Pregenerated sensors for PTCD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063884Ensembl transcript IDs: ENSMUST00000082094.5, ENSMUST00000205556.2, ENSMUST00000206284.2, ENSMUST00000206879.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACTCTTTGGGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCACTTaGCAGCTTTACAACCTCAATGGCCAGAGCAGTGCTACCGGATGC | + |
|
Preference number: 1 (lower is better) Translates to: YSLGKALPNRQAEGT*QLYNLNGQSSATGC Trigger: GCATCCGGTAGCACTGCTCTGGCCATTGAGGTTGTAAAGCTGGCAAGTGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCCCAAAGAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CCA 90 bp | GCTTCTTTTTGTTCTGGGTCAACTGTGAAATCCATCACTACTCTTTaGGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCACTTGCCAGC | + |
|
Preference number: 1 (lower is better) Translates to: ASFCSGSTVKSITTL*ARLSPIGKLKALAS Trigger: GCTGGCAAGTGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCCCAAAGAGTAGTGATGGATTTCACAGTTGACCCAGAACAAAAAGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR TCA 90 bp | AACCTGAAGCTGAGAGGCTCTCTGGTGGATGTTTATCCCTGGCCATaGGCATCAATACTTCTTCTCTTAGGGCATCTCGGAAAGTATGAC | + |
|
Preference number: 1 (lower is better) Translates to: NLKLRGSLVDVYPWP*ASILLLLGHLGKYD Trigger: GTCATACTTTCCGAGATGCCCTAAGAGAAGAAGTATTGATGCTCATGGCCAGGGATAAACATCCACCAGAGAGCCTCTCAGCTTCAGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR TCA 90 bp | CCTCAATGGCCAGAGCAGTGCTACCGGATGCTTTCGCTGTGTCCATaGATTCCTCCAGCAATTCATTTCTGGGAATCTTCTTGTGCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: PQWPEQCYRMLSLCP*IPPAIHFWESSCAF Trigger: AAAAGCACAAGAAGATTCCCAGAAATGAATTGCTGGAGGAATTCATGGACACAGCGAAAGCATCCGGTAGCACTGCTCTGGCCATTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CCA 90 bp | GCTACTGTTCAGTTCAGTGAGGTTACCCAGGGCTTCTTTTTGTTCTaGGTCAACTGTGAAATCCATCACTACTCTTTGGGCAAGGCTCTC | + |
|
Preference number: 1 (lower is better) Translates to: ATVQFSEVTQGFFLF*VNCEIHHYSLGKAL Trigger: GAGAGCCTTGCCCAAAGAGTAGTGATGGATTTCACAGTTGACCCAGAACAAAAAGAAGCCCTGGGTAACCTCACTGAACTGAACAGTAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR TCA 90 bp | TGTATCTGTTTATTTTTACCACTTCTAACATTCCAGCAGCTATTGTaGGCCACCTCTCTCTCTCATTTGTCGTCACTGTCACTGTCACTG | + |
|
Preference number: 1 (lower is better) Translates to: CICLFLPLLTFQQLL*ATSLSHLSSLSLSL Trigger: CAGTGACAGTGACAGTGACGACAAATGAGAGAGAGAGGTGGCTCACAATAGCTGCTGGAATGTTAGAAGTGGTAAAAATAAACAGATACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CCA 90 bp | ATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTaGAATTTGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTGTTG | + |
|
Preference number: 1 (lower is better) Translates to: MMGVVGMRPANSVFM*NLFFSKSQTSQCLL Trigger: CAACAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR CCA 90 bp | AGGGTCTTAGGTTTAGGCCAGTACAATACAATACAGAGCTTATATTaGATCCCAGCCCTGTATCTGTTTATTTTTACCACTTCTAACATT | + |
|
Preference number: 1 (lower is better) Translates to: RVLGLGQYNTIQSLY*IPALYLFIFTTSNI Trigger: AATGTTAGAAGTGGTAAAAATAAACAGATACAGGGCTGGGATCCAATATAAGCTCTGTATTGTATTGTACTGGCCTAAACCTAAGACCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCAAAGGACCACACATCACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAAGTCAGACTTCACAATaGTTGTTGCTGTCTTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: AKGPHITEQVGSKGLWVLSQTSQ*LLLSWQ Trigger: TTGCCAAGACAGCAACAAGCATTGTGAAGTCTGACT...TAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR GCA 90 bp | GCCAAAGGACCACACATCACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAAGTAGGAATGAGGCCTaGAAACAGTGTGTTTATGTG | + |
|
Preference number: 2 (lower is better) Translates to: AKGPHITEQVGSKGLWVLSRNEA*KQCVYV Trigger: CACATAAACACACTGTTTGCAGGCCTCATTCCTACT...TAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCACTACTCTTTGGGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCACTTGCCTTTCGCTGTGTCCATaGATTCCTCCAGCAATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: HHYSLGKALPNRQAEGTCLSLCP*IPPAIH Trigger: ATGAATTGCTGGAGGAATTCATGGACACAGCGAAAG...GCAAGTGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCCCAAAGAGTAGTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR CCA 90 bp | CACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTAATACAGAGCTTATATTaGATCCCAGCCCTGTATCTG | + |
|
Preference number: 2 (lower is better) Translates to: HRAGRQQGPVGSNMMGVVIQSLY*IPALYL Trigger: CAGATACAGGGCTGGGATCCAATATAAGCTCTGTAT...TACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR GCA 90 bp | ACTTGCCAGCTTTACAACCTCAATGGCCAGAGCAGTGCTACCGGATGCTTTCGCATTGGCCACATCCAATaGTTGAAGAAGACCTATGAA | + |
|
Preference number: 2 (lower is better) Translates to: TCQLYNLNGQSSATGCFRIGHIQ*LKKTYE Trigger: TTCATAGGTCTTCTTCAAGCATTGGATGTGGCCAAT...GCGAAAGCATCCGGTAGCACTGCTCTGGCCATTGAGGTTGTAAAGCTGGCAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR CCA 90 bp | ATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCGCTTTACAACCTCAATaGCCAGAGCAGTGCTACCGG | + |
|
Preference number: 2 (lower is better) Translates to: MGVVGMRPANSVFMWNLFALQPQ*PEQCYR Trigger: CCGGTAGCACTGCTCTGGCCATTGAGGTTGTAAAGC...GAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTGGTATCCTTCCAAGTaGGTAACACTTCCGGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: MGVVGMRPANSVFMWNLFWYPSK*VTLPET Trigger: GGTCTCCGGAAGTGTTACTCACTTGGAAGGATACCA...GAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CAA 90 bp | AACTCAACAGTAATAACCCATCTCCATGAAAACCAGTTTGAATCCTaGTCTCTAGGCCAAAGGACCACACATCACAGAGCAGGTAGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NSTVITHLHENQFES*SLGQRTTHHRAGRQ Trigger: CTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGCCTAGAGACAAGGATTCAAACTGGTTTTCATGGAGATGGGTTATTACTGTTGAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTGGAATTTGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTGTTGCTGTCTTGGCTGCCGGGCACTCTaGTCTTCGTATGTGGATTTG | + |
|
Preference number: 2 (lower is better) Translates to: CGICSSPKVRLHNACCCLGCRAL*SSYVDL Trigger: CAAATCCACATACGAAGACCAGAGTGCCCGGCAGCC...AAGACAGCAACAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAAATTCCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CAA 90 bp | GCTGTGTCCATGAATTCCTCCAGCAATTCATTTCTGGGAATCTTCTaGTGCTTTTTGAAGAGTTCCAACATTTTCCAGGCTTCCTGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: AVSMNSSSNSFLGIF*CFLKSSNIFQASWL Trigger: AAGCCAGGAAGCCTGGAAAATGTTGGAACTCTTCAAAAAGCACAAGAAGATTCCCAGAAATGAATTGCTGGAGGAATTCATGGACACAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAATCTACCATCATCAAGGTCCTGTGGAGAAAATGTTCTTCCCTCTAATTCATTGGTATCCTTCCAAGTaGGTAACACTTCCGGAGACC | + |
|
Preference number: 2 (lower is better) Translates to: KIYHHQGPVEKMFFPLIHWYPSK*VTLPET Trigger: GGTCTCCGGAAGTGTTACTCACTTGGAAGGATACCA...ATGAATTAGAGGGAAGAACATTTTCTCCACAGGACCTTGATGATGGTAGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000205556.2 ENSMUST00000206879.2 |
||
| 3UTR-3UTR CCA 90 bp | GATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCCAATTCTAGTCTATTaGCCACATCCAATGCTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: DGRSRNEACKQCVYVEFVPILVY*PHPMLE Trigger: TTCAAGCATTGGATGTGGCCAATAGACTAGAATTGG...AACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR GCA 90 bp | GTCCATGAATTCCTCCAGCAATTCATTTCTGGGAATCTTCTTGTGCTTTTTGAAAGTCAGACTTCACAATaGTTGTTGCTGTCTTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: VHEFLQQFISGNLLVLFESQTSQ*LLLSWQ Trigger: TTGCCAAGACAGCAACAAGCATTGTGAAGTCTGACT...TTCAAAAAGCACAAGAAGATTCCCAGAAATGAATTGCTGGAGGAATTCATGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR GCA 72 bp | GGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCACTTaGCAGCTTTACAACCTCAATGGCCAGAGCAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GKALPNRQAEGT*QLYNLNGQSSA Trigger: AGCACTGCTCTGGCCATTGAGGTTGTAAAGCTGGCAAGTGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCACTACTCTTTGGGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCACTTGCAACCAGTTTGAATCCTaGTCTCTAGGCCAAAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: HHYSLGKALPNRQAEGTCNQFES*SLGQRT Trigger: GGTCCTTTGGCCTAGAGACAAGGATTCAAACTGGTT...GCAAGTGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCCCAAAGAGTAGTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTGGCCAATCAAAAGCAGGCTGCCGGGCACTCTGGTCTTCGTATGTGGATTGGCCACATCCAATGCTaGAAGAAGACCTATGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: WLANQKQAAGHSGLRMWIGHIQC*KKTYEY Trigger: ATATTCATAGGTCTTCTTCAAGCATTGGATGTGGCC...AATCCACATACGAAGACCAGAGTGCCCGGCAGCCTGCTTTTGATTGGCCAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR TCA 72 bp | GGTTACCCAGGGCTTCTTTTTGTTCTGGGTCAACTGTaGAATCCATCACTACTCTTTGGGCAAGGCTCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: GYPGLLFVLGQL*NPSLLFGQGSP Trigger: GGGAGAGCCTTGCCCAAAGAGTAGTGATGGATTTCACAGTTGACCCAGAACAAAAAGAAGCCCTGGGTAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR GCA 72 bp | TACTGTAAAGGGTTGGCTGGCCAATCAAAAGCAGGCTaGCGGGCACTCTGGTCTTCGTATGTGGATTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: YCKGLAGQSKAG*RALWSSYVDLI Trigger: TATCAAATCCACATACGAAGACCAGAGTGCCCGGCAGCCTGCTTTTGATTGGCCAGCCAACCCTTTACAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR GCA 72 bp | CTTTACAACCTCAATGGCCAGAGCAGTGCTACCGGATaGTTTCGCTGTGTCCATGAATTCCTCCAGCAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LYNLNGQSSATG*FRCVHEFLQQF Trigger: GAATTGCTGGAGGAATTCATGGACACAGCGAAAGCATCCGGTAGCACTGCTCTGGCCATTGAGGTTGTAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CCA 72 bp | TGTTCTGGGTCAACTGTGAAATCCATCACTACTCTTTaGGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: CSGSTVKSITTL*ARLSPIGKLKA Trigger: TGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCCCAAAGAGTAGTGATGGATTTCACAGTTGACCCAGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR TCA 72 bp | CCAGAGCAGTGCTACCGGATGCTTTCGCTGTGTCCATaGATTCCTCCAGCAATTCATTTCTGGGAATCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: PEQCYRMLSLCP*IPPAIHFWESS Trigger: AGAAGATTCCCAGAAATGAATTGCTGGAGGAATTCATGGACACAGCGAAAGCATCCGGTAGCACTGCTCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR TCA 72 bp | CACTGCTGCTTTCTCCATCGCTACTGTTCAGTTCAGTaGGGTTACCCAGGGCTTCTTTTTGTTCTGGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: HCCFLHRYCSVQ*GYPGLLFVLGQ Trigger: TTGACCCAGAACAAAAAGAAGCCCTGGGTAACCTCACTGAACTGAACAGTAGCGATGGAGAAAGCAGCAGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTAGGAATGAGGGTGTTTATGTGGAATTaGTTCTTCTCCAAAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRQQGPVGSNMMGVVGMRVFMWN*FFSKSQ Trigger: CTGACTTTTGGAGAAGAACAAATTCCACATAAACAC...CCTCATTCCTACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCACTACTCTTTGGGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCACTTGCGTGTTTATGTGGAATTaGTTCTTCTCCAAAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HHYSLGKALPNRQAEGTCVFMWN*FFSKSQ Trigger: CTGACTTTTGGAGAAGAACAAATTCCACATAAACAC...GCAAGTGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCCCAAAGAGTAGTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGACCTCTCTCTCTCATTaGTCGTCACTGTCACTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SNMMGVVGMRPANSVFMWTSLSH*SSLSLS Trigger: TGACAGTGACAGTGACGACAAATGAGAGAGAGAGGT...CCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CCA 72 bp | CAGTTCAGTGAGGTTACCCAGGGCTTCTTTTTGTTCTaGGTCAACTGTGAAATCCATCACTACTCTTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: QFSEVTQGFFLF*VNCEIHHYSLG Trigger: GCCCAAAGAGTAGTGATGGATTTCACAGTTGACCCAGAACAAAAAGAAGCCCTGGGTAACCTCACTGAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATCAGACTTCACAATGCTaGTTGCTGTCTTGGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NMMGVVGMRPANSVFMWNQTSQC*LLSWQK Trigger: TTTTTGCCAAGACAGCAACAAGCATTGTGAAGTCTG...ATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTCAGACTTCACAATGCTaGTTGCTGTCTTGGCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HDGRSRNEACKQCVYVEFQTSQC*LLSWQK Trigger: TTTTTGCCAAGACAGCAACAAGCATTGTGAAGTCTG...AAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCCATGAATTCCTCCAGCAATTCATTTCTGGGAATCTTCTTGTGCTTTTTGAATCTTCGTATGTGGATTaGATATCAGCAGCACAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: VHEFLQQFISGNLLVLFESSYVD*ISAAQS Trigger: TGACTGTGCTGCTGATATCAAATCCACATACGAAGA...TTCAAAAAGCACAAGAAGATTCCCAGAAATGAATTGCTGGAGGAATTCATGGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CCA 72 bp | GGTTTAGGCCAGTACAATACAATACAGAGCTTATATTaGATCCCAGCCCTGTATCTGTTTATTTTTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: GLGQYNTIQSLY*IPALYLFIFTT Trigger: AGTGGTAAAAATAAACAGATACAGGGCTGGGATCCAATATAAGCTCTGTATTGTATTGTACTGGCCTAAACC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGCGGTACTGCAGATGAACCCCAGGGTCTTAGGTTTAGGCCAGTACAATACGGACAGGCGGCGAGCTaGAACCGCCGCCGCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSGTADEPQGLRFRPVQYGQAAS*NRRRRH Trigger: ATGGCGGCGGCGGCGGTTGCAGCTCGCCGCCTGTCC...GTATTGTACTGGCCTAAACCTAAGACCCTGGGGTTCATCTGCAGTACCGCTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | AACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATGGACAGGCGGCGAGCTaGAACCGCCGCCGCCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NMMGVVGMRPANSVFMWNGQAAS*NRRRRH Trigger: ATGGCGGCGGCGGCGGTTGCAGCTCGCCGCCTGTCC...ATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGCCAAAGGACCACACATCACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTGCAACCTGAAGCTCTaGTGGATGTTTATCCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGQRTTHHRAGRQQGPVGCNLKL*WMFIPG Trigger: GCCAGGGATAAACATCCACCAGAGCTTCAGGTTGCA...ACCCACAGGCCCTTGCTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGCCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | CACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTAACTGTGGTTCCTGCTTaGAAGAGCTGGTCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: HRAGRQQGPVGSNMMGVVTVVPA*KSWSNM Trigger: CATGTTTGACCAGCTCTTGCAAGCAGGAACCACAGT...TACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTAAAAAGGATAGTCAGCTaGGGGCTCTTGGTCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: HRAGRQQGPVGSNMMGVVKRIVS*GLLVTI Trigger: TATGGTGACCAAGAGCCCCCAGCTGACTATCCTTTT...TACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTAGGAATGAGGAAAAGGATAGTCAGCTaGGGGCTCTTGGTCACCATA | + |
|
Preference number: 4 (lower is better) Translates to: GRQQGPVGSNMMGVVGMRKRIVS*GLLVTI Trigger: TATGGTGACCAAGAGCCCCCAGCTGACTATCCTTTT...CCTCATTCCTACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | GCGGTACTGCAGATGAACCCCAGGGTCTTAGGTTTAGGCCAGTACAATACAATACAATCAAAAGCAGGCTaGCGGGCACTCTGGTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AVLQMNPRVLGLGQYNTIQSKAG*RALWSS Trigger: CGAAGACCAGAGTGCCCGGCAGCCTGCTTTTGATTG...TATTGTATTGTACTGGCCTAAACCTAAGACCCTGGGGTTCATCTGCAGTACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | GCCAAAGGACCACACATCACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAATTGGCCACATCCAATaGTTGAAGAAGACCTATGAA | + |
|
Preference number: 4 (lower is better) Translates to: AKGPHITEQVGSKGLWVLIGHIQ*LKKTYE Trigger: TTCATAGGTCTTCTTCAAGCATTGGATGTGGCCAAT...TAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | TTTGAATCCTTGTCTCTAGGCCAAAGGACCACACATCACAGAGCAGGTAGGCAGTGTCACTGTCACTGCTaGTTTCTCCATCGCTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FESLSLGQRTTHHRAGRQCHCHC*FLHRYC Trigger: ACAGTAGCGATGGAGAAAGCAGCAGTGACAGTGACA...CTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGCCTAGAGACAAGGATTCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR CCA 90 bp | CTTAGCGGTACTGCAGATGAACCCCAGGGTCTTAGGTTTAGGCCAGTACAATACCTCCAGAGCAGAGGTTaGTATGAGGTAAGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSGTADEPQGLRFRPVQYLQSRG*YEVRII Trigger: GATGATCCTTACCTCATACCAACCTCTGCTCTGGAG...GTATTGTACTGGCCTAAACCTAAGACCCTGGGGTTCATCTGCAGTACCGCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTAGGAATGAGGGGCTTCTTTTTGTTCTaGGTCAACTGTGAAATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GRQQGPVGSNMMGVVGMRGFFLF*VNCEIH Trigger: ATGGATTTCACAGTTGACCCAGAACAAAAAGAAGCC...CCTCATTCCTACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | ATGTGCATCTTAGCGGTACTGCAGATGAACCCCAGGGTCTTAGGTTTAGGCCAGTTCCAGCATAAAATCTaGAACAGACCTTCGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MCILAVLQMNPRVLGLGQFQHKI*NRPSVH Trigger: GTGAACCGAAGGTCTGTTGCAGATTTTATGCTGGAA...CTGGCCTAAACCTAAGACCCTGGGGTTCATCTGCAGTACCGCTAAGATGCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR TCA 90 bp | GATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTTGGTATCCTTCCAAGTaGGTAACACTTCCGGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: DGRSRNEACKQCVYVEFVWYPSK*VTLPET Trigger: GGTCTCCGGAAGTGTTACTCACTTGGAAGGATACCA...AACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | CAGTTCAGTGAGGTTACCCAGGGCTTCTTTTTGTTCTGGGTCAACTGTGAAATCCTCAGCATTGTTTTGTaGTTTCCAAGGACCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: QFSEVTQGFFLFWVNCEILSIVL*FPRTRL Trigger: GAGTCTGGTCCTTGGAAAGCACAAAACAATGCTGAG...GATTTCACAGTTGACCCAGAACAAAAAGAAGCCCTGGGTAACCTCACTGAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| CDS-3UTR TCA 90 bp | TCTAACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGCAAGCTCTAAATCTCTaGGAGATGAACACACACTCA | + |
|
Preference number: 4 (lower is better) Translates to: SNMMGVVGMRPANSVFMWQALNL*EMNTHS Trigger: TGAGTGTGTGTTCATCTCTCAGAGATTTAGAGCTTG...CCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR TCA 90 bp | TTTGAATCCTTGTCTCTAGGCCAAAGGACCACACATCACAGAGCAGGTAGGCAGGCATCTCGGAAAGTATaGCTGTATTCTTTACTATCT | + |
|
Preference number: 4 (lower is better) Translates to: FESLSLGQRTTHHRAGRQASRKV*LYSLLS Trigger: AGATAGTAAAGAATACAGTCATACTTTCCGAGATGC...CTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGCCTAGAGACAAGGATTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR CCA 90 bp | GCGGTACTGCAGATGAACCCCAGGGTCTTAGGTTTAGGCCAGTACAATACAATACCAATTCTAGTCTATTaGCCACATCCAATGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AVLQMNPRVLGLGQYNTIPILVY*PHPMLE Trigger: TTCAAGCATTGGATGTGGCCAATAGACTAGAATTGG...TATTGTATTGTACTGGCCTAAACCTAAGACCCTGGGGTTCATCTGCAGTACCGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| 3UTR CAA 72 bp | ACTGTTCAGTTCAGTGAGGTTACCCAGGGCTTCTTTTaGTTCTGGGTCAACTGTGAAATCCATCACTACTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVQFSEVTQGFF*FWVNCEIHHYS Trigger: AGAGTAGTGATGGATTTCACAGTTGACCCAGAACAAAAAGAAGCCCTGGGTAACCTCACTGAACTGAACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTTCTCCAAAAGTCAGACCTTCGTATGTGGATTTaGTATCAGCAGCACAGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EACKQCVYVEFVLLQKSDLRMWI*YQQHSQ Trigger: CTGACTGTGCTGCTGATATCAAATCCACATACGAAG...GTCTGACTTTTGGAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR TCA 90 bp | AACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATGTTCTGGGTCAACTGTaGAATCCATCACTACTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NMMGVVGMRPANSVFMWNVLGQL*NPSLLF Trigger: AAAGAGTAGTGATGGATTTCACAGTTGACCCAGAAC...ATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | AACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTCCAGCATAAAATCTaGAACAGACCTTCGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NMMGVVGMRPANSVFMWNFQHKI*NRPSVH Trigger: GTGAACCGAAGGTCTGTTGCAGATTTTATGCTGGAA...ATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | GATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTGTGAAATACATAAGGTaGAGCTGTAGGATCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DGRSRNEACKQCVYVEFVVKYIR*SCRIPV Trigger: AACAGGGATCCTACAGCTGCACCTTATGTATTTCAC...AACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | CGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTTCTCCAAGCTGAAGGCACTTaGCAGCTTTACAACCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSRNEACKQCVYVEFVLLQAEGT*QLYNLN Trigger: ATTGAGGTTGTAAAGCTGGCAAGTGCCTTCAGCTTG...GAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR CCA 90 bp | GAATTTGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTGTTGCTGTCTTGGCACTCCAGAGCAGAGGTTaGTATGAGGTAAGGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: EFVLLQKSDFTMLVAVLALQSRG*YEVRII Trigger: GATGATCCTTACCTCATACCAACCTCTGCTCTGGAG...TGCCAAGACAGCAACAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTTCTCCAAACTTTCGCTGTGTCCATaGATTCCTCCAGCAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGMRPANSVFMWNLFFSKLSLCP*IPPAIH Trigger: ATGAATTGCTGGAGGAATTCATGGACACAGCGAAAG...TTTGGAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | TACAATACAGAGCTTATATTGGATCCCAGCCCTGTATCTGTTTATTTTTACCACCACTGTCACTGTCACTaGTGCTTTCTCCATCGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YNTELILDPSPVSVYFYHHCHCH*CFLHRY Trigger: GTAGCGATGGAGAAAGCAGCAGTGACAGTGACAGTG...GTGGTAAAAATAAACAGATACAGGGCTGGGATCCAATATAAGCTCTGTATTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| 3UTR CAA 72 bp | GGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTaGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GMRPANSVFMWN*FFSKSQTSQCL Trigger: CAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR TCA 90 bp | TGTGGAATTTGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTGTTGCTGTCTTTCAGCAAATGCAACCTaGAGCTCTGGTGGATGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CGICSSPKVRLHNACCCLSANAT*SSGGCL Trigger: TAAACATCCACCAGAGCTTCAGGTTGCATTTGCTGA...AAGACAGCAACAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAAATTCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR GCA 90 bp | ATGAATTCCTCCAGCAATTCATTTCTGGGAATCTTCTTGTGCTTTTTGAAGAGTACTGTGGTTCCTGCTTaGAAGAGCTGGTCAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: MNSSSNSFLGIFLCFLKSTVVPA*KSWSNM Trigger: CATGTTTGACCAGCTCTTGCAAGCAGGAACCACAGT...ACTCTTCAAAAAGCACAAGAAGATTCCCAGAAATGAATTGCTGGAGGAATTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | CCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTTCTCCAAAAGTCAGACTTCACTCAGCATTGTTTTGTaGTTTCCAAGGACCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PANSVFMWNLFFSKSQTSLSIVL*FPRTRL Trigger: GAGTCTGGTCCTTGGAAAGCACAAAACAATGCTGAG...TGAAGTCTGACTTTTGGAGAAGAACAAATTCCACATAAACACACTGTTTGCAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CCA 90 bp | AGAGCTTATATTGGATCCCAGCCCTGTATCTGTTTATTTTTACCACTTCTAACAAACCTGAAGCTCTGGTaGATGTTTATCCCTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RAYIGSQPCICLFLPLLTNLKLW*MFIPGH Trigger: ATGGCCAGGGATAAACATCCACCAGAGCTTCAGGTT...TGTTAGAAGTGGTAAAAATAAACAGATACAGGGCTGGGATCCAATATAAGCTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR TCA 90 bp | GTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTTCTCCAAATCCATCTTGGATGTTTaGTTATTTTCCTCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGMRPANSVFMWNLFFSKSILDV*LFSSAA Trigger: AGCTGCAGAGGAAAATAATCAAACATCCAAGATGGA...TTTGGAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | AAAATCTACCATCATCAAGGTCCTGTGGAGAAAATGTTCTTCCCTCTAATTCATCTCAGCATTGTTTTGTaGTTTCCAAGGACCAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KIYHHQGPVEKMFFPLIHLSIVL*FPRTRL Trigger: GAGTCTGGTCCTTGGAAAGCACAAAACAATGCTGAG...ATGAATTAGAGGGAAGAACATTTTCTCCACAGGACCTTGATGATGGTAGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205556.2 ENSMUST00000206879.2 |
||
| CDS-3UTR GCA 90 bp | GTCCATGAATTCCTCCAGCAATTCATTTCTGGGAATCTTCTTGTGCTTTTTGAAAGTTTAAGCCTTGTATaGTCATCCATCCAGTTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VHEFLQQFISGNLLVLFESLSLV*SSIQLR Trigger: CCTTAACTGGATGGATGAGCATACAAGGCTTAAACT...TTCAAAAAGCACAAGAAGATTCCCAGAAATGAATTGCTGGAGGAATTCATGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| 3UTR CAA 72 bp | AGGTTTAGGCCAGTACAATACAATACAGAGCTTATATaGGATCCCAGCCCTGTATCTGTTTATTTTTACCAC | + |
|
Preference number: 4 (lower is better) Translates to: RFRPVQYNTELI*DPSPVSVYFYH Trigger: GTGGTAAAAATAAACAGATACAGGGCTGGGATCCAATATAAGCTCTGTATTGTATTGTACTGGCCTAAACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CCA 90 bp | TTGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTGTTGCTGTCTTGGCAAAAAGACCAGACTCCATCTTaGATGTTTGATTATTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFFSKSQTSQCLLLSWQKDQTPS*MFDYFP Trigger: AGGAAAATAATCAAACATCCAAGATGGAGTCTGGTC...TTTTTGCCAAGACAGCAACAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | GGCCAAAGGACCACACATCACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTCCTCTCAGCATTGTTTaGTGCTTTCCAAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GQRTTHHRAGRQQGPVGSPLSIV*CFPRTR Trigger: TCTGGTCCTTGGAAAGCACAAAACAATGCTGAGAGG...AGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTACTGATCCTTCAACCTTaGGGAGGGATTCAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRAGRQQGPVGSNMMGVVLILQP*GGIQFQ Trigger: CTGGAACTGAATCCCTCCCAAAGGTTGAAGGATCAG...TACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS GCA 90 bp | CTGATCCTTCAACCTTTGGGAGGGATTCAGTTCCAGCATAAAATCTaGAACAGACCTTCGGTTCACACACACCCGTCCCCCGAGTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LILQPLGGIQFQHKI*NRPSVHTHPSPEWS Trigger: AGACCACTCGGGGGACGGGTGTGTGTGAACCGAAGGTCTGTTGCAGATTTTATGCTGGAACTGAATCCCTCCCAAAGGTTGAAGGATCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000082094.5 ENSMUST00000206284.2 ENSMUST00000206879.2 |
||
| CDS GCA 90 bp | CAGTTAAGGTTACACAGAGACCCTTCACCATCCCTCGGATCATCGTaGAGTAGGAGCGTGCATTCTTCTCTGGCATTAAAGCGAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: QLRLHRDPSPSLGSS*SRSVHSSLALKRRS Trigger: GGATCTTCGCTTTAATGCCAGAGAAGAATGCACGCTCCTACTGCACGATGATCCGAGGGATGGTGAAGGGTCTCTGTGTAACCTTAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | ACTACTCTTTGGGCAAGGCTCTCCCCAATAGGCAAGCTGAAGGCACTTGCCAGCAAGATCCTCTCAGCATaGTTTTGTGCTTTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: TTLWARLSPIGKLKALASKILSA*FCAFQG Trigger: TCCTTGGAAAGCACAAAACAATGCTGAGAGGATCTT...GCTGGCAAGTGCCTTCAGCTTGCCTATTGGGGAGAGCCTTGCCCAAAGAGTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | CACAGAGCAGGTAGGCAGCAAGGGCCTGTGGGTTCTAACATGATGGGCGTAGTACAAATGTTCAGTTTGTaGAAAAGGATAGTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HRAGRQQGPVGSNMMGVVQMFSL*KRIVSW Trigger: CCAGCTGACTATCCTTTTCAACAAACTGAACATTTG...TACTACGCCCATCATGTTAGAACCCACAGGCCCTTGCTGCCTACCTGCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | TCTAACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGATCCATCACTACTCTTaGGGCAAGGCTCTCCCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SNMMGVVGMRPANSVFMWIHHYS*GKALPN Trigger: ATTGGGGAGAGCCTTGCCCAAAGAGTAGTGATGGAT...CCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS GCA 90 bp | GCATTAAAGGTATATACATCAGCTTCACCATCCCTCGGATCATCGTaGAGTAGGAGCGTGCATTCTTCTCTGGCATTAAAGCGAAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALKVYTSASPSLGSS*SRSVHSSLALKRRS Trigger: GGATCTTCGCTTTAATGCCAGAGAAGAATGCACGCTCCTACTGCACGATGATCCGAGGGATGGTGAAGCTGATGTATATACCTTTAATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205556.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCGACTGTGGTTCCTGCTaGCAAGAGCTGGTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: MGVVGMRPANSVFMWNLFDCGSC*QELVKH Trigger: ATGTTTGACCAGCTCTTGCAAGCAGGAACCACAGTC...GAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | TTTGAATCCTTGTCTCTAGGCCAAAGGACCACACATCACAGAGCAGGTAGGCAGTCTTCGTATGTGGATTaGATATCAGCAGCACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FESLSLGQRTTHHRAGRQSSYVD*ISAAQS Trigger: TGACTGTGCTGCTGATATCAAATCCACATACGAAGA...CTGCCTACCTGCTCTGTGATGTGTGGTCCTTTGGCCTAGAGACAAGGATTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR CAA 90 bp | AACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATACCCAGGGCTTCTTTTaGTTCTGGGTCAACTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NMMGVVGMRPANSVFMWNTQGFF*FWVNCE Trigger: TTCACAGTTGACCCAGAACAAAAAGAAGCCCTGGGT...ATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR CAA 90 bp | GAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTTCTCCAAAAGTCAGACCCTCTCAGCATTGTTTaGTGCTTTCCAAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EACKQCVYVEFVLLQKSDPLSIV*CFPRTR Trigger: TCTGGTCCTTGGAAAGCACAAAACAATGCTGAGAGG...GTCTGACTTTTGGAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | TCTAACATGATGGGCGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAAGATCCTCTCAGCATaGTTTTGTGCTTTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SNMMGVVGMRPANSVFMWKILSA*FCAFQG Trigger: TCCTTGGAAAGCACAAAACAATGCTGAGAGGATCTT...CCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACGCCCATCATGTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | ACGATCAACTCAACAGTAATAACCCATCTCCATGAAAACCAGTTTGAATCCTTGCTGATCCTTCAACCTTaGGGAGGGATTCAGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TINSTVITHLHENQFESLLILQP*GGIQFQ Trigger: CTGGAACTGAATCCCTCCCAAAGGTTGAAGGATCAG...CAAGGATTCAAACTGGTTTTCATGGAGATGGGTTATTACTGTTGAGTTGATCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | AAAATCTACCATCATCAAGGTCCTGTGGAGAAAATGTTCTTCCCTCTAATTCATGACTGTGGTTCCTGCTaGCAAGAGCTGGTCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: KIYHHQGPVEKMFFPLIHDCGSC*QELVKH Trigger: ATGTTTGACCAGCTCTTGCAAGCAGGAACCACAGTC...ATGAATTAGAGGGAAGAACATTTTCTCCACAGGACCTTGATGATGGTAGATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | CGTAGTAGGAATGAGGCCTGCAAACAGTGTGTTTATGTGGAATTTGTTCTTCTCCTCCATCTTGGATGTTaGATTATTTTCCTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RSRNEACKQCVYVEFVLLLHLGC*IIFLCS Trigger: GCTGCAGAGGAAAATAATCAAACATCCAAGATGGAG...GAGAAGAACAAATTCCACATAAACACACTGTTTGCAGGCCTCATTCCTACTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | GAATTTGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTGTTGCTGTCTTGGCACTCCATCTTGGATGTTaGATTATTTTCCTCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EFVLLQKSDFTMLVAVLALHLGC*IIFLCS Trigger: GCTGCAGAGGAAAATAATCAAACATCCAAGATGGAG...TGCCAAGACAGCAACAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | GATGGTATGTTGCAAGTGAGGGTTCTATTCCAATATGTTTCATTTCACGTAGTACCTCTCAGCATTGTTTaGTGCTTTCCAAGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DGMLQVRVLFQYVSFHVVPLSIV*CFPRTR Trigger: TCTGGTCCTTGGAAAGCACAAAACAATGCTGAGAGG...TACTACGTGAAATGAAACATATTGGAATAGAACCCTCACTTGCAACATACCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000205556.2 ENSMUST00000206879.2 |
||
| CDS-3UTR CAA 90 bp | TGTGGAATTTGTTCTTCTCCAAAAGTCAGACTTCACAATGCTTGTTGCTGTCTTGGCCACATCCAATGCTaGAAGAAGACCTATGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: CGICSSPKVRLHNACCCLGHIQC*KKTYEY Trigger: ATATTCATAGGTCTTCTTCAAGCATTGGATGTGGCC...AAGACAGCAACAAGCATTGTGAAGTCTGACTTTTGGAGAAGAACAAATTCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS-3UTR CAA 90 bp | AAAATCTACCATCATCAAGGTCCTGTGGAGAAAATGTTCTTCCCTCTAATTCATAAGATCCTCTCAGCATaGTTTTGTGCTTTCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: KIYHHQGPVEKMFFPLIHKILSA*FCAFQG Trigger: TCCTTGGAAAGCACAAAACAATGCTGAGAGGATCTT...ATGAATTAGAGGGAAGAACATTTTCTCCACAGGACCTTGATGATGGTAGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000205556.2 ENSMUST00000206879.2 |
||
| CDS GCA 72 bp | CCGTCCCCCGAGTGGTCTGCAGCAAGACAAGCCCGCTaGGAAAGGACAGGCGGCGAGCTGCAACCGCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: PSPEWSAARQAR*ERTGGELQPPP Trigger: CGGCGGCGGTTGCAGCTCGCCGCCTGTCCTTTCGCAGCGGGCTTGTCTTGCTGCAGACCACTCGGGGGACGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS GCA 72 bp | TTACACAGAGACCCTTCACCATCCCTCGGATCATCGTaGAGTAGGAGCGTGCATTCTTCTCTGGCATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LHRDPSPSLGSS*SRSVHSSLALK Trigger: CTTTAATGCCAGAGAAGAATGCACGCTCCTACTGCACGATGATCCGAGGGATGGTGAAGGGTCTCTGTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206879.2 |
||
| CDS TCA 72 bp | CAACCTGAAGCTCTGGTGGATGTTTATCCCTGGCCATaGGCATCAATACTTCTTCTCTTAGGGCATCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: QPEALVDVYPWP*ASILLLLGHLG Trigger: TCCGAGATGCCCTAAGAGAAGAAGTATTGATGCTCATGGCCAGGGATAAACATCCACCAGAGCTTCAGGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082094.5 |
||
| CDS GCA 72 bp | GTATATACATCAGCTTCACCATCCCTCGGATCATCGTaGAGTAGGAGCGTGCATTCTTCTCTGGCATTAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VYTSASPSLGSS*SRSVHSSLALK Trigger: CTTTAATGCCAGAGAAGAATGCACGCTCCTACTGCACGATGATCCGAGGGATGGTGAAGCTGATGTATATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205556.2 |
||
| CDS TCA 72 bp | TGTGCTTTCCAAGGACCAGACTCCATCTTGGATGTTTaGTTATTTTCCTCTGCAGCTTCTTCCAAGTTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CAFQGPDSILDV*LFSSAASSKFS Trigger: GGAAAACTTGGAAGAAGCTGCAGAGGAAAATAATCAAACATCCAAGATGGAGTCTGGTCCTTGGAAAGCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||
| CDS CCA 72 bp | CATTGTTTTGTGCTTTCCAAGGACCAGACTCCATCTTaGATGTTTGATTATTTTCCTCTGCAGCTTCTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: HCFVLSKDQTPS*MFDYFPLQLLP Trigger: TGGAAGAAGCTGCAGAGGAAAATAATCAAACATCCAAGATGGAGTCTGGTCCTTGGAAAGCACAAAACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082094.5 ENSMUST00000206879.2 |
||