAGGAATTACAGAGGACTTaGGATGTACGGGGCCCAACTGTAAGCCTTCTTAAA | + |
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Preference number: 3 (lower is better) Translates to: YGKNVQEELQRT*DVRGPTVSLLK Trigger: TTTAAGAAGGCTTACAGTTGGGCCCCGTACATCCCAAGTCCTCTGTAATTCCTCTTGGACATTTTTGCCATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR TCA 72 bp | GAGCAACTACATTTAGAGTCAGAGGACTGTTACCGATaGCACTATCCTGCCATCTTCACACTGTTTAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: EQLHLESEDCYR*HYPAIFTLFKA Trigger: AGCTTTAAACAGTGTGAAGATGGCAGGATAGTGTCATCGGTAACAGTCCTCTGACTCTAAATGTAGTTGCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | GTGATGCCTTCAAGTCATTTCAGACACATAAGCTGCTaGACATCCAAGAGTCTAAGAAAGCATTCCAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: VMPSSHFRHISC*TSKSLRKHSRN Trigger: GTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTGTCTGAAATGACTTGAAGGCATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | AAGTGGTCCATTACACTGTGTACAGATTTTAGGGACTaGTCTCTGTACCACATTGAACTGGGTACTCTTGTT | + |
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Preference number: 3 (lower is better) Translates to: KWSITLCTDFRD*SLYHIELGTLV Trigger: AACAAGAGTACCCAGTTCAATGTGGTACAGAGAGCAGTCCCTAAAATCTGTACACAGTGTAATGGACCACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 72 bp | ATTAGAAAGGAGATAGTATATTTGAGCCTACTACTCTaGACAAGTCCCGATGAAACCTCCCATGTGCTGATG | + |
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Preference number: 3 (lower is better) Translates to: IRKEIVYLSLLL*TSPDETSHVLM Trigger: CATCAGCACATGGGAGGTTTCATCGGGACTTGTCCAGAGTAGTAGGCTCAAATATACTATCTCCTTTCTAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 72 bp | CAGATTTTAGGGACTGCTCTCTGTACCACATTGAACTaGGTACTCTTGTTTCTACTCAGCAACATTTCTCTC | + |
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Preference number: 3 (lower is better) Translates to: QILGTALCTTLN*VLLFLLSNISL Trigger: GAGAGAAATGTTGCTGAGTAGAAACAAGAGTACCCAGTTCAATGTGGTACAGAGAGCAGTCCCTAAAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTGCTTTGCATTTTAGTCAGCCACTTTCAGCTTTTAGGAAAGACAAGGGGAGCACCAATAAGTTATaGAAAATGGGACTTCACACC | + |
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Preference number: 3 (lower is better) Translates to: TAALHFSQPLSAFRKDKGSTNKL*KMGLHT Trigger: GGTGTGAAGTCCCATTTTCAATAACTTATTGGTGCT...CCCCTTGTCTTTCCTAAAAGCTGAAAGTGGCTGACTAAAATGCAAAGCAGCTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CAA 90 bp | CACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAAGATCTCAGGAAAAGTaGTCTCTGACTTTATCAACA | + |
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Preference number: 3 (lower is better) Translates to: HISCCTSKSLRKHSRNTGRSQEK*SLTLST Trigger: TGTTGATAAAGTCAGAGACAACTTTTCCTGAGATCT...TCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CAA 90 bp | TCATTTCAGACACATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGACATCAACAGCTGCTTaGCATTTTAGTCAGCCACTT | + |
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Preference number: 3 (lower is better) Translates to: SFQTHKLLHIQESKKAFQTSTAA*HFSQPL Trigger: AAGTGGCTGACTAAAATGCAAAGCAGCTGTTGATGT...CTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATGTGTCTGAAATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR TCA 72 bp | ACACCAACAATAAACATTCAAATAGGCCCAGAGAGCTaGCAAGGTCTCTCTATAATGCACATATCCCATACC | + |
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Preference number: 3 (lower is better) Translates to: TPTINIQIGPES*QGLSIMHISHT Trigger: GGTATGGGATATGTGCATTATAGAGAGACCTTGTCAGCTCTCTGGGCCTATTTGAATGTTTATTGTTGGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 72 bp | TCAATGGAAATGGTGATGGCATTCACTGAACCAAGTTaGCTTAAATTACAGCACAATGGGGGACATGATCTA | + |
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Preference number: 3 (lower is better) Translates to: SMEMVMAFTEPS*LKLQHNGGHDL Trigger: TAGATCATGTCCCCCATTGTGCTGTAATTTAAGCCAACTTGGTTCAGTGAATGCCATCACCATTTCCATTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | GCGTTCTGCCTAATCTACTTACCATCAAACTATAAATaGTTCTCTAGTGGGTCCTATGCAATCTGTACTTGT | + |
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Preference number: 3 (lower is better) Translates to: AFCLIYLPSNYK*FSSGSYAICTC Trigger: ACAAGTACAGATTGCATAGGACCCACTAGAGAAGCATTTATAGTTTGATGGTAAGTAGATTAGGCAGAACGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 72 bp | GTGCAACAGCCCATTGTAATGTCATTATTCATGACCTaGCCCTCTGTGTTACATATTGGAACAATACAAGTT | + |
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Preference number: 3 (lower is better) Translates to: VQQPIVMSLFMT*PSVLHIGTIQV Trigger: AACTTGTATTGTTCCAATATGTAACACAGAGGGCCAGGTCATGAATAATGACATTACAATGGGCTGTTGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR-3UTR CAA 90 bp | CTCTTCTTAACCATGAGTAGACAGGTATGTGTCTACCAAGATGACAGAAAGATGTACTCTTGCTTTAAATaGTATGCAGTCTGGGCATAT | + |
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Preference number: 3 (lower is better) Translates to: LFLTMSRQVCVYQDDRKMYSCFK*YAVWAY Trigger: ATATGCCCAGACTGCATACAATTTAAAGCAAGAGTA...CATCTTTCTGTCATCTTGGTAGACACATACCTGTCTACTCATGGTTAAGAAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR GCA 72 bp | TCCCAACTCTACCACTATAACGAAGTGACTCAACACTaGACATTTAAGAAGATCTATTCTTCCAATAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: SQLYHYNEVTQH*TFKKIYSSNSK Trigger: CTTGCTATTGGAAGAATAGATCTTCTTAAATGTGCAGTGTTGAGTCACTTCGTTATAGTGGTAGAGTTGGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 72 bp | AGATATAATTTGAAAGACACCAAATTCCCGAGGGGTTaGGAGGAGATCCTTTGTAATAGCATCTTCACATTA | + |
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Preference number: 3 (lower is better) Translates to: RYNLKDTKFPRG*EEILCNSIFTL Trigger: TAATGTGAAGATGCTATTACAAAGGATCTCCTCCCAACCCCTCGGGAATTTGGTGTCTTTCAAATTATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CCA 72 bp | AAGCTTGCTTACATCCTGATACCTGTTGTTGGAAGATaGGAAAGCAGCTATAGCGTATGCATAAAAACATAT | + |
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Preference number: 3 (lower is better) Translates to: KLAYILIPVVGR*ESSYSVCIKTY Trigger: ATATGTTTTTATGCATACGCTATAGCTGCTTTCCCATCTTCCAACAACAGGTATCAGGATGTAAGCAAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR TCA 72 bp | TTCAGGCTAATCGTGAATACTGTCATAAAGAAAGTTTaGATTAGGACTCAAAACCCTTTCAGTCATAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: FRLIVNTVIKKV*IRTQNPFSHSN Trigger: ATTGCTATGACTGAAAGGGTTTTGAGTCCTAATTCAAACTTTCTTTATGACAGTATTCACGATTAGCCTGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| CDS-3UTR TCA 90 bp | CATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAGATGGCAGACCACAAACTaGGGATTGCAAGTTCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: HKLLHIQESKKAFQKHGRWQTTN*GLQVPP Trigger: TGGCGGAACTTGCAATCCTCAGTTTGTGGTCTGCCA...TCTCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 72 bp | AAGCCACAGAACAGACCTGAGACATCAAGCCCGTTCTaGGGGTTAGGGCTATCTTCAGACATCTGGCTTATA | + |
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Preference number: 4 (lower is better) Translates to: KPQNRPETSSPF*GLGLSSDIWLI Trigger: TATAAGCCAGATGTCTGAAGATAGCCCTAACCCCAAGAACGGGCTTGATGTCTCAGGTCTGTTCTGTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| CDS-3UTR TCA 90 bp | CATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAGATCTGACTGGGAATTGTaGCTCCCTTTTTGTCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: HKLLHIQESKKAFQKHGRSDWEL*LPFCLW Trigger: CCAGAGACAAAAAGGGAGTCACAATTCCCAGTCAGA...TCTCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 72 bp | GGGACTGCTCTCTGTACCACATTGAACTGGGTACTCTaGTTTCTACTCAGCAACATTTCTCTCTACCCTAGC | + |
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Preference number: 4 (lower is better) Translates to: GTALCTTLNWVL*FLLSNISLYPS Trigger: GCTAGGGTAGAGAGAAATGTTGCTGAGTAGAAACAAGAGTACCCAGTTCAATGTGGTACAGAGAGCAGTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 72 bp | TGTGTACAGATTTTAGGGACTGCTCTCTGTACCACATaGAACTGGGTACTCTTGTTTCTACTCAGCAACATT | + |
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Preference number: 4 (lower is better) Translates to: CVQILGTALCTT*NWVLLFLLSNI Trigger: AATGTTGCTGAGTAGAAACAAGAGTACCCAGTTCAATGTGGTACAGAGAGCAGTCCCTAAAATCTGTACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 72 bp | GGTGTACAGATTTCCATGGTGAGATCTCAGGAAAAGTaGTCTCTGACTTTATCAACAGTCAGTCAATATTCA | + |
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Preference number: 4 (lower is better) Translates to: GVQISMVRSQEK*SLTLSTVSQYS Trigger: TGAATATTGACTGACTGTTGATAAAGTCAGAGACAACTTTTCCTGAGATCTCACCATGGAAATCTGTACACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 72 bp | CTGTTGCAATGTAATTTCATAGGAAAAATCAGCCTCTaGACTCCTAAAGTGGTCCATTACACTGTGTACAGA | + |
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Preference number: 4 (lower is better) Translates to: LLQCNFIGKISL*TPKVVHYTVYR Trigger: TCTGTACACAGTGTAATGGACCACTTTAGGAGTCAAGAGGCTGATTTTTCCTATGAAATTACATTGCAACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 72 bp | ATTCTCCACAGGAAGGTATTTCTAGTCTTATGTCCATaGGTAGCCAAACGGAACTTCATAAAAACACTTCCA | + |
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Preference number: 4 (lower is better) Translates to: ILHRKVFLVLCP*VAKRNFIKTLP Trigger: TGGAAGTGTTTTTATGAAGTTCCGTTTGGCTACCAATGGACATAAGACTAGAAATACCTTCCTGTGGAGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| 3UTR CAA 72 bp | CTAACAGTAAAAGGAACTATACTAGAAGGCTTCCTGTaGCAATGTAATTTCATAGGAAAAATCAGCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: LTVKGTILEGFL*QCNFIGKISLL Trigger: CAAGAGGCTGATTTTTCCTATGAAATTACATTGCAACAGGAAGCCTTCTAGTATAGTTCCTTTTACTGTTAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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| CDS-3UTR CAA 90 bp | CATAAGCTGCTGCACATCCAAGAGTCTAAGAAAGCATTCCAGAAACACGGGAGATCAAAGTACATGAACTaGTCCTCCCGCCGCGTGGGT | + |
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Preference number: 5 (lower is better) Translates to: HKLLHIQESKKAFQKHGRSKYMN*SSRRVG Trigger: ACCCACGCGGCGGGAGGACAAGTTCATGTACTTTGA...TCTCCCGTGTTTCTGGAATGCTTTCTTAGACTCTTGGATGTGCAGCAGCTTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000013807.8 |
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