RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PTCH1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021466

Ensembl transcript IDs: ENSMUST00000021921.11, ENSMUST00000192155.6, ENSMUST00000193953.6, ENSMUST00000194663.6, ENSMUST00000195106.2, ENSMUST00000195258.7, ENSMUST00000195756.6

Found 626 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCACAGAGCTGCCCATGGCGGTGGACGTTGGGTTCCGAGGGTTGTaGGAACGGGCCCCACGGGGCCCTGAGCGGTCCCTATTGCTAGGG +
Preference number: 1 (lower is better)
Translates to: GTELPMAVDVGFRGL*ERAPRGPERSLLLG
Trigger: CCCTAGCAATAGGGACCGCTCAGGGCCCCGTGGGGCCCGTTCTCACAACCCTCGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 90 bp GCACGGCAAACCGGACGACACTTGGAGGCGGCTCAGGCGAAGGAGTaGGCAGTCGGTTTAGGCCATTGGCTGGAGACACCTCAGGACACG +
Preference number: 1 (lower is better)
Translates to: ARQTGRHLEAAQAKE*AVGLGHWLETPQDT
Trigger: CGTGTCCTGAGGTGTCTCCAGCCAATGGCCTAAACCGACTGCCCACTCCTTCGCCTGAGCCGCCTCCAAGTGTCGTCCGGTTTGCCGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 90 bp GGCCCTTGGAAGCACCACGGGGATACCTCTGGCACACACCTCAGTTaGAGCTGCTCCCCCACGGCCTCTCCTCACATTCCACGTCCTGTA +
Preference number: 1 (lower is better)
Translates to: GPWKHHGDTSGTHLS*SCSPTASPHIPRPV
Trigger: TACAGGACGTGGAATGTGAGGAGAGGCCGTGGGGGAGCAGCTCCAACTGAGGTGTGTGCCAGAGGTATCCCCGTGGTGCTTCCAAGGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR TCA 90 bp GGACGTTGGGTTCCGAGGGTTGTGAGAACGGGCCCCACGGGGCCCTaGGCGGTCCCTATTGCTAGGGCCAGAATGCCCTTCAGTAGAAAT +
Preference number: 1 (lower is better)
Translates to: GRWVPRVVRTGPTGP*AVPIARARMPFSRN
Trigger: ATTTCTACTGAAGGGCATTCTGGCCCTAGCAATAGGGACCGCTCAGGGCCCCGTGGGGCCCGTTCTCACAACCCTCGGAACCCAACGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 90 bp ACCAAGGTAAACCTGTCAGCCAGGGCCCGCCTCTGGTCAGCACTCTaGACAGCTGGAGGGCGCACACTCCACGCAAGGATGCTTTTCTGG +
Preference number: 1 (lower is better)
Translates to: TKVNLSARARLWSAL*TAGGRTLHARMLFW
Trigger: CCAGAAAAGCATCCTTGCGTGGAGTGTGCGCCCTCCAGCTGTGCAGAGTGCTGACCAGAGGCGGGCCCTGGCTGACAGGTTTACCTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 90 bp TTCTGCAAAGAAAACGCTGCCCATTCTGTGAGAGCCGGGGCATTGTaGAGGGCGAGGGCACTCCACAATGGCAGGGCTGCTCTGCAGGCC +
Preference number: 1 (lower is better)
Translates to: FCKENAAHSVRAGAL*RARALHNGRAALQA
Trigger: GGCCTGCAGAGCAGCCCTGCCATTGTGGAGTGCCCTCGCCCTGCACAATGCCCCGGCTCTCACAGAATGGGCAGCGTTTTCTTTGCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 90 bp GACCGGGCAAAGACAGGGTTTTCTGTGGCTTCCACAATCACTTGGTaGGCAGGGCCTCCGGCACCCTGCTGTGCTTCGTATTGCCTGAGC +
Preference number: 1 (lower is better)
Translates to: DRAKTGFSVASTITW*AGPPAPCCASYCLS
Trigger: GCTCAGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTTTGCCCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 90 bp GTGGACCGGGCAAAGACAGGGTTTTCTGTGGCTTCCACAATCACTTaGTGGGCAGGGCCTCCGGCACCCTGCTGTGCTTCGTATTGCCTG +
Preference number: 1 (lower is better)
Translates to: VDRAKTGFSVASTIT*WAGPPAPCCASYCL
Trigger: CAGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTTTGCCCGGTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 90 bp AACTGGGAGAGCAGGTCCCTGGTAGAGCTGGTGCTCTCGGGACTCTaGCAGCTGAGGTTGTCCTGGGTGACGGTAACAGGCTGTACAGAG +
Preference number: 1 (lower is better)
Translates to: NWESRSLVELVLSGL*QLRLSWVTVTGCTE
Trigger: CTCTGTACAGCCTGTTACCGTCACCCAGGACAACCTCAGCTGTCAGAGTCCCGAGAGCACCAGCTCTACCAGGGACCTGCTCTCCCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 90 bp CCCAGCAGAGTGGACACAGCACCGTCCAGAACGGGAGCAAACATGTaGTCCAGAGCGAGCATAGCCCTGTGGTTCTTGTCCCCAATGGCT +
Preference number: 1 (lower is better)
Translates to: PSRVDTAPSRTGANM*SRASIALWFLSPMA
Trigger: AGCCATTGGGGACAAGAACCACAGGGCTATGCTCGCTCTGGAGCACATGTTTGCTCCCGTTCTGGACGGTGCTGTGTCCACTCTGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 90 bp AAACCTGTCAGCCAGGGCCCGCCTCTGGTCAGCACTCTGCACAGCTaGAGGGCGCACACTCCACGCAAGGATGCTTTTCTGGAACTAATG +
Preference number: 1 (lower is better)
Translates to: KPVSQGPPLVSTLHS*RAHTPRKDAFLELM
Trigger: CATTAGTTCCAGAAAAGCATCCTTGCGTGGAGTGTGCGCCCTCCAGCTGTGCAGAGTGCTGACCAGAGGCGGGCCCTGGCTGACAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 90 bp GTTGTCCTGGGTGACGGTAACAGGCTGTACAGAGATCTCAGAGCGTaGCTCGGCGGTGGTGTAGTACACGTGCGTGTGAGGGTCATACTC +
Preference number: 1 (lower is better)
Translates to: VVLGDGNRLYRDLRA*LGGGVVHVRVRVIL
Trigger: GAGTATGACCCTCACACGCACGTGTACTACACCACCGCCGAGCCACGCTCTGAGATCTCTGTACAGCCTGTTACCGTCACCCAGGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 90 bp TTGGAGGCGGCTCAGGCGAAGGAGTGGGCAGTCGGTTTAGGCCATTaGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGA +
Preference number: 1 (lower is better)
Translates to: LEAAQAKEWAVGLGH*LETPQDTVQRRIRG
Trigger: TCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGGCCTAAACCGACTGCCCACTCCTTCGCCTGAGCCGCCTCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 90 bp TCCAGAACGGGAGCAAACATGTGCTCCAGAGCGAGCATAGCCCTGTaGTTCTTGTCCCCAATGGCTGTCAGAAAGGCCAAAGCCACGTGG +
Preference number: 1 (lower is better)
Translates to: SRTGANMCSRASIAL*FLSPMAVRKAKATW
Trigger: CCACGTGGCTTTGGCCTTTCTGACAGCCATTGGGGACAAGAACCACAGGGCTATGCTCGCTCTGGAGCACATGTTTGCTCCCGTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 90 bp GAATGGCCAGGACGGCAAAGAAGTATCTGGAAGACAAAAGGGATATaGGACATGTCAGCGAGGAAGGAGAGCATTCCACGCCCCCGGGCG +
Preference number: 1 (lower is better)
Translates to: EWPGRQRSIWKTKGI*DMSARKESIPRPRA
Trigger: CGCCCGGGGGCGTGGAATGCTCTCCTTCCTCGCTGACATGTCCCATATCCCTTTTGTCTTCCAGATACTTCTTTGCCGTCCTGGCCATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 90 bp GAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATaGGGGACACAATCAAGAACCACAGCCAAGGTGGCTTCCGCACTC +
Preference number: 1 (lower is better)
Translates to: EAVQTSFCHMHKAQA*GTQSRTTAKVASAL
Trigger: GAGTGCGGAAGCCACCTTGGCTGTGGTTCTTGATTGTGTCCCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 90 bp AAGACCGACATGCCAGAAGCTTGGCAATGCCTCAAGGCTGGTCAATaGACTCACACCCTTTCTTTTTCCTCCTCTCCTCGTGGGGGACTG +
Preference number: 1 (lower is better)
Translates to: KTDMPEAWQCLKAGQ*THTLSFSSSPRGGL
Trigger: CAGTCCCCCACGAGGAGAGGAGGAAAAAGAAAGGGTGTGAGTTCATTGACCAGCCTTGAGGCATTGCCAAGCTTCTGGCATGTCGGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 90 bp ACCGTGTGGAAAAGAGTCCTTAGAAACTCTCCCCACACAGTTGACTaGACCACGATTAGCCTAGCCTGCTCCAACCAGGCAGTCATAGCA +
Preference number: 1 (lower is better)
Translates to: TVWKRVLRNSPHTVD*TTISLACSNQAVIA
Trigger: TGCTATGACTGCCTGGTTGGAGCAGGCTAGGCTAATCGTGGTTCAGTCAACTGTGTGGGGAGAGTTTCTAAGGACTCTTTTCCACACGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 90 bp CAGGACGGCAAAGAAGTATCTGACAATGAAATCAAATTCGGACCCTaGAAGCATCAGTACACCCAGCAGAGTGGACACAGCACCGTCCAG +
Preference number: 1 (lower is better)
Translates to: QDGKEVSDNEIKFGP*KHQYTQQSGHSTVQ
Trigger: CTGGACGGTGCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCAGGGTCCGAATTTGATTTCATTGTCAGATACTTCTTTGCCGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR GCA 90 bp AGCGGTCAGGTAGATGTAGAAAGCGCTCGGATTAATGATGCCATCTaGGTCTACCAGACGCTGTTTAGTCAACTGACTAATGTCGATGGG +
Preference number: 1 (lower is better)
Translates to: SGQVDVESARINDAI*VYQTLFSQLTNVDG
Trigger: CCCATCGACATTAGTCAGTTGACTAAACAGCGTCTGGTAGACGCAGATGGCATCATTAATCCGAGCGCTTTCTACATCTACCTGACCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 90 bp GTAGAATTTAAACAATTTGGCGCAGGAGGAAAAGCAGCCCACTTCTaGAGGCAGCTAATCCACTGTGAAATGCCCCTGCCTCTTACAGCA +
Preference number: 1 (lower is better)
Translates to: VEFKQFGAGGKAAHF*RQLIHCEMPLPLTA
Trigger: TGCTGTAAGAGGCAGGGGCATTTCACAGTGGATTAGCTGCCTGCAGAAGTGGGCTGCTTTTCCTCCTGCGCCAAATTGTTTAAATTCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 90 bp ATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTaGATGGATGCTAACAGTGGGGAAGAGAAGAAAGTATACACAGGA +
Preference number: 1 (lower is better)
Translates to: MLLRGGIFLLSQTSH*MDANSGEEKKVYTG
Trigger: TCCTGTGTATACTTTCTTCTCTTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 90 bp TTAGAGTCTCTAAATTTGACCCTGCAGTCAGGTACCCAGCATTTATaGAGCCTCAGAAGGGACCCAAACACAAAATCTGGGTACACTGTA +
Preference number: 1 (lower is better)
Translates to: LESLNLTLQSGTQHL*SLRRDPNTKSGYTV
Trigger: TACAGTGTACCCAGATTTTGTGTTTGGGTCCCTTCTGAGGCTTCATAAATGCTGGGTACCTGACTGCAGGGTCAAATTTAGAGACTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 90 bp AACCTTGGGGAAGGAGAACACAATCAAACTCTAAAGCCCAACACCTaGTTCAAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTT +
Preference number: 1 (lower is better)
Translates to: NLGEGEHNQTLKPNT*FKELTLYAFTRWHL
Trigger: AAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTTGAACCAGGTGTTGGGCTTTAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 90 bp AACTTACCCTACTTGGCCAGCCTGTGTGTACACACATGTAAAGCTTaGTTAGTGCCAGATGTGGTAGCACATGCCTATAATTTTAGCACT +
Preference number: 1 (lower is better)
Translates to: NLPYLASLCVHTCKA*LVPDVVAHAYNFST
Trigger: AGTGCTAAAATTATAGGCATGTGCTACCACATCTGGCACTAATCAAGCTTTACATGTGTGTACACACAGGCTGGCCAAGTAGGGTAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 90 bp GCAACAACAACAACAAACCACAATACAGTACATTGGAAAGTCACATaGACACACACATCCACCCATGCGAACCATATACAACTACCCCTA +
Preference number: 1 (lower is better)
Translates to: ATTTTNHNTVHWKVT*THTSTHANHIQLPL
Trigger: TAGGGGTAGTTGTATATGGTTCGCATGGGTGGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGTTGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 90 bp GATGTTATTTATGAACGTGTTACACCAACACAGGAATATGGAATGTaGGCTGAATGGCTGAGCACCCTGAAAGTACAGATACAATGCTGG +
Preference number: 1 (lower is better)
Translates to: DVIYERVTPTQEYGM*AEWLSTLKVQIQCW
Trigger: CCAGCATTGTATCTGTACTTTCAGGGTGCTCAGCCATTCAGCTCACATTCCATATTCCTGTGTTGGTGTAACACGTTCATAAATAACATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 90 bp CACCCTGTAAAGTCATCTGCATGGTTGTTAGAACTCTGCTGTAAGTaGCCAGCAAACAGGTACAAGGTTAAACTATTAAACTGGCATTCT +
Preference number: 1 (lower is better)
Translates to: HPVKSSAWLLELCCK*PANRYKVKLLNWHS
Trigger: AGAATGCCAGTTTAATAGTTTAACCTTGTACCTGTTTGCTGGGCACTTACAGCAGAGTTCTAACAACCATGCAGATGACTTTACAGGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR TCA 90 bp CCAAACCAGGATCTAAGAGCAACTATCTCAATGGTATTTGGCAAATaGGAATCTAATGAGTGGTTCACCAACTTACCAATAGGCTGTGTG +
Preference number: 1 (lower is better)
Translates to: PNQDLRATISMVFGK*ESNEWFTNLPIGCV
Trigger: CACACAGCCTATTGGTAAGTTGGTGAACCACTCATTAGATTCTCATTTGCCAAATACCATTGAGATAGTTGCTCTTAGATCCTGGTTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CAA 90 bp TGGGCTGGCAGTAGCTGGGCACAGAGCTGCCCATGGCGGTGGACGTaGGGTTCCGAGGGTTGTGAGAACGGGCCCCACGGGGCCCTGAGC +
Preference number: 2 (lower is better)
Translates to: WAGSSWAQSCPWRWT*GSEGCENGPHGALS
Trigger: GCTCAGGGCCCCGTGGGGCCCGTTCTCACAACCCTCGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCTACTGCCAGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GAGGCTGCTGGCCTTGCCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTGGGGCTGCTCCTCAGCTGACTTaGCCTGCAAGGTCTCCGCAC +
Preference number: 2 (lower is better)
Translates to: EAAGLAVQGTRSQSPGGAAPQLT*PARSPH
Trigger: GTGCGGAGACCTTGCAGGTCAAGTCAGCTGAGGAGC...AGCCCCACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCCACTCCGGCCGGTGAGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGAGCGTGGCTCGGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 2 (lower is better)
Translates to: PTPAGEAGCWPGRQRKLQSVARR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCCGAGCCACGCT...CTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GGGCTGGCAGTAGCTGGGCACAGAGCTGCCCATGGCGGTGGACGTTGGGTTCCGCGCAGGCTGATGTATTaGTCCCAGAACAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: GLAVAGHRAAHGGGRWVPRRLMY*SQNRKG
Trigger: CCCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCG...CGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCTACTGCCAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCGGTGAGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGGGTCGTTGCTAGCGTGGCTCGGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 2 (lower is better)
Translates to: PVRPDVGLGGSVSYRVVASVARR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCCGAGCCACGCT...AGCAACGACCCTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCCACTCCGGCCGGTGAGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGAGAGATCTCAGAGCGTaGCTCGGCGGTGGTGTAGTA +
Preference number: 2 (lower is better)
Translates to: PTPAGEAGCWPGRQRKLQRDLRA*LGGGVV
Trigger: TACTACACCACCGCCGAGCCACGCTCTGAGATCTCT...CTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp TGGCCCTTGGAAGCACCACGGGGATACCTCTGGCACACACCTCAGTaGGAGCTGCTCCCCCACGGCCTCTCCTCACATTCCACGTCCTGT +
Preference number: 2 (lower is better)
Translates to: WPLEAPRGYLWHTPQ*ELLPHGLSSHSTSC
Trigger: ACAGGACGTGGAATGTGAGGAGAGGCCGTGGGGGAGCAGCTCCAACTGAGGTGTGTGCCAGAGGTATCCCCGTGGTGCTTCCAAGGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR-3UTR CCA 90 bp GGGCTGGCAGTAGCTGGGCACAGAGCTGCCCATGGCGGTGGACGTTGGGTTCCGCGACAGAAAAAGACCTaGACCTTCCCAGCCCACCTA +
Preference number: 2 (lower is better)
Translates to: GLAVAGHRAAHGGGRWVPRQKKT*TFPAHL
Trigger: TAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGTCG...CGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCTACTGCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GAGGCTGCTGGCCTTGCCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTGGGGCTCTGACTTTAGTCTCCTaGCAGCTCTGTGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: EAAGLAVQGTRSQSPGGALTLVS*QLCVLP
Trigger: AGGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAG...AGCCCCACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCGGGCCACCGCTCAGATaGCCCTTGGAAGCACCACGG +
Preference number: 2 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPGPPLR*PLEAPR
Trigger: CCGTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCC...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCTCCCTTCGAGGCTGCTaGCCTTGCCGTCCAGGGGAC +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGSLRGC*PCRPGD
Trigger: GTCCCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGA...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp GCTTTCTGCAAAGAAAACGCTGCCCATTCTGTGAGAGCCGGGGCATaGTGCAGGGCGAGGGCACTCCACAATGGCAGGGCTGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: AFCKENAAHSVRAGA*CRARALHNGRAALQ
Trigger: CTGCAGAGCAGCCCTGCCATTGTGGAGTGCCCTCGCCCTGCACAATGCCCCGGCTCTCACAGAATGGGCAGCGTTTTCTTTGCAGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCAACCCACTCCGGCCGGTaGGGCCGGATGTTGGCCTGG +
Preference number: 2 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPTHSGR*GRMLAW
Trigger: CCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGGT...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GAGGCTGCTGGCCTTGCCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTGGGGCTGTACAAACTTCCTTCTaGCACATGCACAAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: EAAGLAVQGTRSQSPGGAVQTSF*HMHKAQ
Trigger: CTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTAC...AGCCCCACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp CTTGGAGGCGGCTCAGGCGAAGGAGTGGGCAGTCGGTTTAGGCCATaGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGG +
Preference number: 2 (lower is better)
Translates to: LGGGSGEGVGSRFRP*AGDTSGHGPKKDKR
Trigger: CCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGGCCTAAACCGACTGCCCACTCCTTCGCCTGAGCCGCCTCCAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp AGTGGACCGGGCAAAGACAGGGTTTTCTGTGGCTTCCACAATCACTaGGTGGGCAGGGCCTCCGGCACCCTGCTGTGCTTCGTATTGCCT +
Preference number: 2 (lower is better)
Translates to: SGPGKDRVFCGFHNH*VGRASGTLLCFVLP
Trigger: AGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTTTGCCCGGTCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GAAAGGGAACTGAGCGTACTCGATGGGCTCTGCTGCTGGGATTCTCAGCCTGGTGGGGAACAATGTCCGTaGGGTCCAGCCCGTCTCTCA +
Preference number: 2 (lower is better)
Translates to: ERELSVLDGLCCWDSQPGGEQCP*GPARLS
Trigger: TGAGAGACGGGCTGGACCTCACGGACATTGTTCCCC...ACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGTTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp ACGGGAGCAAACATGTGCTCCAGAGCGAGCATAGCCCTGTGGTTCTaGTCCCCAATGGCTGTCAGAAAGGCCAAAGCCACGTGGACGGTG +
Preference number: 2 (lower is better)
Translates to: TGANMCSRASIALWF*SPMAVRKAKATWTV
Trigger: CACCGTCCACGTGGCTTTGGCCTTTCTGACAGCCATTGGGGACAAGAACCACAGGGCTATGCTCGCTCTGGAGCACATGTTTGCTCCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CCATTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCTGGTCCCATAAAGGCTaGCCCCCAGCAAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: PLAGDTSGHGPKKDKRTGWSHKG*PPASPG
Trigger: TCCTGGGCTTGCTGGGGGTCAGCCTTTATGGGACCA...GCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGAACTCTGCTGTAAGTaGCCAGCAAACAGGTACAAG +
Preference number: 2 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHELCCK*PANRYK
Trigger: CTTGTACCTGTTTGCTGGGCACTTACAGCAGAGTTC...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CCA 90 bp CATCAGAGCCAGGACCATGACAATGATCCCGGCCGTCCAGGGGTTCAGGAGGAATTTTGGGCCTGTATCTaGAGTATGGGGGTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: HQSQDHDNDPGRPGVQEEFWACI*SMGVGG
Trigger: GCCTCCCACCCCCATACTCCAGATACAGGCCCAAAA...TTCCTCCTGAACCCCTGGACGGCCGGGATCATTGTCATGGTCCTGGCTCTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CATCAGAGCCAGGACCATGACAATGATCCCGGCCGTCCAGGGGTTCAGGAGGAACTGGAGTCTGAGAACTaGGAGAGCAGGTCCCTGGTA +
Preference number: 2 (lower is better)
Translates to: HQSQDHDNDPGRPGVQEELESEN*ESRSLV
Trigger: TACCAGGGACCTGCTCTCCCAGTTCTCAGACTCCAG...TTCCTCCTGAACCCCTGGACGGCCGGGATCATTGTCATGGTCCTGGCTCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CAACTGACTAATGTCGATGGGCTTGTCTCGGCTGCCAGTCTGCACCAGGAGTTTGGGGGCTCGAGGCAGTaGAGGCTGGAGTCTGAGAAC +
Preference number: 2 (lower is better)
Translates to: QLTNVDGLVSAASLHQEFGGSRQ*RLESEN
Trigger: GTTCTCAGACTCCAGCCTCCACTGCCTCGAGCCCCC...AAACTCCTGGTGCAGACTGGCAGCCGAGACAAGCCCATCGACATTAGTCAGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CATCAGAGCCAGGACCATGACAATGATCCCGGCCGTCCAGGGGTTCAGGAGGAAAGCCATTGGGGTAGCTaGACAGTCCCAGGCTCGTAT +
Preference number: 2 (lower is better)
Translates to: HQSQDHDNDPGRPGVQEESHWGS*TVPGSY
Trigger: ATACGAGCCTGGGACTGTCCAGCTACCCCAATGGCT...TTCCTCCTGAACCCCTGGACGGCCGGGATCATTGTCATGGTCCTGGCTCTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCGGAAGGGGTAGCCATTaGGGTAGCTGGACAGTCCCA +
Preference number: 2 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPGRGSH*GSWTVP
Trigger: TGGGACTGTCCAGCTACCCCAATGGCTACCCCTTCC...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGGTGGAGGCTGGAGTCTaGGAACTGGGAGAGCAGGTC +
Preference number: 2 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVVEAGV*ELGEQV
Trigger: GACCTGCTCTCCCAGTTCTCAGACTCCAGCCTCCAC...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCGCCAGTGGCGCAGGCTaGTGTATTGCTCCCAGAACA +
Preference number: 2 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSASGAG*CIAPRT
Trigger: TGTTCTGGGAGCAATACATCAGCCTGCGCCACTGGC...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCAGATGGGCTTGTCTCGGCTaGCAGTCTGCACCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: AGDTSGHGPKKDKRTGSRWACLG*QSAPGV
Trigger: AACTCCTGGTGCAGACTGGCAGCCGAGACAAGCCCA...TCTGCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCCTCGATGGGCTCTGCTaGTGGGATTCTCAGCCTGGT +
Preference number: 2 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSLDGLC*WDSQPG
Trigger: ACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAG...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCCGCAGGCTGATGTATTaGTCCCAGAACAGGAAGGGG +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGRRLMY*SQNRKG
Trigger: CCCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCG...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAAGGGCCACCGCTCAGATaGCCCTTGGAAGCACCACGG +
Preference number: 2 (lower is better)
Translates to: GIFLLSQTSHWMDANSGEGPPLR*PLEAPR
Trigger: CCGTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCC...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CCA 90 bp AGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGGGTCGTTGCTGACCCAGGATTACCACAACCTTaGCTTTGGGTTTCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: RPDVGLGGSVSYRVVADPGLPQP*LWVSGG
Trigger: TCCTCCTGAAACCCAAAGCCAAGGTTGTGGTAATCC...TGGGTCAGCAACGACCCTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCGATAGCAGCAGCCAGTaGCGCAGGCTGATGTATTGC +
Preference number: 2 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPDSSSQ*RRLMYC
Trigger: GCAATACATCAGCCTGCGCCACTGGCTGCTGCTATC...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GAGGCTGCTGGCCTTGCCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTGGGGCTAAACTGTGGAACTTTTaGTGGAGGCATATATCAACG +
Preference number: 2 (lower is better)
Translates to: EAAGLAVQGTRSQSPGGAKLWNF*WRHIST
Trigger: CGTTGATATATGCCTCCACCAAAAGTTCCACAGTTT...AGCCCCACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CTGGAAGACAAAAGGGATATGGGACATGTCAGCGAGGAAGGAGAGCATTCCACGAGCACTCTGCACAGCTaGAGGGCGCACACTCCACGC +
Preference number: 2 (lower is better)
Translates to: LEDKRDMGHVSEEGEHSTSTLHS*RAHTPR
Trigger: GCGTGGAGTGTGCGCCCTCCAGCTGTGCAGAGTGCT...CGTGGAATGCTCTCCTTCCTCGCTGACATGTCCCATATCCCTTTTGTCTTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACAAATCTGGCTTCTCTTaGATAGTCCCAGAGAATAGG +
Preference number: 2 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHKSGFS*IVPENR
Trigger: CCTATTCTCTGGGACTATTCAAGAGAAGCCAGATTT...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR TCA 90 bp GAGGCTGCTGGCCTTGCCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTGGGGCTGACAAAATAAAACTATaGGAGAGACAGACAGAGACA +
Preference number: 2 (lower is better)
Translates to: EAAGLAVQGTRSQSPGGADKIKL*ERQTET
Trigger: TGTCTCTGTCTGTCTCTCTCATAGTTTTATTTTGTC...AGCCCCACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCGGGGAACAATGTCCGTaGGGTCCAGCCCGTCTCTCA +
Preference number: 2 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSGEQCP*GPARLS
Trigger: TGAGAGACGGGCTGGACCTCACGGACATTGTTCCCC...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCAGGCCAGCACCACGCTaGTGGATAGCAGCAGCCAGT +
Preference number: 2 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSRPAPR*WIAAAS
Trigger: ACTGGCTGCTGCTATCCATCAGCGTGGTGCTGGCCT...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCCTTCCTTCTGCCACATaGACAAGGCTCAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPLPSAT*TRLRHE
Trigger: CTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAG...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCCTTCCTTCTGCCACATaGACAAGGCTCAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGLPSAT*TRLRHE
Trigger: CTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAG...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGGCTCTTTACTCCCAGTaGGCAGCTGAGAGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRALYSQ*AAESPE
Trigger: TTCAGGGCTCTCAGCTGCCCACTGGGAGTAAAGAGC...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCCGACAGAAAAAGACCTaGACCTTCCCAGCCCACCTA +
Preference number: 2 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPRQKKT*TFPAHL
Trigger: TAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGTCG...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCCGACAGAAAAAGACCTaGACCTTCCCAGCCCACCTA +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGRQKKT*TFPAHL
Trigger: TAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGTCG...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCCCACCACAGCAGCCTTaGGAGAACTTAGCGTACTGG +
Preference number: 2 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSPPQQP*ENLAYW
Trigger: CCAGTACGCTAAGTTCTCCCAAGGCTGCTGTGGTGG...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGAGAGATCTCAGAGCGTaGCTCGGCGGTGGTGTAGTA +
Preference number: 2 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRRDLRA*LGGGVV
Trigger: TACTACACCACCGCCGAGCCACGCTCTGAGATCTCT...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCAGACTGGAGTCTGAGAACTaGGAGAGCAGGTCCCTGGTA +
Preference number: 2 (lower is better)
Translates to: AGDTSGHGPKKDKRTGSRLESEN*ESRSLV
Trigger: TACCAGGGACCTGCTCTCCCAGTTCTCAGACTCCAG...TCTGCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCGCGAGCATAGCCCTGTaGTTCTTGTCCCCAATGGCT +
Preference number: 2 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSASIAL*FLSPMA
Trigger: AGCCATTGGGGACAAGAACCACAGGGCTATGCTCGC...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCATTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCGTACACCCAGCAGAGTaGACACAGCACCGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: PLAGDTSGHGPKKDKRTGVHPAE*TQHRPE
Trigger: TTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTAC...GCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp CACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCTGCCTaGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: HSLTLVSCQLCVLPA*ADGTHDDAQKPRGC
Trigger: ACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGCAGCACAATGTTTGTaGGAACATCTTCTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHAAQCL*EHLLFE
Trigger: TTCAAAGAGAAGATGTTCTCACAAACATTGTGCTGC...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR GCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGCTCCTCAACTCAGGGTaGAAGATATCCGAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRLLNSG*KISEQS
Trigger: GCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAG...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACTCTTCAAGCAGTTCTaGAAAGAGGTGGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPLFKQF*KEVGAG
Trigger: CCCCGCCCCCACCTCTTTCCAGAACTGCTTGAAGAG...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACCAAGCAGAGGTGCTTaGAGGGCTACCCATGACCTC +
Preference number: 2 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPPSRGA*RATHDL
Trigger: GAGGTCATGGGTAGCCCTCCAAGCACCTCTGCTTGG...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGTTTTGGGCCTGTATCTaGAGTATGGGGGTGGGAGGC +
Preference number: 2 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVFWACI*SMGVGG
Trigger: GCCTCCCACCCCCATACTCCAGATACAGGCCCAAAA...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp AAGACAGGGTTTTCTGTGGCTTCCACAATCACTTGGTGGGCAGGGCCTCCGGCATCAGAGACCACACCGTaGGATACCAATAAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: KTGFSVASTITWWAGPPASETTP*DTNKGG
Trigger: TCCTCCCTTATTGGTATCCCACGGTGTGGTCTCTGA...TGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACTACTCTGTGCGGAGCTaGACGGTGGACTGCATAGTG +
Preference number: 2 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYYSVRS*TVDCIV
Trigger: CACTATGCAGTCCACCGTTCAGCTCCGCACAGAGTA...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp TTCTTGTCCCCAATGGCTGTCAGAAAGGCCAAAGCCACGTGGACGGTGAACTCCTGGCCTCGTCAGCTTTaGCTTGGGAATAAAAGGTCC +
Preference number: 2 (lower is better)
Translates to: FLSPMAVRKAKATWTVNSWPRQL*LGNKRS
Trigger: GGACCTTTTATTCCCAAGGCAAAGCTGACGAGGCCA...GGAGTTCACCGTCCACGTGGCTTTGGCCTTTCTGACAGCCATTGGGGACAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR-3UTR GCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCGTACAAACTTCCTTCTaGCACATGCACAAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPVQTSF*HMHKAQ
Trigger: CTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTAC...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCCTGACTTTAGTCTCCTaGCAGCTCTGTGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSLTLVS*QLCVLP
Trigger: AGGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAG...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCCACATTTGGGGAAGTTaGTTGTTCTCCTCCAGCATG +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGHIWGS*LFSSSM
Trigger: CATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTG...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGGGCTTGTCTCGGCTaGCAGTCTGCACCAGGAGTT +
Preference number: 2 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCWACLG*QSAPGV
Trigger: AACTCCTGGTGCAGACTGGCAGCCGAGACAAGCCCA...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGGTGAACAGTGAGTTCTaGGTTCCCACCATTGAGGGC +
Preference number: 2 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVVNSEF*VPTIEG
Trigger: GCCCTCAATGGTGGGAACGCAGAACTCACTGTTCAC...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCCTCTTCAAGCAGTTCTaGAAAGAGGTGGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCLFKQF*KEVGAG
Trigger: CCCCGCCCCCACCTCTTTCCAGAACTGCTTGAAGAG...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCGAGCAGAGCTGGTGTTaGGTAGGCAGACAGTGGCTT +
Preference number: 2 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSEQSWC*VGRQWL
Trigger: AAGCCACTGTCTGCCTACCCAACACCAGCTCTGCTC...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGCTCTGTGTAGGCCTGTaGCTCAACTTGAATCACCCT +
Preference number: 2 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRLCVGL*LNLNHP
Trigger: AGGGTGATTCAAGTTGAGCCACAGGCCTACACAGAG...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CTGGAAGACAAAAGGGATATGGGACATGTCAGCGAGGAAGGAGAGCATTCCACGACTGAGCGTACTCGATaGGCTCTGCTGCTGGGATTC +
Preference number: 2 (lower is better)
Translates to: LEDKRDMGHVSEEGEHSTTERTR*ALLLGF
Trigger: GAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGT...CGTGGAATGCTCTCCTTCCTCGCTGACATGTCCCATATCCCTTTTGTCTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCAGTACACCCAGCAGAGTaGACACAGCACCGTCCAGAA +
Preference number: 2 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPVHPAE*TQHRPE
Trigger: TTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTAC...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp GTACCGGGTGTTACTGTGAGGCTCTGTGTAGGCCTGTGGCTCAACTaGAATCACCCTGCTGACACAGGGGCTTGTGAAACAGCAGAAAAT +
Preference number: 2 (lower is better)
Translates to: VPGVTVRLCVGLWLN*NHPADTGACETAEN
Trigger: ATTTTCTGCTGTTTCACAAGCCCCTGTGTCAGCAGGGTGATTCAAGTTGAGCCACAGGCCTACACAGAGCCTCACAGTAACACCCGGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCACTAGTGCTGACTGCTaGCTATATAGAGGCCCTAAT +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGTSADC*LYRGPN
Trigger: ATTAGGGCCTCTATATAGTCAGCAGTCAGCACTAGT...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp TGCAAGCATCAGTACACCCAGCAGAGTGGACACAGCACCGTCCAGAACGGGAGCTATAATTGTTTGGCATaGTCCTCCCAGTTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: CKHQYTQQSGHSTVQNGSYNCLA*SSQFPS
Trigger: ACTGGGAAACTGGGAGGATCATGCCAAACAATTATA...GCTCCCGTTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CTGGAAGACAAAAGGGATATGGGACATGTCAGCGAGGAAGGAGAGCATTCCACGAGGGAGAGTGAACAGTaGGTTCTGCGTTCCCACCAT +
Preference number: 2 (lower is better)
Translates to: LEDKRDMGHVSEEGEHSTRESEQ*VLRSHH
Trigger: ATGGTGGGAACGCAGAACTCACTGTTCACTCTCCCT...CGTGGAATGCTCTCCTTCCTCGCTGACATGTCCCATATCCCTTTTGTCTTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTCCAAGCAGAGGTGCTTaGAGGGCTACCCATGACCTC +
Preference number: 2 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAPSRGA*RATHDL
Trigger: GAGGTCATGGGTAGCCCTCCAAGCACCTCTGCTTGG...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATTCGTGGGCGAAGCTGTaGCTGGTGTATGGGGGTGGG +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHSWAKL*LVYGGG
Trigger: CCCACCCCCATACACCAGCCACAGCTTCGCCCACGA...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATGGTGAGGCCGGATGTTaGCCTGGGAGGCAGCGTAAG +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHGEAGC*PGRQRK
Trigger: CTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACC...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp AGAGCTCAGCTCAACAAACCTGCTGGGCTGAGAAGTCAACCACAAAACACTAGTGATGGGCTCTGCTGCTaGGATTCTCAGCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: RAQLNKPAGLRSQPQNTSDGLCC*DSQPGL
Trigger: GAGACCAGGCTGAGAATCCCAGCAGCAGAGCCCATC...ACTAGTGTTTTGTGGTTGACTTCTCAGCCCAGCAGGTTTGTTGAGCTGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGAGAACATCTTCTCTTTaGAACCCAAGCAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRRTSSL*NPSRGA
Trigger: AGCACCTCTGCTTGGGTTTCAAAGAGAAGATGTTCT...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGACTAGTGCTGACTGCTaGCTATATAGAGGCCCTAAT +
Preference number: 2 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRTSADC*LYRGPN
Trigger: ATTAGGGCCTCTATATAGTCAGCAGTCAGCACTAGT...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCGGCTGTGTGTATGTGTaGTCATCAGAAAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSGCVYV*SSERNN
Trigger: GTTGTTCCTTTCTGATGATCACACATACACACAGCC...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTGTGGAGGCTGGAGTCTaGGAACTGGGAGAGCAGGTC +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAVEAGV*ELGEQV
Trigger: GACCTGCTCTCCCAGTTCTCAGACTCCAGCCTCCAC...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATTGGTCCCATAAAGGCTaGCCCCCAGCAAGCCCAGGA +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHWSHKG*PPASPG
Trigger: TCCTGGGCTTGCTGGGGGTCAGCCTTTATGGGACCA...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCGAACTCTGCTGTAAGTaGCCAGCAAACAGGTACAAG +
Preference number: 2 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDIELCCK*PANRYK
Trigger: CTTGTACCTGTTTGCTGGGCACTTACAGCAGAGTTC...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR GCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGAGCATAGTGCTTCTCTaGAAACGAAGAGAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRSIVLL*KRRECP
Trigger: TGGACACTCTCTTCGTTTGCAGAGAAGCACTATGCT...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGCACATTTGGGGAAGTTaGTTGTTCTCCTCCAGCATG +
Preference number: 2 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVHIWGS*LFSSSM
Trigger: CATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTG...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAACTCTTCAAGCAGTTCTaGAAAGAGGTGGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQLFKQF*KEVGAG
Trigger: CCCCGCCCCCACCTCTTTCCAGAACTGCTTGAAGAG...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCTATGCTTTTACGAGGTaGCATCTTCCTGCTTTCACA +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGYAFTR*HLPAFT
Trigger: TGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATA...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp AAGACAGGGTTTTCTGTGGCTTCCACAATCACTTGGTGGGCAGGGCCTCCGGCATACTTTCCAATCACATaGATCACTGCTCACGTGTAC +
Preference number: 2 (lower is better)
Translates to: KTGFSVASTITWWAGPPAYFPIT*ITAHVY
Trigger: GTACACGTGAGCAGTGATCCATGTGATTGGAAAGTA...TGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACTCTCAGCCTGGTCTCTaGCATGTAGTCGGCTTTGTC +
Preference number: 2 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHSQPGL*HVVGFV
Trigger: GACAAAGCCGACTACATGCCAGAGACCAGGCTGAGA...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GAGAATAGGACAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAACATGGCGGTGGACGTTaGGTTCCGAGGGTTGTGAGA +
Preference number: 2 (lower is better)
Translates to: ENRTDDWGHLSTSITTEKHGGGR*VPRVVR
Trigger: TCTCACAACCCTCGGAACCCAACGTCCACCGCCATG...TTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTGTCCTATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp AAGACAGGGTTTTCTGTGGCTTCCACAATCACTTGGTGGGCAGGGCCTCCGGCAGAGGACCCCGTCATCTaGTCCATTTTTATAATTGTT +
Preference number: 2 (lower is better)
Translates to: KTGFSVASTITWWAGPPAEDPVI*SIFIIV
Trigger: AACAATTATAAAAATGGATCAGATGACGGGGTCCTC...TGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCGAGGTGGCATCTTCCTaGTTTCACAGACATCACACT +
Preference number: 2 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSEVASS*FHRHHT
Trigger: AGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTC...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCAGCATAGTGCTTCTCTaGAAACGAAGAGAGTGTCCA +
Preference number: 2 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDISIVLL*KRRECP
Trigger: TGGACACTCTCTTCGTTTGCAGAGAAGCACTATGCT...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp CGACATGCCAGAAGCTTGGCAATGCCTCAAGGCTGGTCAATGAACTCACACCCTCCAGTCACTGTCAAATaGATCCTGAAGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: RHARSLAMPQGWSMNSHPPVTVK*ILKSLK
Trigger: CTTCAAGGACTTCAGGATGCATTTGACAGTGACTGG...AGGGTGTGAGTTCATTGACCAGCCTTGAGGCATTGCCAAGCTTCTGGCATGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCAGCAAAACTAAACAATaGTACCAAGGACAGCCTGAT +
Preference number: 2 (lower is better)
Translates to: VLPALADGTHDDAQKPRGSKTKQ*YQGQPD
Trigger: ATCAGGCTGTCCTTGGTAGCATTGTTTAGTTTTGCT...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp AGAGCTCAGCTCAACAAACCTGCTGGGCTGAGAAGTCAACCACAAAACACTAGTGTGTCCTTCCTGCCTTaGCTGATGGGACTCATGATG +
Preference number: 2 (lower is better)
Translates to: RAQLNKPAGLRSQPQNTSVSFLP*LMGLMM
Trigger: CATCATGAGTCCCATCAGCCAAGGCAGGAAGGACAC...ACTAGTGTTTTGTGGTTGACTTCTCAGCCCAGCAGGTTTGTTGAGCTGAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGGATGGGCTCTGCTGCTaGGATTCTCAGCCTGGTCTC +
Preference number: 2 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLDGLCC*DSQPGL
Trigger: GAGACCAGGCTGAGAATCCCAGCAGCAGAGCCCATC...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCCGGCAAAGAAGTATCTaGAAGACAAAAGGGATATGG +
Preference number: 2 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSRQRSI*KTKGIW
Trigger: CCATATCCCTTTTGTCTTCCAGATACTTCTTTGCCG...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCGGCTGTGTGTATGTGTaGTCATCAGAAAGGAACAAC +
Preference number: 2 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSGCVYV*SSERNN
Trigger: GTTGTTCCTTTCTGATGATCACACATACACACAGCC...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACACACACATCCACCCATaGGAACCATATACAACTACC +
Preference number: 2 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYTHIHP*EPYTTT
Trigger: GGTAGTTGTATATGGTTCGCATGGGTGGATGTGTGT...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACGGGATTCAGGGAAGCTaGATGCAGACAGAGTACATT +
Preference number: 2 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHGIQGS*MQTEYI
Trigger: AATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCC...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGGCTCTTTACTCCCAGTaGGCAGCTGAGAGCCCTGAA +
Preference number: 2 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLALYSQ*AAESPE
Trigger: TTCAGGGCTCTCAGCTGCCCACTGGGAGTAAAGAGC...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CCA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAACATTTCCACCCAAATTaGCAGACGAGACCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: GIFLLSQTSHWMDANSGEHFHPN*QTRPSL
Trigger: CAAACTGGGTCTCGTCTGCCAATTTGGGTGGAAATG...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTACTGAGCGTACTCGATaGGCTCTGCTGCTGGGATTC +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLATERTR*ALLLGF
Trigger: GAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGT...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATGATAGCAGCAGCCAGTaGCGCAGGCTGATGTATTGC +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHDSSSQ*RRLMYC
Trigger: GCAATACATCAGCCTGCGCCACTGGCTGCTGCTATC...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 2 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDISLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCGAGGACCCCGTCATCTaGTCCATTTTTATAATTGTT +
Preference number: 2 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDIEDPVI*SIFIIV
Trigger: AACAATTATAAAAATGGATCAGATGACGGGGTCCTC...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATCTCCTCAACTCAGGGTaGAAGATATCCGAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHLLNSG*KISEQS
Trigger: GCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAG...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATCTTCCTTCTGCCACATaGACAAGGCTCAGGCATGAG +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHLPSAT*TRLRHE
Trigger: CTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAG...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCCCAGTCACTGTCAAATaGATCCTGAAGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCPVTVK*ILKSLK
Trigger: CTTCAAGGACTTCAGGATGCATTTGACAGTGACTGG...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCAATTAATGATGCCATCTaGGTCTACCAGACGCTGTTT +
Preference number: 2 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPINDAI*VYQTLF
Trigger: AAACAGCGTCTGGTAGACGCAGATGGCATCATTAAT...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TGCTTTCTGGGTGACTATATACATGTTGTAGAAAGAGAAGTACTTGAACTGGGCCTCTTCAAGCAGTTCTaGAAAGAGGTGGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: CFLGDYIHVVEREVLELGLFKQF*KEVGAG
Trigger: CCCCGCCCCCACCTCTTTCCAGAACTGCTTGAAGAG...GCCCAGTTCAAGTACTTCTCTTTCTACAACATGTATATAGTCACCCAGAAAGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTCGACAGAAAAAGACCTaGACCTTCCCAGCCCACCTA +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLARQKKT*TFPAHL
Trigger: TAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGTCG...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATGTGTCCTTCCTGCCTTaGCTGATGGGACTCATGATG +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHVSFLP*LMGLMM
Trigger: CATCATGAGTCCCATCAGCCAAGGCAGGAAGGACAC...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGGGATTACCACAACCTTaGCTTTGGGTTTCAGGAGGA +
Preference number: 2 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHEGLPQP*LWVSGG
Trigger: TCCTCCTGAAACCCAAAGCCAAGGTTGTGGTAATCC...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp AGGGCACTCCACAATGGCAGGGCTGCTCTGCAGGCCAATCTTTTGTaGAACAATTTAGCATCTTTGAATACTCTTGTTTTGCGTCAGCCA +
Preference number: 2 (lower is better)
Translates to: RALHNGRAALQANLL*NNLASLNTLVLRQP
Trigger: TGGCTGACGCAAAACAAGAGTATTCAAAGATGCTAAATTGTTCAACAAAAGATTGGCCTGCAGAGCAGCCCTGCCATTGTGGAGTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CTGGAAGACAAAAGGGATATGGGACATGTCAGCGAGGAAGGAGAGCATTCCACGGCAGCACAATGTTTGTaGGAACATCTTCTCTTTGAA +
Preference number: 2 (lower is better)
Translates to: LEDKRDMGHVSEEGEHSTAAQCL*EHLLFE
Trigger: TTCAAAGAGAAGATGTTCTCACAAACATTGTGCTGC...CGTGGAATGCTCTCCTTCCTCGCTGACATGTCCCATATCCCTTTTGTCTTCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCAAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 2 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPSLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGACACACATCCACCCATaGGAACCATATACAACTACC +
Preference number: 2 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHETHIHP*EPYTTT
Trigger: GGTAGTTGTATATGGTTCGCATGGGTGGATGTGTGT...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 2 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GAGGGATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 2 (lower is better)
Translates to: EGFREAACRQSTFLTTASDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...GGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCCACAATACAGTACATTaGAAAGTCACATGCACACAC +
Preference number: 2 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSHNTVH*KVTCTH
Trigger: GTGTGTGCATGTGACTTTCCAATGTACTGTATTGTG...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTACACCTGGGAGCTGTCTaGAAAGGCCTCCATCAATAT +
Preference number: 2 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLHLGAV*KGLHQY
Trigger: ATATTGATGGAGGCCTTTCCAGACAGCTCCCAGGTG...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CAA 90 bp TCCTTGAAGCCAGTCTCTAAAGTAGTGCAGCCACATTTGGGGAAGTaGCTTGTTCTCCTCCAGCATGACATACTTCACATTGCTGAAACT +
Preference number: 2 (lower is better)
Translates to: SLKPVSKVVQPHLGK*LVLLQHDILHIAET
Trigger: AGTTTCAGCAATGTGAAGTATGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTGGCTGCACTACTTTAGAGACTGGCTTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 90 bp ATCCTGAAGTCCTTGAAGCCAGTCTCTAAAGTAGTGCAGCCACATTaGGGGAAGTTGCTTGTTCTCCTCCAGCATGACATACTTCACATT +
Preference number: 2 (lower is better)
Translates to: ILKSLKPVSKVVQPH*GKLLVLLQHDILHI
Trigger: AATGTGAAGTATGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTGGCTGCACTACTTTAGAGACTGGCTTCAAGGACTTCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAAATCTGGCTTCTCTTaGATAGTCCCAGAGAATAGG +
Preference number: 2 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAKSGFS*IVPENR
Trigger: CCTATTCTCTGGGACTATTCAAGAGAAGCCAGATTT...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTTATAATTGTTTGGCATaGTCCTCCCAGTTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAYNCLA*SSQFPS
Trigger: ACTGGGAAACTGGGAGGATCATGCCAAACAATTATA...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp AGAGCTCAGCTCAACAAACCTGCTGGGCTGAGAAGTCAACCACAAAACACTAGTTTCAAACATAAAGGCTaGAGCACCATGGTAGAAGAG +
Preference number: 2 (lower is better)
Translates to: RAQLNKPAGLRSQPQNTSFKHKG*STMVEE
Trigger: CTCTTCTACCATGGTGCTTCAGCCTTTATGTTTGAA...ACTAGTGTTTTGTGGTTGACTTCTCAGCCCAGCAGGTTTGTTGAGCTGAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAACATTGGAAAGTCACATaGACACACACATCCACCCAT +
Preference number: 2 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQHWKVT*THTSTH
Trigger: ATGGGTGGATGTGTGTGTGCATGTGACTTTCCAATG...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACGAGGTGGCATCTTCCTaGTTTCACAGACATCACACT +
Preference number: 2 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDEVASS*FHRHHT
Trigger: AGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTC...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATTTCAGGGAAGCTGCATaGAGACAGAGTACATTCCTC +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHFREAA*RQSTFL
Trigger: GAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAA...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACTTCAGGGAAGCTGCATaGAGACAGAGTACATTCCTC +
Preference number: 2 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDFREAA*RQSTFL
Trigger: GAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAA...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GAAGCCTCAGAAGGGACCCAAACACAAAATCTGGGTACACTGTATCATTTCCTATTCAGGGAAGCTGCATaGAGACAGAGTACATTCCTC +
Preference number: 2 (lower is better)
Translates to: EASEGTQTQNLGTLYHFLFREAA*RQSTFL
Trigger: GAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAA...TAGGAAATGATACAGTGTACCCAGATTTTGTGTTTGGGTCCCTTCTGAGGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACGGGATTCAGGGAAGCTaGATGCAGACAGAGTACATT +
Preference number: 2 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDGIQGS*MQTEYI
Trigger: AATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCC...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCCTCCTCAACTCAGGGTaGAAGATATCCGAGCAGAGC +
Preference number: 2 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSLLNSG*KISEQS
Trigger: GCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAG...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACACTGTGAAATGCCCCTaGCTCTTACAGCAGAATCTC +
Preference number: 2 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDTVKCP*LLQQNL
Trigger: GAGATTCTGCTGTAAGAGGCAGGGGCATTTCACAGT...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAGGCATGAAGCAAATCTaGCTTCTCTTGAATAGTCCC +
Preference number: 2 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQGMKQI*LLLNSP
Trigger: GGGACTATTCAAGAGAAGCCAGATTTGCTTCATGCC...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTAGACATCACACTGGATaGATGCTAACAGTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLARHHTG*MLTVGK
Trigger: CTTCCCCACTGTTAGCATCCATCCAGTGTGATGTCT...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATAGACATCACACTGGATaGATGCTAACAGTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHRHHTG*MLTVGK
Trigger: CTTCCCCACTGTTAGCATCCATCCAGTGTGATGTCT...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACCATTTCCACCCAAATTaGCAGACGAGACCCAGTTTG +
Preference number: 2 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDHFHPN*QTRPSL
Trigger: CAAACTGGGTCTCGTCTGCCAATTTGGGTGGAAATG...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CTGGAAGACAAAAGGGATATGGGACATGTCAGCGAGGAAGGAGAGCATTCCACGCTATTCAGTCTCATTTaGCATTGGGCATTGATATCA +
Preference number: 2 (lower is better)
Translates to: LEDKRDMGHVSEEGEHSTLFSLI*HWALIS
Trigger: TGATATCAATGCCCAATGCCAAATGAGACTGAATAG...CGTGGAATGCTCTCCTTCCTCGCTGACATGTCCCATATCCCTTTTGTCTTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTAGAACATCTTCTCTTTaGAACCCAAGCAGAGGTGCT +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLARTSSL*NPSRGA
Trigger: AGCACCTCTGCTTGGGTTTCAAAGAGAAGATGTTCT...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAAGACAAAATAAAACTATaGGAGAGACAGACAGAGACA +
Preference number: 2 (lower is better)
Translates to: GIFLLSQTSHWMDANSGEDKIKL*ERQTET
Trigger: TGTCTCTGTCTGTCTCTCTCATAGTTTTATTTTGTC...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATCATTGGAAAGTCACATaGACACACACATCCACCCAT +
Preference number: 2 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHHWKVT*THTSTH
Trigger: ATGGGTGGATGTGTGTGTGCATGTGACTTTCCAATG...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCCTGACTTTAGTCTCCTaGCAGCTCTGTGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSLTLVS*QLCVLP
Trigger: AGGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAG...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CCCCTCTCGAGAACCCAGCAGAAGCAAACAAATGAAGTACAGGGCGTAGAATTTCCCAAACACAAAATCTaGGTACACTGTATCATTTCC +
Preference number: 2 (lower is better)
Translates to: PLSRTQQKQTNEVQGVEFPKHKI*VHCIIS
Trigger: GGAAATGATACAGTGTACCCAGATTTTGTGTTTGGG...AAATTCTACGCCCTGTACTTCATTTGTTTGCTTCTGCTGGGTTCTCGAGAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTAAAATCTGGCTTCTCTTaGATAGTCCCAGAGAATAGG +
Preference number: 2 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLKSGFS*IVPENR
Trigger: CCTATTCTCTGGGACTATTCAAGAGAAGCCAGATTT...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCGTACAAACTTCCTTCTaGCACATGCACAAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSVQTSF*HMHKAQ
Trigger: CTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTAC...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR GCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTCACTGTCCTTTACTTTaGAAAGTCAGCATCTTACCC +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAHCPLL*KVSILP
Trigger: GGGTAAGATGCTGACTTTGCAAAGTAAAGGACAGTG...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GAGAATAGGACAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAACACAATACAGTACATTaGAAAGTCACATGCACACAC +
Preference number: 2 (lower is better)
Translates to: ENRTDDWGHLSTSITTEKHNTVH*KVTCTH
Trigger: GTGTGTGCATGTGACTTTCCAATGTACTGTATTGTG...TTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTGTCCTATTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTCAGGAAAAGACCGTGTaGAAAAGAGTCCTTAGAAAC +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAQEKTV*KRVLRN
Trigger: GTTTCTAAGGACTCTTTTCCACACGGTCTTTTCCTG...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTGTAAAGTCATCTGCATaGTTGTTAGAACTCTGCTGT +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAVKSSA*LLELCC
Trigger: ACAGCAGAGTTCTAACAACCATGCAGATGACTTTAC...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCACAATACAGTACATTaGAAAGTCACATGCACACAC +
Preference number: 2 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLHNTVH*KVTCTH
Trigger: GTGTGTGCATGTGACTTTCCAATGTACTGTATTGTG...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCGGCATGAAGCAAATCTaGCTTCTCTTGAATAGTCCC +
Preference number: 2 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSGMKQI*LLLNSP
Trigger: GGGACTATTCAAGAGAAGCCAGATTTGCTTCATGCC...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTTGCTTCTTTCTCGGGTaGTTAAGAGTTTCCAAAATG +
Preference number: 2 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLACFFLG*LRVSKM
Trigger: CATTTTGGAAACTCTTAACCACCCGAGAAAGAAGCA...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR TCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGTGTTATAAACTGGCATaGCAAATTCTGGAGGACATT +
Preference number: 2 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLCYKLA*QILEDI
Trigger: AATGTCCTCCAGAATTTGTCATGCCAGTTTATAACA...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTTCTTGTTATAAACTaGCATGACAAATTCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLLLVIN*HDKFWR
Trigger: CCTCCAGAATTTGTCATGCCAGTTTATAACAAGAAG...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp CTGCCCATGGCGGTGGACGTTGGGTTCCGAGGGTTGTaGGAACGGGCCCCACGGGGCCCTGAGCGGTCCCTA +
Preference number: 3 (lower is better)
Translates to: LPMAVDVGFRGL*ERAPRGPERSL
Trigger: TAGGGACCGCTCAGGGCCCCGTGGGGCCCGTTCTCACAACCCTCGGAACCCAACGTCCACCGCCATGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp GTAGCTGGGCACAGAGCTGCCCATGGCGGTGGACGTTaGGTTCCGAGGGTTGTGAGAACGGGCCCCACGGGG +
Preference number: 3 (lower is better)
Translates to: VAGHRAAHGGGR*VPRVVRTGPTG
Trigger: CCCCGTGGGGCCCGTTCTCACAACCCTCGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp GGCCGCAAGCCTTCTCTAGGGGGATCCCTTCGAGGCTaGTGGCCTTGCCGTCCAGGGGACAAGGAGCCAGAG +
Preference number: 3 (lower is better)
Translates to: GRKPSLGGSLRG*WPCRPGDKEPE
Trigger: CTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGATCCCCCTAGAGAAGGCTTGCGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp GCTGGCAGTAGCTGGGCACAGAGCTGCCCATGGCGGTaGACGTTGGGTTCCGAGGGTTGTGAGAACGGGCCC +
Preference number: 3 (lower is better)
Translates to: AGSSWAQSCPWR*TLGSEGCENGP
Trigger: GGGCCCGTTCTCACAACCCTCGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCTACTGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp GTTCCGAGGGTTGTGAGAACGGGCCCCACGGGGCCCTaGGCGGTCCCTATTGCTAGGGCCAGAATGCCCTTC +
Preference number: 3 (lower is better)
Translates to: VPRVVRTGPTGP*AVPIARARMPF
Trigger: GAAGGGCATTCTGGCCCTAGCAATAGGGACCGCTCAGGGCCCCGTGGGGCCCGTTCTCACAACCCTCGGAAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp CCTTCTCTAGGGGGATCCCTTCGAGGCTGCTGGCCTTaGCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTGG +
Preference number: 3 (lower is better)
Translates to: PSLGGSLRGCWP*RPGDKEPESRW
Trigger: CCACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGATCCCCCTAGAGAAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp TGTCATGGACCCACTCCGGCCGGTGAGGCCGGATGTTaGCCTGGGAGGCAGCGTAAGCTACAGGGTCGTTGC +
Preference number: 3 (lower is better)
Translates to: CHGPTPAGEAGC*PGRQRKLQGRC
Trigger: GCAACGACCCTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGGTCCATGACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp CGCAAGCCTTCTCTAGGGGGATCCCTTCGAGGCTGCTaGCCTTGCCGTCCAGGGGACAAGGAGCCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: RKPSLGGSLRGC*PCRPGDKEPES
Trigger: GGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGATCCCCCTAGAGAAGGCTTGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp TGGGCAGGGCCTCCGGCACCCTGCTGTGCTTCGTATTaGCTGAGCTCCTCACTGATGCCAGACACCGTGGTC +
Preference number: 3 (lower is better)
Translates to: WAGPPAPCCASY*LSSSLMPDTVV
Trigger: GACCACGGTGTCTGGCATCAGTGAGGAGCTCAGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp AGCCAGGGCCCGCCTCTGGTCAGCACTCTGCACAGCTaGAGGGCGCACACTCCACGCAAGGATGCTTTTCTG +
Preference number: 3 (lower is better)
Translates to: SQGPPLVSTLHS*RAHTPRKDAFL
Trigger: CAGAAAAGCATCCTTGCGTGGAGTGTGCGCCCTCCAGCTGTGCAGAGTGCTGACCAGAGGCGGGCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp GGGGCTGTTGCCGAGGGGTCAAGGGAGGCTGATGTCTaGAGTCCGGATGGACCACAGTGGACCGGGCAAAGA +
Preference number: 3 (lower is better)
Translates to: GAVAEGSREADV*SPDGPQWTGQR
Trigger: TCTTTGCCCGGTCCACTGTGGTCCATCCGGACTCCAGACATCAGCCTCCCTTGACCCCTCGGCAACAGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp CTCAGATGGCCCTTGGAAGCACCACGGGGATACCTCTaGCACACACCTCAGTTGGAGCTGCTCCCCCACGGC +
Preference number: 3 (lower is better)
Translates to: LRWPLEAPRGYL*HTPQLELLPHG
Trigger: GCCGTGGGGGAGCAGCTCCAACTGAGGTGTGTGCCAGAGGTATCCCCGTGGTGCTTCCAAGGGCCATCTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR-3UTR CAA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGGCACAGCACTCAGCTaGATCCCAATGAGGCCCATC +
Preference number: 3 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHGTALS*IPMRPI
Trigger: GATGGGCCTCATTGGGATCAAGCTGAGTGCTGTGCC...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR GCA 72 bp GAAAACGCTGCCCATTCTGTGAGAGCCGGGGCATTGTaGAGGGCGAGGGCACTCCACAATGGCAGGGCTGCT +
Preference number: 3 (lower is better)
Translates to: ENAAHSVRAGAL*RARALHNGRAA
Trigger: AGCAGCCCTGCCATTGTGGAGTGCCCTCGCCCTGCACAATGCCCCGGCTCTCACAGAATGGGCAGCGTTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp ACCGGACGACACTTGGAGGCGGCTCAGGCGAAGGAGTaGGCAGTCGGTTTAGGCCATTGGCTGGAGACACCT +
Preference number: 3 (lower is better)
Translates to: TGRHLEAAQAKE*AVGLGHWLETP
Trigger: AGGTGTCTCCAGCCAATGGCCTAAACCGACTGCCCACTCCTTCGCCTGAGCCGCCTCCAAGTGTCGTCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp AGCAGGTCCCTGGTAGAGCTGGTGCTCTCGGGACTCTaGCAGCTGAGGTTGTCCTGGGTGACGGTAACAGGC +
Preference number: 3 (lower is better)
Translates to: SRSLVELVLSGL*QLRLSWVTVTG
Trigger: GCCTGTTACCGTCACCCAGGACAACCTCAGCTGTCAGAGTCCCGAGAGCACCAGCTCTACCAGGGACCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CCCACTCCGGCCGGTGAGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGATTTGGGGAAGTTGCTaGTTCTCCTCCAGCATGACA +
Preference number: 3 (lower is better)
Translates to: PTPAGEAGCWPGRQRKLQIWGSC*FSSSMT
Trigger: TGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAAT...CTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp TGGCCTGGGAGGCAGCGTAAGCTACAGGGTCGTTGCTaGCCCAAGCGGTCAGGTAGATGTAGAAAGCGCTCG +
Preference number: 3 (lower is better)
Translates to: WPGRQRKLQGRC*PKRSGRCRKRS
Trigger: CGAGCGCTTTCTACATCTACCTGACCGCTTGGGTCAGCAACGACCCTGTAGCTTACGCTGCCTCCCAGGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp GAGCATTCCACGCCCCCGGGCGCCCAAAGGTTACTCTaGACTAAGAGCTCAGCTCAACAAACCTGCTGGGCT +
Preference number: 3 (lower is better)
Translates to: EHSTPPGAQRLL*TKSSAQQTCWA
Trigger: AGCCCAGCAGGTTTGTTGAGCTGAGCTCTTAGTGCAGAGTAACCTTTGGGCGCCCGGGGGCGTGGAATGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 72 bp AATCACTTGGTGGGCAGGGCCTCCGGCACCCTGCTGTaGTTCGTATTGCCTGAGCTCCTCACTGATGCCAGA +
Preference number: 3 (lower is better)
Translates to: NHLVGRASGTLL*FVLPELLTDAR
Trigger: TCTGGCATCAGTGAGGAGCTCAGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp TCCACAATCACTTGGTGGGCAGGGCCTCCGGCACCCTaGTGTGCTTCGTATTGCCTGAGCTCCTCACTGATG +
Preference number: 3 (lower is better)
Translates to: STITWWAGPPAP*CASYCLSSSLM
Trigger: CATCAGTGAGGAGCTCAGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp GGTGACGGTAACAGGCTGTACAGAGATCTCAGAGCGTaGCTCGGCGGTGGTGTAGTACACGTGCGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: GDGNRLYRDLRA*LGGGVVHVRVR
Trigger: CCTCACACGCACGTGTACTACACCACCGCCGAGCCACGCTCTGAGATCTCTGTACAGCCTGTTACCGTCACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp AGCCGGGGCATTGTGCAGGGCGAGGGCACTCCACAATaGCAGGGCTGCTCTGCAGGCCAATCTTTTGTTGAA +
Preference number: 3 (lower is better)
Translates to: SRGIVQGEGTPQ*QGCSAGQSFVE
Trigger: TTCAACAAAAGATTGGCCTGCAGAGCAGCCCTGCCATTGTGGAGTGCCCTCGCCCTGCACAATGCCCCGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp GCTCAGGCGAAGGAGTGGGCAGTCGGTTTAGGCCATTaGCTGGAGACACCTCAGGACACGGTCCAAAGAAGG +
Preference number: 3 (lower is better)
Translates to: AQAKEWAVGLGH*LETPQDTVQRR
Trigger: CCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGGCCTAAACCGACTGCCCACTCCTTCGCCTGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp GCAAAGACAGGGTTTTCTGTGGCTTCCACAATCACTTaGTGGGCAGGGCCTCCGGCACCCTGCTGTGCTTCG +
Preference number: 3 (lower is better)
Translates to: AKTGFSVASTIT*WAGPPAPCCAS
Trigger: CGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CCGGTGAGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGGGTCGTTGCTACCACAACCTTGGCTTaGGGTTTCAGGAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: PVRPDVGLGGSVSYRVVATTTLA*GFRRKG
Trigger: TCCTTTCCTCCTGAAACCCAAAGCCAAGGTTGTGGT...AGCAACGACCCTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp CCAGCCCGTCTCTCACTCGGGTGGTCCCATAAAGGCTaGCCCCCAGCAAGCCCAGGAAAAGAAGGATTACCA +
Preference number: 3 (lower is better)
Translates to: PARLSLGWSHKG*PPASPGKEGLP
Trigger: TGGTAATCCTTCTTTTCCTGGGCTTGCTGGGGGTCAGCCTTTATGGGACCACCCGAGTGAGAGACGGGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp GCTGAATGGCTGAGCACCCTGAAAGTACAGATACAATaGTGGGCGAGGGGCCCCTCTCGAGAACCCAGCAGA +
Preference number: 3 (lower is better)
Translates to: AEWLSTLKVQIQ*WARGPSREPSR
Trigger: TCTGCTGGGTTCTCGAGAGGGGCCCCTCGCCCAGCATTGTATCTGTACTTTCAGGGTGCTCAGCCATTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp GGCATTAAGACAGTAGCAGTGGATGGCCAGGGCTTCTaGCGCGCACGCGCACACGGATATACAGACAGACAC +
Preference number: 3 (lower is better)
Translates to: GIKTVAVDGQGF*RARAHGYTDRH
Trigger: GTGTCTGTCTGTATATCCGTGTGCGCGTGCGCGCCAGAAGCCCTGGCCATCCACTGCTACTGTCTTAATGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp CAGGCTGTACAGAGATCTCAGAGCGTGGCTCGGCGGTaGTGTAGTACACGTGCGTGTGAGGGTCATACTCTG +
Preference number: 3 (lower is better)
Translates to: QAVQRSQSVARR*CSTRACEGHTL
Trigger: CAGAGTATGACCCTCACACGCACGTGTACTACACCACCGCCGAGCCACGCTCTGAGATCTCTGTACAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACTGCATCCTGAAGTCCTaGAAGCCAGTCTCTAAAGTA +
Preference number: 3 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHCILKS*KPVSKV
Trigger: TACTTTAGAGACTGGCTTCAAGGACTTCAGGATGCA...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR-3UTR CAA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCGCGCAGGCTGATGTATaGCTCCCAGAACAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSAQADV*LPEQEG
Trigger: CCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCGC...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp AGTCATATTCTCTGGTTTCCCGGGGAACAATGTCCGTaGGGTCCAGCCCGTCTCTCACTCGGGTGGTCCCAT +
Preference number: 3 (lower is better)
Translates to: SHILWFPGEQCP*GPARLSLGWSH
Trigger: ATGGGACCACCCGAGTGAGAGACGGGCTGGACCTCACGGACATTGTTCCCCGGGAAACCAGAGAATATGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp TACTCCGAGTCGGAGGAATCAGACCCATTGTTCGTGTaGCCAGGAGGCACGGCAAACCGGACGACACTTGGA +
Preference number: 3 (lower is better)
Translates to: YSESEESDPLFV*PGGTANRTTLG
Trigger: TCCAAGTGTCGTCCGGTTTGCCGTGCCTCCTGGTCACACGAACAATGGGTCTGATTCCTCCGACTCGGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp GCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTaGAAGATATCCGAGCAGAGCTGGTGTTGGGTAGGC +
Preference number: 3 (lower is better)
Translates to: ASALYISLLNSG*KISEQSWCWVG
Trigger: GCCTACCCAACACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp GTAAACCCGTGCTCCAGCTCCTCAGCTGACTTGACCTaGAAGGTCTCCGCACACCCAACTTTCTCTCGGCTT +
Preference number: 3 (lower is better)
Translates to: VNPCSSSSADLT*KVSAHPTFSRL
Trigger: AAGCCGAGAGAAAGTTGGGTGTGCGGAGACCTTGCAGGTCAAGTCAGCTGAGGAGCTGGAGCACGGGTTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 72 bp CGGGGCCCTGAGCGGTCCCTATTGCTAGGGCCAGAATaGCCTTCAGTAGAAATTTCAAAAGCGTCTCTGCGC +
Preference number: 3 (lower is better)
Translates to: RGPERSLLLGPE*PSVEISKASLR
Trigger: GCGCAGAGACGCTTTTGAAATTTCTACTGAAGGGCATTCTGGCCCTAGCAATAGGGACCGCTCAGGGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp GTACCGGGTGTTACTGTGAGGCTCTGTGTAGGCCTGTaGCTCAACTTGAATCACCCTGCTGACACAGGGGCT +
Preference number: 3 (lower is better)
Translates to: VPGVTVRLCVGL*LNLNHPADTGA
Trigger: AGCCCCTGTGTCAGCAGGGTGATTCAAGTTGAGCCACAGGCCTACACAGAGCCTCACAGTAACACCCGGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp AAGACAGGGTTTTCTGTGGCTTCCACAATCACTTGGTaGGCAGGGCCTCCGGCACCCTGCTGTGCTTCGTAT +
Preference number: 3 (lower is better)
Translates to: KTGFSVASTITW*AGPPAPCCASY
Trigger: ATACGAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GAGGCTGCTGGCCTTGCCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTGGGGCTCAATCTTTGGCCTCTTaGCTTCAGATTTTAATTACC +
Preference number: 3 (lower is better)
Translates to: EAAGLAVQGTRSQSPGGAQSLAS*LQILIT
Trigger: GGTAATTAAAATCTGAAGCAAAGAGGCCAAAGATTG...AGCCCCACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp TGGGCACAGAGCTGCCCATGGCGGTGGACGTTGGGTTCCGAGGGTTGTGAGAACCACCATCAGGCAACATaGTCCAATCTTTCACCACTA +
Preference number: 3 (lower is better)
Translates to: WAQSCPWRWTLGSEGCENHHQAT*SNLSPL
Trigger: TAGTGGTGAAAGATTGGACAATGTTGCCTGATGGTG...GTTCTCACAACCCTCGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp GAGGTAGAAAGGGAACTGAGCGTACTCGATGGGCTCTaGTGCTGGGATTCTCAGCCTGGTCTCTGGCATGTA +
Preference number: 3 (lower is better)
Translates to: EVERELSVLDGL*CWDSQPGLWHV
Trigger: TACATGCCAGAGACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGTTCCCTTTCTACCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp TTGTCCCCAATGGCTGTCAGAAAGGCCAAAGCCACGTaGACGGTGAACTCCACTCCGATGCCAACAGATGCA +
Preference number: 3 (lower is better)
Translates to: LSPMAVRKAKAT*TVNSTPMPTDA
Trigger: TGCATCTGTTGGCATCGGAGTGGAGTTCACCGTCCACGTGGCTTTGGCCTTTCTGACAGCCATTGGGGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CCATTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCCTCGTCAGCTTTGCCTaGGGAATAAAAGGTCCCCCA +
Preference number: 3 (lower is better)
Translates to: PLAGDTSGHGPKKDKRTGLVSFA*GIKGPP
Trigger: TGGGGGACCTTTTATTCCCAAGGCAAAGCTGACGAG...GCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR-3UTR CAA 90 bp TGCAAGCATCAGTACACCCAGCAGAGTGGACACAGCACCGTCCAGAACGGGAGCATTTGGGGAAGTTGCTaGTTCTCCTCCAGCATGACA +
Preference number: 3 (lower is better)
Translates to: CKHQYTQQSGHSTVQNGSIWGSC*FSSSMT
Trigger: TGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAAT...GCTCCCGTTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp TTGAAACCCAAGCAGAGGTGCTTGGAGGGCTACCCATaGCCTCAGAAGCTGCCACACACAGGCATGAAGCAA +
Preference number: 3 (lower is better)
Translates to: LKPKQRCLEGYP*PQKLPHTGMKQ
Trigger: TTGCTTCATGCCTGTGTGTGGCAGCTTCTGAGGTCATGGGTAGCCCTCCAAGCACCTCTGCTTGGGTTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp GGAGCAAACATGTGCTCCAGAGCGAGCATAGCCCTGTaGTTCTTGTCCCCAATGGCTGTCAGAAAGGCCAAA +
Preference number: 3 (lower is better)
Translates to: GANMCSRASIAL*FLSPMAVRKAK
Trigger: TTTGGCCTTTCTGACAGCCATTGGGGACAAGAACCACAGGGCTATGCTCGCTCTGGAGCACATGTTTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACCTAATGTCGATGGGCTaGTCTCGGCTGCCAGTCTGC +
Preference number: 3 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHLMSMG*SRLPVC
Trigger: GCAGACTGGCAGCCGAGACAAGCCCATCGACATTAG...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp CAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATaGGGGACACAATCAAGAACCACAGCCAAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: QTSFCHMHKAQA*GTQSRTTAKVA
Trigger: AGCCACCTTGGCTGTGGTTCTTGATTGTGTCCCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp ATGAGCCAACCATGCCCTCCATCAGAAAGACCGACATaGCAGAAGCTTGGCAATGCCTCAAGGCTGGTCAAT +
Preference number: 3 (lower is better)
Translates to: MSQPCPPSERPT*QKLGNASRLVN
Trigger: ATTGACCAGCCTTGAGGCATTGCCAAGCTTCTGGCATGTCGGTCTTTCTGATGGAGGGCATGGTTGGCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 72 bp AAACAATTTGGCGCAGGAGGAAAAGCAGCCCACTTCTaGAGGCAGCTAATCCACTGTGAAATGCCCCTGCCT +
Preference number: 3 (lower is better)
Translates to: KQFGAGGKAAHF*RQLIHCEMPLP
Trigger: AGGCAGGGGCATTTCACAGTGGATTAGCTGCCTGCAGAAGTGGGCTGCTTTTCCTCCTGCGCCAAATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp TTCTTGTCCCCAATGGCTGTCAGAAAGGCCAAAGCCACGTGGACGGTGAACTCCGGGGCTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: FLSPMAVRKAKATWTVNSGAFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAAGCCCC...GGAGTTCACCGTCCACGTGGCTTTGGCCTTTCTGACAGCCATTGGGGACAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGGTAGTGCAGCCACATTaGGGGAAGTTGCTTGTTCTC +
Preference number: 3 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVVVQPH*GKLLVL
Trigger: GAGAACAAGCAACTTCCCCAAATGTGGCTGCACTAC...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGCGCAGGCTGATGTATaGCTCCCAGAACAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAAQADV*LPEQEG
Trigger: CCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCGC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCACTCTAAGGATGAGTTaGGCCTCGTCAGCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSTLRMS*ASSALP
Trigger: AGGCAAAGCTGACGAGGCCAAACTCATCCTTAGAGT...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CAA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCCCACAATACAGTACATaGGAAAGTCACATGCACACA +
Preference number: 3 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPPQYST*ESHMHT
Trigger: TGTGTGCATGTGACTTTCCAATGTACTGTATTGTGG...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTAAAGAAACCCAAACCTaGGGGAAGGAGAACACAATC +
Preference number: 3 (lower is better)
Translates to: PHSTSPSSTQGARYPSRAKETQT*GKENTI
Trigger: GATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTT...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp GAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATaGACAAGGCTCAGGCATGAGGGACACAATCAAGAA +
Preference number: 3 (lower is better)
Translates to: EAERLYKLPSAT*TRLRHEGHNQE
Trigger: TTCTTGATTGTGTCCCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp GACCGACATGCCAGAAGCTTGGCAATGCCTCAAGGCTaGTCAATGAACTCACACCCTTTCTTTTTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: DRHARSLAMPQG*SMNSHPFFFLL
Trigger: GAGGAGGAAAAAGAAAGGGTGTGAGTTCATTGACCAGCCTTGAGGCATTGCCAAGCTTCTGGCATGTCGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTCTCGTCAGCTTTGCCTaGGGAATAAAAGGTCCCCCA +
Preference number: 3 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDALVSFA*GIKGPP
Trigger: TGGGGGACCTTTTATTCCCAAGGCAAAGCTGACGAG...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CAA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCAACTCTAAGGATGAGTTaGGCCTCGTCAGCTTTGCCT +
Preference number: 3 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHATLRMS*ASSALP
Trigger: AGGCAAAGCTGACGAGGCCAAACTCATCCTTAGAGT...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR-3UTR CAA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCGGGGCTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSGAFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAAGCCCC...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCAGACCACAATACAGTACATaGGAAAGTCACATGCACACA +
Preference number: 3 (lower is better)
Translates to: AGDTSGHGPKKDKRTGSRPQYST*ESHMHT
Trigger: TGTGTGCATGTGACTTTCCAATGTACTGTATTGTGG...TCTGCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGAAAGAAACCCAAACCTaGGGGAAGGAGAACACAATC +
Preference number: 3 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVKETQT*GKENTI
Trigger: GATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTT...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCACCACAACCTTGGCTTaGGGTTTCAGGAGGAAAGGA +
Preference number: 3 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCTTTLA*GFRRKG
Trigger: TCCTTTCCTCCTGAAACCCAAAGCCAAGGTTGTGGT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp TCTTCTGCCTACTCTACTCTCAATGAGCCAACCATGCCCTCCATCAGAAAGACCCCACATTTGGGGAAGTaGCTTGTTCTCCTCCAGCAT +
Preference number: 3 (lower is better)
Translates to: SSAYSTLNEPTMPSIRKTPHLGK*LVLLQH
Trigger: ATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTGG...GGTCTTTCTGATGGAGGGCATGGTTGGCTCATTGAGAGTAGAGTAGGCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 72 bp AGGAGGTCACATTATGGTCACTACCACACTGAACTGTaGGCCTTACACAGCACAGCTCTTTACTCCCAGTGG +
Preference number: 3 (lower is better)
Translates to: RRSHYGHYHTEL*ALHSTALYSQW
Trigger: CCACTGGGAGTAAAGAGCTGTGCTGTGTAAGGCTCACAGTTCAGTGTGGTAGTGACCATAATGTGACCTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR TCA 72 bp AAAAGAGTCCTTAGAAACTCTCCCCACACAGTTGACTaGACCACGATTAGCCTAGCCTGCTCCAACCAGGCA +
Preference number: 3 (lower is better)
Translates to: KRVLRNSPHTVD*TTISLACSNQA
Trigger: TGCCTGGTTGGAGCAGGCTAGGCTAATCGTGGTTCAGTCAACTGTGTGGGGAGAGTTTCTAAGGACTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCGGGGCTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCGAFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAAGCCCC...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCAGAGAACATCTTCTCTTaGAAACCCAAGCAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHAENIFS*KPKQRC
Trigger: GCACCTCTGCTTGGGTTTCAAAGAGAAGATGTTCTC...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CCATTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCACTCTCTTCTCTCCCTaGCTGTCATTTATAACGAAA +
Preference number: 3 (lower is better)
Translates to: PLAGDTSGHGPKKDKRTGTLFSP*LSFITK
Trigger: TTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGT...GCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CTGGAAGACAAAAGGGATATGGGACATGTCAGCGAGGAAGGAGAGCATTCCACGAACATTGCCTTAGAGTaGCTTCTTTCTCGGGTGGTT +
Preference number: 3 (lower is better)
Translates to: LEDKRDMGHVSEEGEHSTNIALE*LLSRVV
Trigger: AACCACCCGAGAAAGAAGCAACTCTAAGGCAATGTT...CGTGGAATGCTCTCCTTCCTCGCTGACATGTCCCATATCCCTTTTGTCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 72 bp AAAAGCAGCCCACTTCTGCAGGCAGCTAATCCACTGTaGAATGCCCCTGCCTCTTACAGCAGAATCTCTAAT +
Preference number: 3 (lower is better)
Translates to: KSSPLLQAANPL*NAPASYSRISN
Trigger: ATTAGAGATTCTGCTGTAAGAGGCAGGGGCATTTCACAGTGGATTAGCTGCCTGCAGAAGTGGGCTGCTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 72 bp TTCAGCTTACCTGACAATGAAATCAAATTCGGACCCTaGAAGCATCAGTACACCCAGCAGAGTGGACACAGC +
Preference number: 3 (lower is better)
Translates to: FSLPDNEIKFGP*KHQYTQQSGHS
Trigger: GCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCAGGGTCCGAATTTGATTTCATTGTCAGGTAAGCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp CGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTaGATGGATGCTAACAGTGGGGAAGAGAAGAAAGTA +
Preference number: 3 (lower is better)
Translates to: RGGIFLLSQTSH*MDANSGEEKKV
Trigger: TACTTTCTTCTCTTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTCAATCTTTGGCCTCTTaGCTTCAGATTTTAATTACC +
Preference number: 3 (lower is better)
Translates to: PHSTSPSSTQGARYPSRAQSLAS*LQILIT
Trigger: GGTAATTAAAATCTGAAGCAAAGAGGCCAAAGATTG...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCCCACAATACAGTACATaGGAAAGTCACATGCACACA +
Preference number: 3 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSPQYST*ESHMHT
Trigger: TGTGTGCATGTGACTTTCCAATGTACTGTATTGTGG...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCCTAATGTCGATGGGCTaGTCTCGGCTGCCAGTCTGC +
Preference number: 3 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSLMSMG*SRLPVC
Trigger: GCAGACTGGCAGCCGAGACAAGCCCATCGACATTAG...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCGGCACAGCACTCAGCTaGATCCCAATGAGGCCCATC +
Preference number: 3 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSGTALS*IPMRPI
Trigger: GATGGGCCTCATTGGGATCAAGCTGAGTGCTGTGCC...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCAAGTCATCTGCATGGTaGTTAGAACTCTGCTGTAAG +
Preference number: 3 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCKSSAW*LELCCK
Trigger: CTTACAGCAGAGTTCTAACAACCATGCAGATGACTT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
3UTR TCA 72 bp ATAGGCAGCACAATGTTTGTGAGAACATCTTCTCTTTaGAACCCAAGCAGAGGTGCTTGGAGGGCTACCCAT +
Preference number: 3 (lower is better)
Translates to: IGSTMFVRTSSL*NPSRGAWRATH
Trigger: ATGGGTAGCCCTCCAAGCACCTCTGCTTGGGTTTCAAAGAGAAGATGTTCTCACAAACATTGTGCTGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp CTAAATTTGACCCTGCAGTCAGGTACCCAGCATTTATaGAGCCTCAGAAGGGACCCAAACACAAAATCTGGG +
Preference number: 3 (lower is better)
Translates to: LNLTLQSGTQHL*SLRRDPNTKSG
Trigger: CCCAGATTTTGTGTTTGGGTCCCTTCTGAGGCTTCATAAATGCTGGGTACCTGACTGCAGGGTCAAATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 72 bp GACAGCAACTCAAAGCTGTTCTCTACTATGGGAGTTTaGGGCAAGCCTGGGCTACATGAGACCTGTTTTGTA +
Preference number: 3 (lower is better)
Translates to: DSNSKLFSTMGV*GKPGLHETCFV
Trigger: TACAAAACAGGTCTCATGTAGCCCAGGCTTGCCTCAAACTCCCATAGTAGAGAACAGCTTTGAGTTGCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 72 bp TGGCATGATCCTCCCAGTTTCCCAGTCACTGTCAAATaGATCCTGAAGTCCTTGAAGCCAGTCTCTAAAGTA +
Preference number: 3 (lower is better)
Translates to: WHDPPSFPVTVK*ILKSLKPVSKV
Trigger: TACTTTAGAGACTGGCTTCAAGGACTTCAGGATGCATTTGACAGTGACTGGGAAACTGGGAGGATCATGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACGAGAACATCTTCTCTTaGAAACCCAAGCAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDENIFS*KPKQRC
Trigger: GCACCTCTGCTTGGGTTTCAAAGAGAAGATGTTCTC...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR GCA 72 bp AAAGAAGTATCTGACAATGAAATCAAATTCGGACCCTaGAAGCATCAGTACACCCAGCAGAGTGGACACAGC +
Preference number: 3 (lower is better)
Translates to: KEVSDNEIKFGP*KHQYTQQSGHS
Trigger: GCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCAGGGTCCGAATTTGATTTCATTGTCAGATACTTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
3UTR-3UTR CAA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATTGCATCCTGAAGTCCTaGAAGCCAGTCTCTAAAGTA +
Preference number: 3 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHCILKS*KPVSKV
Trigger: TACTTTAGAGACTGGCTTCAAGGACTTCAGGATGCA...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR TCA 72 bp TACTTGGCCAGCCTGTGTGTACACACATGTAAAGCTTaGTTAGTGCCAGATGTGGTAGCACATGCCTATAAT +
Preference number: 3 (lower is better)
Translates to: YLASLCVHTCKA*LVPDVVAHAYN
Trigger: ATTATAGGCATGTGCTACCACATCTGGCACTAATCAAGCTTTACATGTGTGTACACACAGGCTGGCCAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 72 bp ACGTGTTACACCAACACAGGAATATGGAATGTGAGCTaGATGGCTGAGCACCCTGAAAGTACAGATACAATG +
Preference number: 3 (lower is better)
Translates to: TCYTNTGIWNVS*MAEHPESTDTM
Trigger: CATTGTATCTGTACTTTCAGGGTGCTCAGCCATTCAGCTCACATTCCATATTCCTGTGTTGGTGTAACACGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR GCA 72 bp GTAGATGTAGAAAGCGCTCGGATTAATGATGCCATCTaGGTCTACCAGACGCTGTTTAGTCAACTGACTAAT +
Preference number: 3 (lower is better)
Translates to: VDVESARINDAI*VYQTLFSQLTN
Trigger: ATTAGTCAGTTGACTAAACAGCGTCTGGTAGACGCAGATGGCATCATTAATCCGAGCGCTTTCTACATCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp TGGTTCAAAGAGCTTACCCTATATGCTTTTACGAGGTaGCATCTTCCTGCTTTCACAGACATCACACTGGAT +
Preference number: 3 (lower is better)
Translates to: WFKELTLYAFTR*HLPAFTDITLD
Trigger: ATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTTGAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCGAGAACATCTTCTCTTaGAAACCCAAGCAGAGGTGC +
Preference number: 3 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSENIFS*KPKQRC
Trigger: GCACCTCTGCTTGGGTTTCAAAGAGAAGATGTTCTC...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACGTCCTCAATGTTCACTaGCAAGGAATAAGGGCATTT +
Preference number: 3 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDVLNVH*QGIRAF
Trigger: AAATGCCCTTATTCCTTGCAAGTGAACATTGAGGAC...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTGTCCTCAATGTTCACTaGCAAGGAATAAGGGCATTT +
Preference number: 3 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAVLNVH*QGIRAF
Trigger: AAATGCCCTTATTCCTTGCAAGTGAACATTGAGGAC...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CCCCTCTCGAGAACCCAGCAGAAGCAAACAAATGAAGTACAGGGCGTAGAATTTTTGAATACTCTTGTTTaGCGTCAGCCAATTCAAACA +
Preference number: 3 (lower is better)
Translates to: PLSRTQQKQTNEVQGVEFLNTLV*RQPIQT
Trigger: TGTTTGAATTGGCTGACGCAAAACAAGAGTATTCAA...AAATTCTACGCCCTGTACTTCATTTGTTTGCTTCTGCTGGGTTCTCGAGAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 72 bp TATGAACGTGTTACACCAACACAGGAATATGGAATGTaGGCTGAATGGCTGAGCACCCTGAAAGTACAGATA +
Preference number: 3 (lower is better)
Translates to: YERVTPTQEYGM*AEWLSTLKVQI
Trigger: TATCTGTACTTTCAGGGTGCTCAGCCATTCAGCTCACATTCCATATTCCTGTGTTGGTGTAACACGTTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp GAAGGAGAACACAATCAAACTCTAAAGCCCAACACCTaGTTCAAAGAGCTTACCCTATATGCTTTTACGAGG +
Preference number: 3 (lower is better)
Translates to: EGEHNQTLKPNT*FKELTLYAFTR
Trigger: CCTCGTAAAAGCATATAGGGTAAGCTCTTTGAACCAGGTGTTGGGCTTTAGAGTTTGATTGTGTTCTCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp TCCCTGGCTATCCTCAAACTCAATATAGCCAAGGGTTaGGATTACAGAGATAAGCCACAGAAAAGGAATAAG +
Preference number: 3 (lower is better)
Translates to: SLAILKLNIAKG*DYRDKPQKRNK
Trigger: CTTATTCCTTTTCTGTGGCTTATCTCTGTAATCCCAACCCTTGGCTATATTGAGTTTGAGGATAGCCAGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACGGGGCTTTCCAATCTTaGGCCTCTTTGCTTCAGATT +
Preference number: 3 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNGAFQS*ASLLQI
Trigger: AATCTGAAGCAAAGAGGCCAAAGATTGGAAAGCCCC...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTTCTGTCGAAAGACTaGATGACTACTATGTACACT +
Preference number: 3 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLLLSKD*MTTMYT
Trigger: AGTGTACATAGTAGTCATCAAGTCTTTCGACAGAAG...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATACTCTCTTCTCTCCCTaGCTGTCATTTATAACGAAA +
Preference number: 3 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHTLFSP*LSFITK
Trigger: TTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGT...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CCA 72 bp TTTATGAAGCCTCAGAAGGGACCCAAACACAAAATCTaGGTACACTGTATCATTTCCTATGTGTACTTGAGC +
Preference number: 3 (lower is better)
Translates to: FMKPQKGPKHKI*VHCIISYVYLS
Trigger: GCTCAAGTACACATAGGAAATGATACAGTGTACCCAGATTTTGTGTTTGGGTCCCTTCTGAGGCTTCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTCAATCTTTGGCCTCTTaGCTTCAGATTTTAATTACC +
Preference number: 3 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAQSLAS*LQILIT
Trigger: GGTAATTAAAATCTGAAGCAAAGAGGCCAAAGATTG...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR-3UTR CAA 90 bp AAACTCAATATAGCCAAGGGTTGGGATTACAGAGATAAGCCACAGAAAAGGAATAGAACCATAGCAAAATaGAATACCACCACCACAGCA +
Preference number: 3 (lower is better)
Translates to: KLNIAKGWDYRDKPQKRNRTIAK*NTTTTA
Trigger: TGCTGTGGTGGTGGTATTCAATTTTGCTATGGTTCT...ATTCCTTTTCTGTGGCTTATCTCTGTAATCCCAACCCTTGGCTATATTGAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CCA 72 bp CTTTCATTAAGCACAACTTTCTGCCTAGAATTTCTCTaGGTTCCAGTTTTACCAAACAGCTCCAATTGCAAC +
Preference number: 3 (lower is better)
Translates to: LSLSTTFCLEFL*VPVLPNSSNCN
Trigger: GTTGCAATTGGAGCTGTTTGGTAAAACTGGAACCCAGAGAAATTCTAGGCAGAAAGTTGTGCTTAATGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 72 bp AAATACCTTACAGCTATTGTAAACACTAAAACCTGCTaGGTTGCATTAGTAAAAACCCAAGCTGCCAATGTC +
Preference number: 3 (lower is better)
Translates to: KYLTAIVNTKTC*VALVKTQAANV
Trigger: GACATTGGCAGCTTGGGTTTTTACTAATGCAACTCAGCAGGTTTTAGTGTTTACAATAGCTGTAAGGTATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR TCA 72 bp CATGTATACAGAGTCTGCTCATTTATTCAACTCCAGTaGGGACTTTATCCATCCTATTTTAGAAAATGGGAA +
Preference number: 3 (lower is better)
Translates to: HVYRVCSFIQLQ*GLYPSYFRKWE
Trigger: TTCCCATTTTCTAAAATAGGATGGATAAAGTCCTCACTGGAGTTGAATAAATGAGCAGACTCTGTATACATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGGGGTTCCGAGGGTTGTaGGAACGGGCCCCACGGGGC +
Preference number: 4 (lower is better)
Translates to: VPQGLVWATAQMALGSTTGFRGL*ERAPRG
Trigger: GCCCCGTGGGGCCCGTTCTCACAACCCTCGGAACCC...CGTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
3UTR CAA 72 bp AGTAGCTGGGCACAGAGCTGCCCATGGCGGTGGACGTaGGGTTCCGAGGGTTGTGAGAACGGGCCCCACGGG +
Preference number: 4 (lower is better)
Translates to: SSWAQSCPWRWT*GSEGCENGPHG
Trigger: CCCGTGGGGCCCGTTCTCACAACCCTCGGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGGAGCCAGAGTCCAGGTaGGGCTGTTGCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: VPQGLVWATAQMALGSTTEPESR*GCCRGV
Trigger: GACCCCTCGGCAACAGCCCCACCTGGACTCTGGCTC...CGTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
3UTR CAA 72 bp TCGTGTGACCAGGAGGCACGGCAAACCGGACGACACTaGGAGGCGGCTCAGGCGAAGGAGTGGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: SCDQEARQTGRH*EAAQAKEWAVG
Trigger: ACCGACTGCCCACTCCTTCGCCTGAGCCGCCTCCAAGTGTCGTCCGGTTTGCCGTGCCTCCTGGTCACACGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 72 bp GCCTTCTCTAGGGGGATCCCTTCGAGGCTGCTGGCCTaGCCGTCCAGGGGACAAGGAGCCAGAGTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: AFSRGIPSRLLA*PSRGQGARVQV
Trigger: CACCTGGACTCTGGCTCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGATCCCCCTAGAGAAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACACCACCACAGCAGCCTaGAGGGAGAACGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHTTTAA*RENARR
Trigger: CCTGCGAGCGTTCTCCCTCCAGGCTGCTGTGGTGGT...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
CDS-3UTR TCA 90 bp CCCACTCCGGCCGGTGAGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGTCTGTCCTGTTTCACTaGATGCATGGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PTPAGEAGCWPGRQRKLQSVLFH*MHGPGG
Trigger: TCCTCCTGGCCCATGCATTCAGTGAAACAGGACAGA...CTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGAGGGAGGCTGATGTCTaGAGTCCGGATGGACCACAG +
Preference number: 4 (lower is better)
Translates to: VPQGLVWATAQMALGSTTREADV*SPDGPQ
Trigger: CTGTGGTCCATCCGGACTCCAGACATCAGCCTCCCT...CGTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR TCA 90 bp AGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGGGTCGTTGCTGACCCACAATCCTGCAGCCACTaGCAGCGCAACCAACAGGAC +
Preference number: 4 (lower is better)
Translates to: RPDVGLGGSVSYRVVADPQSCSH*QRNQQD
Trigger: GTCCTGTTGGTTGCGCTGTCAGTGGCTGCAGGATTG...TGGGTCAGCAACGACCCTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCCGGCGTCGCAGTAGCTaGGCCGGTGCAGATAGTCCC +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGRRRSS*AGADSP
Trigger: GGGACTATCTGCACCGGCCCAGCTACTGCGACGCCG...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR CCA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCTCCCTTCGAGGCTGCTaGCCTTGCCGTCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GVTFPPASRQKKTWTFPASLRGC*PCRPGD
Trigger: GTCCCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGA...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCACCCACTCCGGCCGGTaGGGCCGGATGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSTHSGR*GRMLAW
Trigger: CCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGGT...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTGGGTTCCGAGGGTTGTaGGAACGGGCCCCACGGGGC +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGGFRGL*ERAPRG
Trigger: GCCCCGTGGGGCCCGTTCTCACAACCCTCGGAACCC...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTCAGAGCGTGGCTCGGCGGTGGTGTAGTACACGTGCGTGTGAGGGTCATACTCTGCACACGACTGGCCTaGAGTGCTGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: LRAWLGGGVVHVRVRVILCTRLA*SAESRC
Trigger: ACACCTGGACTCAGCACTCCAGGCCAGTCGTGTGCA...GAGTATGACCCTCACACGCACGTGTACTACACCACCGCCGAGCCACGCTCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTAGCCCCACGGCACCCTaGGACTTGGAGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRASPTAP*DLEQSQ
Trigger: CTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCACCACCACAGCAGCCTaGAGGGAGAACGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGTTTAA*RENARR
Trigger: CCTGCGAGCGTTCTCCCTCCAGGCTGCTGTGGTGGT...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
3UTR CAA 72 bp AAAGAAAACGCTGCCCATTCTGTGAGAGCCGGGGCATaGTGCAGGGCGAGGGCACTCCACAATGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KENAAHSVRAGA*CRARALHNGRA
Trigger: AGCCCTGCCATTGTGGAGTGCCCTCGCCCTGCACAATGCCCCGGCTCTCACAGAATGGGCAGCGTTTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CAA 72 bp GGCTCAGGCGAAGGAGTGGGCAGTCGGTTTAGGCCATaGGCTGGAGACACCTCAGGACACGGTCCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: GSGEGVGSRFRP*AGDTSGHGPKK
Trigger: CTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGGCCTAAACCGACTGCCCACTCCTTCGCCTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 72 bp GGCAAAGACAGGGTTTTCTGTGGCTTCCACAATCACTaGGTGGGCAGGGCCTCCGGCACCCTGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GKDRVFCGFHNH*VGRASGTLLCF
Trigger: GAAGCACAGCAGGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCACTGGCCTGGAGTGCTaGGTCCAGGTGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPTGLEC*VQVLQE
Trigger: CTCCTGCAACACCTGGACTCAGCACTCCAGGCCAGT...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCACTGGCCTGGAGTGCTaGGTCCAGGTGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGTGLEC*VQVLQE
Trigger: CTCCTGCAACACCTGGACTCAGCACTCCAGGCCAGT...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACACCCACTCCGGCCGGTaGGGCCGGATGTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHTHSGR*GRMLAW
Trigger: CCAGGCCAACATCCGGCCTCACCGGCCGGAGTGGGT...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCAGGCCCCACGGGGCCCTaGGCGGTCCCTATTGCTAGG +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHAGPTGP*AVPIAR
Trigger: CCTAGCAATAGGGACCGCTCAGGGCCCCGTGGGGCC...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGGCCTCCGGCACCCTaGTGTGCTTCGTATTGCCTG +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRAGPPAP*CASYCL
Trigger: CAGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCC...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCCCGGATGGACCACAGTaGACCGGGCAAAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGPDGPQ*TGQRQG
Trigger: ACCCTGTCTTTGCCCGGTCCACTGTGGTCCATCCGG...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGGCACAGAGCTGCCCATaGCGGTGGACGTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRAQSCP*RWTLGS
Trigger: GGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGC...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTACTGGCCTGGAGTGCTaGGTCCAGGTGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRATGLEC*VQVLQE
Trigger: CTCCTGCAACACCTGGACTCAGCACTCCAGGCCAGT...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CCATTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCACTGGCCTGGAGTGCTaGGTCCAGGTGTTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PLAGDTSGHGPKKDKRTGTGLEC*VQVLQE
Trigger: CTCCTGCAACACCTGGACTCAGCACTCCAGGCCAGT...GCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGGGGGAACAATGTCCGTaGGGTCCAGCCCGTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRGEQCP*GPARLS
Trigger: TGAGAGACGGGCTGGACCTCACGGACATTGTTCCCC...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGCGCTGTTTAGTCAACTaGCTAATGTCGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VPQGLVWATAQMALGSTTRCLVN*LMSMGL
Trigger: CAAGCCCATCGACATTAGTCAGTTGACTAAACAGCG...CGTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR TCA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCGACCCATTGTTCGTGTaGCCAGGAGGCACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: GVTFPPASRQKKTWTFPADPLFV*PGGTAN
Trigger: GTTTGCCGTGCCTCCTGGTCACACGAACAATGGGTC...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGCCAGACACCGTGGTCTaGGAGCTGTACTCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRPDTVV*ELYSES
Trigger: CGACTCGGAGTACAGCTCTCAGACCACGGTGTCTGG...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGGGCCCCACGGGGCCCTaGGCGGTCCCTATTGCTAGG +
Preference number: 4 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHEGPTGP*AVPIAR
Trigger: CCTAGCAATAGGGACCGCTCAGGGCCCCGTGGGGCC...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCGCTGAGTCCAGGTGTTaGAGGAGAGCCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: GVTFPPASRQKKTWTFPAAESRC*RRASVV
Trigger: GACCACAGAGGCTCTCCTGCAACACCTGGACTCAGC...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCAGGATCCCTTCGAGGCTaGTGGCCTTGCCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPGSLRG*WPCRPG
Trigger: CCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGATCC...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCGGATCCCTTCGAGGCTaGTGGCCTTGCCGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSGSLRG*WPCRPG
Trigger: CCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGATCC...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCTGCACACGACTGGCCTaGAGTGCTGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: GVTFPPASRQKKTWTFPACTRLA*SAESRC
Trigger: ACACCTGGACTCAGCACTCCAGGCCAGTCGTGTGCA...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCGCCAGGCCTCCAGGATaGCGGCTGCCCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDIARPPG*RLPCLH
Trigger: ATGAAGACAGGGCAGCCGCCATCCTGGAGGCCTGGC...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CAACTGACTAATGTCGATGGGCTTGTCTCGGCTGCCAGTCTGCACCAGGAGTTTACCACCACAGCAGCCTaGAGGGAGAACGCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: QLTNVDGLVSAASLHQEFTTTAA*RENARR
Trigger: CCTGCGAGCGTTCTCCCTCCAGGCTGCTGTGGTGGT...AAACTCCTGGTGCAGACTGGCAGCCGAGACAAGCCCATCGACATTAGTCAGTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
CDS-3UTR CCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCTCCACAATCACTTGGTaGGCAGGGCCTCCGGCACCC +
Preference number: 4 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDISTITW*AGPPAP
Trigger: GGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGA...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCATCCCTTCGAGGCTGCTaGCCTTGCCGTCCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPSLRGC*PCRPGD
Trigger: GTCCCCTGGACGGCAAGGCCAGCAGCCTCGAAGGGA...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCCCAGGGTCGTGGTTGTaGAGGGAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPPGSWL*REAPFE
Trigger: CTCAAAAGGTGCTTCCCTTCACAACCACGACCCTGG...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTCAATCCTGCAGCCACTaGCAGCGCAACCAACAGGAC +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRAQSCSH*QRNQQD
Trigger: GTCCTGTTGGTTGCGCTGTCAGTGGCTGCAGGATTG...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTCTACAGGGTCGTTGCTaGCCCAAGCGGTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRALQGRC*PKRSGR
Trigger: TCTACCTGACCGCTTGGGTCAGCAACGACCCTGTAG...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGTGGGCTTGTCTCGGCTaGCAGTCTGCACCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRWACLG*QSAPGV
Trigger: AACTCCTGGTGCAGACTGGCAGCCGAGACAAGCCCA...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACGGGCCTCCGGCACCCTaGTGTGCTTCGTATTGCCTG +
Preference number: 4 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYGPPAP*CASYCL
Trigger: CAGGCAATACGAAGCACAGCAGGGTGCCGGAGGCCC...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACAGCTGGGCACAGAGCTaGCCATGGCGGTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYSWAQS*PWRWTL
Trigger: CAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCT...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTCAGAGCGTGGCTCGGCGGTGGTGTAGTACACGTGCGTGTGAGGGTCATACTCTCATTAACTGGAACATaGTTTGCAGGGCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: LRAWLGGGVVHVRVRVILSLTGT*FAGRER
Trigger: GCGCTCACGCCCTGCAAACCATGTTCCAGTTAATGA...GAGTATGACCCTCACACGCACGTGTACTACACCACCGCCGAGCCACGCTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GAGGGATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCGCCAGGCCTCCAGGATaGCGGCTGCCCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: EGFREAACRQSTFLTTASARPPG*RLPCLH
Trigger: ATGAAGACAGGGCAGCCGCCATCCTGGAGGCCTGGC...GGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCAAGCCCCACGGCACCCTaGGACTTGGAGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHASPTAP*DLEQSQ
Trigger: CTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTTCGTGGGCGAAGCTGTaGCTGGTGTATGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGSWAKL*LVYGGG
Trigger: CCCACCCCCATACACCAGCCACAGCTTCGCCCACGA...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTCGTGGGCGAAGCTGTaGCTGGTGTATGGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTSWAKL*LVYGGG
Trigger: CCCACCCCCATACACCAGCCACAGCTTCGCCCACGA...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCCTGGAGTCTGAGAACTaGGAGAGCAGGTCCCTGGTA +
Preference number: 4 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPLESEN*ESRSLV
Trigger: TACCAGGGACCTGCTCTCCCAGTTCTCAGACTCCAG...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTGGGGGCTCGAGGCAGTaGAGGCTGGAGTCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGGGSRQ*RLESEN
Trigger: GTTCTCAGACTCCAGCCTCCACTGCCTCGAGCCCCC...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCAAACCGGACGACACTTaGAGGCGGCTCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDIKPDDT*RRLRRR
Trigger: CCTTCGCCTGAGCCGCCTCCAAGTGTCGTCCGGTTT...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGAAACCGGACGACACTTaGAGGCGGCTCAGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVKPDDT*RRLRRR
Trigger: CCTTCGCCTGAGCCGCCTCCAAGTGTCGTCCGGTTT...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTGCACAGAGCTGCCCATaGCGGTGGACGTTGGGTTCC +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGAQSCP*RWTLGS
Trigger: GGAACCCAACGTCCACCGCCATGGGCAGCTCTGTGC...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GAGGGATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCTGGGCTGGCAGTAGCTaGGCACAGAGCTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: EGFREAACRQSTFLTTASWAGSS*AQSCPW
Trigger: CCATGGGCAGCTCTGTGCCCAGCTACTGCCAGCCCA...GGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
3UTR CAA 72 bp TTTGCCTTGGGAATAAAAGGTCCCCCAGGGTCTAGTTaGGGCCACCGCTCAGATGGCCCTTGGAAGCACCAC +
Preference number: 4 (lower is better)
Translates to: FALGIKGPPGSS*GHRSDGPWKHH
Trigger: GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACCTTTTATTCCCAAGGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
CDS-3UTR TCA 90 bp GCTGAGGTTGTCCTGGGTGACGGTAACAGGCTGTACAGAGATCTCAGAGCGTGGAAGGGAAGCACCTTTTaGGTGGAGTTTGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: AEVVLGDGNRLYRDLRAWKGSTF*VEFGAT
Trigger: TGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTT...CCACGCTCTGAGATCTCTGTACAGCCTGTTACCGTCACCCAGGACAACCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCAAGCCGTCACAGTGGTaGTGGGCTGGCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTKPSQW*WAGSSW
Trigger: CCAGCTACTGCCAGCCCATCACCACTGTGACGGCTT...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCAAAGCCGTCACAGTGGTaGTGGGCTGGCAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPKPSQW*WAGSSW
Trigger: CCAGCTACTGCCAGCCCATCACCACTGTGACGGCTT...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp GTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACGATTAATGATGCCATCTaGGTCTACCAGACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VPQGLVWATAQMALGSTTINDAI*VYQTLF
Trigger: AAACAGCGTCTGGTAGACGCAGATGGCATCATTAAT...CGTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR GCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCAGCTGGGCACAGAGCTaGCCATGGCGGTGGACGTTG +
Preference number: 4 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCSWAQS*PWRWTL
Trigger: CAACGTCCACCGCCATGGGCAGCTCTGTGCCCAGCT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CCAGTGGCGCAGGCTGATGTATTGCTCCCAGAACAGGAAGGGGTAGCCATTGGGCGGTCCATGTACCCATaGCCAACTTCGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: PVAQADVLLPEQEGVAIGRSMYP*PTSALF
Trigger: GAATAAAGCCGAAGTTGGCCATGGGTACATGGACCG...CCCAATGGCTACCCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCGCCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGAGCCCCACGGCACCCTaGGACTTGGAGCAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWSPTAP*DLEQSQ
Trigger: CTGGGACTGCTCCAAGTCCCAGGGTGCCGTGGGGCT...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCATCCACAATCACTTGGTaGGCAGGGCCTCCGGCACCC +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHASTITW*AGPPAP
Trigger: GGGTGCCGGAGGCCCTGCCCACCAAGTGATTGTGGA...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAAAGCTGCCCATGGCGGTaGACGTTGGGTTCCGAGGGT +
Preference number: 4 (lower is better)
Translates to: GIFLLSQTSHWMDANSGESCPWR*TLGSEG
Trigger: ACCCTCGGAACCCAACGTCCACCGCCATGGGCAGCT...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
3UTR CAA 72 bp AACATGTGCTCCAGAGCGAGCATAGCCCTGTGGTTCTaGTCCCCAATGGCTGTCAGAAAGGCCAAAGCCACG +
Preference number: 4 (lower is better)
Translates to: NMCSRASIALWF*SPMAVRKAKAT
Trigger: CGTGGCTTTGGCCTTTCTGACAGCCATTGGGGACAAGAACCACAGGGCTATGCTCGCTCTGGAGCACATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCGAAGGCCCCAAATATaGGGAGACCCACAACCAAAA +
Preference number: 4 (lower is better)
Translates to: GVTFPPASRQKKTWTFPARRPQI*GDPQPK
Trigger: TTTTGGTTGTGGGTCTCCTCATATTTGGGGCCTTCG...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGTACTCTGTGCGGAGCTaGACGGTGGACTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVYSVRS*TVDCIV
Trigger: CACTATGCAGTCCACCGTTCAGCTCCGCACAGAGTA...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR TCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCATGGTCCCATAAAGGCTaGCCCCCAGCAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHAWSHKG*PPASPG
Trigger: TCCTGGGCTTGCTGGGGGTCAGCCTTTATGGGACCA...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGTATGACCTCCACCTTTaGGTCCCTCCTCTCACACCT +
Preference number: 4 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRYDLHL*VPPLTP
Trigger: AGGTGTGAGAGGAGGGACTCAAAGGTGGAGGTCATA...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CCGGTGAGGCCGGATGTTGGCCTGGGAGGCAGCGTAAGCTACAGGGTCGTTGCTAACTCCTCCTGCCAATaGATATACTTCCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: PVRPDVGLGGSVSYRVVANSSCQ*IYFLDK
Trigger: TTTATCCAGGAAGTATATGCATTGGCAGGAGGAGTT...AGCAACGACCCTGTAGCTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCATGGGCTTGTCTCGGCTaGCAGTCTGCACCAGGAGTT +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPWACLG*QSAPGV
Trigger: AACTCCTGGTGCAGACTGGCAGCCGAGACAAGCCCA...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACTGCACACGACTGGCCTaGAGTGCTGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYCTRLA*SAESRC
Trigger: ACACCTGGACTCAGCACTCCAGGCCAGTCGTGTGCA...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCTGCACACGACTGGCCTaGAGTGCTGAGTCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSCTRLA*SAESRC
Trigger: ACACCTGGACTCAGCACTCCAGGCCAGTCGTGTGCA...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCGGTCCATGTACCCATaGCCAACTTCGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: GVTFPPASRQKKTWTFPARSMYP*PTSALF
Trigger: GAATAAAGCCGAAGTTGGCCATGGGTACATGGACCG...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GAAAGGGAACTGAGCGTACTCGATGGGCTCTGCTGCTGGGATTCTCAGCCTGGTTCATTAACTGGAACATaGTTTGCAGGGCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: ERELSVLDGLCCWDSQPGSLTGT*FAGRER
Trigger: GCGCTCACGCCCTGCAAACCATGTTCCAGTTAATGA...ACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGTTCCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGCCAGGCCTCCAGGATaGCGGCTGCCCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAARPPG*RLPCLH
Trigger: ATGAAGACAGGGCAGCCGCCATCCTGGAGGCCTGGC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGGCCAGGCCTCCAGGATaGCGGCTGCCCTGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWARPPG*RLPCLH
Trigger: ATGAAGACAGGGCAGCCGCCATCCTGGAGGCCTGGC...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAAAGCGTGGCTCGGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: GIFLLSQTSHWMDANSGESVARR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCCGAGCCACGCT...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGGGGGCTCGAGGCAGTaGAGGCTGGAGTCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAGGSRQ*RLESEN
Trigger: GTTCTCAGACTCCAGCCTCCACTGCCTCGAGCCCCC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGGTGAGGCCGGATGTTaGCCTGGGAGGCAGCGTAAG +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAGEAGC*PGRQRK
Trigger: CTTACGCTGCCTCCCAGGCCAACATCCGGCCTCACC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCAGCCATTGGGGTAGCTaGACAGTCCCAGGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDISHWGS*TVPGSY
Trigger: ATACGAGCCTGGGACTGTCCAGCTACCCCAATGGCT...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCCATGGCGGTGGACGTTaGGTTCCGAGGGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTHGGGR*VPRVVR
Trigger: TCTCACAACCCTCGGAACCCAACGTCCACCGCCATG...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTCGAAGGCCCCAAATATaGGGAGACCCACAACCAAAA +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRARRPQI*GDPQPK
Trigger: TTTTGGTTGTGGGTCTCCTCATATTTGGGGCCTTCG...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACCAGGGTCGTGGTTGTaGAGGGAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPPGSWL*REAPFE
Trigger: CTCAAAAGGTGCTTCCCTTCACAACCACGACCCTGG...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGGTGGAGGCTGGAGTCTaGGAACTGGGAGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHEVEAGV*ELGEQV
Trigger: GACCTGCTCTCCCAGTTCTCAGACTCCAGCCTCCAC...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACTCGATGGGCTCTGCTaGTGGGATTCTCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHALDGLC*WDSQPG
Trigger: ACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAG...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTCGGTCCATGTACCCATaGCCAACTTCGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRARSMYP*PTSALF
Trigger: GAATAAAGCCGAAGTTGGCCATGGGTACATGGACCG...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp AAGACAGGGTTTTCTGTGGCTTCCACAATCACTTGGTGGGCAGGGCCTCCGGCATTGGGAGTCATTAACTaGAACATGGTTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KTGFSVASTITWWAGPPALGVIN*NMVCRA
Trigger: CGCCCTGCAAACCATGTTCCAGTTAATGACTCCCAA...TGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGAGCGTGGCTCGGCGGTaGTGTAGTACACGTGCGTGT +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWSVARR*CSTRAC
Trigger: ACACGCACGTGTACTACACCACCGCCGAGCCACGCT...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCGGATTACCACAACCTTaGCTTTGGGTTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGGLPQP*LWVSGG
Trigger: TCCTCCTGAAACCCAAAGCCAAGGTTGTGGTAATCC...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTGATAGCAGCAGCCAGTaGCGCAGGCTGATGTATTGC +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGDSSSQ*RRLMYC
Trigger: GCAATACATCAGCCTGCGCCACTGGCTGCTGCTATC...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCAAGGCCAAAGCCACGTaGACGGTGAACTCCACTCCG +
Preference number: 4 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCKAKAT*TVNSTP
Trigger: CGGAGTGGAGTTCACCGTCCACGTGGCTTTGGCCTT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGGGTTCTTGTCCCCAATaGCTGTCAGAAAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRGSCPQ*LSERPK
Trigger: CTTTGGCCTTTCTGACAGCCATTGGGGACAAGAACC...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCGCGAGCATAGCCCTGTaGTTCTTGTCCCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTASIAL*FLSPMA
Trigger: AGCCATTGGGGACAAGAACCACAGGGCTATGCTCGC...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGGCTTCCACAATCACTTaGTGGGCAGGGCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWASTIT*WAGPPA
Trigger: TGCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGC...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTCCGGATGGACCACAGTaGACCGGGCAAAGACAGGGT +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAPDGPQ*TGQRQG
Trigger: ACCCTGTCTTTGCCCGGTCCACTGTGGTCCATCCGG...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTAGAGCCAGAGTCCAGGTaGGGCTGTTGCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLEPESR*GCCRGV
Trigger: GACCCCTCGGCAACAGCCCCACCTGGACTCTGGCTC...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAATGGGCTGGCAGTAGCTaGGCACAGAGCTGCCCATGG +
Preference number: 4 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQWAGSS*AQSCPW
Trigger: CCATGGGCAGCTCTGTGCCCAGCTACTGCCAGCCCA...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
3UTR CAA 72 bp GTTACTGTGAGGCTCTGTGTAGGCCTGTGGCTCAACTaGAATCACCCTGCTGACACAGGGGCTTGTGAAACA +
Preference number: 4 (lower is better)
Translates to: VTVRLCVGLWLN*NHPADTGACET
Trigger: TGTTTCACAAGCCCCTGTGTCAGCAGGGTGATTCAAGTTGAGCCACAGGCCTACACAGAGCCTCACAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
3UTR CAA 72 bp CATGCCCTCCATCAGAAAGACCGACATGCCAGAAGCTaGGCAATGCCTCAAGGCTGGTCAATGAACTCACAC +
Preference number: 4 (lower is better)
Translates to: HALHQKDRHARS*AMPQGWSMNSH
Trigger: GTGTGAGTTCATTGACCAGCCTTGAGGCATTGCCAAGCTTCTGGCATGTCGGTCTTTCTGATGGAGGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACAAGGGAAGCACCTTTTaGGTGGAGTTTGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYKGSTF*VEFGAT
Trigger: TGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTT...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTCAATCCTGCAGCCACTaGCAGCGCAACCAACAGGAC +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAQSCSH*QRNQQD
Trigger: GTCCTGTTGGTTGCGCTGTCAGTGGCTGCAGGATTG...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTCTACAGGGTCGTTGCTaGCCCAAGCGGTCAGGTAGA +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDALQGRC*PKRSGR
Trigger: TCTACCTGACCGCTTGGGTCAGCAACGACCCTGTAG...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGGCCAGTGGCGCAGGCTaGTGTATTGCTCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWASGAG*CIAPRT
Trigger: TGTTCTGGGAGCAATACATCAGCCTGCGCCACTGGC...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGCCAGTGGCGCAGGCTaGTGTATTGCTCCCAGAACA +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAASGAG*CIAPRT
Trigger: TGTTCTGGGAGCAATACATCAGCCTGCGCCACTGGC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAAGGCCAGCACCACGCTaGTGGATAGCAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQRPAPR*WIAAAS
Trigger: ACTGGCTGCTGCTATCCATCAGCGTGGTGCTGGCCT...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GAGGGATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCCAGATGCAATCAGGATaGCCACAGGCACAGCACTCA +
Preference number: 4 (lower is better)
Translates to: EGFREAACRQSTFLTTASQMQSG*PQAQHS
Trigger: TGAGTGCTGTGCCTGTGGTCATCCTGATTGCATCTG...GGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACAGATGCAATCAGGATaGCCACAGGCACAGCACTCA +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPQMQSG*PQAQHS
Trigger: TGAGTGCTGTGCCTGTGGTCATCCTGATTGCATCTG...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAACCAGACACCGTGGTCTaGGAGCTGTACTCCGAGTCG +
Preference number: 4 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQPDTVV*ELYSES
Trigger: CGACTCGGAGTACAGCTCTCAGACCACGGTGTCTGG...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGCTGAGTCCAGGTGTTaGAGGAGAGCCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAAESRC*RRASVV
Trigger: GACCACAGAGGCTCTCCTGCAACACCTGGACTCAGC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGGCTGAGTCCAGGTGTTaGAGGAGAGCCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWAESRC*RRASVV
Trigger: GACCACAGAGGCTCTCCTGCAACACCTGGACTCAGC...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCAAGGGATAGGGATCAATaGGGCCATGAAGAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPRDRDQ*GHEEGG
Trigger: ACCGCCTTCTTCATGGCCGCATTGATCCCTATCCCT...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CCCATAAAGGCTGACCCCCAGCAAGCCCAGGAAAAGAAGGATTACCACAACCTTAGGGATAGGGATCAATaGGGCCATGAAGAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PIKADPQQAQEKKDYHNLRDRDQ*GHEEGG
Trigger: ACCGCCTTCTTCATGGCCGCATTGATCCCTATCCCT...AAGGTTGTGGTAATCCTTCTTTTCCTGGGCTTGCTGGGGGTCAGCCTTTATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCCAGTCACTGTCAAATaGATCCTGAAGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: GVTFPPASRQKKTWTFPAPVTVK*ILKSLK
Trigger: CTTCAAGGACTTCAGGATGCATTTGACAGTGACTGG...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTCTCGATGGGCTCTGCTaGTGGGATTCTCAGCCTGGT +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDALDGLC*WDSQPG
Trigger: ACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAG...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACGCAGGCTGATGTATTaGTCCCAGAACAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHARRLMY*SQNRKG
Trigger: CCCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCG...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCAGAGATCTCAGAGCGTaGCTCGGCGGTGGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCRDLRA*LGGGVV
Trigger: TACTACACCACCGCCGAGCCACGCTCTGAGATCTCT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACCTGGGATTCTCAGCCTaGTCTCTGGCATGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHLGFSA*SLACSR
Trigger: CCGACTACATGCCAGAGACCAGGCTGAGAATCCCAG...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACACTGAGCGTACTCGATaGGCTCTGCTGCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHTERTR*ALLLGF
Trigger: GAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGT...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGGGAAGGGGTAGCCATTaGGGTAGCTGGACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHEGRGSH*GSWTVP
Trigger: TGGGACTGTCCAGCTACCCCAATGGCTACCCCTTCC...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGAAGGCCAAAGCCACGTaGACGGTGAACTCCACTCCG +
Preference number: 4 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHEKAKAT*TVNSTP
Trigger: CGGAGTGGAGTTCACCGTCCACGTGGCTTTGGCCTT...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCAGACAGGGTTTTCTGTaGCTTCCACAATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGRQGFL*LPQSLG
Trigger: ACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCT...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp TGCAAGCATCAGTACACCCAGCAGAGTGGACACAGCACCGTCCAGAACGGGAGCATCAAGAGGTTTGGTTaGATTTTTGTTAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CKHQYTQQSGHSTVQNGSIKRFG*IFVRGC
Trigger: ACAGCCCCTAACAAAAATTCAACCAAACCTCTTGAT...GCTCCCGTTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ACTGAGCGTACTCGATGGGCTCTGCTGCTGGGATTCTCAGCCTGGTCTCTGGCATTCCTGGATAAACCTTaGCATCCACCATTCAAAACA +
Preference number: 4 (lower is better)
Translates to: TERTRWALLLGFSAWSLAFLDKP*HPPFKT
Trigger: TGTTTTGAATGGTGGATGTCAAGGTTTATCCAGGAA...TGCCAGAGACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCAAAGGGAAGCACCTTTTaGGTGGAGTTTGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHAKGSTF*VEFGAT
Trigger: TGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTT...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACTCTGTCCTGTTTCACTaGATGCATGGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHSVLFH*MHGPGG
Trigger: TCCTCCTGGCCCATGCATTCAGTGAAACAGGACAGA...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTTACTCTGTGCGGAGCTaGACGGTGGACTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAYSVRS*TVDCIV
Trigger: CACTATGCAGTCCACCGTTCAGCTCCGCACAGAGTA...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR TCA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTATGGTCCCATAAAGGCTaGCCCCCAGCAAGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLWSHKG*PPASPG
Trigger: TCCTGGGCTTGCTGGGGGTCAGCCTTTATGGGACCA...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGCGTCCTGTAGCTCTATaGCCTCCACCTTTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWRPVAL*PPPLSP
Trigger: GGGACTCAAAGGTGGAGGTCATAGAGCTACAGGACG...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAGGGATAGGGATCAATaGGGCCATGAAGAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHRDRDQ*GHEEGG
Trigger: ACCGCCTTCTTCATGGCCGCATTGATCCCTATCCCT...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GAGGGATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCTCATTAACTGGAACATaGTTTGCAGGGCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: EGFREAACRQSTFLTTASSLTGT*FAGRER
Trigger: GCGCTCACGCCCTGCAAACCATGTTCCAGTTAATGA...GGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCTCATTAACTGGAACATaGTTTGCAGGGCGTGAGCGC +
Preference number: 4 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSSLTGT*FAGRER
Trigger: GCGCTCACGCCCTGCAAACCATGTTCCAGTTAATGA...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGTTGGGAGTCATTAACTaGAACATGGTTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVLGVIN*NMVCRA
Trigger: CGCCCTGCAAACCATGTTCCAGTTAATGACTCCCAA...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACTCTGTGTAGGCCTGTaGCTCAACTTGAATCACCCT +
Preference number: 4 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPLCVGL*LNLNHP
Trigger: AGGGTGATTCAAGTTGAGCCACAGGCCTACACAGAG...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGAGAGATCTCAGAGCGTaGCTCGGCGGTGGTGTAGTA +
Preference number: 4 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHERDLRA*LGGGVV
Trigger: TACTACACCACCGCCGAGCCACGCTCTGAGATCTCT...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GAGAATAGGACAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGATGGGCTCTGCTGCTaGGATTCTCAGCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ENRTDDWGHLSTSITTEKDGLCC*DSQPGL
Trigger: GAGACCAGGCTGAGAATCCCAGCAGCAGAGCCCATC...TTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTGTCCTATTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAGCCATTGGGGTAGCTaGACAGTCCCAGGCTCGTAT +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDASHWGS*TVPGSY
Trigger: ATACGAGCCTGGGACTGTCCAGCTACCCCAATGGCT...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGATAGCAGCAGCCAGTaGCGCAGGCTGATGTATTGC +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDADSSSQ*RRLMYC
Trigger: GCAATACATCAGCCTGCGCCACTGGCTGCTGCTATC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTGGTTCTTGTCCCCAATaGCTGTCAGAAAGGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGGSCPQ*LSERPK
Trigger: CTTTGGCCTTTCTGACAGCCATTGGGGACAAGAACC...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
3UTR CAA 72 bp TCTCATGACCCGGCTGAGTCTCACCATCAGGCAACATaGTCCAATCTTTCACCACTAGTGCTGACTGCTGAC +
Preference number: 4 (lower is better)
Translates to: SHDPAESHHQAT*SNLSPLVLTAD
Trigger: GTCAGCAGTCAGCACTAGTGGTGAAAGATTGGACAATGTTGCCTGATGGTGAGACTCAGCCGGGTCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 72 bp CTGCAAGGTCTCCGCACACCCAACTTTCTCTCGGCTTaGAACTGCTTAGAGAGCTATATCTCCCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LQGLRTPNFLSA*NCLESYISQSL
Trigger: CAGGGATTGGGAGATATAGCTCTCTAAGCAGTTCAAAGCCGAGAGAAAGTTGGGTGTGCGGAGACCTTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTTCTGTCCTGTTTCACTaGATGCATGGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDASVLFH*MHGPGG
Trigger: TCCTCCTGGCCCATGCATTCAGTGAAACAGGACAGA...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGTCTGTCCTGTTTCACTaGATGCATGGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWSVLFH*MHGPGG
Trigger: TCCTCCTGGCCCATGCATTCAGTGAAACAGGACAGA...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCGAGGACCCCGTCATCTaGTCCATTTTTATAATTGTT +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGEDPVI*SIFIIV
Trigger: AACAATTATAAAAATGGATCAGATGACGGGGTCCTC...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACGACCCATTGTTCGTGTaGCCAGGAGGCACGGCAAAC +
Preference number: 4 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDDPLFV*PGGTAN
Trigger: GTTTGCCGTGCCTCCTGGTCACACGAACAATGGGTC...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATTTCCCCTTGGAAATCTaGTCCAGAGCGAAGGCGGCG +
Preference number: 4 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHFPLEI*SRAKAA
Trigger: CGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGAA...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR GCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCAACTCCTCCTGCCAATaGATATACTTCCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGNSSCQ*IYFLDK
Trigger: TTTATCCAGGAAGTATATGCATTGGCAGGAGGAGTT...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CCCCTCTCGAGAACCCAGCAGAAGCAAACAAATGAAGTACAGGGCGTAGAATTTAGGGATAGGGATCAATaGGGCCATGAAGAAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PLSRTQQKQTNEVQGVEFRDRDQ*GHEEGG
Trigger: ACCGCCTTCTTCATGGCCGCATTGATCCCTATCCCT...AAATTCTACGCCCTGTACTTCATTTGTTTGCTTCTGCTGGGTTCTCGAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 4 (lower is better)
Translates to: VLPALADGTHDDAQKPRGDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTGGGAGTCATTAACTaGAACATGGTTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTLGVIN*NMVCRA
Trigger: CGCCCTGCAAACCATGTTCCAGTTAATGACTCCCAA...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp TGCAAGCATCAGTACACCCAGCAGAGTGGACACAGCACCGTCCAGAACGGGAGCGTTCATACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: CKHQYTQQSGHSTVQNGSVHTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTATGAAC...GCTCCCGTTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTCATGGCGGTGGACGTTaGGTTCCGAGGGTTGTGAGA +
Preference number: 4 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAHGGGR*VPRVVR
Trigger: TCTCACAACCCTCGGAACCCAACGTCCACCGCCATG...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTTACTCTGTGCGGAGCTaGACGGTGGACTGCATAGTG +
Preference number: 4 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAYSVRS*TVDCIV
Trigger: CACTATGCAGTCCACCGTTCAGCTCCGCACAGAGTA...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR TCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACGCTGTTTAGTCAACTaGCTAATGTCGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHARCLVN*LMSMGL
Trigger: CAAGCCCATCGACATTAGTCAGTTGACTAAACAGCG...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCAGGCCAGCACCACGCTaGTGGATAGCAGCAGCCAGT +
Preference number: 4 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSRPAPR*WIAAAS
Trigger: ACTGGCTGCTGCTATCCATCAGCGTGGTGCTGGCCT...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAATATGACCTCCACCTTTaGGTCCCTCCTCTCACACCT +
Preference number: 4 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQYDLHL*VPPLTP
Trigger: AGGTGTGAGAGGAGGGACTCAAAGGTGGAGGTCATA...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTAACTCCTCCTGCCAATaGATATACTTCCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: PHSTSPSSTQGARYPSRANSSCQ*IYFLDK
Trigger: TTTATCCAGGAAGTATATGCATTGGCAGGAGGAGTT...AGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGACAATCAACTCCTCCTaGCAATGCATATACTTCCTG +
Preference number: 4 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVTINSS*QCIYFL
Trigger: CAGGAAGTATATGCATTGGCAGGAGGAGTTGATTGT...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCAGCATAGTGCTTCTCTaGAAACGAAGAGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTSIVLL*KRRECP
Trigger: TGGACACTCTCTTCGTTTGCAGAGAAGCACTATGCT...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACCGCAGGCTGATGTATTaGTCCCAGAACAGGAAGGGG +
Preference number: 4 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDRRLMY*SQNRKG
Trigger: CCCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCG...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTCTGGGATTCTCAGCCTaGTCTCTGGCATGTAGTCGG +
Preference number: 4 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLALGFSA*SLACSR
Trigger: CCGACTACATGCCAGAGACCAGGCTGAGAATCCCAG...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATACTGAGCGTACTCGATaGGCTCTGCTGCTGGGATTC +
Preference number: 4 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHTERTR*ALLLGF
Trigger: GAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGT...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACGCGAGCATAGCCCTGTaGTTCTTGTCCCCAATGGCT +
Preference number: 4 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDASIAL*FLSPMA
Trigger: AGCCATTGGGGACAAGAACCACAGGGCTATGCTCGC...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTAGACAGGGTTTTCTGTaGCTTCCACAATCACTTGGT +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGRQGFL*LPQSLG
Trigger: ACCAAGTGATTGTGGAAGCCACAGAAAACCCTGTCT...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGATCAAGAGGTTTGGTTaGATTTTTGTTAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVIKRFG*IFVRGC
Trigger: ACAGCCCCTAACAAAAATTCAACCAAACCTCTTGAT...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CGGGTAGTCTGCTTTCTGGGTGACTATATACATGTTGTAGAAAGAGAAGTACTTCAATCCTGCAGCCACTaGCAGCGCAACCAACAGGAC +
Preference number: 4 (lower is better)
Translates to: RVVCFLGDYIHVVEREVLQSCSH*QRNQQD
Trigger: GTCCTGTTGGTTGCGCTGTCAGTGGCTGCAGGATTG...AAGTACTTCTCTTTCTACAACATGTATATAGTCACCCAGAAAGCAGACTACCCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACGTGGAGGCTGGAGTCTaGGAACTGGGAGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNVEAGV*ELGEQV
Trigger: GACCTGCTCTCCCAGTTCTCAGACTCCAGCCTCCAC...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp GAGGGATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCTATAATTGTTTGGCATaGTCCTCCCAGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: EGFREAACRQSTFLTTASYNCLA*SSQFPS
Trigger: ACTGGGAAACTGGGAGGATCATGCCAAACAATTATA...GGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAATCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp ATTATGGTCACTACCACACTGAACTGTGAGCCTTACACAGCACAGCTCTTTACTCCCTCCTCTCACACCTaGCATGAAAAGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: IMVTTTLNCEPYTAQLFTPSSHT*HEKAHE
Trigger: CTCATGTGCCTTTTCATGTCAGGTGTGAGAGGAGGG...AGTAAAGAGCTGTGCTGTGTAAGGCTCACAGTTCAGTGTGGTAGTGACCATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR TCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCCCTCCTCTCACACCTaGCATGAAAAGGCACATGAG +
Preference number: 4 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLPSSHT*HEKAHE
Trigger: CTCATGTGCCTTTTCATGTCAGGTGTGAGAGGAGGG...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCGCTGAGTCCAGGTGTTaGAGGAGAGCCTCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSAESRC*RRASVV
Trigger: GACCACAGAGGCTCTCCTGCAACACCTGGACTCAGC...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCAACTCCTCCTGCCAATaGATATACTTCCTGGATAAA +
Preference number: 4 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDINSSCQ*IYFLDK
Trigger: TTTATCCAGGAAGTATATGCATTGGCAGGAGGAGTT...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCACAATCAACTCCTCCTaGCAATGCATATACTTCCTG +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTTINSS*QCIYFL
Trigger: CAGGAAGTATATGCATTGGCAGGAGGAGTTGATTGT...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CCCATAAAGGCTGACCCCCAGCAAGCCCAGGAAAAGAAGGATTACCACAACCTTACAATCAACTCCTCCTaGCAATGCATATACTTCCTG +
Preference number: 4 (lower is better)
Translates to: PIKADPQQAQEKKDYHNLTINSS*QCIYFL
Trigger: CAGGAAGTATATGCATTGGCAGGAGGAGTTGATTGT...AAGGTTGTGGTAATCCTTCTTTTCCTGGGCTTGCTGGGGGTCAGCCTTTATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCAGCATAGTGCTTCTCTaGAAACGAAGAGAGTGTCCA +
Preference number: 4 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCSIVLL*KRRECP
Trigger: TGGACACTCTCTTCGTTTGCAGAGAAGCACTATGCT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGCACATTTGGGGAAGTTaGTTGTTCTCCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWHIWGS*LFSSSM
Trigger: CATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTG...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCAGCGCCTTCTTCTTTTaGAGTCTGTATCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTSAFFF*SLYHEL
Trigger: CAACTCATGATACAGACTCCAAAAGAAGAAGGCGCT...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GAGAATAGGACAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAACGGTCCATGTACCCATaGCCAACTTCGGCTTTATTC +
Preference number: 4 (lower is better)
Translates to: ENRTDDWGHLSTSITTEKRSMYP*PTSALF
Trigger: GAATAAAGCCGAAGTTGGCCATGGGTACATGGACCG...TTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTGTCCTATTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGGTTCATACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRVHTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTATGAAC...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGGGATTACCACAACCTTaGCTTTGGGTTTCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWGLPQP*LWVSGG
Trigger: TCCTCCTGAAACCCAAAGCCAAGGTTGTGGTAATCC...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTGATGGGCTCTGCTGCTaGGATTCTCAGCCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLDGLCC*DSQPGL
Trigger: GAGACCAGGCTGAGAATCCCAGCAGCAGAGCCCATC...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCGGAAGGGGTAGCCATTaGGGTAGCTGGACAGTCCCA +
Preference number: 4 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSGRGSH*GSWTVP
Trigger: TGGGACTGTCCAGCTACCCCAATGGCTACCCCTTCC...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTAGGGAGGCTGATGTCTaGAGTCCGGATGGACCACAG +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLREADV*SPDGPQ
Trigger: CTGTGGTCCATCCGGACTCCAGACATCAGCCTCCCT...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp ATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACTTAAATAAGAGTCTCTaGAACTTCGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: MMMHRSREAVQTSFCHMHLNKSL*NFALSH
Trigger: GTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAA...GTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACGTGATAAGTTCCCCTaGTTTGTAGCACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHARDKFP*FVAQMF
Trigger: GAACATTTGTGCTACAAATCAGGGGAACTTATCACG...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR TCA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTATCAAGAGGTTTGGTTaGATTTTTGTTAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGIKRFG*IFVRGC
Trigger: ACAGCCCCTAACAAAAATTCAACCAAACCTCTTGAT...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACTTCCTGGATAAACCTTaGCATCCACCATTCAAAACA +
Preference number: 4 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYFLDKP*HPPFKT
Trigger: TGTTTTGAATGGTGGATGTCAAGGTTTATCCAGGAA...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp TGCTTTCTGGGTGACTATATACATGTTGTAGAAAGAGAAGTACTTGAACTGGGCCCAGGGTCGTGGTTGTaGAGGGAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: CFLGDYIHVVEREVLELGPGSWL*REAPFE
Trigger: CTCAAAAGGTGCTTCCCTTCACAACCACGACCCTGG...GCCCAGTTCAAGTACTTCTCTTTCTACAACATGTATATAGTCACCCAGAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTCGTCCTGTAGCTCTATaGCCTCCACCTTTGAGTCCC +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLRPVAL*PPPLSP
Trigger: GGGACTCAAAGGTGGAGGTCATAGAGCTACAGGACG...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp GAGAATAGGACAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAACACATTTGGGGAAGTTaGTTGTTCTCCTCCAGCATG +
Preference number: 4 (lower is better)
Translates to: ENRTDDWGHLSTSITTEKHIWGS*LFSSSM
Trigger: CATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTG...TTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTGTCCTATTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTTCCGATGCCAACAGATaGAATCAGGATGACCACAGG +
Preference number: 4 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLASDANR*NQDDHR
Trigger: CCTGTGGTCATCCTGATTGCATCTGTTGGCATCGGA...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCATTGCTAGGGCCAGAATaGCCTTCAGTAGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHALLGPE*PSVEIS
Trigger: TGAAATTTCTACTGAAGGGCATTCTGGCCCTAGCAA...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAAAGCGCCTTCTTCTTTTaGAGTCTGTATCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: GIFLLSQTSHWMDANSGESAFFF*SLYHEL
Trigger: CAACTCATGATACAGACTCCAAAAGAAGAAGGCGCT...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCAGCGCCTTCTTCTTTTaGAGTCTGTATCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCSAFFF*SLYHEL
Trigger: CAACTCATGATACAGACTCCAAAAGAAGAAGGCGCT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTGTACACCCAGCAGAGTaGACACAGCACCGTCCAGAA +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLVHPAE*TQHRPE
Trigger: TTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTAC...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
3UTR CAA 72 bp TCCTTGAAGCCAGTCTCTAAAGTAGTGCAGCCACATTaGGGGAAGTTGCTTGTTCTCCTCCAGCATGACATA +
Preference number: 4 (lower is better)
Translates to: SLKPVSKVVQPH*GKLLVLLQHDI
Trigger: TATGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTGGCTGCACTACTTTAGAGACTGGCTTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGCGTGATAAGTTCCCCTaGTTTGTAGCACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWRDKFP*FVAQMF
Trigger: GAACATTTGTGCTACAAATCAGGGGAACTTATCACG...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR TCA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAAATCAAGAGGTTTGGTTaGATTTTTGTTAGGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GIFLLSQTSHWMDANSGEIKRFG*IFVRGC
Trigger: ACAGCCCCTAACAAAAATTCAACCAAACCTCTTGAT...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTAAGGGAAGCACCTTTTaGGTGGAGTTTGGGGCGACA +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLKGSTF*VEFGAT
Trigger: TGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTT...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGTTGCTAGGGCCAGAATaGCCTTCAGTAGAAATTTCA +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWLLGPE*PSVEIS
Trigger: TGAAATTTCTACTGAAGGGCATTCTGGCCCTAGCAA...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGTTGGGAGTCATTAACTaGAACATGGTTTGCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLLGVIN*NMVCRA
Trigger: CGCCCTGCAAACCATGTTCCAGTTAATGACTCCCAA...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 72 bp CCAGTCTCTAAAGTAGTGCAGCCACATTTGGGGAAGTaGCTTGTTCTCCTCCAGCATGACATACTTCACATT +
Preference number: 4 (lower is better)
Translates to: PVSKVVQPHLGK*LVLLQHDILHI
Trigger: AATGTGAAGTATGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTGGCTGCACTACTTTAGAGACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PYMLLRGGIFLLSQTSHWVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...CCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GTAGTCTGCTTTCTGGGTGACTATATACATGTTGTAGAAAGAGAAGTACTTGAACCAGGGTCGTGGTTGTaGAGGGAAGCACCTTTTGAG +
Preference number: 4 (lower is better)
Translates to: VVCFLGDYIHVVEREVLEPGSWL*REAPFE
Trigger: CTCAAAAGGTGCTTCCCTTCACAACCACGACCCTGG...TTCAAGTACTTCTCTTTCTACAACATGTATATAGTCACCCAGAAAGCAGACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDASLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACCCAGTCACTGTCAAATaGATCCTGAAGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDPVTVK*ILKSLK
Trigger: CTTCAAGGACTTCAGGATGCATTTGACAGTGACTGG...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCCTCTGTGTAGGCCTGTaGCTCAACTTGAATCACCCT +
Preference number: 4 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSLCVGL*LNLNHP
Trigger: AGGGTGATTCAAGTTGAGCCACAGGCCTACACAGAG...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACTCTCAGCCTGGTCTCTaGCATGTAGTCGGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNSQPGL*HVVGFV
Trigger: GACAAAGCCGACTACATGCCAGAGACCAGGCTGAGA...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGTTAAATAAGAGTCTCTaGAACTTCGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLLNKSL*NFALSH
Trigger: GTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAA...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATCGTGATAAGTTCCCCTaGTTTGTAGCACAAATGTTC +
Preference number: 4 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHRDKFP*FVAQMF
Trigger: GAACATTTGTGCTACAAATCAGGGGAACTTATCACG...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR GCA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTAACAATCAACTCCTCCTaGCAATGCATATACTTCCTG +
Preference number: 4 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLTINSS*QCIYFL
Trigger: CAGGAAGTATATGCATTGGCAGGAGGAGTTGATTGT...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR GCA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTAATTAATGATGCCATCTaGGTCTACCAGACGCTGTTT +
Preference number: 4 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLINDAI*VYQTLF
Trigger: AAACAGCGTCTGGTAGACGCAGATGGCATCATTAAT...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACTCCGATGCCAACAGATaGAATCAGGATGACCACAGG +
Preference number: 4 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNSDANR*NQDDHR
Trigger: CCTGTGGTCATCCTGATTGCATCTGTTGGCATCGGA...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR TCA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACGTCTGTATCATGAGTTaGGGATTAAACATAGCCTCT +
Preference number: 4 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDVCIMS*GLNIAS
Trigger: AGAGGCTATGTTTAATCCTCAACTCATGATACAGAC...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATTTCCTGGATAAACCTTaGCATCCACCATTCAAAACA +
Preference number: 4 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHFLDKP*HPPFKT
Trigger: TGTTTTGAATGGTGGATGTCAAGGTTTATCCAGGAA...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
3UTR CAA 72 bp GAACAGCTCCCCTACAATGCCATGTCTACGCATGTTTaGACATTAGATGAAAGGAGAGAGAATCCCTATAAA +
Preference number: 4 (lower is better)
Translates to: EQLPYNAMSTHV*TLDERRENPYK
Trigger: TTTATAGGGATTCTCTCTCCTTTCATCTAATGTCAAAACATGCGTAGACATGGCATTGTAGGGGAGCTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCTTAAATAAGAGTCTCTaGAACTTCGCTCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSLNKSL*NFALSH
Trigger: GTGGCTGAGAGCGAAGTTTCAGAGACTCTTATTTAA...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp ACAACAACAAACCACAATACAGTACATTGGAAAGTCACATGCACACACACATCCTATAATTGTTTGGCATaGTCCTCCCAGTTTCCCAGT +
Preference number: 4 (lower is better)
Translates to: TTTNHNTVHWKVTCTHTSYNCLA*SSQFPS
Trigger: ACTGGGAAACTGGGAGGATCATGCCAAACAATTATA...GGATGTGTGTGTGCATGTGACTTTCCAATGTACTGTATTGTGGTTTGTTGTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTAGCGCCTTCTTCTTTTaGAGTCTGTATCATGAGTTG +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLSAFFF*SLYHEL
Trigger: CAACTCATGATACAGACTCCAAAAGAAGAAGGCGCT...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTAGTTCATACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLVHTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTATGAAC...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTTTCCTGGATAAACCTTaGCATCCACCATTCAAAACA +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLFLDKP*HPPFKT
Trigger: TGTTTTGAATGGTGGATGTCAAGGTTTATCCAGGAA...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR TCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTAGTCTGCTTTCTGGGTaGCTATATACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLSLLSG*LYTCCR
Trigger: TCTACAACATGTATATAGTCACCCAGAAAGCAGACT...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR GCA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTGATATTCGGGTAGTCTaGTTTCTGGGTGACTATATA +
Preference number: 4 (lower is better)
Translates to: APGNRLYSISMYITCVHLDIRVV*FLGDYI
Trigger: TATATAGTCACCCAGAAAGCAGACTACCCGAATATC...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
3UTR CAA 72 bp AGCCAAGAGACGACACCTATTCAGTCTCATTTGGCATaGGGCATTGATATCATTAAGACAAAGCTAGTATCT +
Preference number: 4 (lower is better)
Translates to: SQETTPIQSHLA*GIDIIKTKLVS
Trigger: AGATACTAGCTTTGTCTTAATGATATCAATGCCCAATGCCAAATGAGACTGAATAGGTGTCGTCTCTTGGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR CCA 90 bp GTAGTCTGCTTTCTGGGTGACTATATACATGTTGTAGAAAGAGAAGTACTTGAAGTTCATACATTTGCTTaGGAGTCATTAACTGGAACA +
Preference number: 4 (lower is better)
Translates to: VVCFLGDYIHVVEREVLEVHTFA*ESLTGT
Trigger: TGTTCCAGTTAATGACTCCCAAGCAAATGTATGAAC...TTCAAGTACTTCTCTTTCTACAACATGTATATAGTCACCCAGAAAGCAGACTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CCA 90 bp TCCCCTTGGAAATCTGCTCCAGAGCGAAGGCGGCGTCGCAGTAGCTaGGCCGGTGCAGATAGTCCCGGTCCGGCGCGGCGCGGTGCGGTC +
Preference number: 5 (lower is better)
Translates to: SPWKSAPERRRRRSS*AGADSPGPARRGAV
Trigger: GACCGCACCGCGCCGCGCCGGACCGGGACTATCTGCACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTTCCAAGGGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR CAA 90 bp CTCAGAGCGTGGCTCGGCGGTGGTGTAGTACACGTGCGTGTGAGGGTCATACTCTCTGGGTCGGCTGGGTaGAGGCAAGGCCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: LRAWLGGGVVHVRVRVILSGSAG*RQGRSM
Trigger: CATGGACCGGCCTTGCCTCAACCCAGCCGACCCAGA...GAGTATGACCCTCACACGCACGTGTACTACACCACCGCCGAGCCACGCTCTGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACTCCCGGACTGTAGCTTaGCCCCTTCCCAGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHSRTVA*PLPRSS
Trigger: ACTGCTTCTGGGAAGGGGCAAAGCTACAGTCCGGGA...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp TTGGCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCCTGGCTCCGGTGCGCTaGAGGCACTCCCCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: LAGDTSGHGPKKDKRTGSLAPVR*RHSPVL
Trigger: CAGGACTGGGGAGTGCCTCAAGCGCACCGGAGCCAG...GCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS TCA 90 bp AAAAGAAATGCCAATCAAGGAGCAGAGGCCCAATCCTGCAGCCACTaGCAGCGCAACCAACAGGACGCCAGCCAGCCCCACGGCACCCTG +
Preference number: 5 (lower is better)
Translates to: KRNANQGAEAQSCSH*QRNQQDASQPHGTL
Trigger: CAGGGTGCCGTGGGGCTGGCTGGCGTCCTGTTGGTTGCGCTGTCAGTGGCTGCAGGATTGGGCCTCTGCTCCTTGATTGGCATTTCTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCAGATCTGGGTCGGCTGGGTaGAGGCAAGGCCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: AGDTSGHGPKKDKRTGSRSGSAG*RQGRSM
Trigger: CATGGACCGGCCTTGCCTCAACCCAGCCGACCCAGA...TCTGCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGTCGAGGCTGCTGGCCTaGCCGTCCAGGGGACAAGGA +
Preference number: 5 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRSRLLA*PSRGQG
Trigger: TCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTCGA...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTCTGGCTCCGGTGCGCTaGAGGCACTCCCCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGLAPVR*RHSPVL
Trigger: CAGGACTGGGGAGTGCCTCAAGCGCACCGGAGCCAG...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCGTCCAGGTGGGGCTGTaGCCGAGGGGTCAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSVQVGL*PRGQGR
Trigger: CCTCCCTTGACCCCTCGGCAACAGCCCCACCTGGAC...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACTCTGGGTCGGCTGGGTaGAGGCAAGGCCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYSGSAG*RQGRSM
Trigger: CATGGACCGGCCTTGCCTCAACCCAGCCGACCCAGA...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CCAGTGGCGCAGGCTGATGTATTGCTCCCAGAACAGGAAGGGGTAGCCATTGGGGAAGGGAAGCACCTTTaGAGTGGAGTTTGGGGCGAC +
Preference number: 5 (lower is better)
Translates to: PVAQADVLLPEQEGVAIGEGKHL*SGVWGD
Trigger: GTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTTC...CCCAATGGCTACCCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCGCCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCAAGAAGGCGGTGACATaGCTGATGGAGGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GVTFPPASRQKKTWTFPAKKAVT*LMEVRA
Trigger: GGCCCTCACCTCCATCAGCAATGTCACCGCCTTCTT...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp AGACAGAGACACACACTCTCTGACTTTAGTCTCCTGCCAGCTCTGTGTCCTTCCTCGAGGCTGCTGGCCTaGCCGTCCAGGGGACAAGGA +
Preference number: 5 (lower is better)
Translates to: RQRHTLSDFSLLPALCPSSRLLA*PSRGQG
Trigger: TCCTTGTCCCCTGGACGGCAAGGCCAGCAGCCTCGA...GGAAGGACACAGAGCTGGCAGGAGACTAAAGTCAGAGAGTGTGTGTCTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGCCATGGCGGTGGACGTaGGGTTCCGAGGGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVPWRWT*GSEGCE
Trigger: CTCACAACCCTCGGAACCCAACGTCCACCGCCATGG...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS GCA 90 bp AACCACCTCCACGTAAGTCCTCTGCCAGGCCTCCAGGATGGCGGCTaGCCTGTCTTCATTCCAGTTGATGTGAGAGACATAGTCGTAGCC +
Preference number: 5 (lower is better)
Translates to: NHLHVSPLPGLQDGG*PVFIPVDVRDIVVA
Trigger: GGCTACGACTATGTCTCTCACATCAACTGGAATGAAGACAGGGCAGCCGCCATCCTGGAGGCCTGGCAGAGGACTTACGTGGAGGTGGTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CCA 90 bp CAATCTGGGTCGGCTGGGTTGAGGCAAGGCCGGTCCATGTACCCATaGCCAACTTCGGCTTTATTCAGCATTTCCTCCCAGCTGTCCACT +
Preference number: 5 (lower is better)
Translates to: QSGSAGLRQGRSMYP*PTSALFSISSQLST
Trigger: AGTGGACAGCTGGGAGGAAATGCTGAATAAAGCCGAAGTTGGCCATGGGTACATGGACCGGCCTTGCCTCAACCCAGCCGACCCAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
ENSMUST00000195756.6
CDS-3UTR CAA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCGAAGGGAAGCACCTTTaGAGTGGAGTTTGGGGCGAC +
Preference number: 5 (lower is better)
Translates to: GVTFPPASRQKKTWTFPAEGKHL*SGVWGD
Trigger: GTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTTC...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGGCGCAGGCTGATGTATaGCTCCCAGAACAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRAQADV*LPEQEG
Trigger: CCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCGC...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp GGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACCATGGCGGTGGACGTaGGGTTCCGAGGGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: GTHDDAQKPRGCTNFLLPPWRWT*GSEGCE
Trigger: CTCACAACCCTCGGAACCCAACGTCCACCGCCATGG...TGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATGAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGGGCTTCCACAATCACTaGGTGGGCAGGGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHEGFHNH*VGRASG
Trigger: GCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCC...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACCCTGAGCGGTCCCTATaGCTAGGGCCAGAATGCCCT +
Preference number: 5 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYPERSL*LGPECP
Trigger: AGGGCATTCTGGCCCTAGCAATAGGGACCGCTCAGG...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS CCA 90 bp GTCCAGGGTCGTGGTTGTGAAGGGAAGCACCTTTTGAGTGGAGTTTaGGGCGACACTTTGATGAACCACCTCCACGTAAGTCCTCTGCCA +
Preference number: 5 (lower is better)
Translates to: VQGRGCEGKHLLSGV*GDTLMNHLHVSPLP
Trigger: TGGCAGAGGACTTACGTGGAGGTGGTTCATCAAAGTGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTTCACAACCACGACCCTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCCCAGTAGCCTTCCCCTaGGAAATCTGCTCCAGAGCG +
Preference number: 5 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTPVAFP*EICSRA
Trigger: CGCTCTGGAGCAGATTTCCAAGGGGAAGGCTACTGG...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR CAA 90 bp GGTCCCCCAGGGTCTAGTTTGGGCCACCGCTCAGATGGCCCTTGGAAGCACCACAGTCTGTATCATGAGTaGAGGATTAAACATAGCCTC +
Preference number: 5 (lower is better)
Translates to: GPPGSSLGHRSDGPWKHHSLYHE*RIKHSL
Trigger: GAGGCTATGTTTAATCCTCAACTCATGATACAGACT...GTGGTGCTTCCAAGGGCCATCTGAGCGGTGGCCCAAACTAGACCCTGGGGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACCTGGCTCCGGTGCGCTaGAGGCACTCCCCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDLAPVR*RHSPVL
Trigger: CAGGACTGGGGAGTGCCTCAAGCGCACCGGAGCCAG...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTCTAATGTCGATGGGCTaGTCTCGGCTGCCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGLMSMG*SRLPVC
Trigger: GCAGACTGGCAGCCGAGACAAGCCCATCGACATTAG...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATGTCCAGGTGGGGCTGTaGCCGAGGGGTCAAGGGAGG +
Preference number: 5 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHVQVGL*PRGQGR
Trigger: CCTCCCTTGACCCCTCGGCAACAGCCCCACCTGGAC...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS TCA 90 bp TTGCCTGTTATACATGTAGACGTGCACACGACTGGCCTGGAGTGCTaGGTCCAGGTGTTGCAGGAGAGCCTCTGTGGTCAGAACATTAGC +
Preference number: 5 (lower is better)
Translates to: LPVIHVDVHTTGLEC*VQVLQESLCGQNIS
Trigger: GCTAATGTTCTGACCACAGAGGCTCTCCTGCAACACCTGGACTCAGCACTCCAGGCCAGTCGTGTGCACGTCTACATGTATAACAGGCAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195756.6
CDS TCA 90 bp ACCTCTGTTATACATGTAGACGTGCACACGACTGGCCTGGAGTGCTaGGTCCAGGTGTTGCAGGAGAGCCTCTGTGGTCAGAACATTAGC +
Preference number: 5 (lower is better)
Translates to: TSVIHVDVHTTGLEC*VQVLQESLCGQNIS
Trigger: GCTAATGTTCTGACCACAGAGGCTCTCCTGCAACACCTGGACTCAGCACTCCAGGCCAGTCGTGTGCACGTCTACATGTATAACAGAGGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTCCCGGACTGTAGCTTaGCCCCTTCCCAGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCSRTVA*PLPRSS
Trigger: ACTGCTTCTGGGAAGGGGCAAAGCTACAGTCCGGGA...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp CCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACAAGGCTCAGGCATGAGGTTTCCAGTGGCATTCTaGACGGTACCACCCACAATC +
Preference number: 5 (lower is better)
Translates to: PRGCTNFLLPHAQGSGMRFPVAF*TVPPTI
Trigger: GATTGTGGGTGGTACCGTCAAGAATGCCACTGGAAA...CCTCATGCCTGAGCCTTGTGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GCTGGAGACACCTCAGGACACGGTCCAAAGAAGGATAAGAGGACAGGCAGCAGATTTCCAGTGGCATTCTaGACGGTACCACCCACAATC +
Preference number: 5 (lower is better)
Translates to: AGDTSGHGPKKDKRTGSRFPVAF*TVPPTI
Trigger: GATTGTGGGTGGTACCGTCAAGAATGCCACTGGAAA...TCTGCTGCCTGTCCTCTTATCCTTCTTTGGACCGTGTCCTGAGGTGTCTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCAAGAAGGCGGTGACATaGCTGATGGAGGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCKKAVT*LMEVRA
Trigger: GGCCCTCACCTCCATCAGCAATGTCACCGCCTTCTT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAAGGCACAGCACTCAGCTaGATCCCAATGAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: GIFLLSQTSHWMDANSGEGTALS*IPMRPI
Trigger: GATGGGCCTCATTGGGATCAAGCTGAGTGCTGTGCC...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp TGCAAGCATCAGTACACCCAGCAGAGTGGACACAGCACCGTCCAGAACGGGAGCCTTGCCGCAGTTCTTTaGAATGTAACAACCCAGTTT +
Preference number: 5 (lower is better)
Translates to: CKHQYTQQSGHSTVQNGSLAAVL*NVTTQF
Trigger: AAACTGGGTTGTTACATTCAAAAGAACTGCGGCAAG...GCTCCCGTTCTGGACGGTGCTGTGTCCACTCTGCTGGGTGTACTGATGCTTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp ACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCCGAGCAGAGCTGGTGGGTTTGGTTGAATTTTaGTTAGGGGCTGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: TLHLPPQLRVQDIRAELVGLVEF*LGAVAG
Trigger: CCCTGCCACAGCCCCTAACAAAAATTCAACCAAACC...CACCAGCTCTGCTCGGATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CGGGTAGTCTGCTTTCTGGGTGACTATATACATGTTGTAGAAAGAGAAGTACTTCTGGCTCCGGTGCGCTaGAGGCACTCCCCAGTCCTG +
Preference number: 5 (lower is better)
Translates to: RVVCFLGDYIHVVEREVLLAPVR*RHSPVL
Trigger: CAGGACTGGGGAGTGCCTCAAGCGCACCGGAGCCAG...AAGTACTTCTCTTTCTACAACATGTATATAGTCACCCAGAAAGCAGACTACCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp AGAGAAGTACTTGAACTGGGCAGCTATGAAGTCATATTCTCTGGTTTCCCGGGGAAGAAGGCGGTGACATaGCTGATGGAGGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: REVLELGSYEVIFSGFPGKKAVT*LMEVRA
Trigger: GGCCCTCACCTCCATCAGCAATGTCACCGCCTTCTT...CCCCGGGAAACCAGAGAATATGACTTCATAGCTGCCCAGTTCAAGTACTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGCTAATGTCGATGGGCTaGTCTCGGCTGCCAGTCTGC +
Preference number: 5 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHELMSMG*SRLPVC
Trigger: GCAGACTGGCAGCCGAGACAAGCCCATCGACATTAG...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp CGCACACGGATATACAGACAGACACAGACACACACACACACGGTAGTCACAGGTATAGCCCTGTGGTTCTaGTCCCCAATGGCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: RTRIYRQTQTHTHTVVTGIALWF*SPMAVR
Trigger: TCTGACAGCCATTGGGGACAAGAACCACAGGGCTAT...ACCTGTGACTACCGTGTGTGTGTGTGTCTGTGTCTGTCTGTATATCCGTGTGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp GGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCTTGCCGCAGTTCTTTaGAATGTAACAACCCAGTTT +
Preference number: 5 (lower is better)
Translates to: GVTFPPASRQKKTWTFPALAAVL*NVTTQF
Trigger: AAACTGGGTTGTTACATTCAAAAGAACTGCGGCAAG...GGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAATCCCGGACTGTAGCTTaGCCCCTTCCCAGAAGCAGT +
Preference number: 5 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQSRTVA*PLPRSS
Trigger: ACTGCTTCTGGGAAGGGGCAAAGCTACAGTCCGGGA...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp GAAAGGGAACTGAGCGTACTCGATGGGCTCTGCTGCTGGGATTCTCAGCCTGGTAGAACCATAGCAAAATaGAATACCACCACCACAGCA +
Preference number: 5 (lower is better)
Translates to: ERELSVLDGLCCWDSQPGRTIAK*NTTTTA
Trigger: TGCTGTGGTGGTGGTATTCAATTTTGCTATGGTTCT...ACCAGGCTGAGAATCCCAGCAGCAGAGCCCATCGAGTACGCTCAGTTCCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCCCACATTTGGGGAAGTaGCTTGTTCTCCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTPHLGK*LVLLQH
Trigger: ATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTGG...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTGGCTTCCACAATCACTaGGTGGGCAGGGCCTCCGGC +
Preference number: 5 (lower is better)
Translates to: APGNRLYSISMYITCVHLGFHNH*VGRASG
Trigger: GCCGGAGGCCCTGCCCACCAAGTGATTGTGGAAGCC...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATCCTGAGCGGTCCCTATaGCTAGGGCCAGAATGCCCT +
Preference number: 5 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHPERSL*LGPECP
Trigger: AGGGCATTCTGGCCCTAGCAATAGGGACCGCTCAGG...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp GGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCTTCCCAGCCCATGTTCCAACTTCCATaGCCTGTTATACATGTAGAC +
Preference number: 5 (lower is better)
Translates to: GSPFHQHHDRKRPGPSQPMFQLP*PVIHVD
Trigger: GTCTACATGTATAACAGGCAATGGAAGTTGGAACAT...GGGCTGGGAAGGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACTCTGGGTCGGCTGGGTaGAGGCAAGGCCGGTCCATG +
Preference number: 5 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNSGSAG*RQGRSM
Trigger: CATGGACCGGCCTTGCCTCAACCCAGCCGACCCAGA...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GTCCTTCCTGCCTTGGCTGATGGGACTCATGATGATGCACAGAAGCCGAGAGGCTGTTCATACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: VLPALADGTHDDAQKPRGCSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTATGAACA...GCCTCTCGGCTTCTGTGCATCATCATGAGTCCCATCAGCCAAGGCAGGAAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GTTGCTGACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAGAAGGGAAGCACCTTTaGAGTGGAGTTTGGGGCGAC +
Preference number: 5 (lower is better)
Translates to: VADQRQRNPNLGEGEHNQEGKHL*SGVWGD
Trigger: GTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTTC...TTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTCAGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GACCAGAGACAAAGAAACCCAAACCTTGGGGAAGGAGAACACAATCAAACTCTAAAGAAGGCGGTGACATaGCTGATGGAGGTGAGGGCC +
Preference number: 5 (lower is better)
Translates to: DQRQRNPNLGEGEHNQTLKKAVT*LMEVRA
Trigger: GGCCCTCACCTCCATCAGCAATGTCACCGCCTTCTT...TAGAGTTTGATTGTGTTCTCCTTCCCCAAGGTTTGGGTTTCTTTGTCTCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CATGATGATGCACAGAAGCCGAGAGGCTGTACAAACTTCCTTCTGCCACATGCACCACATTTGGGGAAGTaGCTTGTTCTCCTCCAGCAT +
Preference number: 5 (lower is better)
Translates to: HDDAQKPRGCTNFLLPHAPHLGK*LVLLQH
Trigger: ATGCTGGAGGAGAACAAGCAACTTCCCCAAATGTGG...TGCATGTGGCAGAAGGAAGTTTGTACAGCCTCTCGGCTTCTGTGCATCATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGGTTTGGTTGAATTTTaGTTAGGGGCTGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDAGLVEF*LGAVAG
Trigger: CCCTGCCACAGCCCCTAACAAAAATTCAACCAAACC...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGCTGAAGGGAAGCACCTTTaGAGTGGAGTTTGGGGCGAC +
Preference number: 5 (lower is better)
Translates to: AHVYSPNTVKTYSLLSLAEGKHL*SGVWGD
Trigger: GTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTTC...AGCAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCATTTGGGGAAGTTGCTaGTTCTCCTCCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCIWGSC*FSSSMT
Trigger: TGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAAT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS TCA 90 bp CAGTCCTGTCCTCAAATGGAATCCTCTTATTCTGTCCTGTTTCACTaGATGCATGGGCCAGGAGGAAGACATCATCCACACCAACACCAA +
Preference number: 5 (lower is better)
Translates to: QSCPQMESSYSVLFH*MHGPGGRHHPHQHQ
Trigger: TTGGTGTTGGTGTGGATGATGTCTTCCTCCTGGCCCATGCATTCAGTGAAACAGGACAGAATAAGAGGATTCCATTTGAGGACAGGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CAGATGATTGGGGTCACCTTTCCACCAGCATCACGACAGAAAAAGACCTGGACCCTTGCCGCAGTTCTTTaGAATGTAACAACCCAGTTT +
Preference number: 5 (lower is better)
Translates to: QMIGVTFPPASRQKKTWTLAAVL*NVTTQF
Trigger: AAACTGGGTTGTTACATTCAAAAGAACTGCGGCAAG...GGTCCAGGTCTTTTTCTGTCGTGATGCTGGTGGAAAGGTGACCCCAATCATCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CAAGGTGGCTTCCGCACTCTACATCTCCCTCCTCAACTCAGGGTGCAAGATATCTGTTCATACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: QGGFRTLHLPPQLRVQDICSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTATGAACA...GATATCTTGCACCCTGAGTTGAGGAGGGAGATGTAGAGTGCGGAAGCCACCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAACAGTGGGGAATGCATCCTGAAGTCCTaGAAGCCAGTCTCTAAAGTA +
Preference number: 5 (lower is better)
Translates to: GIFLLSQTSHWMDANSGECILKS*KPVSKV
Trigger: TACTTTAGAGACTGGCTTCAAGGACTTCAGGATGCA...TTCCCCACTGTTAGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTGCATCCTGAAGTCCTaGAAGCCAGTCTCTAAAGTA +
Preference number: 5 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCCILKS*KPVSKV
Trigger: TACTTTAGAGACTGGCTTCAAGGACTTCAGGATGCA...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTGGCACAGCACTCAGCTaGATCCCAATGAGGCCCATC +
Preference number: 5 (lower is better)
Translates to: APGNRLYSISMYITCVHLGTALS*IPMRPI
Trigger: GATGGGCCTCATTGGGATCAAGCTGAGTGCTGTGCC...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS CCA 90 bp CGGTACCACCCACAATCAACTCCTCCTGCCAATGCATATACTTCCTaGATAAACCTTGACATCCACCATTCAAAACAAGGGCCACATCAA +
Preference number: 5 (lower is better)
Translates to: RYHPQSTPPANAYTS*INLDIHHSKQGPHQ
Trigger: TTGATGTGGCCCTTGTTTTGAATGGTGGATGTCAAGGTTTATCCAGGAAGTATATGCATTGGCAGGAGGAGTTGATTGTGGGTGGTACCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CCA 90 bp TCCTCAAATGGAATCCTCTTATTCTGTCCTGTTTCACTGAATGCATaGGCCAGGAGGAAGACATCATCCACACCAACACCAAGAGCAAGA +
Preference number: 5 (lower is better)
Translates to: SSNGILLFCPVSLNA*ARRKTSSTPTPRAR
Trigger: TCTTGCTCTTGGTGTTGGTGTGGATGATGTCTTCCTCCTGGCCCATGCATTCAGTGAAACAGGACAGAATAAGAGGATTCCATTTGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGGGTTTGGTTGAATTTTaGTTAGGGGCTGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLGLVEF*LGAVAG
Trigger: CCCTGCCACAGCCCCTAACAAAAATTCAACCAAACC...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp TACTCTCTTCTCTCCCTTGCTGTCATTTATAACGAAACGTGTCCTCACACCCATGGTTTGGTTGAATTTTaGTTAGGGGCTGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: YSLLSLAVIYNETCPHTHGLVEF*LGAVAG
Trigger: CCCTGCCACAGCCCCTAACAAAAATTCAACCAAACC...ATGGGTGTGAGGACACGTTTCGTTATAAATGACAGCAAGGGAGAGAAGAGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp AAAGAGCTTACCCTATATGCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACTTTCCAGTGGCATTCTaGACGGTACCACCCACAATC +
Preference number: 5 (lower is better)
Translates to: KELTLYAFTRWHLPAFTDFPVAF*TVPPTI
Trigger: GATTGTGGGTGGTACCGTCAAGAATGCCACTGGAAA...GTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGCATATAGGGTAAGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp ACAGAAAAAGACCTGGACCTTCCCAGCCCACCTAGGCCAGAGCTAAGATCATACTGTTCATACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: TEKDLDLPSPPRPELRSYCSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTATGAACA...GTATGATCTTAGCTCTGGCCTAGGTGGGCTGGGAAGGTCCAGGTCTTTTTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp ATTATGGTCACTACCACACTGAACTGTGAGCCTTACACAGCACAGCTCTTTACTACCACAACCTTGGCTTaGGGTTTCAGGAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: IMVTTTLNCEPYTAQLFTTTTLA*GFRRKG
Trigger: TCCTTTCCTCCTGAAACCCAAAGCCAAGGTTGTGGT...AGTAAAGAGCTGTGCTGTGTAAGGCTCACAGTTCAGTGTGGTAGTGACCATAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR CAA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACGCGCAGGCTGATGTATaGCTCCCAGAACAGGAAGGG +
Preference number: 5 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNAQADV*LPEQEG
Trigger: CCCTTCCTGTTCTGGGAGCAATACATCAGCCTGCGC...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS TCA 90 bp AAGACATCATCCACACCAACACCAAGAGCAAGAAACGGCAAAACCTaGGTTGTCGCAGCATTAAAAGAAATGCCAATCAAGGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KTSSTPTPRARNGKT*VVAALKEMPIKEQR
Trigger: CCTCTGCTCCTTGATTGGCATTTCTTTTAATGCTGCGACAACTCAGGTTTTGCCGTTTCTTGCTCTTGGTGTTGGTGTGGATGATGTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CCA 90 bp TTGCAGGAGAGCCTCTGTGGTCAGAACATTAGCGCCTTCTTCTTTTaGAGTCTGTATCATGAGTTGAGGATTAAACATAGCCTCTTCTCC +
Preference number: 5 (lower is better)
Translates to: LQESLCGQNISAFFF*SLYHELRIKHSLFS
Trigger: GGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACTCCAAAAGAAGAAGGCGCTAATGTTCTGACCACAGAGGCTCTCCTGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp GCTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCATGTTCCAACTTCCATaGCCTGTTATACATGTAGAC +
Preference number: 5 (lower is better)
Translates to: AFTRWHLPAFTDITLDGCMFQLP*PVIHVD
Trigger: GTCTACATGTATAACAGGCAATGGAAGTTGGAACAT...GCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp CTTTTACGAGGTGGCATCTTCCTGCTTTCACAGACATCACACTGGATGGATGCTAGAACCATAGCAAAATaGAATACCACCACCACAGCA +
Preference number: 5 (lower is better)
Translates to: LLRGGIFLLSQTSHWMDARTIAK*NTTTTA
Trigger: TGCTGTGGTGGTGGTATTCAATTTTGCTATGGTTCT...AGCATCCATCCAGTGTGATGTCTGTGAAAGCAGGAAGATGCCACCTCGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp ATTATGGTCACTACCACACTGAACTGTGAGCCTTACACAGCACAGCTCTTTACTATTTGGGGAAGTTGCTaGTTCTCCTCCAGCATGACA +
Preference number: 5 (lower is better)
Translates to: IMVTTTLNCEPYTAQLFTIWGSC*FSSSMT
Trigger: TGTCATGCTGGAGGAGAACAAGCAACTTCCCCAAAT...AGTAAAGAGCTGTGCTGTGTAAGGCTCACAGTTCAGTGTGGTAGTGACCATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS-3UTR CAA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTATAGCCCTGTGGTTCTaGTCCCCAATGGCTGTCAGA +
Preference number: 5 (lower is better)
Translates to: APGNRLYSISMYITCVHLIALWF*SPMAVR
Trigger: TCTGACAGCCATTGGGGACAAGAACCACAGGGCTAT...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp ATTCAGGGAAGCTGCATGCAGACAGAGTACATTCCTCACAACAGCTTCCATGAGATGTTCCAACTTCCATaGCCTGTTATACATGTAGAC +
Preference number: 5 (lower is better)
Translates to: IQGSCMQTEYIPHNSFHEMFQLP*PVIHVD
Trigger: GTCTACATGTATAACAGGCAATGGAAGTTGGAACAT...CTCATGGAAGCTGTTGTGAGGAATGTACTCTGTCTGCATGCAGCTTCCCTGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS-3UTR CAA 90 bp GCCCCAGGAAATAGACTGTACAGCATTTCCATGTATATTACATGTGTACACCTTGTAGTGCAGCCACATTaGGGGAAGTTGCTTGTTCTC +
Preference number: 5 (lower is better)
Translates to: APGNRLYSISMYITCVHLVVQPH*GKLLVL
Trigger: GAGAACAAGCAACTTCCCCAAATGTGGCTGCACTAC...AAGGTGTACACATGTAATATACATGGAAATGCTGTACAGTCTATTTCCTGGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS TCA 90 bp ACAATCAACTCCTCCTGCCAATGCATATACTTCCTGGATAAACCTTaGCATCCACCATTCAAAACAAGGGCCACATCAAGAGGTTTGGTT +
Preference number: 5 (lower is better)
Translates to: TINSSCQCIYFLDKP*HPPFKTRATSRGLV
Trigger: AACCAAACCTCTTGATGTGGCCCTTGTTTTGAATGGTGGATGTCAAGGTTTATCCAGGAAGTATATGCATTGGCAGGAGGAGTTGATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACTTTCCAGTGGCATTCTaGACGGTACCACCCACAATC +
Preference number: 5 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNFPVAF*TVPPTI
Trigger: GATTGTGGGTGGTACCGTCAAGAATGCCACTGGAAA...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACACCACAACCTTGGCTTaGGGTTTCAGGAGGAAAGGA +
Preference number: 5 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNTTTLA*GFRRKG
Trigger: TCCTTTCCTCCTGAAACCCAAAGCCAAGGTTGTGGT...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
CDS-3UTR CAA 90 bp CTGCTCACGTGTACTCTCCTAACACTGTTAAAACATACTCTCTTCTCTCCCTTGTGTTCATACATTTGCTaGGGAGTCATTAACTGGAAC +
Preference number: 5 (lower is better)
Translates to: LLTCTLLTLLKHTLFSPLCSYIC*GVINWN
Trigger: GTTCCAGTTAATGACTCCCAAGCAAATGTATGAACA...CAAGGGAGAGAAGAGAGTATGTTTTAACAGTGTTAGGAGAGTACACGTGAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS-3UTR CAA 90 bp TGTCTGCTCGTTAAACAATTACCACGCATAGCGTGTTCAAAAGTTAACAGTAACAGAACCATAGCAAAATaGAATACCACCACCACAGCA +
Preference number: 5 (lower is better)
Translates to: CLLVKQLPRIACSKVNSNRTIAK*NTTTTA
Trigger: TGCTGTGGTGGTGGTATTCAATTTTGCTATGGTTCT...GTTACTGTTAACTTTTGAACACGCTATGCGTGGTAATTGTTTAACGAGCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS TCA 90 bp TTCTATTATCTGATCCATGTAACCTGTCTCCGTGATAAGTTCCCCTaGTTTGTAGCACAAATGTTCCAACTTCCATTGCCTGTTATACAT +
Preference number: 5 (lower is better)
Translates to: FYYLIHVTCLRDKFP*FVAQMFQLPLPVIH
Trigger: ATGTATAACAGGCAATGGAAGTTGGAACATTTGTGCTACAAATCAGGGGAACTTATCACGGAGACAGGTTACATGGATCAGATAATAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195756.6
CDS CCA 72 bp AAATCTGCTCCAGAGCGAAGGCGGCGTCGCAGTAGCTaGGCCGGTGCAGATAGTCCCGGTCCGGCGCGGCGC +
Preference number: 6 (lower is better)
Translates to: KSAPERRRRRSS*AGADSPGPARR
Trigger: GCGCCGCGCCGGACCGGGACTATCTGCACCGGCCCAGCTACTGCGACGCCGCCTTCGCTCTGGAGCAGATTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021921.11
CDS GCA 72 bp CCCGGCGCGCGGGGCCGCCGCAGGCTTTCGGCGGAGTaGGGCGCGGACTCACAATTACAAGCCTGTTTCTAT +
Preference number: 6 (lower is better)
Translates to: PGARGRRRLSAE*GADSQLQACFY
Trigger: ATAGAAACAGGCTTGTAATTGTGAGTCCGCGCCGCACTCCGCCGAAAGCCTGCGGCGGCCCCGCGCGCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195106.2
CDS TCA 72 bp GCCAATCAAGGAGCAGAGGCCCAATCCTGCAGCCACTaGCAGCGCAACCAACAGGACGCCAGCCAGCCCCAC +
Preference number: 6 (lower is better)
Translates to: ANQGAEAQSCSH*QRNQQDASQPH
Trigger: GTGGGGCTGGCTGGCGTCCTGTTGGTTGCGCTGTCAGTGGCTGCAGGATTGGGCCTCTGCTCCTTGATTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CCA 72 bp TTTGTTAGGGGCTGTGGCAGGGCAATCTGGGTCGGCTaGGTTGAGGCAAGGCCGGTCCATGTACCCATGGCC +
Preference number: 6 (lower is better)
Translates to: FVRGCGRAIWVG*VEARPVHVPMA
Trigger: GGCCATGGGTACATGGACCGGCCTTGCCTCAACCCAGCCGACCCAGATTGCCCTGCCACAGCCCCTAACAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
ENSMUST00000195756.6
CDS GCA 72 bp GAGGGAGAACGCTCGCAGGGCAGGGATAGGGATCAATaGGGCCATGAAGAAGGCGGTGACATTGCTGATGGA +
Preference number: 6 (lower is better)
Translates to: EGERSQGRDRDQ*GHEEGGDIADG
Trigger: TCCATCAGCAATGTCACCGCCTTCTTCATGGCCGCATTGATCCCTATCCCTGCCCTGCGAGCGTTCTCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CAA 90 bp GAATTTTTGTTAGGGGCTGTGGCAGGGCAATCTGGGTCGGCTGGGTaGAGGCAAGGCCGGTCCATGTACCCATGGCCAACTTCGGCTTTA +
Preference number: 6 (lower is better)
Translates to: EFLLGAVAGQSGSAG*RQGRSMYPWPTSAL
Trigger: TAAAGCCGAAGTTGGCCATGGGTACATGGACCGGCCTTGCCTCAACCCAGCCGACCCAGATTGCCCTGCCACAGCCCCTAACAAAAATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
ENSMUST00000195756.6
CDS TCA 72 bp ATACATGTAGACGTGCACACGACTGGCCTGGAGTGCTaGGTCCAGGTGTTGCAGGAGAGCCTCTGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: IHVDVHTTGLEC*VQVLQESLCGQ
Trigger: CTGACCACAGAGGCTCTCCTGCAACACCTGGACTCAGCACTCCAGGCCAGTCGTGTGCACGTCTACATGTAT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
ENSMUST00000195756.6
CDS CCA 72 bp TCGGCTGGGTTGAGGCAAGGCCGGTCCATGTACCCATaGCCAACTTCGGCTTTATTCAGCATTTCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: SAGLRQGRSMYP*PTSALFSISSQ
Trigger: CTGGGAGGAAATGCTGAATAAAGCCGAAGTTGGCCATGGGTACATGGACCGGCCTTGCCTCAACCCAGCCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
ENSMUST00000195756.6
CDS GCA 72 bp CACGTAAGTCCTCTGCCAGGCCTCCAGGATGGCGGCTaGCCTGTCTTCATTCCAGTTGATGTGAGAGACATA +
Preference number: 6 (lower is better)
Translates to: HVSPLPGLQDGG*PVFIPVDVRDI
Trigger: TATGTCTCTCACATCAACTGGAATGAAGACAGGGCAGCCGCCATCCTGGAGGCCTGGCAGAGGACTTACGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CAA 72 bp GGGAAGCACCTTTTGAGTGGAGTTTGGGGCGACACTTaGATGAACCACCTCCACGTAAGTCCTCTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: GKHLLSGVWGDT*MNHLHVSPLPG
Trigger: GCCTGGCAGAGGACTTACGTGGAGGTGGTTCATCAAAGTGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CAA 72 bp GTCGTCCAGGGTCGTGGTTGTGAAGGGAAGCACCTTTaGAGTGGAGTTTGGGGCGACACTTTGATGAACCAC +
Preference number: 6 (lower is better)
Translates to: VVQGRGCEGKHL*SGVWGDTLMNH
Trigger: GTGGTTCATCAAAGTGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTTCACAACCACGACCCTGGACGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CAA 72 bp GTGATATGGGTTTCGTGGGCGAAGCTGTGGCTCAACTaGAATCACCCTGCTGACACAGGGGCTTGTGAAACA +
Preference number: 6 (lower is better)
Translates to: VIWVSWAKLWLN*NHPADTGACET
Trigger: TGTTTCACAAGCCCCTGTGTCAGCAGGGTGATTCAAGTTGAGCCACAGCTTCGCCCACGAAACCCATATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
CDS CCA 72 bp CGTGGTTGTGAAGGGAAGCACCTTTTGAGTGGAGTTTaGGGCGACACTTTGATGAACCACCTCCACGTAAGT +
Preference number: 6 (lower is better)
Translates to: RGCEGKHLLSGV*GDTLMNHLHVS
Trigger: ACTTACGTGGAGGTGGTTCATCAAAGTGTCGCCCCAAACTCCACTCAAAAGGTGCTTCCCTTCACAACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CAA 90 bp TCCATGCTGAGAATTGCAGGAAAAATGAGCAGAACCATAGCAAAATaGAATACCACCACCACAGCAGCCTGGAGGGAGAACGCTCGCAGG +
Preference number: 6 (lower is better)
Translates to: SMLRIAGKMSRTIAK*NTTTTAAWRENARR
Trigger: CCTGCGAGCGTTCTCCCTCCAGGCTGCTGTGGTGGTGGTATTCAATTTTGCTATGGTTCTGCTCATTTTTCCTGCAATTCTCAGCATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
CDS CAA 90 bp GACTGCATAGTGATATGGGTTTCGTGGGCGAAGCTGTGGCTCAACTaGAATCACCCTGCTGACACAGGGGCTTGTGAAACAGCAGAAAAT +
Preference number: 6 (lower is better)
Translates to: DCIVIWVSWAKLWLN*NHPADTGACETAEN
Trigger: ATTTTCTGCTGTTTCACAAGCCCCTGTGTCAGCAGGGTGATTCAAGTTGAGCCACAGCTTCGCCCACGAAACCCATATCACTATGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000194663.6
CDS TCA 72 bp CTGATCCATGTAACCTGTCTCCGTGATAAGTTCCCCTaGTTTGTAGCACAAATGTTCCAACTTCCATTGCCT +
Preference number: 6 (lower is better)
Translates to: LIHVTCLRDKFP*FVAQMFQLPLP
Trigger: AGGCAATGGAAGTTGGAACATTTGTGCTACAAATCAGGGGAACTTATCACGGAGACAGGTTACATGGATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195756.6
CDS TCA 72 bp TCCTCCTGCCAATGCATATACTTCCTGGATAAACCTTaGCATCCACCATTCAAAACAAGGGCCACATCAAGA +
Preference number: 6 (lower is better)
Translates to: SSCQCIYFLDKP*HPPFKTRATSR
Trigger: TCTTGATGTGGCCCTTGTTTTGAATGGTGGATGTCAAGGTTTATCCAGGAAGTATATGCATTGGCAGGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS TCA 72 bp TCCACACCAACACCAAGAGCAAGAAACGGCAAAACCTaGGTTGTCGCAGCATTAAAAGAAATGCCAATCAAG +
Preference number: 6 (lower is better)
Translates to: STPTPRARNGKT*VVAALKEMPIK
Trigger: CTTGATTGGCATTTCTTTTAATGCTGCGACAACTCAGGTTTTGCCGTTTCTTGCTCTTGGTGTTGGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000194663.6
ENSMUST00000195258.7
CDS CAA 72 bp TCTTTAACTCTTCTAGGAATTCCAAGGGGTCAAAGTTaGTCCACCGTAAAGGAGGCTTACCTAGGAGGTATG +
Preference number: 6 (lower is better)
Translates to: SLTLLGIPRGQS*STVKEAYLGGM
Trigger: CATACCTCCTAGGTAAGCCTCCTTTACGGTGGACAAACTTTGACCCCTTGGAATTCCTAGAAGAGTTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000021921.11
ENSMUST00000192155.6
ENSMUST00000193953.6
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195756.6
CDS CCA 72 bp AGCCTCTGTGGTCAGAACATTAGCGCCTTCTTCTTTTaGAGTCTGTATCATGAGTTGAGGATTAAACATAGC +
Preference number: 6 (lower is better)
Translates to: SLCGQNISAFFF*SLYHELRIKHS
Trigger: GCTATGTTTAATCCTCAACTCATGATACAGACTCCAAAAGAAGAAGGCGCTAATGTTCTGACCACAGAGGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
CDS CAA 90 bp GGTCAGAACATTAGCGCCTTCTTCTTTTGGAGTCTGTATCATGAGTaGAGGATTAAACATAGCCTCTTCTCCTATCTTCTGACGGGTATA +
Preference number: 6 (lower is better)
Translates to: GQNISAFFFWSLYHE*RIKHSLFSYLLTGI
Trigger: TATACCCGTCAGAAGATAGGAGAAGAGGCTATGTTTAATCCTCAACTCATGATACAGACTCCAAAAGAAGAAGGCGCTAATGTTCTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000021921.11
ENSMUST00000194663.6
ENSMUST00000195106.2
ENSMUST00000195258.7
CDS CAA 72 bp TCTTTAACTCTTCTAGGAATTCCAAGGGGTCAAAGTTaGTCCACCGTAAAGGAGGCTTACCTCTGTTATACA +
Preference number: 6 (lower is better)
Translates to: SLTLLGIPRGQS*STVKEAYLCYT
Trigger: TGTATAACAGAGGTAAGCCTCCTTTACGGTGGACAAACTTTGACCCCTTGGAATTCCTAGAAGAGTTAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000195258.7