Pregenerated sensors for PTDSS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021518Ensembl transcript IDs: ENSMUST00000021990.4, ENSMUST00000224244.2, ENSMUST00000224290.2, ENSMUST00000225347.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAAAGGACCCCGAGCCATGGTCAGCCTAGTGTGTGTCCAGGTCTATaGGAGACAAGACTTACACTCTCAAGTCACGATCCCCTAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: QRTPSHGQPSVCPGL*ETRLTLSSHDPLSS Trigger: GGAGCTTAGGGGATCGTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGGCTGACCATGGCTCGGGGTCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR CCA 90 bp | GGCTGGGGTCATCTGCCATGTGGCTGGGGACTGAGTATGCTTAGCTaGGACACCAAAGCTCCTTCCACCCTTTGTTTCTCTAGAAGGAAC | + |
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Preference number: 1 (lower is better) Translates to: GWGHLPCGWGLSMLS*DTKAPSTLCFSRRN Trigger: GTTCCTTCTAGAGAAACAAAGGGTGGAAGGAGCTTTGGTGTCCCAGCTAAGCATACTCAGTCCCCAGCCACATGGCAGATGACCCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR GCA 90 bp | TTGCCCAGTGGTAAGTTCTCATCTCCAGAAACCGGCAAACGACCATaGCCAGCCAGATTCCACCACCATTGCACAACAGGATGTCCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LPSGKFSSPETGKRP*PARFHHHCTTGCPE Trigger: TTCTGGACATCCTGTTGTGCAATGGTGGTGGAATCTGGCTGGGCATGGTCGTTTGCCGGTTTCTGGAGATGAGAACTTACCACTGGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR TCA 90 bp | AGAATGCCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTTGCTTaGATGCTTCGGTGGGCTGTCTTCAGAACCTTTGGAGCCTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: RMPVPSSGRMAFVVA*MLRWAVFRTFGAFP Trigger: GGGAAAGGCTCCAAAGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR CCA 90 bp | AGCCAGATTCCACCACCATTGCACAACAGGATGTCCAGAATGACTTaGTCCCACCAGCACTCAGCAAAATTGGGCAGGAGATGCATGAAG | + |
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Preference number: 1 (lower is better) Translates to: SQIPPPLHNRMSRMT*SHQHSAKLGRRCMK Trigger: CTTCATGCATCTCCTGCCCAATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAATGGTGGTGGAATCTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR GCA 90 bp | CTTTGGAGCCTTTCCCATGATGCCAGGAGATCTCTGGACTGTAAGTaGCATCTTCACACTCTGAATAGGTCTTTTCCCGGTGACCATAGT | + |
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Preference number: 1 (lower is better) Translates to: LWSLSHDARRSLDCK*HLHTLNRSFPGDHS Trigger: ACTATGGTCACCGGGAAAAGACCTATTCAGAGTGTGAAGATGGCACTTACAGTCCAGAGATCTCCTGGCATCATGGGAAAGGCTCCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR CCA 90 bp | GCCGTAATGCAGCCGATGAAGAGGATTCTACCCCAGCTTAAGGGATaGCTGGCTTGGAACACAAAGATGTGCTTCAAGAAGAAGGTATTC | + |
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Preference number: 1 (lower is better) Translates to: AVMQPMKRILPQLKG*LAWNTKMCFKKKVF Trigger: GAATACCTTCTTCTTGAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTTAAGCTGGGGTAGAATCCTCTTCATCGGCTGCATTACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
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| 3UTR CCA 90 bp | TTGGACTTAGAATGCCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTaGTTGCTTGAATGCTTCGGTGGGCTGTCTTCAGAACCTTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: LDLECRFLLLEEWLS*LLECFGGLSSEPLE Trigger: CTCCAAAGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR CCA 90 bp | CAGCCGATGAAGAGGATTCTACCCCAGCTTAAGGGATGGCTGGCTTaGAACACAAAGATGTGCTTCAAGAAGAAGGTATTCAACTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: QPMKRILPQLKGWLA*NTKMCFKKKVFNSV Trigger: GACTGAGTTGAATACCTTCTTCTTGAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTTAAGCTGGGGTAGAATCCTCTTCATCGGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
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| 3UTR GCA 90 bp | ACGGATCAACAAGGCCTTCATGGCCCAGCCCCAGAAATGGCCAAATaGAAATATATCAAAGTGACTAACGATTCTCTCCCAGGTTATCAC | + |
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Preference number: 1 (lower is better) Translates to: TDQQGLHGPAPEMAK*KYIKVTNDSLPGYH Trigger: GTGATAACCTGGGAGAGAATCGTTAGTCACTTTGATATATTTGCATTTGGCCATTTCTGGGGCTGGGCCATGAAGGCCTTGTTGATCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR TCA 90 bp | CCAAGCGACCAGTTCATTAGCCAGTTAGTTAAGTCAACATCTGAATaGAGACATTTATACAACATCCACAAGACACACCAGCAGAGAGCC | + |
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Preference number: 1 (lower is better) Translates to: PSDQFISQLVKSTSE*RHLYNIHKTHQQRA Trigger: GGCTCTCTGCTGGTGTGTCTTGTGGATGTTGTATAAATGTCTTCATTCAGATGTTGACTTAACTAACTGGCTAATGAACTGGTCGCTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR GCA 90 bp | TTCCTTCATTTCTTTCCAACTCCATTAGTGACTTTGGACTTAGAATaGCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTTGCTTGAA | + |
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Preference number: 1 (lower is better) Translates to: FLHFFPTPLVTLDLE*RFLLLEEWLSWLLE Trigger: TTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAAAGTCACTAATGGAGTTGGAAAGAAATGAAGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR TCA 90 bp | GCAGCAGGATTGTTTGTAGCAAGTTTGTTTTACAGCCCACTTGTCTaGGAAAGAAAATCCAACCTAGTAAGTAAGACCATAGTGACAGAC | + |
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Preference number: 1 (lower is better) Translates to: AAGLFVASLFYSPLV*ERKSNLVSKTIVTD Trigger: GTCTGTCACTATGGTCTTACTTACTAGGTTGGATTTTCTTTCTCAGACAAGTGGGCTGTAAAACAAACTTGCTACAAACAATCCTGCTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCGAGGCTCCAGTGCCAGCAGCCAGCCTCTTCACTCCGGCTGGGGTCATCTGCCAGCAGAGAGCCACTaGTGGCAGCTGGGAATAAAC | + |
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Preference number: 2 (lower is better) Translates to: SRGSSASSQPLHSGWGHLPAESH*WQLGIN Trigger: GTTTATTCCCAGCTGCCAGCAGTGGCTCTCTGCTGG...CAGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTGGAGCCTCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTGGGTCATCTGCCATGTaGCTGGGGACTGAGTATGCT | + |
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Preference number: 2 (lower is better) Translates to: KGPWQGAPLSQIRSQGRSGSSAM*LGTEYA Trigger: AGCATACTCAGTCCCCAGCCACATGGCAGATGACCC...AGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGAGGCTCCAGTGCCAGCAGCCAGCCTCTTCACTCCGGCTGGGGTCATCTGGTGACCATAGTGCTCTaGATACCAAACCATGCCGTA | + |
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Preference number: 2 (lower is better) Translates to: SRGSSASSQPLHSGWGHLVTIVL*IPNHAV Trigger: TACGGCATGGTTTGGTATGCAGAGCACTATGGTCAC...CAGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTGGAGCCTCGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTTGTGCACTCAGTCGCAGAGAGCCACTGCTaGCAGCTGGGAATAAACAGC | + |
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Preference number: 2 (lower is better) Translates to: REPHCPRSARKVVLVHSVAESHC*QLGINS Trigger: GCTGTTTATTCCCAGCTGCCAGCAGTGGCTCTCTGC...GACTGAGTGCACAAGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTTGTGCACTCAGTCTGGTGTGGATGTCCTTaGAGCTTGCCCAGTGGTAAG | + |
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Preference number: 2 (lower is better) Translates to: REPHCPRSARKVVLVHSVWCGCP*SLPSGK Trigger: CTTACCACTGGGCAAGCTTCAAGGACATCCACACCA...GACTGAGTGCACAAGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGAGGCTCCAGTGCCAGCAGCCAGCCTCTTCACTCCGGCTGGGGTCATCTGAGGAAGGTCCAAATATaGTGTTTTCCTCTCGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: SRGSSASSQPLHSGWGHLRKVQI*CFPLGS Trigger: AGACCCGAGAGGAAAACAGCATATTTGGACCTTCCT...CAGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTGGAGCCTCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR-3UTR GCA 90 bp | AGCCGAGGCTCCAGTGCCAGCAGCCAGCCTCTTCACTCCGGCTGGGGTCATCTGAAATTGGGCAGGAGATaGATGAAGAAAAGTTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: SRGSSASSQPLHSGWGHLKLGRR*MKKSWN Trigger: GTTCCAACTTTTCTTCATGCATCTCCTGCCCAATTT...CAGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTGGAGCCTCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR CAA 90 bp | TCCAGAAACCGGCAAACGACCATGCCCAGCCAGATTCCACCACCATaGCACAACAGGATGTCCAGAATGACTTGGTCCCACCAGCACTCA | + |
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Preference number: 2 (lower is better) Translates to: SRNRQTTMPSQIPPP*HNRMSRMTWSHQHS Trigger: TGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAATGGTGGTGGAATCTGGCTGGGCATGGTCGTTTGCCGGTTTCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTTCTCTGGACTGTAAGTaGCATCTTCACACTCTGAAT | + |
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Preference number: 2 (lower is better) Translates to: KGPWQGAPLSQIRSQGRSSLDCK*HLHTLN Trigger: ATTCAGAGTGTGAAGATGGCACTTACAGTCCAGAGA...AGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | GCATACCAAACCATGCCGTACAGACACAGGAACGTGGTGAAGGCCACACAAAGATGCACTGTGTGTCCGTaGGGTAGGCATAGTACTGTC | + |
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Preference number: 2 (lower is better) Translates to: AYQTMPYRHRNVVKATQRCTVCP*GRHSTV Trigger: GACAGTACTATGCCTACCTCACGGACACACAGTGCA...TCTTTGTGTGGCCTTCACCACGTTCCTGTGTCTGTACGGCATGGTTTGGTATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
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| 3UTR-3UTR GCA 90 bp | TTCAGAACCTTTGGAGCCTTTCCCATGATGCCAGGAGATCTCTGGACTGTAAGTACCGGCAAACGACCATaGCCAGCCAGATTCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: FRTFGAFPMMPGDLWTVSTGKRP*PARFHH Trigger: GTGGTGGAATCTGGCTGGGCATGGTCGTTTGCCGGT...ACTTACAGTCCAGAGATCTCCTGGCATCATGGGAAAGGCTCCAAAGGTTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR CAA 90 bp | CAGCCAGATTCCACCACCATTGCACAACAGGATGTCCAGAATGACTaGGTCCCACCAGCACTCAGCAAAATTGGGCAGGAGATGCATGAA | + |
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Preference number: 2 (lower is better) Translates to: QPDSTTIAQQDVQND*VPPALSKIGQEMHE Trigger: TTCATGCATCTCCTGCCCAATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAATGGTGGTGGAATCTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | CACTCTCTGAAAGGAAGACTTGGGATCAAACCACCTGACGTAAGTCCAGCTAGCCTTCCAGGAAACCAATaGCCCCAAACACCCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: HSLKGRLGIKPPDVSPASLPGNQ*PQTPST Trigger: AGTGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAAG...GCTAGCTGGACTTACGTCAGGTGGTTTGATCCCAAGTCTTCCTTTCAGAGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | ATACCAAACCATGCCGTACAGACACAGGAACGTGGTGAAGGCCACACAAAGAAGCTTCCAGGAAACCAATaGCCCCAAACACCCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: IPNHAVQTQERGEGHTKKLPGNQ*PQTPST Trigger: AGTGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAAG...CTTCTTTGTGTGGCCTTCACCACGTTCCTGTGTCTGTACGGCATGGTTTGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTCCATGGAAACTCATACACACAGGGAGAAGGCCACCTCTGTCAGCTCCCAGGAAGGTCCAAATATaGTGTTTTCCTCTCGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: CSPWKLIHTGRRPPLSAPRKVQI*CFPLGS Trigger: AGACCCGAGAGGAAAACAGCATATTTGGACCTTCCT...GGGAGCTGACAGAGGTGGCCTTCTCCCTGTGTGTATGAGTTTCCATGGACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR CAA 90 bp | GACTTAGAATGCCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTaGCTTGAATGCTTCGGTGGGCTGTCTTCAGAACCTTTGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: DLECRFLLLEEWLSW*LECFGGLSSEPLEP Trigger: AGGCTCCAAAGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | TTCAGAACCTTTGGAGCCTTTCCCATGATGCCAGGAGATCTCTGGACTGTAAGTACAGGATGTCCAGAATaGCTTGGTCCCACCAGCACT | + |
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Preference number: 2 (lower is better) Translates to: FRTFGAFPMMPGDLWTVSTGCPE*LGPTST Trigger: AGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGT...ACTTACAGTCCAGAGATCTCCTGGCATCATGGGAAAGGCTCCAAAGGTTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTTGTGCACTCAGTCGTACATTATGATCTCTaGATAGGAAGGTCCAAATAT | + |
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Preference number: 2 (lower is better) Translates to: REPHCPRSARKVVLVHSVVHYDL*IGRSKY Trigger: ATATTTGGACCTTCCTATGCAGAGATCATAATGTAC...GACTGAGTGCACAAGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACAACAGGATGTCCAGAATGACTTGGTCCCACCAGCACTCAGCAAAATTTCAACAAGGCCTTCATaGCCCAGCCCCAGAAATGGC | + |
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Preference number: 2 (lower is better) Translates to: IAQQDVQNDLVPPALSKISTRPS*PSPRNG Trigger: GCCATTTCTGGGGCTGGGCCATGAAGGCCTTGTTGA...AATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR CAA 90 bp | AACAGGATGTCCAGAATGACTTGGTCCCACCAGCACTCAGCAAAATaGGGCAGGAGATGCATGAAGAAAAGTTGGAACTGTAGTCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: NRMSRMTWSHQHSAK*GRRCMKKSWNCSRC Trigger: GCAGCGACTACAGTTCCAACTTTTCTTCATGCATCTCCTGCCCAATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACATCATCGTGCTTTGGTaGGTGAGCAGCAGGATTGTT | + |
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Preference number: 2 (lower is better) Translates to: QPSVCPGLWETRLTLSSHIIVLW*VSSRIV Trigger: AACAATCCTGCTGCTCACTCACCAAAGCACGATGAT...GTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| 3UTR-3UTR CCA 90 bp | ATACCAAACCATGCCGTACAGACACAGGAACGTGGTGAAGGCCACACAAAGAAGAAGGGATGGCTGGCTTaGAACACAAAGATGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: IPNHAVQTQERGEGHTKKKGWLA*NTKMCF Trigger: GAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTT...CTTCTTTGTGTGGCCTTCACCACGTTCCTGTGTCTGTACGGCATGGTTTGGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
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| 3UTR-3UTR CCA 90 bp | TATGCAAACAATAGCTTCCAGGAAACCAATGACCCCAAACACCCAGCACTGTGTCCCCAGCTTAAGGGATaGCTGGCTTGGAACACAAAG | + |
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Preference number: 2 (lower is better) Translates to: YANNSFQETNDPKHPALCPQLKG*LAWNTK Trigger: CTTTGTGTTCCAAGCCAGCCATCCCTTAAGCTGGGG...ACACAGTGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAAGCTATTGTTTGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGACTTAGAATGCCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTTGCTTTTCCCTGTGGTGGTGTaGATGTCCTTGAAGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LDLECRFLLLEEWLSWLLFPVVV*MSLKLA Trigger: GGCAAGCTTCAAGGACATCCACACCACCACAGGGAA...AAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR CCA 90 bp | ATACCCACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAAAAACCAAGCACATaGAAAAGGACCCTGGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: IPTSTSHEPERQSRQNITEKPST*KRTLAG Trigger: CCCTGCCAGGGTCCTTTTCCATGTGCTTGGTTTTTC...TGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| 3UTR-3UTR CCA 90 bp | AGGATTCTACCCCAGCTTAAGGGATGGCTGGCTTGGAACACAAAGATGTGCTTCTCTGAAAGGAAGACTTaGGATCAAACCACATCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RILPQLKGWLAWNTKMCFSERKT*DQTTSG Trigger: CCCTGATGTGGTTTGATCCCAAGTCTTCCTTTCAGA...GAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTTAAGCTGGGGTAGAATCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225347.2 |
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| 3UTR-3UTR CCA 90 bp | CCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACGATAAGGGATGGCTGGCTTaGAACACAAAGATGTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: PSVCPGLWETRLTLSSHDKGWLA*NTKMCF Trigger: GAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTT...ATCGTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGAACCTTTGGAGCCTTTCCCATGATGCCAGGAGATCTCTGGACTGTAAGTATGCCAGGAGATCTCTaGACTGTAAGTGCCATCTTC | + |
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Preference number: 2 (lower is better) Translates to: FRTFGAFPMMPGDLWTVSMPGDL*TVSAIF Trigger: GAAGATGGCACTTACAGTCCAGAGATCTCCTGGCAT...ACTTACAGTCCAGAGATCTCCTGGCATCATGGGAAAGGCTCCAAAGGTTCTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | TATGCAAACAATAGCTTCCAGGAAACCAATGACCCCAAACACCCAGCACTGTGTATACCAGCCACTCTCTaGAAGGAAGACTTGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: YANNSFQETNDPKHPALCIPATL*KEDLGS Trigger: TGATCCCAAGTCTTCCTTTCAGAGAGTGGCTGGTAT...ACACAGTGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAAGCTATTGTTTGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAGGAAAAACCAATACCAGCCACTCTCTaGAAGGAAGACTTGGGATCA | + |
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Preference number: 2 (lower is better) Translates to: TSHEPERQSRQNITEEKPIPATL*KEDLGS Trigger: TGATCCCAAGTCTTCCTTTCAGAGAGTGGCTGGTAT...TGGTTTTTCCTCTGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGCACAACAGGATGTCCAGAATGACTTGGTCCCACCAGCACTCAGCAAAATTAGCTTAAGGGATGGCTaGCTTGGAACACAAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: IAQQDVQNDLVPPALSKISLRDG*LGTQRC Trigger: ACATCTTTGTGTTCCAAGCCAGCCATCCCTTAAGCT...AATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACGATGTCAACTGCAAAATATaGACTTGCCTCCAAGTAGTT | + |
|
Preference number: 2 (lower is better) Translates to: PSVCPGLWETRLTLSSHDVNCKI*TCLQVV Trigger: AACTACTTGGAGGCAAGTTCATATTTTGCAGTTGAC...ATCGTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCAGAGACTCTTCCAGTTaGCAAAGGACCCCGAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: SKSRLSELKQSIKWTGRLRDSSS*QRTPSH Trigger: ATGGCTCGGGGTCCTTTGCCAACTGGAAGAGTCTCT...GAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTTCATTTCTTTCCAACTCCATTAGTGACTTTGGACTTAGAATGCCGGTTTCCCAGGTTATCACATaGCAGTTCACAGCATACTCC | + |
|
Preference number: 2 (lower is better) Translates to: LPSFLSNSISDFGLRMPVSQVIT*QFTAYS Trigger: GGAGTATGCTGTGAACTGTCATGTGATAACCTGGGA...AACCGGCATTCTAAGTCCAAAGTCACTAATGGAGTTGGAAAGAAATGAAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR CCA 90 bp | GTACATTATGATCTCTGCATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTTGCATGAAGAAAAGTTaGAACTGTAGTCGCTGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VHYDLCIGRSKYAVFLSGCMKKS*NCSRCS Trigger: GCTGCAGCGACTACAGTTCCAACTTTTCTTCATGCA...ACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR CCA 90 bp | CTTCCTTCATTTCTTTCCAACTCCATTAGTGACTTTGGACTTAGAATGCCGGTTAGTCTGGACAGTGTCTaGAAGGGAACAAAACAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LPSFLSNSISDFGLRMPVSLDSV*KGTKQF Trigger: GAACTGTTTTGTTCCCTTCCAGACACTGTCCAGACT...AACCGGCATTCTAAGTCCAAAGTCACTAATGGAGTTGGAAAGAAATGAAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCACACTCTGAATAGGTCTTTTCCCGGTGACCATAGTGCTCTGCATACCAAATCATGTCCTTATAAATaGAGTCCATGGAAACTCATA | + |
|
Preference number: 2 (lower is better) Translates to: LHTLNRSFPGDHSALHTKSCPYK*SPWKLI Trigger: TATGAGTTTCCATGGACTGCATTTATAAGGACATGA...TTTGGTATGCAGAGCACTATGGTCACCGGGAAAAGACCTATTCAGAGTGTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAATACCCACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCCCAGAAATGGCCAAATaGAAATATATCAAAGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LIPTSTSHEPERQSRQNIPEMAK*KYIKVT Trigger: AGTCACTTTGATATATTTGCATTTGGCCATTTCTGG...GATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR CAA 90 bp | AAGCCAAAGCATCACATAGAGTATCTGGGTCTTAGAAAAGAGATCTaGTCCAAATTTTATGCAAACAATAGCTTCCAGGAAACCAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: KPKHHIEYLGLRKEI*SKFYANNSFQETND Trigger: GTCATTGGTTTCCTGGAAGCTATTGTTTGCATAAAATTTGGACAAGATCTCTTTTCTAAGACCCAGATACTCTATGTGATGCTTTGGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
||
| 3UTR-3UTR GCA 90 bp | CCCCAATTTCAGCAGTGGATTCTGGAAGCTTTGAAGCTATTTAACTCAAAAACAGTACATTATGATCTCTaGATAGGAAGGTCCAAATAT | + |
|
Preference number: 2 (lower is better) Translates to: PQFQQWILEALKLFNSKTVHYDL*IGRSKY Trigger: ATATTTGGACCTTCCTATGCAGAGATCATAATGTAC...TGTTTTTGAGTTAAATAGCTTCAAAGCTTCCAGAATCCACTGCTGAAATTGGGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | GGCTCCAGTGCCAGCAGCCAGCCTCTTCACTCCGGCTaGGGTCATCTGCCATGTGGCTGGGGACTGAGTATG | + |
|
Preference number: 3 (lower is better) Translates to: GSSASSQPLHSG*GHLPCGWGLSM Trigger: CATACTCAGTCCCCAGCCACATGGCAGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTGGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR TCA 72 bp | AGCACTGTGTCCCTACACGCTTGCACTGTGTGTCCGTaGGGTAGGCATAGTACTGTCTCACTGTGGGAGCCG | + |
|
Preference number: 3 (lower is better) Translates to: STVSLHACTVCP*GRHSTVSLWEP Trigger: CGGCTCCCACAGTGAGACAGTACTATGCCTACCTCACGGACACACAGTGCAAGCGTGTAGGGACACAGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
||
| 3UTR-3UTR CAA 90 bp | GCATACCAAACCATGCCGTACAGACACAGGAACGTGGTGAAGGCCACACAAAGATGTGTCCCTACACGCTaGCACTGTGTGTCCGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AYQTMPYRHRNVVKATQRCVPTR*HCVSVR Trigger: CCTCACGGACACACAGTGCAAGCGTGTAGGGACACA...TCTTTGTGTGGCCTTCACCACGTTCCTGTGTCTGTACGGCATGGTTTGGTATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
||
| 3UTR TCA 72 bp | GGACAGTGTCTGGAAGGGAACAAAACAGTTCTAATCTaGAGCCGAGGCTCCAGTGCCAGCAGCCAGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GQCLEGNKTVLI*SRGSSASSQPL Trigger: AAGAGGCTGGCTGCTGGCACTGGAGCCTCGGCTTCAGATTAGAACTGTTTTGTTCCCTTCCAGACACTGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | CCGAGCCATGGTCAGCCTAGTGTGTGTCCAGGTCTATaGGAGACAAGACTTACACTCTCAAGTCACGATCCC | + |
|
Preference number: 3 (lower is better) Translates to: PSHGQPSVCPGL*ETRLTLSSHDP Trigger: GGGATCGTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGGCTGACCATGGCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR GCA 72 bp | GGTAAGTTCTCATCTCCAGAAACCGGCAAACGACCATaGCCAGCCAGATTCCACCACCATTGCACAACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GKFSSPETGKRP*PARFHHHCTTG Trigger: TCCTGTTGTGCAATGGTGGTGGAATCTGGCTGGGCATGGTCGTTTGCCGGTTTCTGGAGATGAGAACTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | CAACATCCACAAGACACACCAGCAGAGAGCCACTGCTaGCAGCTGGGAATAAACAGCTATCCTGTCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: QHPQDTPAESHC*QLGINSYPVLP Trigger: TGGAAGGACAGGATAGCTGTTTATTCCCAGCTGCCAGCAGTGGCTCTCTGCTGGTGTGTCTTGTGGATGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | CATCTGCCATGTGGCTGGGGACTGAGTATGCTTAGCTaGGACACCAAAGCTCCTTCCACCCTTTGTTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HLPCGWGLSMLS*DTKAPSTLCFS Trigger: AGAGAAACAAAGGGTGGAAGGAGCTTTGGTGTCCCAGCTAAGCATACTCAGTCCCCAGCCACATGGCAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | CCACCACCATTGCACAACAGGATGTCCAGAATGACTTaGTCCCACCAGCACTCAGCAAAATTGGGCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPPLHNRMSRMT*SHQHSAKLGRR Trigger: TCTCCTGCCCAATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAATGGTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGGACTTAGAATGCCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTTGCTTGATGTCCAGAATGACTaGGTCCCACCAGCACTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: LDLECRFLLLEEWLSWLLDVQND*VPPALS Trigger: GCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATC...AAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR TCA 72 bp | CCCACCAGCACTCAGCAAAATTGGGCAGGAGATGCATaGAGAAAAGTTGGAACTGTAGTCGCTGCAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: PTSTQQNWAGDA*RKVGTVVAAAV Trigger: TACTGCTGCAGCGACTACAGTTCCAACTTTTCTTCATGCATCTCCTGCCCAATTTTGCTGAGTGCTGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR GCA 72 bp | ATACAACATCCACAAGACACACCAGCAGAGAGCCACTaGTGGCAGCTGGGAATAAACAGCTATCCTGTCCTT | + |
|
Preference number: 3 (lower is better) Translates to: IQHPQDTPAESH*WQLGINSYPVL Trigger: AAGGACAGGATAGCTGTTTATTCCCAGCTGCCAGCAGTGGCTCTCTGCTGGTGTGTCTTGTGGATGTTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR GCA 72 bp | CTTCTTCTGGAAGAATGGCTTTCGTGGTTGCTTGAATaGTTCGGTGGGCTGTCTTCAGAACCTTTGGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LLLEEWLSWLLE*FGGLSSEPLEP Trigger: AGGCTCCAAAGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | CAGCCGATGAAGAGGATTCTACCCCAGCTTAAGGGATaGCTGGCTTGGAACACAAAGATGTGCTTCAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: QPMKRILPQLKG*LAWNTKMCFKK Trigger: CTTCTTGAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTTAAGCTGGGGTAGAATCCTCTTCATCGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
||
| 3UTR CCA 72 bp | GAATGCCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTaGTTGCTTGAATGCTTCGGTGGGCTGTCTTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: ECRFLLLEEWLS*LLECFGGLSSE Trigger: TTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | TTGGACTTAGAATGCCGGTTCCTTCTTCTGGAAGAATaGCTTTCGTGGTTGCTTGAATGCTTCGGTGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LDLECRFLLLEE*LSWLLECFGGL Trigger: CAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR TCA 72 bp | GTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTTGCTTaGATGCTTCGGTGGGCTGTCTTCAGAACCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VPSSGRMAFVVA*MLRWAVFRTFG Trigger: TCCAAAGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR GCA 72 bp | CTTTCCCATGATGCCAGGAGATCTCTGGACTGTAAGTaGCATCTTCACACTCTGAATAGGTCTTTTCCCGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSHDARRSLDCK*HLHTLNRSFPG Trigger: ACCGGGAAAAGACCTATTCAGAGTGTGAAGATGGCACTTACAGTCCAGAGATCTCCTGGCATCATGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGCCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACACTCCATTAGTGACTTaGGACTTAGAATGCCGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QPSVCPGLWETRLTLSSHTPLVT*DLECRF Trigger: GAACCGGCATTCTAAGTCCAAAGTCACTAATGGAGT...GTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | AGCAAAGCCCATAACTACGGATCAACAAGGCCTTCATaGCCCAGCCCCAGAAATGGCCAAATGCAAATATAT | + |
|
Preference number: 3 (lower is better) Translates to: SKAHNYGSTRPS*PSPRNGQMQIY Trigger: ATATATTTGCATTTGGCCATTTCTGGGGCTGGGCCATGAAGGCCTTGTTGATCCGTAGTTATGGGCTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR CAA 90 bp | GTACATTATGATCTCTGCATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTTTCCAGCACACTGTATaGCTACCAGAGAATGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VHYDLCIGRSKYAVFLSGFQHTV*LPENAG Trigger: GCCTGCATTCTCTGGTAGCAATACAGTGTGCTGGAA...ACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR GCA 72 bp | AGGAGATGCATGAAGAAAAGTTGGAACTGTAGTCGCTaGAGCAGTAGCAACTTAAGCAGGGTTCACACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: RRCMKKSWNCSR*SSSNLSRVHTE Trigger: TTCAGTGTGAACCCTGCTTAAGTTGCTACTGCTGCAGCGACTACAGTTCCAACTTTTCTTCATGCATCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR CCA 72 bp | TCAGCAAAATTGGGCAGGAGATGCATGAAGAAAAGTTaGAACTGTAGTCGCTGCAGCAGTAGCAACTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SAKLGRRCMKKS*NCSRCSSSNLS Trigger: GCTTAAGTTGCTACTGCTGCAGCGACTACAGTTCCAACTTTTCTTCATGCATCTCCTGCCCAATTTTGCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTAACGATTCTCTCCCAGGTTATCACATGACAGTTCACAGCATACTCCATGTAGCATATCGAAGATaGGGATCCAGCCAATACATC | + |
|
Preference number: 3 (lower is better) Translates to: VTNDSLPGYHMTVHSILHVAYRR*GSSQYI Trigger: GATGTATTGGCTGGATCCCAATCTTCGATATGCTAC...ATGGAGTATGCTGTGAACTGTCATGTGATAACCTGGGAGAGAATCGTTAGTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000224290.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCGAATGGCTTTCGTGGTaGCTTGAATGCTTCGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SKSRLSELKQSIKWTGRLEWLSW*LECFGG Trigger: CCCACCGAAGCATTCAAGCAACCACGAAAGCCATTC...GAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR GCA 72 bp | TTCTTTCCAACTCCATTAGTGACTTTGGACTTAGAATaGCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: FFPTPLVTLDLE*RFLLLEEWLSW Trigger: CCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCATTCTAAGTCCAAAGTCACTAATGGAGTTGGAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR TCA 72 bp | CATATGATCATGAAGAGGTATATACCAGCCACTCTCTaGAAGGAAGACTTGGGATCAAACCACATCAGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: HMIMKRYIPATL*KEDLGSNHIRD Trigger: ATCCCTGATGTGGTTTGATCCCAAGTCTTCCTTTCAGAGAGTGGCTGGTATATACCTCTTCATGATCATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225347.2 |
||
| 3UTR TCA 72 bp | GAGGCAAAGAAACAGAAATCATCGTGCTTTGGTGAGTaGGCAGCAGGATTGTTTGTAGCAAGTTTGTTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: EAKKQKSSCFGE*AAGLFVASLFY Trigger: GTAAAACAAACTTGCTACAAACAATCCTGCTGCTCACTCACCAAAGCACGATGATTTCTGTTTCTTTGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| 3UTR GCA 72 bp | ATGTGCTTCAAGAAGAAGGTATTCAACTCAGTCAACTaGCATATGATCATGAAGAGGTATATACCAGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: MCFKKKVFNSVN*HMIMKRYIPAT Trigger: AGTGGCTGGTATATACCTCTTCATGATCATATGGCAGTTGACTGAGTTGAATACCTTCTTCTTGAAGCACAT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000225347.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGAAGGTATTCAACTCAGTCAACTGCCATATGATCATGAAGAGGTATATAGTAGCATATCGAAGATaGGGATCCAGCCAATACATC | + |
|
Preference number: 3 (lower is better) Translates to: KKKVFNSVNCHMIMKRYIVAYRR*GSSQYI Trigger: GATGTATTGGCTGGATCCCAATCTTCGATATGCTAC...TATATACCTCTTCATGATCATATGGCAGTTGACTGAGTTGAATACCTTCTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| 3UTR TCA 72 bp | CAGTTCATTAGCCAGTTAGTTAAGTCAACATCTGAATaGAGACATTTATACAACATCCACAAGACACACCAG | + |
|
Preference number: 3 (lower is better) Translates to: QFISQLVKSTSE*RHLYNIHKTHQ Trigger: CTGGTGTGTCTTGTGGATGTTGTATAAATGTCTTCATTCAGATGTTGACTTAACTAACTGGCTAATGAACTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR TCA 72 bp | TTGTTTGTAGCAAGTTTGTTTTACAGCCCACTTGTCTaGGAAAGAAAATCCAACCTAGTAAGTAAGACCATA | + |
|
Preference number: 3 (lower is better) Translates to: LFVASLFYSPLV*ERKSNLVSKTI Trigger: TATGGTCTTACTTACTAGGTTGGATTTTCTTTCTCAGACAAGTGGGCTGTAAAACAAACTTGCTACAAACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | AGCCGAGGCTCCAGTGCCAGCAGCCAGCCTCTTCACTCCGGCTGGGGTCATCTGTTGGAGCCTTTCCCATaGTGCCAGGAGATCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRGSSASSQPLHSGWGHLLEPFP*CQEISG Trigger: TCCAGAGATCTCCTGGCATCATGGGAAAGGCTCCAA...CAGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTGGAGCCTCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | GGAAAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTACAGGATGTCCAGAATaGCTTGGTCCCACCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: GKGPWQGAPLSQIRSQGRTGCPE*LGPTST Trigger: AGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGT...ACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | AAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTGACACAGGAACGTGGTaGAGGCCACACAAAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KGPWQGAPLSQIRSQGRSDTGTW*RPHKEA Trigger: GGCTTCTTTGTGTGGCCTTCACCACGTTCCTGTGTC...AGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR CCA 90 bp | GGAAAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTTCCCTGTGGTGGTGTaGATGTCCTTGAAGCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GKGPWQGAPLSQIRSQGRFPVVV*MSLKLA Trigger: GGCAAGCTTCAAGGACATCCACACCACCACAGGGAA...ACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | AAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTCTGCATACCAAACCATaGCGTACAGACACAGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: KGPWQGAPLSQIRSQGRSLHTKP*RTDTGT Trigger: CGTTCCTGTGTCTGTACGGCATGGTTTGGTATGCAG...AGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | GATTCCACCACCATTGCACAACAGGATGTCCAGAATGACTTGGTCCCACCAGCACCTTGCTCAGAGTCCTaGTCCCCACGCAGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DSTTIAQQDVQNDLVPPAPCSES*SPRRTP Trigger: TGGCGTCCTGCGTGGGGAGCAGGACTCTGAGCAAGG...TGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAATGGTGGTGGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR GCA 90 bp | GTCCGCTTCTCGTGTAGCATATCGAAGATTGGGATCCAGCCAATACATCAGGGACCTTGCTCAGAGTCCTaGTCCCCACGCAGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VRFSCSISKIGIQPIHQGPCSES*SPRRTP Trigger: TGGCGTCCTGCGTGGGGAGCAGGACTCTGAGCAAGG...TCCCTGATGTATTGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000224290.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTGCCCAGCCCCAGAAATaGCCAAATGCAAATATATCA | + |
|
Preference number: 4 (lower is better) Translates to: KGPWQGAPLSQIRSQGRSAQPQK*PNANIS Trigger: TGATATATTTGCATTTGGCCATTTCTGGGGCTGGGC...AGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| 3UTR CAA 72 bp | CGGCAAACGACCATGCCCAGCCAGATTCCACCACCATaGCACAACAGGATGTCCAGAATGACTTGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RQTTMPSQIPPP*HNRMSRMTWSH Trigger: GTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAATGGTGGTGGAATCTGGCTGGGCATGGTCGTTTGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTTGTGCACTCAGTCGAAGAATGGCTTTCGTaGTTGCTTGAATGCTTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: REPHCPRSARKVVLVHSVEEWLS*LLECFG Trigger: ACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTC...GACTGAGTGCACAAGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| 3UTR CAA 72 bp | TCCACCACCATTGCACAACAGGATGTCCAGAATGACTaGGTCCCACCAGCACTCAGCAAAATTGGGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: STTIAQQDVQND*VPPALSKIGQE Trigger: CTCCTGCCCAATTTTGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATCCTGTTGTGCAATGGTGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGCATAGTACTGTCTCACTGTGGGAGCCGTAATGCAGCCGATGAAGAGGATCGCCATAAGGCTGGATaGGGTCGAGTAAATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VGIVLSHCGSRNAADEEDRHKAG*GRVNGP Trigger: TGGTCCATTTACTCGACCTCATCCAGCCTTATGGCG...ATCCTCTTCATCGGCTGCATTACGGCTCCCACAGTGAGACAGTACTATGCCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225347.2 |
||
| CDS-3UTR GCA 90 bp | GTACATTATGATCTCTGCATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTCCTTGCTCAGAGTCCTaGTCCCCACGCAGGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHYDLCIGRSKYAVFLSGPCSES*SPRRTP Trigger: TGGCGTCCTGCGTGGGGAGCAGGACTCTGAGCAAGG...ACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| 3UTR CAA 72 bp | TGCCGGTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTaGCTTGAATGCTTCGGTGGGCTGTCTTCAGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: CRFLLLEEWLSW*LECFGGLSSEP Trigger: AGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCCGCTTCTCGTGTAGCATATCGAAGATTGGGATCCAGCCAATACATCAGGCCACTTGCTGCTCGTTaGTCATGCGGAAATGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: MSASRVAYRRLGSSQYIRPLAAR*SCGNAS Trigger: GGATGCATTTCCGCATGATCAACGAGCAGCAAGTGG...CCTGATGTATTGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000224290.2 |
||
| CDS-3UTR TCA 90 bp | ATACTCCATGATGTCCGCTTCTCGTGTAGCATATCGAAGATTGGGATCCAGCCACGCCATAAGGCTGGATaGGGTCGAGTAAATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: ILHDVRFSCSISKIGIQPRHKAG*GRVNGP Trigger: TGGTCCATTTACTCGACCTCATCCAGCCTTATGGCG...TGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGACATCATGGAGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224290.2 |
||
| CDS-3UTR TCA 90 bp | CATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTCTAGGCACTCTGGAACACTTCCAGGAAACCAATaGCCCCAAACACCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HRKVQICCFPLGSRHSGTLPGNQ*PQTPST Trigger: AGTGCTGGGTGTTTGGGGTCATTGGTTTCCTGGAAG...TGTTCCAGAGTGCCTAGACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| 3UTR CAA 72 bp | GGTTCCTTCTTCTGGAAGAATGGCTTTCGTGGTTGCTaGAATGCTTCGGTGGGCTGTCTTCAGAACCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFFWKNGFRGC*NASVGCLQNLW Trigger: CCAAAGGTTCTGAAGACAGCCCACCGAAGCATTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAGGAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR TCA 90 bp | ATACCCACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACACCACTTGCTGCTCGTTaGTCATGCGGAAATGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: IPTSTSHEPERQSRQNITPLAAR*SCGNAS Trigger: GGATGCATTTCCGCATGATCAACGAGCAGCAAGTGG...TGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| CDS-3UTR TCA 90 bp | CACTCTCTGAAAGGAAGACTTGGGATCAAACCACCTGACGTAAGTCCAGCTAGCAGAAGAAGTCTATGGTaGTGTCCTCCACTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HSLKGRLGIKPPDVSPASRRSLW*CPPLAA Trigger: AGCAGCAAGTGGAGGACATCACCATAGACTTCTTCT...GCTAGCTGGACTTACGTCAGGTGGTTTGATCCCAAGTCTTCCTTTCAGAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR TCA 90 bp | ATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTCTAGGCACTCTGGAACATCGCCATAAGGCTGGATaGGGTCGAGTAAATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: IGRSKYAVFLSGLGTLEHRHKAG*GRVNGP Trigger: TGGTCCATTTACTCGACCTCATCCAGCCTTATGGCG...ATGTTCCAGAGTGCCTAGACCCGAGAGGAAAACAGCATATTTGGACCTTCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | ACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAGGAAAAACCAGCTTTCGTGGTTGCTTaGATGCTTCGGTGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSHEPERQSRQNITEEKPAFVVA*MLRWAV Trigger: GACAGCCCACCGAAGCATTCAAGCAACCACGAAAGC...TGGTTTTTCCTCTGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | ACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAGGAACGCCATAAGGCTGGATaGGGTCGAGTAAATGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: TSTSHEPERQSRQNITEERHKAG*GRVNGP Trigger: AGGTCCATTTACTCGACCTCATCCAGCCTTATGGCG...TTCCTCTGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACGATTCGTGGTTGCTTGAATaGTTCGGTGGGCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSVCPGLWETRLTLSSHDSWLLE*FGGLSS Trigger: TGAAGACAGCCCACCGAAGCATTCAAGCAACCACGA...ATCGTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | CCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACGATAATGGCTTTCGTGGTTaGTTGAATGCTTCGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSVCPGLWETRLTLSSHDNGFRG*LNASVG Trigger: GCCCACCGAAGCATTCAAGCAACCACGAAAGCCATT...ATCGTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR CCA 90 bp | CTAGAAGGAACCCTCCCCCAATTTCAGCAGTGGATTCTGGAAGCTTTGAAGCTAATGTCCAGAATGACTTaGTCCCACCAGCACTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEGTLPQFQQWILEALKLMSRMT*SHQHSA Trigger: TGCTGAGTGCTGGTGGGACCAAGTCATTCTGGACAT...TAGCTTCAAAGCTTCCAGAATCCACTGCTGAAATTGGGGGAGGGTTCCTTCTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | TTAATACCCACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCCCACTTGCTGCTCGTTaGTCATGCGGAAATGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LIPTSTSHEPERQSRQNIPLAAR*SCGNAS Trigger: GGATGCATTTCCGCATGATCAACGAGCAGCAAGTGG...GATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| CDS-3UTR TCA 90 bp | CCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACGATTCCCAGGTTATCACATaGCAGTTCACAGCATACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PSVCPGLWETRLTLSSHDSQVIT*QFTAYS Trigger: GGAGTATGCTGTGAACTGTCATGTGATAACCTGGGA...ATCGTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | TTAATACCCACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCTGGTGTGGATGTCCTTaGAGCTTGCCCAGTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIPTSTSHEPERQSRQNIWCGCP*SLPSGK Trigger: CTTACCACTGGGCAAGCTTCAAGGACATCCACACCA...GATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTATTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | AGGTCCAAATATGCTGTTTTCCTCTCGGGTCTAGGCACTCTGGAACATCTGACAGTGACCATAGTGCTCTaGATACCAAACCATGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: RSKYAVFLSGLGTLEHLTVTIVL*IPNHAV Trigger: TACGGCATGGTTTGGTATGCAGAGCACTATGGTCAC...TGTCAGATGTTCCAGAGTGCCTAGACCCGAGAGGAAAACAGCATATTTGGACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CCA 90 bp | GTACATTATGATCTCTGCATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTTCAACAAGGCCTTCATaGCCCAGCCCCAGAAATGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHYDLCIGRSKYAVFLSGSTRPS*PSPRNG Trigger: GCCATTTCTGGGGCTGGGCCATGAAGGCCTTGTTGA...ACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CCA 90 bp | ACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAGGAAAAACCACCCCAGCTTAAGGGATaGCTGGCTTGGAACACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSHEPERQSRQNITEEKPPQLKG*LAWNTK Trigger: CTTTGTGTTCCAAGCCAGCCATCCCTTAAGCTGGGG...TGGTTTTTCCTCTGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | ACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAGGAAAAACCATGGGCAGGAGATGCATaGAGAAAAGCTCTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSHEPERQSRQNITEEKPWAGDA*RKALSA Trigger: AGCTGACAGAGCTTTTCTTCATGCATCTCCTGCCCA...TGGTTTTTCCTCTGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR TCA 90 bp | ATACCCACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAATACCAGCCACTCTCTaGAAGGAAGACTTGGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: IPTSTSHEPERQSRQNITIPATL*KEDLGS Trigger: TGATCCCAAGTCTTCCTTTCAGAGAGTGGCTGGTAT...TGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR GCA 90 bp | CTTCACACTCTGAATAGGTCTTTTCCCGGTGACCATAGTGCTCTGCATACCAAAATGTCCTCCACTTGCTaGTCGTTGATCATGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LHTLNRSFPGDHSALHTKMSSTC*SLIMRK Trigger: TTTCCGCATGATCAACGAGCAGCAAGTGGAGGACAT...TTTGGTATGCAGAGCACTATGGTCACCGGGAAAAGACCTATTCAGAGTGTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR GCA 90 bp | CATGATGTCCGCTTCTCGTGTAGCATATCGAAGATTGGGATCCAGCCAATACATATGTCCTCCACTTGCTaGTCGTTGATCATGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HDVRFSCSISKIGIQPIHMSSTC*SLIMRK Trigger: TTTCCGCATGATCAACGAGCAGCAAGTGGAGGACAT...ATGTATTGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGACATCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000224290.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAATTTCAGCAGTGGATTCTGGAAGCTTTGAAGCTATTTAACTCAAAAACAACCGGCAAACGACCATaGCCAGCCAGATTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PQFQQWILEALKLFNSKTTGKRP*PARFHH Trigger: GTGGTGGAATCTGGCTGGGCATGGTCGTTTGCCGGT...TGTTTTTGAGTTAAATAGCTTCAAAGCTTCCAGAATCCACTGCTGAAATTGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CCA 90 bp | ACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAGGAAATGCCAGGAGATCTCTaGACTGTAAGTGCCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSTSHEPERQSRQNITEEMPGDL*TVSAIF Trigger: GAAGATGGCACTTACAGTCCAGAGATCTCCTGGCAT...TTCCTCTGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | GTACATTATGATCTCTGCATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTGCCATCTTCACACTCTaGATAGGTCTTTTCCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: VHYDLCIGRSKYAVFLSGAIFTL*IGLFPV Trigger: CACCGGGAAAAGACCTATTCAGAGTGTGAAGATGGC...ACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | CTAGAAGGAACCCTCCCCCAATTTCAGCAGTGGATTCTGGAAGCTTTGAAGCTAAAATTGGGCAGGAGATaGATGAAGAAAAGCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEGTLPQFQQWILEALKLKLGRR*MKKSSV Trigger: GACAGAGCTTTTCTTCATGCATCTCCTGCCCAATTT...TAGCTTCAAAGCTTCCAGAATCCACTGCTGAAATTGGGGGAGGGTTCCTTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | CTAGAAGGAACCCTCCCCCAATTTCAGCAGTGGATTCTGGAAGCTTTGAAGCTATCTCTGGACTGTAAGTaGCATCTTCACACTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEGTLPQFQQWILEALKLSLDCK*HLHTLN Trigger: ATTCAGAGTGTGAAGATGGCACTTACAGTCCAGAGA...TAGCTTCAAAGCTTCCAGAATCCACTGCTGAAATTGGGGGAGGGTTCCTTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR CCA 90 bp | CTAGAAGGAACCCTCCCCCAATTTCAGCAGTGGATTCTGGAAGCTTTGAAGCTACTTCTTCTGGAAGAATaGCTTTCGTGGTTGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LEGTLPQFQQWILEALKLLLLEE*LSWLLE Trigger: TTCAAGCAACCACGAAAGCCATTCTTCCAGAAGAAG...TAGCTTCAAAGCTTCCAGAATCCACTGCTGAAATTGGGGGAGGGTTCCTTCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | CCCCAATTTCAGCAGTGGATTCTGGAAGCTTTGAAGCTATTTAACTCAAAAACATGCACTGTGTGTCCGTaGGGTAGGCATAGTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQFQQWILEALKLFNSKTCTVCP*GRHSTV Trigger: GACAGTACTATGCCTACCTCACGGACACACAGTGCA...TGTTTTTGAGTTAAATAGCTTCAAAGCTTCCAGAATCCACTGCTGAAATTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | CTTCCTTCATTTCTTTCCAACTCCATTAGTGACTTTGGACTTAGAATGCCGGTTAGTTCACATCATCCTTaGTCAGAGTCCTGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSFLSNSISDFGLRMPVSSHHP*SESCSP Trigger: TGGGGAGCAGGACTCTGAGCAAGGATGATGTGAACT...AACCGGCATTCTAAGTCCAAAGTCACTAATGGAGTTGGAAAGAAATGAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
||
| CDS-3UTR GCA 90 bp | AGTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCAGTTCACATCATCCTTaGTCAGAGTCCTGCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLSELKQSIKWTGRLSSHHP*SESCSP Trigger: TGGGGAGCAGGACTCTGAGCAAGGATGATGTGAACT...GAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| CDS-3UTR CCA 90 bp | GTACATTATGATCTCTGCATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTAGCTTAAGGGATGGCTaGCTTGGAACACAAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VHYDLCIGRSKYAVFLSGSLRDG*LGTQRC Trigger: ACATCTTTGTGTTCCAAGCCAGCCATCCCTTAAGCT...ACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCGCCGGTTCCTTCTTCTaGAAGAATGGCTTTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLSELKQSIKWTGRLAGSFF*KNGFRG Trigger: ACCACGAAAGCCATTCTTCCAGAAGAAGGAACCGGC...GAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR TCA 90 bp | GTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCAAGAAGAAGTCTATGGTaGTGTCCTCCACTTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VKADSLNLNNQSNGQADSRRSLW*CPPLAA Trigger: AGCAGCAAGTGGAGGACATCACCATAGACTTCTTCT...TGAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| CDS-3UTR GCA 90 bp | GTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCAATGTCCTCCACTTGCTaGTCGTTGATCATGCGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VKADSLNLNNQSNGQADSMSSTC*SLIMRK Trigger: TTTCCGCATGATCAACGAGCAGCAAGTGGAGGACAT...TGAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
||
| CDS-3UTR CCA 90 bp | GTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCAAAGGGATGGCTGGCTTaGAACACAAAGATGTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VKADSLNLNNQSNGQADSKGWLA*NTKMCF Trigger: GAAGCACATCTTTGTGTTCCAAGCCAGCCATCCCTT...TGAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR CCA 90 bp | AGTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCTGTCTTCAGAACCTTTaGAGCCTTTCCCATGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLSELKQSIKWTGRLCLQNL*SLSHDA Trigger: GGCATCATGGGAAAGGCTCCAAAGGTTCTGAAGACA...GAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | TGTAGCAAGTTTGTTTTACAGCCCACTTGTCTGAGAAAGAAAATCCAACCTAGTAGATTCCACCACCATTaGACAACAGGATGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSKFVLQPTCLRKKIQPSRFHHH*TTGCPE Trigger: TTCTGGACATCCTGTTGTGCAATGGTGGTGGAATCT...ACTAGGTTGGATTTTCTTTCTCAGACAAGTGGGCTGTAAAACAAACTTGCTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
||
| CDS-3UTR GCA 90 bp | AGTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCGATGTCCTTGAAGCTTaGCCAGTGGTAAGTTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLSELKQSIKWTGRLDVLEA*PVVSSH Trigger: ATGAGAACTTACCACTGGGCAAGCTTCAAGGACATC...GAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR TCA 90 bp | AGTAAAAGCAGACTCTCTGAACTTAAACAATCAATCAAATGGACAGGCAGACTCGCAAATATATCAAAGTaGCTAACGATTCTCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKSRLSELKQSIKWTGRLANISK*LTILSQ Trigger: CTGGGAGAGAATCGTTAGTCACTTTGATATATTTGC...GAGTCTGCCTGTCCATTTGATTGATTGTTTAAGTTCAGAGAGTCTGCTTTTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR GCA 90 bp | GTACATTATGATCTCTGCATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTCCAGAAATGGCCAAATaGAAATATATCAAAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: VHYDLCIGRSKYAVFLSGPEMAK*KYIKVT Trigger: AGTCACTTTGATATATTTGCATTTGGCCATTTCTGG...ACCCGAGAGGAAAACAGCATATTTGGACCTTCCTATGCAGAGATCATAATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CAA 90 bp | AGCCGAGGCTCCAGTGCCAGCAGCCAGCCTCTTCACTCCGGCTGGGGTCATCTGTCCACTTGCTGCTCGTaGATCATGCGGAAATGCATC | + |
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Preference number: 5 (lower is better) Translates to: SRGSSASSQPLHSGWGHLSTCCS*IMRKCI Trigger: GATGCATTTCCGCATGATCAACGAGCAGCAAGTGGA...CAGATGACCCCAGCCGGAGTGAAGAGGCTGGCTGCTGGCACTGGAGCCTCGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| CDS-3UTR CAA 90 bp | AGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTTGTGCACTCAGTCGAATGGCTTTCGTGGTaGCTTGAATGCTTCGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: REPHCPRSARKVVLVHSVEWLSW*LECFGG Trigger: CCCACCGAAGCATTCAAGCAACCACGAAAGCCATTC...GACTGAGTGCACAAGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CAA 90 bp | GGAAAAGGACCCTGGCAGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTGTAGCATATCGAAGATaGGGATCCAGCCAATACATC | + |
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Preference number: 5 (lower is better) Translates to: GKGPWQGAPLSQIRSQGRVAYRR*GSSQYI Trigger: GATGTATTGGCTGGATCCCAATCTTCGATATGCTAC...ACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCTGCCAGGGTCCTTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CAA 90 bp | AGGGAGCCCCACTGTCCCAGATCCGCTCGCAAGGTCGTTCTTGTGCACTCAGTCCAGATTCCACCACCATaGCACAACAGGATGTCCAGA | + |
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Preference number: 5 (lower is better) Translates to: REPHCPRSARKVVLVHSVQIPPP*HNRMSR Trigger: TCTGGACATCCTGTTGTGCAATGGTGGTGGAATCTG...GACTGAGTGCACAAGAACGACCTTGCGAGCGGATCTGGGACAGTGGGGCTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CAA 90 bp | CAGCCTAGTGTGTGTCCAGGTCTATGGGAGACAAGACTTACACTCTCAAGTCACGGTGATGTCCTCCACTaGCTGCTCGTTGATCATGCG | + |
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Preference number: 5 (lower is better) Translates to: QPSVCPGLWETRLTLSSHGDVLH*LLVDHA Trigger: CGCATGATCAACGAGCAGCAAGTGGAGGACATCACC...GTGACTTGAGAGTGTAAGTCTTGTCTCCCATAGACCTGGACACACACTAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 |
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| CDS-3UTR CAA 90 bp | ACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACAGAGGAATGTGTCCCTACACGCTaGCACTGTGTGTCCGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: TSTSHEPERQSRQNITEECVPTR*HCVSVR Trigger: CCTCACGGACACACAGTGCAAGCGTGTAGGGACACA...TTCCTCTGTGATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CAA 90 bp | AAATTGGGCAGGAGATGCATGAAGAAAAGTTGGAACTGTAGTCGCTGCAGCAGTGGTGATGTCCTCCACTaGCTGCTCGTTGATCATGCG | + |
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Preference number: 5 (lower is better) Translates to: KLGRRCMKKSWNCSRCSSGDVLH*LLVDHA Trigger: CGCATGATCAACGAGCAGCAAGTGGAGGACATCACC...ACTGCTGCAGCGACTACAGTTCCAACTTTTCTTCATGCATCTCCTGCCCAATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| CDS-3UTR CAA 90 bp | ATAGGAAGGTCCAAATATGCTGTTTTCCTCTCGGGTCTAGGCACTCTGGAACATGATGTCCAGAATGACTaGGTCCCACCAGCACTCAGC | + |
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Preference number: 5 (lower is better) Translates to: IGRSKYAVFLSGLGTLEHDVQND*VPPALS Trigger: GCTGAGTGCTGGTGGGACCAAGTCATTCTGGACATC...ATGTTCCAGAGTGCCTAGACCCGAGAGGAAAACAGCATATTTGGACCTTCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CAA 90 bp | ATGTCCGCTTCTCGTGTAGCATATCGAAGATTGGGATCCAGCCAATACATCAGGTCCACTTGCTGCTCGTaGATCATGCGGAAATGCATC | + |
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Preference number: 5 (lower is better) Translates to: MSASRVAYRRLGSSQYIRSTCCS*IMRKCI Trigger: GATGCATTTCCGCATGATCAACGAGCAGCAAGTGGA...CCTGATGTATTGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000224244.2 ENSMUST00000224290.2 |
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| CDS-3UTR CAA 90 bp | GATTCTCTCCCAGGTTATCACATGACAGTTCACAGCATACTCCATGATGTCCGCATGCCTCTCCAGATGTaGTCTTCCGGAACAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: DSLPGYHMTVHSILHDVRMPLQM*SSGTES Trigger: TGACTCTGTTCCGGAAGACAACATCTGGAGAGGCAT...GCGGACATCATGGAGTATGCTGTGAACTGTCATGTGATAACCTGGGAGAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224290.2 |
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| CDS-3UTR CAA 90 bp | ATCAAAGTGACTAACGATTCTCTCCCAGGTTATCACATGACAGTTCACAGCATATCCACTTGCTGCTCGTaGATCATGCGGAAATGCATC | + |
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Preference number: 5 (lower is better) Translates to: IKVTNDSLPGYHMTVHSISTCCS*IMRKCI Trigger: GATGCATTTCCGCATGATCAACGAGCAGCAAGTGGA...TATGCTGTGAACTGTCATGTGATAACCTGGGAGAGAATCGTTAGTCACTTTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| CDS-3UTR CAA 90 bp | TTAATACCCACTAGCACCTCACATGAGCCAGAAAGACAGAGTAGGCAAAACATCACTCCATTAGTGACTTaGGACTTAGAATGCCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: LIPTSTSHEPERQSRQNITPLVT*DLECRF Trigger: GAACCGGCATTCTAAGTCCAAAGTCACTAATGGAGT...GATGTTTTGCCTACTCTGTCTTTCTGGCTCATGTGAGGTGCTAGTGGGTATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS GCA 90 bp | GCATATCGAAGATTGGGATCCAGCCAATACATCAGGGATTTAACCTaGTCGAAGTTCAGGAAAAGGAGGAATACCAAGAAGAGGAAATAC | + |
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Preference number: 5 (lower is better) Translates to: AYRRLGSSQYIRDLT*SKFRKRRNTKKRKY Trigger: GTATTTCCTCTTCTTGGTATTCCTCCTTTTCCTGAACTTCGAGCAGGTTAAATCCCTGATGTATTGGCTGGATCCCAATCTTCGATATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS-3UTR CAA 90 bp | TGTAGCAAGTTTGTTTTACAGCCCACTTGTCTGAGAAAGAAAATCCAACCTAGTATGCCTCTCCAGATGTaGTCTTCCGGAACAGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CSKFVLQPTCLRKKIQPSMPLQM*SSGTES Trigger: TGACTCTGTTCCGGAAGACAACATCTGGAGAGGCAT...ACTAGGTTGGATTTTCTTTCTCAGACAAGTGGGCTGTAAAACAAACTTGCTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS CAA 90 bp | GATGGTGTGCGGCCGGTAGAAGAAGTCTATGGTGATGTCCTCCACTaGCTGCTCGTTGATCATGCGGAAATGCATCCTGTAGTTCACATC | + |
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Preference number: 6 (lower is better) Translates to: DGVRPVEEVYGDVLH*LLVDHAEMHPVVHI Trigger: GATGTGAACTACAGGATGCATTTCCGCATGATCAACGAGCAGCAAGTGGAGGACATCACCATAGACTTCTTCTACCGGCCGCACACCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 ENSMUST00000224290.2 |
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| CDS CAA 72 bp | CGGCCGGTAGAAGAAGTCTATGGTGATGTCCTCCACTaGCTGCTCGTTGATCATGCGGAAATGCATCCTGTA | + |
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Preference number: 6 (lower is better) Translates to: RPVEEVYGDVLH*LLVDHAEMHPV Trigger: TACAGGATGCATTTCCGCATGATCAACGAGCAGCAAGTGGAGGACATCACCATAGACTTCTTCTACCGGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021990.4 ENSMUST00000224244.2 ENSMUST00000224290.2 |
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| CDS TCA 72 bp | ACACTGAGACCAAAAACCATTCGCCATAAGGCTGGATaGGGTCGAGTAAATGGACCTGGTGAAGGCGAAGTA | + |
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Preference number: 6 (lower is better) Translates to: TLRPKTIRHKAG*GRVNGPGEGEV Trigger: TACTTCGCCTTCACCAGGTCCATTTACTCGACCTCATCCAGCCTTATGGCGAATGGTTTTTGGTCTCAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224244.2 |
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| CDS CAA 90 bp | ATGATGAGAAAGAAGAAGATAACAGACAGGATGCCTCTCCAGATGTaGTCTTCCGGAACAGAGTCATCCCTGGTGAAGGCGAAGTACATG | + |
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Preference number: 6 (lower is better) Translates to: MMRKKKITDRMPLQM*SSGTESSLVKAKYM Trigger: CATGTACTTCGCCTTCACCAGGGATGACTCTGTTCCGGAAGACAACATCTGGAGAGGCATCCTGTCTGTTATCTTCTTCTTTCTCATCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000224290.2 |
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| CDS CAA 90 bp | ACAGCATACTCCATGATGTCCGCTTCTCGTGTAGCATATCGAAGATaGGGATCCAGCCAATACATCAGGGATTTAACCTGCTCGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: TAYSMMSASRVAYRR*GSSQYIRDLTCSKF Trigger: GAACTTCGAGCAGGTTAAATCCCTGATGTATTGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGACATCATGGAGTATGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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| CDS TCA 72 bp | ACACTGAGACCAAAAACCATTCGCCATAAGGCTGGATaGGGTCGAGTAAATGGACCATTGGGGAATGCTAAC | + |
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Preference number: 6 (lower is better) Translates to: TLRPKTIRHKAG*GRVNGPLGNAN Trigger: GTTAGCATTCCCCAATGGTCCATTTACTCGACCTCATCCAGCCTTATGGCGAATGGTTTTTGGTCTCAGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021990.4 ENSMUST00000225347.2 |
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| CDS CAA 72 bp | TCCATGATGTCCGCTTCTCGTGTAGCATATCGAAGATaGGGATCCAGCCAATACATCAGGGATTTAACCTGC | + |
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Preference number: 6 (lower is better) Translates to: SMMSASRVAYRR*GSSQYIRDLTC Trigger: GCAGGTTAAATCCCTGATGTATTGGCTGGATCCCAATCTTCGATATGCTACACGAGAAGCGGACATCATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021990.4 |
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