Pregenerated sensors for PTDSS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025495Ensembl transcript IDs: ENSMUST00000026568.10, ENSMUST00000172479.8, ENSMUST00000172787.8, ENSMUST00000174058.8, ENSMUST00000209928.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAGTTGCCCCCGTAGTCCCTCTCTGGCAATGGGACTCCCAGCCTaGGATCCACATACTTCAGAAACTGTCGGCCATCCTGGACTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: GSCPRSPSLAMGLPA*DPHTSETVGHPGLS Trigger: AGACAGTCCAGGATGGCCGACAGTTTCTGAAGTATGTGGATCCCAGGCTGGGAGTCCCATTGCCAGAGAGGGACTACGGGGGCAACTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR CCA 90 bp | CTCATGACGCGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCATTaGTGGTCCCCTCTTCTTCTGCAGTTCCAGTCCCTAGCAGGTCAT | + |
|
Preference number: 1 (lower is better) Translates to: LMTRLRSPPQQSHRH*WSPLLLQFQSLAGH Trigger: ATGACCTGCTAGGGACTGGAACTGCAGAAGAAGAGGGGACCACCAATGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCGCGTCATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR CCA 90 bp | GGGCACGGCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTaGAGTGAGTTCCATGACGGCCAGGGCCGTTACACAAAGAAACCC | + |
|
Preference number: 1 (lower is better) Translates to: GHGLEAISEFEASLV*SEFHDGQGRYTKKP Trigger: GGGTTTCTTTGTGTAACGGCCCTGGCCGTCATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGCCGTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 90 bp | TGGTGGGGCACGGCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTaGTCTGGAGTGAGTTCCATGACGGCCAGGGCCGTTACACAAAGA | + |
|
Preference number: 1 (lower is better) Translates to: WWGTAWRQSLSLRPV*SGVSSMTARAVTQR Trigger: TCTTTGTGTAACGGCCCTGGCCGTCATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGCCGTGCCCCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 90 bp | ATGACGCGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCATTGGTaGTCCCCTCTTCTTCTGCAGTTCCAGTCCCTAGCAGGTCATCAT | + |
|
Preference number: 1 (lower is better) Translates to: MTRLRSPPQQSHRHW*SPLLLQFQSLAGHH Trigger: ATGATGACCTGCTAGGGACTGGAACTGCAGAAGAAGAGGGGACCACCAATGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCGCGTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR CCA 90 bp | AGCATCATAGATGAGGCAGTTGCCCCCGTAGTCCCTCTCTGGCAATaGGACTCCCAGCCTGGGATCCACATACTTCAGAAACTGTCGGCC | + |
|
Preference number: 1 (lower is better) Translates to: SIIDEAVAPVVPLWQ*DSQPGIHILQKLSA Trigger: GGCCGACAGTTTCTGAAGTATGTGGATCCCAGGCTGGGAGTCCCATTGCCAGAGAGGGACTACGGGGGCAACTGCCTCATCTATGATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR TCA 90 bp | CCCAGATGTTGTGGAAAGGGTCAGTCTTGTTGTCAGCATCATAGATaGGGCAGTTGCCCCCGTAGTCCCTCTCTGGCAATGGGACTCCCA | + |
|
Preference number: 1 (lower is better) Translates to: PRCCGKGQSCCQHHR*GSCPRSPSLAMGLP Trigger: TGGGAGTCCCATTGCCAGAGAGGGACTACGGGGGCAACTGCCTCATCTATGATGCTGACAACAAGACTGACCCTTTCCACAACATCTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR CCA 90 bp | GTTGTCAGCATCATAGATGAGGCAGTTGCCCCCGTAGTCCCTCTCTaGCAATGGGACTCCCAGCCTGGGATCCACATACTTCAGAAACTG | + |
|
Preference number: 1 (lower is better) Translates to: VVSIIDEAVAPVVPL*QWDSQPGIHILQKL Trigger: CAGTTTCTGAAGTATGTGGATCCCAGGCTGGGAGTCCCATTGCCAGAGAGGGACTACGGGGGCAACTGCCTCATCTATGATGCTGACAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR TCA 90 bp | GTGCTGAGATTGAGCACAAGGGAGACCATGGACCAGGGCCTTTGTTaGCCAGGTAGAAAGGACTCTTGCTCTAGAGCAAGTTCCAGGCTC | + |
|
Preference number: 1 (lower is better) Translates to: VLRLSTRETMDQGLC*PGRKDSCSRASSRL Trigger: GAGCCTGGAACTTGCTCTAGAGCAAGAGTCCTTTCTACCTGGTCAACAAAGGCCCTGGTCCATGGTCTCCCTTGTGCTCAATCTCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 90 bp | AAGCAAGCTTGGGTTGGACACCGAGGCCTGTGCCAGTCTGAACTATaGAGCAAAACCCTGGCTCAAAAATCCAAAGACACGACCCGTTGC | + |
|
Preference number: 1 (lower is better) Translates to: KQAWVGHRGLCQSEL*SKTLAQKSKDTTRC Trigger: GCAACGGGTCGTGTCTTTGGATTTTTGAGCCAGGGTTTTGCTGCATAGTTCAGACTGGCACAGGCCTCGGTGTCCAACCCAAGCTTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 90 bp | CCTCTGCAAGGCATAGAGCACGGGGCAAAGGGCAGCCAGAGGCTATaGACCTTCATCATCACTTTATTTGTTCCATTTGCTCAAGGGAGC | + |
|
Preference number: 1 (lower is better) Translates to: PLQGIEHGAKGSQRL*TFIITLFVPFAQGS Trigger: GCTCCCTTGAGCAAATGGAACAAATAAAGTGATGATGAAGGTGCATAGCCTCTGGCTGCCCTTTGCCCCGTGCTCTATGCCTTGCAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 90 bp | CCAGTCACGGATCATGAGCGTCTTCAGATACCAGCCAATGAAGTGTaGAGGAACAAAGCCATCCAGCTTGTCCCAGATGTTGTGGAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: PVTDHERLQIPANEV*RNKAIQLVPDVVER Trigger: CCTTTCCACAACATCTGGGACAAGCTGGATGGCTTTGTTCCTGCACACTTCATTGGCTGGTATCTGAAGACGCTCATGATCCGTGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR CCA 90 bp | AGGACTCTTGCTCTAGAGCAAGTTCCAGGCTCACTGTTCAGCTCATaGCCCCAAAGTAGTGTCAGGAGCCAATATGTGCATACACCTACC | + |
|
Preference number: 1 (lower is better) Translates to: RTLALEQVPGSLFSS*PQSSVRSQYVHTPT Trigger: GGTAGGTGTATGCACATATTGGCTCCTGACACTACTTTGGGGCCATGAGCTGAACAGTGAGCCTGGAACTTGCTCTAGAGCAAGAGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 90 bp | CTGGACTATCTTCTTTACTCCACTTCCAGGAGACCCAAAGACATCTaGCCACAGGCACTCATGTGGTGCACATGCACACATCCAGGCAAA | + |
|
Preference number: 1 (lower is better) Translates to: LDYLLYSTSRRPKDI*PQALMWCTCTHPGK Trigger: TTTGCCTGGATGTGTGCATGTGCACCACATGAGTGCCTGTGGCCAGATGTCTTTGGGTCTCCTGGAAGTGGAGTAAAGAAGATAGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 90 bp | CCCACCACTTTGCAGACATGTTGGTATTATGATATCCTTCACTTATaGTGCTGTAAGTGGGTGGGACCACAGGGTCTCATGGGGCTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: PTTLQTCWYYDILHL*CCKWVGPQGLMGLL Trigger: CAGAAGCCCCATGAGACCCTGTGGTCCCACCCACTTACAGCAGCATAAGTGAAGGATATCATAATACCAACATGTCTGCAAAGTGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 90 bp | ACACACAAAACCCAAGCTGAATCAGTCAGTGTCAGATACCTGTACTaGCTGCATCACTACAGCAGTGGTCACAGCAGCCAGAGAGTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: THKTQAESVSVRYLY*LHHYSSGHSSQRVG Trigger: TCCAACTCTCTGGCTGCTGTGACCACTGCTGTAGTGATGCAGGCAGTACAGGTATCTGACACTGACTGATTCAGCTTGGGTTTTGTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 90 bp | ATCAGTCAGTGTCAGATACCTGTACTGCCTGCATCACTACAGCAGTaGTCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACAT | + |
|
Preference number: 1 (lower is better) Translates to: ISQCQIPVLPASLQQ*SQQPESWRKTTEVH Trigger: ATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGACCACTGCTGTAGTGATGCAGGCAGTACAGGTATCTGACACTGACTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 90 bp | AGAGCACTTGCTGCTCCTATAGAGGCTCTGTTCCCAGCACAGCTCTaGACTATCTTCTTTACTCCACTTCCAGGAGACCCAAAGACATCT | + |
|
Preference number: 1 (lower is better) Translates to: RALAAPIEALFPAQL*TIFFTPLPGDPKTS Trigger: AGATGTCTTTGGGTCTCCTGGAAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAGCCTCTATAGGAGCAGCAAGTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR TCA 90 bp | TACAGGTCTCCAAGTTGGGCTCTCTGGCCGCAAAAGGCCAATCTGTaGCTGTCATGTATACACCATTCAGTTTATAGTCCTGCGTGGTTA | + |
|
Preference number: 1 (lower is better) Translates to: YRSPSWALWPQKANL*LSCIHHSVYSPAWL Trigger: TAACCACGCAGGACTATAAACTGAATGGTGTATACATGACAGTCACAGATTGGCCTTTTGCGGCCAGAGAGCCCAACTTGGAGACCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR TCA 90 bp | GAACTTTTAGTTAAACATAGTGGCACAAACCAGAATGTGGGAAGCTaGAGCTGGGCTGCTAAGAACTTGAAGCAAGCTTGGGTTGGACAC | + |
|
Preference number: 1 (lower is better) Translates to: ELLVKHSGTNQNVGS*SWAAKNLKQAWVGH Trigger: GTGTCCAACCCAAGCTTGCTTCAAGTTCTTAGCAGCCCAGCTTCAGCTTCCCACATTCTGGTTTGTGCCACTATGTTTAACTAAAAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGTGAGGCTCATGACGCGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCAACGGCTCTGGCCTGGTaGCTCTGCTGCTTCTGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: EGEAHDAAEVPSSAVTPSTALAW*LCCFCR Trigger: GCGACAGAAGCAGCAGAGTCACCAGGCCAGAGCCGT...TGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCGCGTCATGAGCCTCACCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR CAA 90 bp | AGAATCAGGTGGTGGTGGGGCACGGCTTGGAGGCAATCTCTGAGTTaGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGACGGCCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RIRWWWGTAWRQSLS*RPVWSGVSSMTARA Trigger: GGCCCTGGCCGTCATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGCCGTGCCCCACCACCACCTGATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 90 bp | GCTCATGACGCGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCATaGGTGGTCCCCTCTTCTTCTGCAGTTCCAGTCCCTAGCAGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AHDAAEVPSSAVTPS*VVPSSSAVPVPSRS Trigger: TGACCTGCTAGGGACTGGAACTGCAGAAGAAGAGGGGACCACCAATGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCGCGTCATGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGGGAGAAATGGGACAGCCCCTTGGCACAAGGCCAGTGACGAGGGTGAGGAATGGGACAGCCCCTTaGCACAAGGCCAGTGACGAG | + |
|
Preference number: 2 (lower is better) Translates to: RKGEMGQPLGTRPVTRVRNGTAP*HKASDE Trigger: CTCGTCACTGGCCTTGTGCCAAGGGGCTGTCCCATT...CCTCACCCTCGTCACTGGCCTTGTGCCAAGGGGCTGTCCCATTTCTCCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026568.10 ENSMUST00000209928.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTCACAGTCATTTCTCGTGGTTATTCTTCAGCGATCACCAGCCCCACACCCATCAAGGGAGCCATGGTaGCAGCACCCTGGCACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GSQSFLVVILQRSPAPHPSREPW*QHPGTW Trigger: CCAGGTGCCAGGGTGCTGTCACCATGGCTCCCTTGA...TGGGTGTGGGGCTGGTGATCGCTGAAGAATAACCACGAGAAATGACTGTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGAATGGGACAGCCCCTTaGCACAAGGCCAGTGACGAG | + |
|
Preference number: 2 (lower is better) Translates to: SQQPESWRKTTEVHGGGQNGTAP*HKASDE Trigger: CTCGTCACTGGCCTTGTGCCAAGGGGCTGTCCCATT...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | GTCACACCGTCATTGGTGGTCCCCTCTTCTTCTGCAGTTCCAGTCCCTAGCAGGCGAGGAAGGGAGAAATaGGACAGCCCCTTGGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: VTPSLVVPSSSAVPVPSRRGREK*DSPLAQ Trigger: TTGTGCCAAGGGGCTGTCCCATTTCTCCCTTCCTCG...CCTGCTAGGGACTGGAACTGCAGAAGAAGAGGGGACCACCAATGACGGTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR-3UTR CCA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGATGGTGACAGCACCCTaGCACCTGGGGTACAGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: SQQPESWRKTTEVHGGGQMVTAP*HLGYRS Trigger: AGACCTGTACCCCAGGTGCCAGGGTGCTGTCACCAT...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | GCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGGGAGGTACATGGGGGTaGACAGGGGCTAAGGACACC | + |
|
Preference number: 2 (lower is better) Translates to: AWRQSLSLRPVWSGVSSMGGTWG*TGAKDT Trigger: GGTGTCCTTAGCCCCTGTCCACCCCCATGTACCTCC...CATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | TATTTGTTCCATTTGCTCAAGGGAGCCATGGTGACAGCACCCTGGCACCTGGGGGCACAAGGGAGACCATaGACCAGGGCCTTTGTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: YLFHLLKGAMVTAPWHLGAQGRP*TRAFVD Trigger: GTCAACAAAGGCCCTGGTCCATGGTCTCCCTTGTGC...CCCCAGGTGCCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | GCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGGCTGCTGTAAGTGGGTaGGACCACAGGGTCTCATGG | + |
|
Preference number: 2 (lower is better) Translates to: AWRQSLSLRPVWSGVSSMAAVSG*DHRVSW Trigger: CCATGAGACCCTGTGGTCCCACCCACTTACAGCAGC...CATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGGCACAAACCAGAATGTaGGAAGCTGAAGCTGGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SQQPESWRKTTEVHGGGQAQTRM*EAEAGL Trigger: CAGCCCAGCTTCAGCTTCCCACATTCTGGTTTGTGC...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 90 bp | GCAGCCAGAGGCTATGCACCTTCATCATCACTTTATTTGTTCCATTaGCTCAAGGGAGCCATGGTGACAGCACCCTGGCACCTGGGGTAC | + |
|
Preference number: 2 (lower is better) Translates to: AARGYAPSSSLYLFH*LKGAMVTAPWHLGY Trigger: GTACCCCAGGTGCCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATAAAGTGATGATGAAGGTGCATAGCCTCTGGCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 90 bp | GGGCAAAGGGCAGCCAGAGGCTATGCACCTTCATCATCACTTTATTaGTTCCATTTGCTCAAGGGAGCCATGGTGACAGCACCCTGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GQRAARGYAPSSSLY*FHLLKGAMVTAPWH Trigger: GTGCCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATAAAGTGATGATGAAGGTGCATAGCCTCTGGCTGCCCTTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR TCA 90 bp | GCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGGACCAGGGCCTTTGTTaGCCAGGTAGAAAGGACTCT | + |
|
Preference number: 2 (lower is better) Translates to: AWRQSLSLRPVWSGVSSMDQGLC*PGRKDS Trigger: AGAGTCCTTTCTACCTGGTCAACAAAGGCCCTGGTC...CATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTTACCTCATGAGAATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTGAGGACGCAGAGAGATaGGCAAACTTACAGCTGGTA | + |
|
Preference number: 2 (lower is better) Translates to: PYLMRMAVRKERHHGHGAEDAER*ANLQLV Trigger: TACCAGCTGTAAGTTTGCTCATCTCTCTGCGTCCTC...AGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATTCTCATGAGGTAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR GCA 90 bp | GGCACGGCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTGGTAGAAAGGACTCTTaGTCTAGAGCAAGTTCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GTAWRQSLSLRPVWSGVSGRKDS*SRASSR Trigger: CCTGGAACTTGCTCTAGAGCAAGAGTCCTTTCTACC...ACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGCCGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | CAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGACGGCCAGGTCACTGTTCAGCTCATaGCCCCAAAGTAGTGTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: QSLSLRPVWSGVSSMTARSLFSS*PQSSVR Trigger: CCTGACACTACTTTGGGGCCATGAGCTGAACAGTGA...CCTGGCCGTCATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | GGCTCACAGTCATTTCTCGTGGTTATTCTTCAGCGATCACCAGCCCCACACCCATTATGCTGCTGTAAGTaGGTGGGACCACAGGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GSQSFLVVILQRSPAPHPLCCCK*VGPQGL Trigger: GAGACCCTGTGGTCCCACCCACTTACAGCAGCATAA...TGGGTGTGGGGCTGGTGATCGCTGAAGAATAACCACGAGAAATGACTGTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR GCA 90 bp | AATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTGTGGAGATGTCTCTTCAGGAGCCAATATGTaGATACACCTACCTGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: NGCQERETPRAWGCGDVSSGANM*IHLPAH Trigger: GTGTGCAGGTAGGTGTATGCACATATTGGCTCCTGA...AGAGACATCTCCACAGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR GCA 90 bp | GTGGTCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGGATATCCTTCACTTATaGTGCTGTAAGTGGGTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: VVTAARELEENNGGTWGWDILHL*CCKWVG Trigger: TCCCACCCACTTACAGCAGCATAAGTGAAGGATATC...CCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGACCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR GCA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGAAAGACACGACCCGTTaGCTTAGTAAGCTAAGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SQQPESWRKTTEVHGGGQKDTTR*LSKLRA Trigger: TGCCCTTAGCTTACTAAGGCAACGGGTCGTGTCTTT...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR GCA 90 bp | GGCACGGCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTGGATGGCCCAGCAATTaGACTACCATACACACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: GTAWRQSLSLRPVWSGVSGWPSN*TTIHTK Trigger: TTTTGTGTGTATGGTAGTGCAATTGCTGGGCCATCC...ACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGCCGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | AGCATCATAGATGAGGCAGTTGCCCCCGTAGTCCCTCTCTGGCAATGGGACTCCCCATCCTGGACTGTCTaGAAAAGGATGAAGATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: SIIDEAVAPVVPLWQWDSPSWTV*KRMKMR Trigger: TCTCATCTTCATCCTTTTCCAGACAGTCCAGGATGG...GGAGTCCCATTGCCAGAGAGGGACTACGGGGGCAACTGCCTCATCTATGATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTTACCTCATGAGAATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTCAAATGGTTTGCTACTaGATTCCCAATGGCTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: PYLMRMAVRKERHHGHGAQMVCY*IPNGCD Trigger: GTCACAGCCATTGGGAATGCAGTAGCAAACCATTTG...AGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATTCTCATGAGGTAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCCAATGGCTGTGACCGTAAAGCAAGGCTCACAGTCATTTCTCGTGGTTATGACCACAGGGTCTCATaGGGCTTCTGCCTACCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: IPNGCDRKARLTVISRGYDHRVS*GFCLPH Trigger: ATGGGGTAGGCAGAAGCCCCATGAGACCCTGTGGTC...ATAACCACGAGAAATGACTGTGAGCCTTGCTTTACGGTCACAGCCATTGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTCCAGGAGACCCAGCAGCCAGAGAGTTaGAGGAAAACAACGGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: LCSQHSSGLSSLLHFQETQQPES*RKTTEV Trigger: TACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTG...GGTCTCCTGGAAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR TCA 90 bp | GCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGAGTAAGCTAAGGGCATaGCTTGCACATTTGCATTCG | + |
|
Preference number: 2 (lower is better) Translates to: AWRQSLSLRPVWSGVSSMSKLRA*LAHLHS Trigger: CGAATGCAAATGTGCAAGTCATGCCCTTAGCTTACT...CATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR TCA 90 bp | AATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTGTGGAGATGTCTCTACACAAAACCCAAGCTaGATCAGTCAGTGTCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: NGCQERETPRAWGCGDVSTQNPS*ISQCQI Trigger: TATCTGACACTGACTGATTCAGCTTGGGTTTTGTGT...AGAGACATCTCCACAGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR GCA 90 bp | TATTTGTTCCATTTGCTCAAGGGAGCCATGGTGACAGCACCCTGGCACCTGGGGGTGCATACACCTACCTaGACACAAACATGTATTCTC | + |
|
Preference number: 2 (lower is better) Translates to: YLFHLLKGAMVTAPWHLGVHTPT*TQTCIL Trigger: GAGAATACATGTTTGTGTGCAGGTAGGTGTATGCAC...CCCCAGGTGCCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | AATGGCTGTGACCGTAAAGCAAGGCTCACAGTCATTTCTCGTGGTTATTCTTCACGAGGAAGGGAGAAATaGGACAGCCCCTTGGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: NGCDRKARLTVISRGYSSRGREK*DSPLAQ Trigger: TTGTGCCAAGGGGCTGTCCCATTTCTCCCTTCCTCG...TGAAGAATAACCACGAGAAATGACTGTGAGCCTTGCTTTACGGTCACAGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | CTGATGATCATGCACATCCACCAGTCACGGATCATGAGCGTCTTCAGATACCAGTTGTCCCAGATGTTGTaGAAAGGGTCAGTCTTGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LMIMHIHQSRIMSVFRYQLSQML*KGSVLL Trigger: CAACAAGACTGACCCTTTCCACAACATCTGGGACAA...CTGGTATCTGAAGACGCTCATGATCCGTGACTGGTGGATGTGCATGATCATCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCTCTCTGGCCGCAAAAGGCCAATCTGTGACTGTCATGTATACACCATTCAGTCTAGACCCACCACTTTaGAGACATGTTGGTATTATG | + |
|
Preference number: 2 (lower is better) Translates to: GSLAAKGQSVTVMYTPFSLDPPL*RHVGIM Trigger: CATAATACCAACATGTCTGCAAAGTGGTGGGTCTAG...ACTGAATGGTGTATACATGACAGTCACAGATTGGCCTTTTGCGGCCAGAGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CCA 90 bp | CCTTACCTCATGAGAATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTACTTTGCAGACATGTTaGTATTATGATATCCTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: PYLMRMAVRKERHHGHGATLQTC*YYDILH Trigger: GTGAAGGATATCATAATACCAACATGTCTGCAAAGT...AGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATTCTCATGAGGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 90 bp | AGGCTCCAAAGGAAATGGCTCAGTGCTGACTCTAGACCCACCACTTaGCAGACATGTTGGTATTATGATATCCTTCACTTATGCTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: RLQRKWLSADSRPTT*QTCWYYDILHLCCC Trigger: ACAGCAGCATAAGTGAAGGATATCATAATACCAACATGTCTGCAAAGTGGTGGGTCTAGAGTCAGCACTGAGCCATTTCCTTTGGAGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTCCAGGAGACCCATGACTTGCACATTTaGATTCGTGGGAAAATTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LCSQHSSGLSSLLHFQETHDLHI*IRGKIE Trigger: TTCAATTTTCCCACGAATGCAAATGTGCAAGTCATG...GGTCTCCTGGAAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR TCA 90 bp | CCTATAGAGGCTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTGACATGTTGGTATTATaGTATCCTTCACTTATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: PIEALFPAQLWTIFFTPLDMLVL*YPSLML Trigger: CAGCATAAGTGAAGGATATCATAATACCAACATGTC...AAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAGCCTCTATAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR TCA 72 bp | GGGTGCCCATCCCGGTTGTTGACGGCTCTGGCCTGGTaGCTCTGCTGCTTCTGTCGCCGGGTCTCCTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GCPSRLLTALAW*LCCFCRRVSLY Trigger: GTACAAGGAGACCCGGCGACAGAAGCAGCAGAGTCACCAGGCCAGAGCCGTCAACAACCGGGATGGGCACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR CCA 72 bp | CGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCATTaGTGGTCCCCTCTTCTTCTGCAGTTCCAGTCCCTA | + |
|
Preference number: 3 (lower is better) Translates to: RLRSPPQQSHRH*WSPLLLQFQSL Trigger: TAGGGACTGGAACTGCAGAAGAAGAGGGGACCACCAATGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR CCA 72 bp | TTCCATTTGCTCAAGGGAGCCATGGTGACAGCACCCTaGCACCTGGGGTACAGGTCTCCAAGTTGGGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FHLLKGAMVTAP*HLGYRSPSWAL Trigger: GAGAGCCCAACTTGGAGACCTGTACCCCAGGTGCCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | CCCCGTAGTCCCTCTCTGGCAATGGGACTCCCAGCCTaGGATCCACATACTTCAGAAACTGTCGGCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: PRSPSLAMGLPA*DPHTSETVGHP Trigger: AGGATGGCCGACAGTTTCTGAAGTATGTGGATCCCAGGCTGGGAGTCCCATTGCCAGAGAGGGACTACGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR CCA 72 bp | CTGAGGTCCCCTCCTCAGCAGTCACACCGTCATTGGTaGTCCCCTCTTCTTCTGCAGTTCCAGTCCCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LRSPPQQSHRHW*SPLLLQFQSLA Trigger: TGCTAGGGACTGGAACTGCAGAAGAAGAGGGGACCACCAATGACGGTGTGACTGCTGAGGAGGGGACCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| 3UTR CCA 72 bp | CTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTGTaGAGATGTCTCTGTGAGAAGAGCACTTGCTGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: LSGKRDTTGMGL*RCLCEKSTCCS Trigger: GGAGCAGCAAGTGCTCTTCTCACAGAGACATCTCCACAGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | GATGAGGCAGTTGCCCCCGTAGTCCCTCTCTGGCAATaGGACTCCCAGCCTGGGATCCACATACTTCAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: DEAVAPVVPLWQ*DSQPGIHILQK Trigger: TTTCTGAAGTATGTGGATCCCAGGCTGGGAGTCCCATTGCCAGAGAGGGACTACGGGGGCAACTGCCTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR TCA 72 bp | AGAATGTGGGAAGCTGAAGCTGGGCTGCTAAGAACTTaGAGCAAGCTTGGGTTGGACACCGAGGCCTGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: RMWEAEAGLLRT*SKLGLDTEACA Trigger: GGCACAGGCCTCGGTGTCCAACCCAAGCTTGCTTCAAGTTCTTAGCAGCCCAGCTTCAGCTTCCCACATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | GTAAGTGGGTGGGACCACAGGGTCTCATGGGGCTTCTaGCTACCCCATAAAGAGTGGAGAAAGAGTACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: VSGWDHRVSWGF*LPHKEWRKSTE Trigger: CTCGGTACTCTTTCTCCACTCTTTATGGGGTAGGCAGAAGCCCCATGAGACCCTGTGGTCCCACCCACTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | GCATCACTACAGCAGTGGTCACAGCAGCCAGAGAGTTaGAGGAAAACAACGGAGGTACATGGGGGTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: ASLQQWSQQPES*RKTTEVHGGGQ Trigger: CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGACCACTGCTGTAGTGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | ATCATAGATGAGGCAGTTGCCCCCGTAGTCCCTCTCTaGCAATGGGACTCCCAGCCTGGGATCCACATACTT | + |
|
Preference number: 3 (lower is better) Translates to: IIDEAVAPVVPL*QWDSQPGIHIL Trigger: AAGTATGTGGATCCCAGGCTGGGAGTCCCATTGCCAGAGAGGGACTACGGGGGCAACTGCCTCATCTATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACCTCATGAGAATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTACAGCAGCCAGAGAGTaGGAGGAAAACAACGGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PYLMRMAVRKERHHGHGATAARE*EENNGG Trigger: ACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGT...AGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATTCTCATGAGGTAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGTGGGCTGCTAAGAACTaGAAGCAAGCTTGGGTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: SQQPESWRKTTEVHGGGQWAAKN*KQAWVG Trigger: TCCAACCCAAGCTTGCTTCAAGTTCTTAGCAGCCCA...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR TCA 72 bp | CACTTTATTTGTTCCATTTGCTCAAGGGAGCCATGGTaGCAGCACCCTGGCACCTGGGGTACAGGTCTCCAA | + |
|
Preference number: 3 (lower is better) Translates to: HFICSICSREPW*QHPGTWGTGLQ Trigger: TTGGAGACCTGTACCCCAGGTGCCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR TCA 72 bp | TGTGGAAAGGGTCAGTCTTGTTGTCAGCATCATAGATaGGGCAGTTGCCCCCGTAGTCCCTCTCTGGCAATG | + |
|
Preference number: 3 (lower is better) Translates to: CGKGQSCCQHHR*GSCPRSPSLAM Trigger: CATTGCCAGAGAGGGACTACGGGGGCAACTGCCTCATCTATGATGCTGACAACAAGACTGACCCTTTCCACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR GCA 72 bp | TGGGTTGGACACCGAGGCCTGTGCCAGTCTGAACTATaGAGCAAAACCCTGGCTCAAAAATCCAAAGACACG | + |
|
Preference number: 3 (lower is better) Translates to: WVGHRGLCQSEL*SKTLAQKSKDT Trigger: CGTGTCTTTGGATTTTTGAGCCAGGGTTTTGCTGCATAGTTCAGACTGGCACAGGCCTCGGTGTCCAACCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | ACCCAAGCTGAATCAGTCAGTGTCAGATACCTGTACTaGCTGCATCACTACAGCAGTGGTCACAGCAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TQAESVSVRYLY*LHHYSSGHSSQ Trigger: CTGGCTGCTGTGACCACTGCTGTAGTGATGCAGGCAGTACAGGTATCTGACACTGACTGATTCAGCTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | AGGGTCTCATGGGGCTTCTGCCTACCCCATAAAGAGTaGAGAAAGAGTACCGAGATACCAAGATACCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: RVSWGFCLPHKE*RKSTEIPRYLP Trigger: GGGGAGGTATCTTGGTATCTCGGTACTCTTTCTCCACTCTTTATGGGGTAGGCAGAAGCCCCATGAGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR TCA 72 bp | TTGAGCACAAGGGAGACCATGGACCAGGGCCTTTGTTaGCCAGGTAGAAAGGACTCTTGCTCTAGAGCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSTRETMDQGLC*PGRKDSCSRAS Trigger: ACTTGCTCTAGAGCAAGAGTCCTTTCTACCTGGTCAACAAAGGCCCTGGTCCATGGTCTCCCTTGTGCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | AAGCTGAATCAGTCAGTGTCAGATACCTGTACTGCCTaGATCACTACAGCAGTGGTCACAGCAGCCAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KLNQSVSDTCTA*ITTAVVTAARE Trigger: CTCTCTGGCTGCTGTGACCACTGCTGTAGTGATGCAGGCAGTACAGGTATCTGACACTGACTGATTCAGCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | GCTCTAGAGCAAGTTCCAGGCTCACTGTTCAGCTCATaGCCCCAAAGTAGTGTCAGGAGCCAATATGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: ALEQVPGSLFSS*PQSSVRSQYVH Trigger: ATGCACATATTGGCTCCTGACACTACTTTGGGGCCATGAGCTGAACAGTGAGCCTGGAACTTGCTCTAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | GAGGCCTGTGCCAGTCTGAACTATGCAGCAAAACCCTaGCTCAAAAATCCAAAGACACGACCCGTTGCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EACASLNYAAKP*LKNPKTRPVAL Trigger: TAAGGCAACGGGTCGTGTCTTTGGATTTTTGAGCCAGGGTTTTGCTGCATAGTTCAGACTGGCACAGGCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | TGTCAGATACCTGTACTGCCTGCATCACTACAGCAGTaGTCACAGCAGCCAGAGAGTTGGAGGAAAACAACG | + |
|
Preference number: 3 (lower is better) Translates to: CQIPVLPASLQQ*SQQPESWRKTT Trigger: CGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGACCACTGCTGTAGTGATGCAGGCAGTACAGGTATCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGTCTAGACCCACCACTTaGCAGACATGTTGGTATTAT | + |
|
Preference number: 3 (lower is better) Translates to: SQQPESWRKTTEVHGGGQSRPTT*QTCWYY Trigger: ATAATACCAACATGTCTGCAAAGTGGTGGGTCTAGA...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | AGTAGTGTCAGGAGCCAATATGTGCATACACCTACCTaGACACAAACATGTATTCTCAGGTGCCCCTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSVRSQYVHTPT*TQTCILRCPSW Trigger: CCAGGAGGGGCACCTGAGAATACATGTTTGTGTGCAGGTAGGTGTATGCACATATTGGCTCCTGACACTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | GGCATAGAGCACGGGGCAAAGGGCAGCCAGAGGCTATaGACCTTCATCATCACTTTATTTGTTCCATTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GIEHGAKGSQRL*TFIITLFVPFA Trigger: AGCAAATGGAACAAATAAAGTGATGATGAAGGTGCATAGCCTCTGGCTGCCCTTTGCCCCGTGCTCTATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | TGGTATTATGATATCCTTCACTTATGCTGCTGTAAGTaGGTGGGACCACAGGGTCTCATGGGGCTTCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: WYYDILHLCCCK*VGPQGLMGLLP Trigger: AGGCAGAAGCCCCATGAGACCCTGTGGTCCCACCCACTTACAGCAGCATAAGTGAAGGATATCATAATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | CAGACATGTTGGTATTATGATATCCTTCACTTATGCTaGTGTAAGTGGGTGGGACCACAGGGTCTCATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: QTCWYYDILHLC*CKWVGPQGLMG Trigger: CCCCATGAGACCCTGTGGTCCCACCCACTTACAGCAGCATAAGTGAAGGATATCATAATACCAACATGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR TCA 72 bp | CCAAGTTGGGCTCTCTGGCCGCAAAAGGCCAATCTGTaGCTGTCATGTATACACCATTCAGTTTATAGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PSWALWPQKANL*LSCIHHSVYSP Trigger: AGGACTATAAACTGAATGGTGTATACATGACAGTCACAGATTGGCCTTTTGCGGCCAGAGAGCCCAACTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | ACTTCAGCCCCAGGGGGTCTGATTGGCCTCCTCTATTaGCATCTGCACTCATGTACAGACATAATTAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TSAPGGLIGLLY*HLHSCTDIIKK Trigger: TTTCTTAATTATGTCTGTACATGAGTGCAGATGGCAATAGAGGAGGCCAATCAGACCCCCTGGGGCTGAAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR GCA 72 bp | TTGCAGACATGTTGGTATTATGATATCCTTCACTTATaGTGCTGTAAGTGGGTGGGACCACAGGGTCTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LQTCWYYDILHL*CCKWVGPQGLM Trigger: CATGAGACCCTGTGGTCCCACCCACTTACAGCAGCATAAGTGAAGGATATCATAATACCAACATGTCTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | CTGGGATCCACATACTTCAGAAACTGTCGGCCATCCTaGACTGTCTGGAAAAGGATGAAGATGAGAAACAAT | + |
|
Preference number: 3 (lower is better) Translates to: LGSTYFRNCRPS*TVWKRMKMRNN Trigger: ATTGTTTCTCATCTTCATCCTTTTCCAGACAGTCCAGGATGGCCGACAGTTTCTGAAGTATGTGGATCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172479.8 |
||
| 3UTR GCA 72 bp | AAAATTGAACTTGTTGGCAGACAAATGGTTTGCTACTaGATTCCCAATGGCTGTGACCGTAAAGCAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KIELVGRQMVCY*IPNGCDRKARL Trigger: GAGCCTTGCTTTACGGTCACAGCCATTGGGAATGCAGTAGCAAACCATTTGTCTGCCAACAAGTTCAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CCA 72 bp | CTGTCATGTATACACCATTCAGTTTATAGTCCTGCGTaGTTAAAGGAAGGCTCCAAAGGAAATGGCTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSCIHHSVYSPA*LKEGSKGNGSV Trigger: CACTGAGCCATTTCCTTTGGAGCCTTCCTTTAACCACGCAGGACTATAAACTGAATGGTGTATACATGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR TCA 90 bp | AGGAAGGGAGAAATGGGACAGCCCCTTGGCACAAGGCCAGTGACGAGGGTGAGGCCCACCAGCACTCGCTaGAGTTGGGCAGCTGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKGEMGQPLGTRPVTRVRPTSTR*SWAAGA Trigger: AGCACCAGCTGCCCAACTTCAGCGAGTGCTGGTGGG...CCTCACCCTCGTCACTGGCCTTGTGCCAAGGGGCTGTCCCATTTCTCCCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 72 bp | GCGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCATaGGTGGTCCCCTCTTCTTCTGCAGTTCCAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAEVPSSAVTPS*VVPSSSAVPVP Trigger: AGGGACTGGAACTGCAGAAGAAGAGGGGACCACCAATGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAGGCTCATGACGCGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCATCGTAGATCTCACGCATaGCCACACCACCCACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVRLMTRLRSPPQQSHRHRRSHA*PHHPRS Trigger: TGAACGTGGGTGGTGTGGCCATGCGTGAGATCTACG...ATGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCGCGTCATGAGCCTCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| CDS-3UTR TCA 90 bp | CAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGACGGCCAGGGCAGGAACACCAGGATaGTGCCACACACGGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSLSLRPVWSGVSSMTARAGTPG*CHTRPA Trigger: GGCTGGCCGTGTGTGGCATCATCCTGGTGTTCCTGC...CCTGGCCGTCATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR TCA 90 bp | CCTTACCTCATGAGAATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTACGGCTCTGGCCTGGTaGCTCTGCTGCTTCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PYLMRMAVRKERHHGHGATALAW*LCCFCR Trigger: GCGACAGAAGCAGCAGAGTCACCAGGCCAGAGCCGT...AGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATTCTCATGAGGTAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR TCA 90 bp | GTGGTCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGGATGTAGAAGGGCAGTaGCAGGGTGAGTGTGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VVTAARELEENNGGTWGWDVEGQ*QGECVR Trigger: CCGCACACACTCACCCTGTCACTGCCCTTCTACATC...CCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGGTCCCTCTCTGGCAATaGGACTCCCAGCCTGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SQQPESWRKTTEVHGGGQVPLWQ*DSQPGI Trigger: GATCCCAGGCTGGGAGTCCCATTGCCAGAGAGGGAC...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | AGGAAGGGAGAAATGGGACAGCCCCTTGGCACAAGGCCAGTGACGAGGGTGAGGCTTGCCCTTGTAGGTTaGAATGTTCCAGAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RKGEMGQPLGTRPVTRVRLALVG*NVPEAL Trigger: CAGGGCCTCTGGAACATTCCAACCTACAAGGGCAAG...CCTCACCCTCGTCACTGGCCTTGTGCCAAGGGGCTGTCCCATTTCTCCCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | GCATACACCTACCTGCACACAAACATGTATTCTCAGGTGCCCCTCCTGGAGTGTGCCAGCGGTGCAGGCTaGAGGCTGGCTTCCACTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AYTYLHTNMYSQVPLLECASGAG*RLASTQ Trigger: TTGAGTGGAAGCCAGCCTCCAGCCTGCACCGCTGGC...ACACTCCAGGAGGGGCACCTGAGAATACATGTTTGTGTGCAGGTAGGTGTATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR TCA 90 bp | GCTCATGACGCGGCTGAGGTCCCCTCCTCAGCAGTCACACCGTCATTGGTGGTCCAGCAAATTCATCCATaGAGTCGTAGATCTCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: AHDAAEVPSSAVTPSLVVQQIHP*SRRSHA Trigger: TGCGTGAGATCTACGACTTCATGGATGAATTTGCTG...GACCACCAATGACGGTGTGACTGCTGAGGAGGGGACCTCAGCCGCGTCATGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| CDS-3UTR GCA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGTCATGCCACAGTAGATaGCCAGCCCGTTGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: SQQPESWRKTTEVHGGGQSCHSR*PARCRR Trigger: TCGTCTGCAACGGGCTGGGCATCTACTGTGGCATGA...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTCCAGGAGACCCCCGTAGTCCCTCTCTaGCAATGGGACTCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCSQHSSGLSSLLHFQETPVVPL*QWDSQP Trigger: AGGCTGGGAGTCCCATTGCCAGAGAGGGACTACGGG...GGTCTCCTGGAAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | GGCACGGCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTATGGGACTCCCAGCCTaGGATCCACATACTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GTAWRQSLSLRPVWSGVSMGLPA*DPHTSE Trigger: TTCTGAAGTATGTGGATCCCAGGCTGGGAGTCCCAT...ACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGCCGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTCCAGGAGACCGTGCAGGCTGGAGGCTaGCTTCCACTCAAAGCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LCSQHSSGLSSLLHFQETVQAGG*LPLKAY Trigger: GTACGCTTTGAGTGGAAGCCAGCCTCCAGCCTGCAC...GGTCTCCTGGAAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCACAGTCATTTCTCGTGGTTATTCTTCAGCGATCACCAGCCCCACACCCACGTAGATCTCACGCATaGCCACACCACCCACGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQSFLVVILQRSPAPHPRRSHA*PHHPRS Trigger: TGAACGTGGGTGGTGTGGCCATGCGTGAGATCTACG...TGGGTGTGGGGCTGGTGATCGCTGAAGAATAACCACGAGAAATGACTGTGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR GCA 90 bp | GCATACACCTACCTGCACACAAACATGTATTCTCAGGTGCCCCTCCTGGAGTGTACTCGAGGGTCTTCATaGCACAGTAGATGCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYTYLHTNMYSQVPLLECTRGSS*HSRCPA Trigger: GGCTGGGCATCTACTGTGGCATGAAGACCCTCGAGT...ACACTCCAGGAGGGGCACCTGAGAATACATGTTTGTGTGCAGGTAGGTGTATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR GCA 90 bp | GGCACGGCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTATGTTCCAGAGGCCCTaGCACTTATATGTCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTAWRQSLSLRPVWSGVSMFQRP*HLYVFR Trigger: CCTGAAGACATATAAGTGGCAGGGCCTCTGGAACAT...ACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGCCGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR TCA 90 bp | AATGGCTGTCAGGAAAGAGAGACACCACGGGCATGGGGCTGTGGAGATGTCTCTGCTTCAATTCATCCATaGAGTCGTAGATCTCACGCA | + |
|
Preference number: 4 (lower is better) Translates to: NGCQERETPRAWGCGDVSASIHP*SRRSHA Trigger: TGCGTGAGATCTACGACTTCATGGATGAATTGAAGC...AGAGACATCTCCACAGCCCCATGCCCGTGGTGTCTCTCTTTCCTGACAGCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | CAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGACGGCCAGGCCATCCTGGACTGTCTaGAAAAGGATGAAGATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSLSLRPVWSGVSSMTARPSWTV*KRMKMR Trigger: TCTCATCTTCATCCTTTTCCAGACAGTCCAGGATGG...CCTGGCCGTCATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | ATTCCCAATGGCTGTGACCGTAAAGCAAGGCTCACAGTCATTTCTCGTGGTTATCTGAAGTTGGGCAGCTaGTGCTCCAGGCTGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: IPNGCDRKARLTVISRGYLKLGS*CSRLYS Trigger: GGAGTACAGCCTGGAGCACCAGCTGCCCAACTTCAG...ATAACCACGAGAAATGACTGTGAGCCTTGCTTTACGGTCACAGCCATTGGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCACAGTCATTTCTCGTGGTTATTCTTCAGCGATCACCAGCCCCACACCCATTGTCCCAGATGTTGTaGAAAGGGTCAGTCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQSFLVVILQRSPAPHPLSQML*KGSVLL Trigger: CAACAAGACTGACCCTTTCCACAACATCTGGGACAA...TGGGTGTGGGGCTGGTGATCGCTGAAGAATAACCACGAGAAATGACTGTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 72 bp | GGCTATGCACCTTCATCATCACTTTATTTGTTCCATTaGCTCAAGGGAGCCATGGTGACAGCACCCTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GYAPSSSLYLFH*LKGAMVTAPWH Trigger: GTGCCAGGGTGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATAAAGTGATGATGAAGGTGCATAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR GCA 90 bp | GCTTGGAGGCAATCTCTGAGTTTGAGGCCAGTCTGGTCTGGAGTGAGTTCCATGCAATCCTCTTCATCTTaGCCTTGTAGGTTGGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: AWRQSLSLRPVWSGVSSMQSSSS*PCRLEC Trigger: ACATTCCAACCTACAAGGGCAAGATGAAGAGGATTG...CATGGAACTCACTCCAGACCAGACTGGCCTCAAACTCAGAGATTGCCTCCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | CTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTCCAGGAGACCATGAGGTCTGGAAAATaGCCCGTCTTTAGCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCSQHSSGLSSLLHFQETMRSGK*PVFSLC Trigger: ACACAAGCTAAAGACGGGCCATTTTCCAGACCTCAT...GGTCTCCTGGAAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | TACCTCTCTTGGTGTTGTAGGCTGTATCCTGAGGGGTTTCTTCTAGGAGAGTCACTGCCTTCCAAGTGCTaGGATTGCTTCTTTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLSWCCRLYPEGFLLGESLPSKC*DCFFSL Trigger: GAGGGAAAAGAAGCAATCCCAGCACTTGGAAGGCAG...TGACTCTCCTAGAAGAAACCCCTCAGGATACAGCCTACAACACCAAGAGAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| 3UTR CAA 72 bp | GCAGCCAGAGGCTATGCACCTTCATCATCACTTTATTaGTTCCATTTGCTCAAGGGAGCCATGGTGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AARGYAPSSSLY*FHLLKGAMVTA Trigger: TGCTGTCACCATGGCTCCCTTGAGCAAATGGAACAAATAAAGTGATGATGAAGGTGCATAGCCTCTGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR GCA 90 bp | AATACTGGCCACAATACCTCTCTTGGTGTTGTAGGCTGTATCCTGAGGGGTTTCCTGGTTGGCTCTCACTaGAGAAGCAAAAGAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTGHNTSLGVVGCILRGFLVGSH*RSKRRC Trigger: ACACCTTCTTTTGCTTCTGCAGTGAGAGCCAACCAG...GAAACCCCTCAGGATACAGCCTACAACACCAAGAGAGGTATTGTGGCCAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGAAAACCAAAATACTGGCCACAATACCTCTCTTGGTGTTGTAGGCTGTATGGGCACGCCTGCCTCTaGCTTCCAAGTGCTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: IRKPKYWPQYLSWCCRLYGHACL*LPSAGI Trigger: AATCCCAGCACTTGGAAGGCAGAGGCAGGCGTGCCC...ATACAGCCTACAACACCAAGAGAGGTATTGTGGCCAGTATTTTGGTTTTCTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS-3UTR CCA 90 bp | CCTATAGAGGCTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTAAACCGCCAGTAAGCTaGATGAGGTCTGGAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: PIEALFPAQLWTIFFTPLKPPVS*MRSGKW Trigger: CCATTTTCCAGACCTCATCCAGCTTACTGGCGGTTT...AAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAGCCTCTATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | TACTGGCCACAATACCTCTCTTGGTGTTGTAGGCTGTATCCTGAGGGGTTTCTTAAAAGCAGCTCTGGTTaGCTCTCACTGCAGAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: YWPQYLSWCCRLYPEGFLKSSSG*LSLQKQ Trigger: TTGCTTCTGCAGTGAGAGCCAACCAGAGCTGCTTTT...AAGAAACCCCTCAGGATACAGCCTACAACACCAAGAGAGGTATTGTGGCCAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGACTCTAGACCCACCACTTTGCAGACATGTTGGTATTATGATATCCTTCCCAGCCAATGAAGTGTaGAGGAACAAAGCCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLTLDPPLCRHVGIMISFPANEV*RNKAIQ Trigger: CTGGATGGCTTTGTTCCTGCACACTTCATTGGCTGG...GAAGGATATCATAATACCAACATGTCTGCAAAGTGGTGGGTCTAGAGTCAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 72 bp | ACAGCTTTAAGACAAAGCCAGGTAGGAAAATGCCTGTaGCCATTGGTCACCTGGGAACTGCAAATCAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: TALRQSQVGKCL*PLVTWELQIKP Trigger: GGGTTTGATTTGCAGTTCCCAGGTGACCAATGGCAACAGGCATTTTCCTACCTGGCTTTGTCTTAAAGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAGAGGCTCTGTTCCCAGCACAGCTCTGGACTATCTTCTTTACTCCACTTAGAAAACCAAAATACTaGCCACAATACCTCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PIEALFPAQLWTIFFTPLRKPKY*PQYLSW Trigger: CCAAGAGAGGTATTGTGGCCAGTATTTTGGTTTTCT...AAGTGGAGTAAAGAAGATAGTCCAGAGCTGTGCTGGGAACAGAGCCTCTATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 72 bp | AGGAAATGGCTCAGTGCTGACTCTAGACCCACCACTTaGCAGACATGTTGGTATTATGATATCCTTCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: RKWLSADSRPTT*QTCWYYDILHL Trigger: TAAGTGAAGGATATCATAATACCAACATGTCTGCAAAGTGGTGGGTCTAGAGTCAGCACTGAGCCATTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 72 bp | ACTTGCACATTTGCATTCGTGGGAAAATTGAACTTGTaGGCAGACAAATGGTTTGCTACTGCATTCCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: TCTFAFVGKLNL*ADKWFATAFPM Trigger: CATTGGGAATGCAGTAGCAAACCATTTGTCTGCCAACAAGTTCAATTTTCCCACGAATGCAAATGTGCAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 72 bp | ATGACTTGCACATTTGCATTCGTGGGAAAATTGAACTaGTTGGCAGACAAATGGTTTGCTACTGCATTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MTCTFAFVGKLN*LADKWFATAFP Trigger: TGGGAATGCAGTAGCAAACCATTTGTCTGCCAACAAGTTCAATTTTCCCACGAATGCAAATGTGCAAGTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| 3UTR CAA 72 bp | AACCAAAAAGATAACAAATACTGGTCAGAGTTAAAATaGGTTGCTCAGTCTTCTAATTCCACCACTCGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NQKDNKYWSELK*VAQSSNSTTRE Trigger: TTCCCGAGTGGTGGAATTAGAAGACTGAGCAACCAATTTTAACTCTGACCAGTATTTGTTATCTTTTTGGTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS TCA 90 bp | TCTGGCCCAGGGTGCCCATCCCGGTTGTTGACGGCTCTGGCCTGGTaGCTCTGCTGCTTCTGTCGCCGGGTCTCCTTGTACCTCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SGPGCPSRLLTALAW*LCCFCRRVSLYLMV Trigger: CACCATGAGGTACAAGGAGACCCGGCGACAGAAGCAGCAGAGTCACCAGGCCAGAGCCGTCAACAACCGGGATGGGCACCCTGGGCCAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCACAGTCATTTCTCGTGGTTATTCTTCAGCGATCACCAGCCCCACACCCAGTGCTGCGGCGGCCCTaGAGCAGCGGAGACTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSQSFLVVILQRSPAPHPVLRRP*SSGDSD Trigger: ATCTGAGTCTCCGCTGCTCAAGGGCCGCCGCAGCAC...TGGGTGTGGGGCTGGTGATCGCTGAAGAATAACCACGAGAAATGACTGTGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CAA 90 bp | GTGGTCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGTGTCGCCGGGTCTCCTaGTACCTCATGGTGATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVTAARELEENNGGTWGWCRRVS*YLMVMS Trigger: GGACATCACCATGAGGTACAAGGAGACCCGGCGACA...CCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS TCA 90 bp | CAGGATGGAGCCAAGAGTCCAGCACTGGGAGATGTAGAAGGGCAGTaGCAGGGTGAGTGTGTGCGGGTCATACTTCACCACGATGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QDGAKSPALGDVEGQ*QGECVRVILHHDEK Trigger: CTTCTCATCGTGGTGAAGTATGACCCGCACACACTCACCCTGTCACTGCCCTTCTACATCTCCCAGTGCTGGACTCTTGGCTCCATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS CCA 90 bp | TCCATGATCCAATGGTCCCACCAGCACTCGCTGAAGTTGGGCAGCTaGTGCTCCAGGCTGTACTCCAGGAACTCGAACATCACACTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SMIQWSHQHSLKLGS*CSRLYSRNSNITLM Trigger: CATCAGTGTGATGTTCGAGTTCCTGGAGTACAGCCTGGAGCACCAGCTGCCCAACTTCAGCGAGTGCTGGTGGGACCATTGGATCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026568.10 ENSMUST00000172787.8 |
||
| CDS GCA 90 bp | ATGATCCAATGGTCCCACCAGCACTCGCTGAAGTTGGGCAGCTGGTaGTCCAGGCTGTACTCCAGGAACTCGAACATCACACTGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: MIQWSHQHSLKLGSW*SRLYSRNSNITLMI Trigger: GATCATCAGTGTGATGTTCGAGTTCCTGGAGTACAGCCTGGAGCACCAGCTGCCCAACTTCAGCGAGTGCTGGTGGGACCATTGGATCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026568.10 ENSMUST00000172787.8 |
||
| CDS TCA 90 bp | GGCTGGAGGCTGGCTTCCACTCAAAGCGTACCCAGCTGTAAGGCGTaGACTGAAAGGCAATCCTCTTCATCTTGCCCTTGTAGGTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GWRLASTQSVPSCKA*TERQSSSSCPCRLE Trigger: TTCCAACCTACAAGGGCAAGATGAAGAGGATTGCCTTTCAGTTCACGCCTTACAGCTGGGTACGCTTTGAGTGGAAGCCAGCCTCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CAA 90 bp | GAAAACCAAAATACTGGCCACAATACCTCTCTTGGTGTTGTAGGCTGTATCCTGGTGCTGCGGCGGCCCTaGAGCAGCGGAGACTCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: ENQNTGHNTSLGVVGCILVLRRP*SSGDSD Trigger: ATCTGAGTCTCCGCTGCTCAAGGGCCGCCGCAGCAC...CAGGATACAGCCTACAACACCAAGAGAGGTATTGTGGCCAGTATTTTGGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCACAGTCATTTCTCGTGGTTATTCTTCAGCGATCACCAGCCCCACACCCATCTTGCCCTTGTAGGTaGGAATGTTCCAGAGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GSQSFLVVILQRSPAPHPSCPCR*ECSRGP Trigger: AGGGCCTCTGGAACATTCCAACCTACAAGGGCAAGA...TGGGTGTGGGGCTGGTGATCGCTGAAGAATAACCACGAGAAATGACTGTGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS TCA 90 bp | CATGTAAGCACCAGGATGGAGCCAAGAGTCCAGCAAATTCATCCATaGAGTCGTAGATCTCACGCATGGCCACACCACCCACGTTCACGA | + |
|
Preference number: 5 (lower is better) Translates to: HVSTRMEPRVQQIHP*SRRSHAWPHHPRSR Trigger: TCGTGAACGTGGGTGGTGTGGCCATGCGTGAGATCTACGACTTCATGGATGAATTTGCTGGACTCTTGGCTCCATCCTGGTGCTTACATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| CDS-3UTR CAA 90 bp | TCACAGCAGCCAGAGAGTTGGAGGAAAACAACGGAGGTACATGGGGGTGGACAGACAAAGCCATCCAGCTaGTCCCAGATGTTGTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SQQPESWRKTTEVHGGGQTKPSS*SQMLWK Trigger: TTTCCACAACATCTGGGACAAGCTGGATGGCTTTGT...CTGTCCACCCCCATGTACCTCCGTTGTTTTCCTCCAACTCTCTGGCTGCTGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CAA 90 bp | ACTGGCCACAATACCTCTCTTGGTGTTGTAGGCTGTATCCTGAGGGGTTTCTTCGAAAAGCAGCTCTGGTaGGCTCTCACTGCAGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGHNTSLGVVGCILRGFFEKQLW*ALTAEA Trigger: TGCTTCTGCAGTGAGAGCCAACCAGAGCTGCTTTTC...GAAGAAACCCCTCAGGATACAGCCTACAACACCAAGAGAGGTATTGTGGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS-3UTR CAA 90 bp | AAGGGCAGCCAGAGGCTATGCACCTTCATCATCACTTTATTTGTTCCATTTGCTAGCTTGTCCCAGATGTaGTGGAAAGGGTCAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KGSQRLCTFIITLFVPFASLSQM*WKGSVL Trigger: CAAGACTGACCCTTTCCACAACATCTGGGACAAGCT...AGCAAATGGAACAAATAAAGTGATGATGAAGGTGCATAGCCTCTGGCTGCCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS-3UTR CAA 90 bp | TACTGGCCACAATACCTCTCTTGGTGTTGTAGGCTGTATCCTGAGGGGTTTCTTTTAGACGGAATCATATaGAAAAGCAGCTCTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: YWPQYLSWCCRLYPEGFLLDGII*KSSSGW Trigger: CCAACCAGAGCTGCTTTTCAATATGATTCCGTCTAA...AAGAAACCCCTCAGGATACAGCCTACAACACCAAGAGAGGTATTGTGGCCAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS TCA 72 bp | CGTCGTAGACTTCAGACTCGGTGCTGCGGCGGCCCTTaGGCAGCGGAGACTCAGATCCCGAGCCTCCGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RRRLQTRCCGGP*AAETQIPSLRR Trigger: TCGCCGGAGGCTCGGGATCTGAGTCTCCGCTGCTCAAGGGCCGCCGCAGCACCGAGTCTGAAGTCTACGACG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026568.10 ENSMUST00000174058.8 |
||
| CDS TCA 72 bp | GCTGGCCCAGCTTCCTGTGGGGCTTCAATTCATCCATaGAGTCGTAGATCTCACGCATGGCCACACCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGPASCGASIHP*SRRSHAWPHHP Trigger: TGGGTGGTGTGGCCATGCGTGAGATCTACGACTTCATGGATGAATTGAAGCCCCACAGGAAGCTGGGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS TCA 72 bp | ACCAGGATGGAGCCAAGAGTCCAGCAAATTCATCCATaGAGTCGTAGATCTCACGCATGGCCACACCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: TRMEPRVQQIHP*SRRSHAWPHHP Trigger: TGGGTGGTGTGGCCATGCGTGAGATCTACGACTTCATGGATGAATTTGCTGGACTCTTGGCTCCATCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209928.2 |
||
| CDS TCA 72 bp | CTGGCTTCCACTCAAAGCGTACCCAGCTGTAAGGCGTaGACTGAAAGGCAATCCTCTTCATCTTGCCCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: LASTQSVPSCKA*TERQSSSSCPC Trigger: ACAAGGGCAAGATGAAGAGGATTGCCTTTCAGTTCACGCCTTACAGCTGGGTACGCTTTGAGTGGAAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026568.10 |
||
| CDS CCA 72 bp | TCATTAGACGGAATCATATTGAAAAGCAGCTCTGGTTaGCTCTCACTGCAGAAGCAAAAGAAGGTGTTAGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLDGIILKSSSG*LSLQKQKKVLV Trigger: CACTAACACCTTCTTTTGCTTCTGCAGTGAGAGCCAACCAGAGCTGCTTTTCAATATGATTCCGTCTAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS CCA 72 bp | ACAGTCATTAGACGGAATCATATTGAAAAGCAGCTCTaGTTGGCTCTCACTGCAGAAGCAAAAGAAGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: TVIRRNHIEKQL*LALTAEAKEGV Trigger: AACACCTTCTTTTGCTTCTGCAGTGAGAGCCAACCAGAGCTGCTTTTCAATATGATTCCGTCTAATGACTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS CAA 72 bp | GTCATTAGACGGAATCATATTGAAAAGCAGCTCTGGTaGGCTCTCACTGCAGAAGCAAAAGAAGGTGTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: VIRRNHIEKQLW*ALTAEAKEGVS Trigger: ACTAACACCTTCTTTTGCTTCTGCAGTGAGAGCCAACCAGAGCTGCTTTTCAATATGATTCCGTCTAATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||
| CDS CAA 72 bp | CCTCTAATGTTTTCACAGTCATTAGACGGAATCATATaGAAAAGCAGCTCTGGTTGGCTCTCACTGCAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLMFSQSLDGII*KSSSGWLSLQK Trigger: CTTCTGCAGTGAGAGCCAACCAGAGCTGCTTTTCAATATGATTCCGTCTAATGACTGTGAAAACATTAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174058.8 |
||