Pregenerated sensors for PTCHD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039198Ensembl transcript IDs: ENSMUST00000036690.7
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTTCAGGCCATCAGGAATaGTATAACTGGTTCGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSSGHQE*YNWFGL Trigger: TAACCCGAACCAGTTATACAATTCCTGATGGCCTGA...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| 3UTR-3UTR CAA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACACTGGTTCGGGTTATTaGTTACTGTGTATTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHTGSGY*LLCIQT Trigger: TGTTTGAATACACAGTAACAAATAACCCGAACCAGT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACGCGACGCGGCGGAGGTaGCTCCTGACCCAGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHATRRR*LLTQRW Trigger: CCACCGCTGGGTCAGGAGGCACCTCCGCCGCGTCGC...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTGGCGGAGGTGCCTCCTaGCCCAGCGGTGGCAAGCGC | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVGGGAS*PSGGKR Trigger: GCGCTTGCCACCGCTGGGTCAGGAGGCACCTCCGCC...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTTGGCAAGCGCTCCAGTaGCGGCCCGGTGGTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVWQALQ*RPGGPA Trigger: AGCTGGACCACCGGGCCGCCACTGGAGCGCTTGCCA...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACTCCACCTTGGACGGTaGCTCCCCCTGCTCCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLLHLGR*LPLLLL Trigger: GAGGAGGAGCAGGGGGAGTCACCGTCCAAGGTGGAG...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTTTGGCCTTCCAACGGTaGCTCCCGCTGCTCCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVLAFQR*LPLLLR Trigger: GCGGAGGAGCAGCGGGAGGCACCGTTGGAAGGCCAA...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTAAGCGCCTGCACCGCCTaGTCCAGCTTGCTCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLSACTA*SSLLTS Trigger: AGAGGTGAGCAAGCTGGACCAGGCGGTGCAGGCGCT...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTAGCTCCAGCAGTGAGTTaGCGAGGGACACCACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLAPAVS*RGTPPR Trigger: TCTTGGTGGTGTCCCTCGCCAACTCACTGCTGGAGC...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTAAAACAGCAGAGGGTTaGGCGGCACGCACAGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVKTAEG*AARTAS Trigger: AGACGCTGTGCGTGCCGCCCAACCCTCTGCTGTTTT...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCAACGCCGCTCTGCCTTaGCTGGGCTGCCAATCGGTG | + |
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Preference number: 4 (lower is better) Translates to: FSYMYTMCLVYILHYPPFNAALP*LGCQSV Trigger: CACCGATTGGCAGCCCAGCCAAGGCAGAGCGGCGTT...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTGGGACACCACCAAGATaGATGCAAAGTTGGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVGTPPR*MQSWSR Trigger: CCGAGACCAACTTTGCATCCATCTTGGTGGTGTCCC...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACAAATGGTCAAGAAAGTaGGTCAGCCATGCCTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHKWSRK*VSHAWL Trigger: TAGCCAGGCATGGCTGACTCACTTTCTTGACCATTT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACCTGCCTGGAAAGGGATaGAAAGTAGACCACCTCTAT | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHLPGKG*KVDHLY Trigger: ATAGAGGTGGTCTACTTTTCATCCCTTTCCAGGCAG...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACAAAGCCACTCACCACTaGCATGGCAACAGAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHKATHH*HGNRKH Trigger: GTGTTTTCTGTTGCCATGTCAGTGGTGAGTGGCTTT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTATTCTCTTATGCTCTCTaGGAGGCTGGTCTTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLFSYAL*EAGLLP Trigger: TGGCAGAAGACCAGCCTCTCAGAGAGCATAAGAGAA...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACAGCCAGCGGGACCATaGAACTTCTCTTTTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLQPAGP*NFSFTI Trigger: GATGGTAAAAGAGAAGTTGCATGGTCCCGCTGGCTG...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACAGCCTCGGGAAGAAGTaGTTTCATTTGATGAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHSLGKK*FHLMRR Trigger: TCTCCTCATCAAATGAAATCACTTCTTCCCGAGGCT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTAACGACGAGTTATGCTaGCAGGAAAACAGCAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSNDELC*QENSRG Trigger: CCCTCTGCTGTTTTCCTGGCAGCATAACTCGTCGTT...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACTTCAACGACGAGTTATaGTGCCAGGAAAACAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHFNDEL*CQENSR Trigger: TCTGCTGTTTTCCTGGCAGCATAACTCGTCGTTGAA...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCAATGGGACCCCAAGGTaGAGCATCAGGCCAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSYMYTMCLVYILHYPPFNGTPR*SIRPKP Trigger: TGGCTTTGGCCTGATGCTGCACCTTGGGGTCCCATT...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTGCTTGCTCACCTCTTTaGATATTTCTGGCTCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSACSPL*IFLAPA Trigger: TGCTGGAGCCAGAAATATTCAAAGAGGTGAGCAAGC...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACGTGAATTTGCAACTATaGTCACAAATGGGACCCCAA | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHVNLQL*SQMGPQ Trigger: TTGGGGTCCCATTTGTGATCATAGTTGCAAATTCAC...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTGAGAGGCTGGTCTTCTaGCAGGCAGAAATCATGATA | + |
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Preference number: 4 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSERLVF*QAEIMI Trigger: TATCATGATTTCTGCCTGGCAGAAGACCAGCCTCTC...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACATCCAGAGCCATAACTaGTCCAAAACAGGTGATACT | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHIQSHN*SKTGDT Trigger: AGTATCACCTGTTTTGGAGCAGTTATGGCTCTGGAT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACAGCGTCTTGTACTTaGCACACACCTCTTGGTATA | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVTASCT*HTPLGI Trigger: TATACCAAGAGGTGTGTGCCAAGTACAAGACGCTGT...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACAAACTCCAGCTGCCTaGAAAGGGATGAAAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLQTPAA*KGMKSR Trigger: TCTACTTTTCATCCCTTTCCAGGCAGCTGGAGTTTG...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACCTGAAGGCTCAGTACTaGAAACAAATGCATAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHLKAQY*KQMHRR Trigger: TCTCCTATGCATTTGTTTCCAGTACTGAGCCTTCAG...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCGCCTCAAACTCCAGCTaGCTGGAAAGGGATGAAAAG | + |
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Preference number: 4 (lower is better) Translates to: FSYMYTMCLVYILHYPPFASNSS*LERDEK Trigger: CTTTTCATCCCTTTCCAGGCAGCTGGAGTTTGAGGC...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCTGCGTTCCATTTTCCTaGACAACTTTCAGCGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: FSYMYTMCLVYILHYPPFCVPFS*TTFSAC Trigger: GCAGGCGCTGAAAGTTGTCCAGGAAAATGGAACGCA...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTAAGTGAGGAATATTTTTaGTCTGGCTTTTCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLSEEYF*SGFSSQ Trigger: CTGGCTGGAAAAGCCAGACCAAAAATATTCCTCACT...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTAAACCCTTCTTGCACTTaGAAGCACCCATATATACTG | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLNPSCT*KHPYIL Trigger: CAGTATATATGGGTGCTTCCAAGTGCAAGAAGGGTT...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTAGCAGGACTTTTTAAGTaGGGAATATTTTTGGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: SDWIQAIRNCITGSGYLLAGLFK*GIFLVW Trigger: CCAGACCAAAAATATTCCTCACTTAAAAAGTCCTGC...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTTCTTGGTATAGAATCTaGGTTCCATTTTCCTGGACA | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVSWYRI*VPFSWT Trigger: TGTCCAGGAAAATGGAACGCAGATTCTATACCAAGA...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACCATGTATTGCATATATaGCTCCAACCAAAACTCTGT | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHHVLHI*LQPKLC Trigger: ACAGAGTTTTGGTTGGAGGCATATATGCAATACATG...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACCTGCTATTCATGTATTaGATATATGCCTCCAACCAA | + |
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Preference number: 4 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHLLFMY*IYASNQ Trigger: TTGGTTGGAGGCATATATGCAATACATGAATAGCAG...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTAGGGAACACACTGGATaGGGAATTAACAATAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSREHTG*GINNKE Trigger: TTCCTTATTGTTAATTCCTCATCCAGTGTGTTCCCT...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCTTGGCACACACCTCTTaGTATAGAATCTGCGTTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSYMYTMCLVYILHYPPFLAHTS*YRICVP Trigger: TGGAACGCAGATTCTATACCAAGAGGTGTGTGCCAA...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTCCTTTGAATATGAATTaGAGAGTCGTTCTCTTATGC | + |
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Preference number: 4 (lower is better) Translates to: IRLDSGHQELYNWFGLFVPLNMN*RVVLLC Trigger: GCATAAGAGAACGACTCTCCAATTCATATTCAAAGG...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR CCA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTGAAACATCTACAATCTaGATAAAGCCTCGGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSETSTI*IKPREE Trigger: TTCTTCCCGAGGCTTTATCCAGATTGTAGATGTTTC...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR TCA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTAATGAACATAGCTGTTaGTGCAATCATGACATTTCG | + |
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Preference number: 4 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSNEHSC*CNHDIS Trigger: CGAAATGTCATGATTGCATCAACAGCTATGTTCATT...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| 3UTR CAA 72 bp | TCACTAAGACATTTTCATACATGTATACAATGTGCCTaGTTTATATCCTACATTACCCTCCCTTCCCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SLRHFHTCIQCA*FISYITLPSLS Trigger: TGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAATGTCTTAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS-3UTR GCA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCAAACACTCCAAAGACTaGAACACACATCTTGTTTCT | + |
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Preference number: 4 (lower is better) Translates to: FSYMYTMCLVYILHYPPFKHSKD*NTHLVS Trigger: AGAAACAAGATGTGTGTTGCAGTCTTTGGAGTGTTT...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| 3UTR CAA 72 bp | CATTTTATAATCAGACTGGATTCAGGCCATCAGGAATaGTATAACTGGTTCGGGTTATTTGTTACTGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: HFIIRLDSGHQE*YNWFGLFVTVY Trigger: ATACACAGTAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGATTATAAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS CCA 90 bp | CCAACGGTGCCTCCCGCTGCTCCTCCGCCTCTCCGAGCTCCACCTTaGACGGTGACTCCCCCTGCTCCTCCTCTCCGGGCGCCACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: PTVPPAAPPPLRAPP*TVTPPAPPLRAPPW Trigger: CCAAGGTGGCGCCCGGAGAGGAGGAGCAGGGGGAGTCACCGTCCAAGGTGGAGCTCGGAGAGGCGGAGGAGCAGCGGGAGGCACCGTTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS GCA 90 bp | GCCCGCCTCATCAAGTGGCACGGCTTCCAGTTGGCCTTCCAACGGTaGCTCCCGCTGCTCCTCCGCCTCTCCGAGCTCCACCTTGGACGG | + |
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Preference number: 5 (lower is better) Translates to: ARLIKWHGFQLAFQR*LPLLLRLSELHLGR Trigger: CCGTCCAAGGTGGAGCTCGGAGAGGCGGAGGAGCAGCGGGAGGCACCGTTGGAAGGCCAACTGGAAGCCGTGCCACTTGATGAGGCGGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS CCA 90 bp | GTGGTCCAGCTAGGGCCCGCCTCATCAAGTGGCACGGCTTCCAGTTaGCCTTCCAACGGTGCCTCCCGCTGCTCCTCCGCCTCTCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VVQLGPASSSGTASS*PSNGASRCSSASPS Trigger: GCTCGGAGAGGCGGAGGAGCAGCGGGAGGCACCGTTGGAAGGCCAACTGGAAGCCGTGCCACTTGATGAGGCGGGCCCTAGCTGGACCAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 90 bp | ACAGGTTCAACGACGAGTTATGCTGCCAGGAAAACAGCAGAGGGTTaGGCGGCACGCACAGCGTCTTGTACTTGGCACACACCTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TGSTTSYAARKTAEG*AARTASCTWHTPLG Trigger: ACCAAGAGGTGTGTGCCAAGTACAAGACGCTGTGCGTGCCGCCCAACCCTCTGCTGTTTTCCTGGCAGCATAACTCGTCGTTGAACCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 90 bp | ACGCACAGCGTCTTGTACTTGGCACACACCTCTTGGTATAGAATCTaGGTTCCATTTTCCTGGACAACTTTCAGCGCCTGCACCGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: THSVLYLAHTSWYRI*VPFSWTTFSACTAW Trigger: CCAGGCGGTGCAGGCGCTGAAAGTTGTCCAGGAAAATGGAACGCAGATTCTATACCAAGAGGTGTGTGCCAAGTACAAGACGCTGTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 90 bp | TACTTGGCACACACCTCTTGGTATAGAATCTGCGTTCCATTTTCCTaGACAACTTTCAGCGCCTGCACCGCCTGGTCCAGCTTGCTCACC | + |
|
Preference number: 5 (lower is better) Translates to: YLAHTSWYRICVPFS*TTFSACTAWSSLLT Trigger: GGTGAGCAAGCTGGACCAGGCGGTGCAGGCGCTGAAAGTTGTCCAGGAAAATGGAACGCAGATTCTATACCAAGAGGTGTGTGCCAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS TCA 90 bp | TCCAGGGTCAGACTGCTCTTCATGTCATTAAAATGGTCAAGAAAGTaGGTCAGCCATGCCTGGCTACGTTCACTGTCTTCGGGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRVRLLFMSLKWSRK*VSHAWLRSLSSGSS Trigger: GGAGGACCCCGAAGACAGTGAACGTAGCCAGGCATGGCTGACTCACTTTCTTGACCATTTTAATGACATGAAGAGCAGTCTGACCCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACGGCTCCAGCAGTGAGTaGGCGAGGGACACCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHGSSSE*ARDTTK Trigger: CTTGGTGGTGTCCCTCGCCAACTCACTGCTGGAGCC...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS TCA 90 bp | AAATGGGACCCCAAGGTGCAGCATCAGGCCAAAGCCACTCACCACTaGCATGGCAACAGAAAACACTCCAAAGACTGCAACACACATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KWDPKVQHQAKATHH*HGNRKHSKDCNTHL Trigger: AAGATGTGTGTTGCAGTCTTTGGAGTGTTTTCTGTTGCCATGTCAGTGGTGAGTGGCTTTGGCCTGATGCTGCACCTTGGGGTCCCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 90 bp | TGGTATAGAATCTGCGTTCCATTTTCCTGGACAACTTTCAGCGCCTaGACCGCCTGGTCCAGCTTGCTCACCTCTTTGAATATTTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WYRICVPFSWTTFSA*TAWSSLLTSLNISG Trigger: GCCAGAAATATTCAAAGAGGTGAGCAAGCTGGACCAGGCGGTGCAGGCGCTGAAAGTTGTCCAGGAAAATGGAACGCAGATTCTATACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 90 bp | AGAAATGGTGAATTTGCAACTATGATCACAAATGGGACCCCAAGGTaGAGCATCAGGCCAAAGCCACTCACCACTGACATGGCAACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RNGEFATMITNGTPR*SIRPKPLTTDMATE Trigger: TTCTGTTGCCATGTCAGTGGTGAGTGGCTTTGGCCTGATGCTGCACCTTGGGGTCCCATTTGTGATCATAGTTGCAAATTCACCATTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTTCACGGTCTTGGAGGTaGCCTCAAACTCCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IRLDSGHQELYNWFGLFVSRSWR*PQTPAA Trigger: GGCAGCTGGAGTTTGAGGCAACCTCCAAGACCGTGA...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACAGGTTCTCCTTTTCCTaGGGTAGGAAAATGAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHRFSFS*GRKMRP Trigger: CGGTCTCATTTTCCTACCCAAGGAAAAGGAGAACCT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACCGCCTGGTCCAGCTaGCTCACCTCTTTGAATATT | + |
|
Preference number: 5 (lower is better) Translates to: IRLDSGHQELYNWFGLFVTAWSS*LTSLNI Trigger: AATATTCAAAGAGGTGAGCAAGCTGGACCAGGCGGT...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTGGACTCCACGAGTCGTaGACTTTTTCCAGTCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRLDSGHQELYNWFGLFVGLHES*TFSSHL Trigger: CAAATGACTGGAAAAAGTCAACGACTCGTGGAGTCC...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACTTTTTCCAGTCATTaGACCCAAAACATTTCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IRLDSGHQELYNWFGLFVTFSSH*TQNISP Trigger: GGGGGAAATGTTTTGGGTCAAATGACTGGAAAAAGT...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACACTGCAACACACATCTaGTTTCTTATACAGTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHTATHI*FLIQSN Trigger: GTTGGACTGTATAAGAAACAAGATGTGTGTTGCAGT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTAGCACCACAATAAACTaGGCTTTGGAAGTGGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRLDSGHQELYNWFGLFVSTTIN*ALEVVR Trigger: TCTTACCACTTCCAAAGCCAAGTTTATTGTGGTGCT...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTATATAGGAATCATCACTaGCCAGGTTCCGAAGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: SDWIQAIRNCITGSGYLLYRNHH*PGSEDL Trigger: TAGATCTTCGGAACCTGGCAAGTGATGATTCCTATA...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | ATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTAGCAAAAGAGCAGGGTaGTTCCTGTATAGATGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: IHVYNVPCLYPTLPSLPSSKRAG*FLYRCK Trigger: TTTGCATCTATACAGGAACAACCCTGCTCTTTTGCT...AGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACACAATAAACTTGGCTTaGGAAGTGGTAAGAAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHTINLA*EVVRKG Trigger: TCCTTTTCTTACCACTTCCAAAGCCAAGTTTATTGT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | CATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCCCTCTCACACACCCCTATTATTGTaGAAATTGCACTTTGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: HVYNVPCLYPTLPSLPSHTPLLL*KLHFAT Trigger: TGTTGCAAAGTGCAATTTCAACAATAATAGGGGTGT...GTGAGAGGGAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | TCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACACACACCCCTATTATaGTTGAAATTGCACTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SDWIQAIRNCITGSGYLLHTPLL*LKLHFA Trigger: TGCAAAGTGCAATTTCAACAATAATAGGGGTGTGTG...TAACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | ATCAGACTGGATTCAGGCCATCAGGAATTGTATAACTGGTTCGGGTTATTTGTTACCTTTGAATATGAATaGGAGAGTCGTTCTCTTATG | + |
|
Preference number: 5 (lower is better) Translates to: IRLDSGHQELYNWFGLFVTFEYE*ESRSLM Trigger: CATAAGAGAACGACTCTCCAATTCATATTCAAAGGT...AACAAATAACCCGAACCAGTTATACAATTCCTGATGGCCTGAATCCAGTCTGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCGCTGCTATTCATGTATaGCATATATGCCTCCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: FSYMYTMCLVYILHYPPFAAIHV*HICLQP Trigger: TGGTTGGAGGCATATATGCAATACATGAATAGCAGC...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS-3UTR CAA 90 bp | TTTTCATACATGTATACAATGTGCCTTGTTTATATCCTACATTACCCTCCCTTCGCCTCAATAGACTTTTaGTTGACTGAAGGCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: FSYMYTMCLVYILHYPPFASIDF*LTEGSV Trigger: TACTGAGCCTTCAGTCAACAAAAAGTCTATTGAGGC...GAAGGGAGGGTAATGTAGGATATAAACAAGGCACATTGTATACATGTATGAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS TCA 90 bp | GTTAACACTTTCAGTAACAATGACCATAACTCTTGGACCATAATCTaGAAAGTAATCTTCCTCTACATTGAAGTAGGGGGTGATATAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VNTFSNNDHNSWTII*KVIFLYIEVGGDIG Trigger: TCCTATATCACCCCCTACTTCAATGTAGAGGAAGATTACTTTTCAGATTATGGTCCAAGAGTTATGGTCATTGTTACTGAAAGTGTTAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | GCAGCGACGCGGCGGAGGTGCCTCCTGACCCAGCGGTaGCAAGCGCTCCAGTGGCGGCCCGGTGGTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AATRRRCLLTQR*QALQWRPGGPA Trigger: AGCTGGACCACCGGGCCGCCACTGGAGCGCTTGCCACCGCTGGGTCAGGAGGCACCTCCGCCGCGTCGCTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | CCTCCCGCTGCTCCTCCGCCTCTCCGAGCTCCACCTTaGACGGTGACTCCCCCTGCTCCTCCTCTCCGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPAAPPPLRAPP*TVTPPAPPLRA Trigger: CGCCCGGAGAGGAGGAGCAGGGGGAGTCACCGTCCAAGGTGGAGCTCGGAGAGGCGGAGGAGCAGCGGGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CAA 72 bp | GCCTCCCGCTGCTCCTCCGCCTCTCCGAGCTCCACCTaGGACGGTGACTCCCCCTGCTCCTCCTCTCCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASRCSSASPSST*DGDSPCSSSPG Trigger: GCCCGGAGAGGAGGAGCAGGGGGAGTCACCGTCCAAGGTGGAGCTCGGAGAGGCGGAGGAGCAGCGGGAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CAA 90 bp | TCCAACGGTGCCTCCCGCTGCTCCTCCGCCTCTCCGAGCTCCACCTaGGACGGTGACTCCCCCTGCTCCTCCTCTCCGGGCGCCACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SNGASRCSSASPSST*DGDSPCSSSPGATL Trigger: CAAGGTGGCGCCCGGAGAGGAGGAGCAGGGGGAGTCACCGTCCAAGGTGGAGCTCGGAGAGGCGGAGGAGCAGCGGGAGGCACCGTTGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CAA 90 bp | GGTGGTCCAGCTAGGGCCCGCCTCATCAAGTGGCACGGCTTCCAGTaGGCCTTCCAACGGTGCCTCCCGCTGCTCCTCCGCCTCTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGPARARLIKWHGFQ*AFQRCLPLLLRLSE Trigger: CTCGGAGAGGCGGAGGAGCAGCGGGAGGCACCGTTGGAAGGCCAACTGGAAGCCGTGCCACTTGATGAGGCGGGCCCTAGCTGGACCACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | GCCTCTCCGAGCTCCACCTTGGACGGTGACTCCCCCTaGTCCTCCTCTCCGGGCGCCACCTTGGAGGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: ASPSSTLDGDSP*SSSPGATLEEI Trigger: GATCTCCTCCAAGGTGGCGCCCGGAGAGGAGGAGCAGGGGGAGTCACCGTCCAAGGTGGAGCTCGGAGAGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | CTAGGGCCCGCCTCATCAAGTGGCACGGCTTCCAGTTaGCCTTCCAACGGTGCCTCCCGCTGCTCCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LGPASSSGTASS*PSNGASRCSSA Trigger: GGCGGAGGAGCAGCGGGAGGCACCGTTGGAAGGCCAACTGGAAGCCGTGCCACTTGATGAGGCGGGCCCTAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | CGGCCCGGTGGTCCAGCTAGGGCCCGCCTCATCAAGTaGCACGGCTTCCAGTTGGCCTTCCAACGGTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RPGGPARARLIK*HGFQLAFQRCL Trigger: GAGGCACCGTTGGAAGGCCAACTGGAAGCCGTGCCACTTGATGAGGCGGGCCCTAGCTGGACCACCGGGCCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | ATCAAGTGGCACGGCTTCCAGTTGGCCTTCCAACGGTaGCTCCCGCTGCTCCTCCGCCTCTCCGAGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: IKWHGFQLAFQR*LPLLLRLSELH Trigger: GTGGAGCTCGGAGAGGCGGAGGAGCAGCGGGAGGCACCGTTGGAAGGCCAACTGGAAGCCGTGCCACTTGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | GACCCTGCACAAAACGCCGCTCTGCCTTGGCTGGGCTaGCAATCGGTGTGTACTGCTCCTCCAGGTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: DPAQNAALPWLG*QSVCTAPPGSP Trigger: AGGAGAACCTGGAGGAGCAGTACACACCGATTGGCAGCCCAGCCAAGGCAGAGCGGCGTTTTGTGCAGGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | GGGAAGGTGAGGTCCGACAGGTTCAACGACGAGTTATaGTGCCAGGAAAACAGCAGAGGGTTGGGCGGCACG | + |
|
Preference number: 6 (lower is better) Translates to: GKVRSDRFNDEL*CQENSRGLGGT Trigger: CGTGCCGCCCAACCCTCTGCTGTTTTCCTGGCAGCATAACTCGTCGTTGAACCTGTCGGACCTCACCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | AAGGTGAGGTCCGACAGGTTCAACGACGAGTTATGCTaGCAGGAAAACAGCAGAGGGTTGGGCGGCACGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KVRSDRFNDELC*QENSRGLGGTH Trigger: GTGCGTGCCGCCCAACCCTCTGCTGTTTTCCTGGCAGCATAACTCGTCGTTGAACCTGTCGGACCTCACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | AGTTGGCGAGGGACACCACCAAGATGGATGCAAAGTTaGTCTCGGAGCTGGTCCTGGAGGCAGAGAAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SWRGTPPRWMQS*SRSWSWRQRSG Trigger: ACCGCTTCTCTGCCTCCAGGACCAGCTCCGAGACCAACTTTGCATCCATCTTGGTGGTGTCCCTCGCCAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | CGCTCTGCCTTGGCTGGGCTGCCAATCGGTGTGTACTaGTCCTCCAGGTTCTCCTTTTCCTTGGGTAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: RSALAGLPIGVY*SSRFSFSLGRK Trigger: TTTCCTACCCAAGGAAAAGGAGAACCTGGAGGAGCAGTACACACCGATTGGCAGCCCAGCCAAGGCAGAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | ACGACGAGTTATGCTGCCAGGAAAACAGCAGAGGGTTaGGCGGCACGCACAGCGTCTTGTACTTGGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: TTSYAARKTAEG*AARTASCTWHT Trigger: TGTGTGCCAAGTACAAGACGCTGTGCGTGCCGCCCAACCCTCTGCTGTTTTCCTGGCAGCATAACTCGTCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CAA 72 bp | AACGACGAGTTATGCTGCCAGGAAAACAGCAGAGGGTaGGGCGGCACGCACAGCGTCTTGTACTTGGCACAC | + |
|
Preference number: 6 (lower is better) Translates to: NDELCCQENSRG*GGTHSVLYLAH Trigger: GTGTGCCAAGTACAAGACGCTGTGCGTGCCGCCCAACCCTCTGCTGTTTTCCTGGCAGCATAACTCGTCGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | CACACCTCTTGGTATAGAATCTGCGTTCCATTTTCCTaGACAACTTTCAGCGCCTGCACCGCCTGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HTSWYRICVPFS*TTFSACTAWSS Trigger: GCTGGACCAGGCGGTGCAGGCGCTGAAAGTTGTCCAGGAAAATGGAACGCAGATTCTATACCAAGAGGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CAA 72 bp | TGGACAACTTTCAGCGCCTGCACCGCCTGGTCCAGCTaGCTCACCTCTTTGAATATTTCTGGCTCCAGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: WTTFSACTAWSS*LTSLNISGSSS Trigger: ACTGCTGGAGCCAGAAATATTCAAAGAGGTGAGCAAGCTGGACCAGGCGGTGCAGGCGCTGAAAGTTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | ATCTGCGTTCCATTTTCCTGGACAACTTTCAGCGCCTaGACCGCCTGGTCCAGCTTGCTCACCTCTTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ICVPFSWTTFSA*TAWSSLLTSLN Trigger: ATTCAAAGAGGTGAGCAAGCTGGACCAGGCGGTGCAGGCGCTGAAAGTTGTCCAGGAAAATGGAACGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | CCATTTTCCTGGACAACTTTCAGCGCCTGCACCGCCTaGTCCAGCTTGCTCACCTCTTTGAATATTTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PFSWTTFSACTA*SSLLTSLNISG Trigger: GCCAGAAATATTCAAAGAGGTGAGCAAGCTGGACCAGGCGGTGCAGGCGCTGAAAGTTGTCCAGGAAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CAA 72 bp | ATGCCAAGTGAAACAGGGGGATCACGGTCTTGGAGGTaGCCTCAAACTCCAGCTGCCTGGAAAGGGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: MPSETGGSRSWR*PQTPAAWKGMK Trigger: TTTCATCCCTTTCCAGGCAGCTGGAGTTTGAGGCAACCTCCAAGACCGTGATCCCCCTGTTTCACTTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS TCA 72 bp | CTTGCTCACCTCTTTGAATATTTCTGGCTCCAGCAGTaGGTTGGCGAGGGACACCACCAAGATGGATGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LAHLFEYFWLQQ*VGEGHHQDGCK Trigger: TTTGCATCCATCTTGGTGGTGTCCCTCGCCAACTCACTGCTGGAGCCAGAAATATTCAAAGAGGTGAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS GCA 72 bp | CATGTCATTAAAATGGTCAAGAAAGTGAGTCAGCCATaGCTGGCTACGTTCACTGTCTTCGGGGTCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: HVIKMVKKVSQP*LATFTVFGVLR Trigger: ACGGAGGACCCCGAAGACAGTGAACGTAGCCAGGCATGGCTGACTCACTTTCTTGACCATTTTAATGACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
||
| CDS CCA 72 bp | GGCACGCACAGCGTCTTGTACTTGGCACACACCTCTTaGTATAGAATCTGCGTTCCATTTTCCTGGACAACT | + |
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Preference number: 6 (lower is better) Translates to: GTHSVLYLAHTS*YRICVPFSWTT Trigger: AGTTGTCCAGGAAAATGGAACGCAGATTCTATACCAAGAGGTGTGTGCCAAGTACAAGACGCTGTGCGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS CAA 72 bp | CTCACCTCTTTGAATATTTCTGGCTCCAGCAGTGAGTaGGCGAGGGACACCACCAAGATGGATGCAAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LTSLNISGSSSE*ARDTTKMDAKL Trigger: CAACTTTGCATCCATCTTGGTGGTGTCCCTCGCCAACTCACTGCTGGAGCCAGAAATATTCAAAGAGGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS GCA 72 bp | CCACCTTTGAATATGAATTGGAGAGTCGTTCTCTTATaGTCTCTGAGAGGCTGGTCTTCTGCCAGGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: PPLNMNWRVVLL*SLRGWSSARQK Trigger: TTTCTGCCTGGCAGAAGACCAGCCTCTCAGAGAGCATAAGAGAACGACTCTCCAATTCATATTCAAAGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS GCA 72 bp | TCATCACTTGCCAGGTTCCGAAGATCTAACCCTTCTTaGACTTGGAAGCACCCATATATACTGCTTATGATA | + |
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Preference number: 6 (lower is better) Translates to: SSLARFRRSNPS*TWKHPYILLMI Trigger: TATCATAAGCAGTATATATGGGTGCTTCCAAGTGCAAGAAGGGTTAGATCTTCGGAACCTGGCAAGTGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS CAA 72 bp | GCAACAGAAAACACTCCAAAGACTGCAACACACATCTaGTTTCTTATACAGTCCAACCTGGAGCATGATACA | + |
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Preference number: 6 (lower is better) Translates to: ATENTPKTATHI*FLIQSNLEHDT Trigger: TGTATCATGCTCCAGGTTGGACTGTATAAGAAACAAGATGTGTGTTGCAGTCTTTGGAGTGTTTTCTGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS CAA 72 bp | AAGAACAAATTCATTGGATGGTTATCTTCTCCATGTTaGTCTATCAATGAACCGAATGGGACACAGCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: KNKFIGWLSSPC*SINEPNGTQQD Trigger: GTCCTGCTGTGTCCCATTCGGTTCATTGATAGACAAACATGGAGAAGATAACCATCCAATGAATTTGTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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| CDS GCA 72 bp | AGGATTATTTCCGCTGCTATTCATGTATTGCATATATaGCTCCAACCAAAACTCTGTGAGATTTTTATCTAC | + |
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Preference number: 6 (lower is better) Translates to: RIISAAIHVLHI*LQPKLCEIFIY Trigger: GTAGATAAAAATCTCACAGAGTTTTGGTTGGAGGCATATATGCAATACATGAATAGCAGCGGAAATAATCCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036690.7 |
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