Pregenerated sensors for PTCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029624Ensembl transcript IDs: ENSMUST00000031628.10
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTTCTTCTTCTGTTTCAGGGTCGCATCATCGAGTGCACACACTGTaGCTGCCGGGGTTGCTCTGGCTGACACCCTTGACTCCTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: CSSSVSGSHHRVHTL*LPGLLWLTPLTPLH Trigger: ATGCAGAGGAGTCAAGGGTGTCAGCCAGAGCAACCCCGGCAGCCACAGTGTGTGCACTCGATGATGCGACCCTGAAACAGAAGAAGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR TCA 90 bp | TCCTGGTCTTTGGACCTTGGACTTAAGACTTATTGGGCCACTGCCTaGAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SWSLDLGLKTYWATA*SNSSQSGAQRKDPG Trigger: CCCTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCCAATAAGTCTTAAGTCCAAGGTCCAAAGACCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACCCCCACCAGTAGAGATGCTCTaGAAGGGAGTGTGCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GLVASRKGGKDSIAPGPPPVEML*KGVCRA Trigger: AGCCCTGCACACTCCCTTGCAGAGCATCTCTACTGG...TGGGGGTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTGTCTTGTTACAGCAATCACACACAGACACTAACTTCCGCCTGGTAGTACGAGTGCACACACTGTaGCTGCCGGGGTTGCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: KCVLLQQSHTDTNFRLVVRVHTL*LPGLLW Trigger: CCAGAGCAACCCCGGCAGCCACAGTGTGTGCACTCG...TACTACCAGGCGGAAGTTAGTGTCTGTGTGTGATTGCTGTAACAAGACACACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTGTCTTGTTACAGCAATCACACACAGACACTAACTTCCGCCTGGTAGTACTGCCGGGGTTGCTCTaGCTGACACCCTTGACTCCT | + |
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Preference number: 2 (lower is better) Translates to: KCVLLQQSHTDTNFRLVVLPGLL*LTPLTP Trigger: AGGAGTCAAGGGTGTCAGCCAGAGCAACCCCGGCAG...TACTACCAGGCGGAAGTTAGTGTCTGTGTGTGATTGCTGTAACAAGACACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTGTCTTGTTACAGCAATCACACACAGACACTAACTTCCGCCTGGTAGTAGTTGTCAGGATGCTTTaGCCTGGTGTGGGACCTGCT | + |
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Preference number: 2 (lower is better) Translates to: KCVLLQQSHTDTNFRLVVVVRML*PGVGPA Trigger: AGCAGGTCCCACACCAGGCCAAAGCATCCTGACAAC...TACTACCAGGCGGAAGTTAGTGTCTGTGTGTGATTGCTGTAACAAGACACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR-3UTR GCA 90 bp | AAGTGTGTCTTGTTACAGCAATCACACACAGACACTAACTTCCGCCTGGTAGTACTCTTCTCAGAGTGGTaGTCAGAGAAAAGACCCAGG | + |
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Preference number: 2 (lower is better) Translates to: KCVLLQQSHTDTNFRLVVLFSEW*SEKRPR Trigger: CCTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAG...TACTACCAGGCGGAAGTTAGTGTCTGTGTGTGATTGCTGTAACAAGACACACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR TCA 72 bp | TGGCCTGGTGTGGGACCTGCTATGATCTGGGCACCCTaGGCCCAGCATTTGCCTGTAAAGTGCTGTGGTGCC | + |
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Preference number: 3 (lower is better) Translates to: WPGVGPAMIWAP*AQHLPVKCCGA Trigger: GGCACCACAGCACTTTACAGGCAAATGCTGGGCTCAGGGTGCCCAGATCATAGCAGGTCCCACACCAGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR GCA 72 bp | GATCGTTGTCAGGATGCTTTGGCCTGGTGTGGGACCTaGTATGATCTGGGCACCCTGAGCCCAGCATTTGCC | + |
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Preference number: 3 (lower is better) Translates to: DRCQDALAWCGT*YDLGTLSPAFA Trigger: GGCAAATGCTGGGCTCAGGGTGCCCAGATCATAGCAGGTCCCACACCAGGCCAAAGCATCCTGACAACGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CCA 72 bp | CTGTGTGACCATGATCGTTGTCAGGATGCTTTGGCCTaGTGTGGGACCTGCTATGATCTGGGCACCCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: LCDHDRCQDALA*CGTCYDLGTLS Trigger: GCTCAGGGTGCCCAGATCATAGCAGGTCCCACACCAGGCCAAAGCATCCTGACAACGATCATGGTCACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CCA 72 bp | AGATGCTGTGTGACCATGATCGTTGTCAGGATGCTTTaGCCTGGTGTGGGACCTGCTATGATCTGGGCACCC | + |
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Preference number: 3 (lower is better) Translates to: RCCVTMIVVRML*PGVGPAMIWAP Trigger: GGGTGCCCAGATCATAGCAGGTCCCACACCAGGCCAAAGCATCCTGACAACGATCATGGTCACACAGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CCA 72 bp | TGGCTGACACCCTTGACTCCTCTGCATCCTGGTCTTTaGACCTTGGACTTAAGACTTATTGGGCCACTGCCT | + |
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Preference number: 3 (lower is better) Translates to: WLTPLTPLHPGL*TLDLRLIGPLP Trigger: AGGCAGTGGCCCAATAAGTCTTAAGTCCAAGGTCCAAAGACCAGGATGCAGAGGAGTCAAGGGTGTCAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR-3UTR CAA 90 bp | GCTCTGCAAGGGAGTGTGCAGGGCTGTAGCAGTGTGTTCAAATGTTCTTCTTCTTCTTGGCCTCTGAAGTaGAAAGGACTCCCAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: ALQGSVQGCSSVFKCSSSSWPLK*KGLPGS Trigger: GGAGCCTGGGAGTCCTTTCAACTTCAGAGGCCAAGA...AGAAGAAGAACATTTGAACACACTGCTACAGCCCTGCACACTCCCTTGCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR TCA 72 bp | TGGCCTCAGGAACTCTGGCTTTCGCCCTCTTGGCAGTaGCAAGTGTGTCTTGTTACAGCAATCACACACAGA | + |
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Preference number: 3 (lower is better) Translates to: WPQELWLSPSWQ*QVCLVTAITHR Trigger: TCTGTGTGTGATTGCTGTAACAAGACACACTTGTCACTGCCAAGAGGGCGAAAGCCAGAGTTCCTGAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CCA 72 bp | GTTACCAGAGAACTTTATTTGTTTAGAATGGGCTCGTaGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTC | + |
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Preference number: 3 (lower is better) Translates to: VTRELYLFRMGS*PPEKEVKTALL Trigger: GAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCCATTCTAAACAAATAAAGTTCTCTGGTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CCTCTGAAGTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACGGCCCCGCCACGGTCTaGGCTCCAGTTCTTCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PLKLKGLPGSPSSVKAGHGPATV*APVLPP Trigger: AGGAGGAAGAACTGGAGCCCAGACCGTGGCGGGGCC...GTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAACTTCAGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR TCA 90 bp | CCTCTGAAGTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACGGGGAGCCACAGTGCTaGGCTTACTGGAGTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: PLKLKGLPGSPSSVKAGHGEPQC*AYWSQS Trigger: GCTCTGACTCCAGTAAGCTCAGCACTGTGGCTCCCC...GTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAACTTCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACTTGTCATAGTGCAGGTCCCTCCCTaGCTCCTGTCCATCGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: VERTPRLPQQCEGWALVIVQVPP*LLSIGL Trigger: CAACCCGATGGACAGGAGGCAGGGAGGGACCTGCAC...TATGACAAGTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | GGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACCCCCACTGCTCATTTCCTTCTaGTTCCCGCTGCCCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GLVASRKGGKDSIAPGPPLLISF*FPLPRG Trigger: GCCCCTGGGCAGCGGGAACCAGAAGGAAATGAGCAG...TGGGGGTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CCTCTGAAGTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACCATATGCCTGCCCTTTaGGGGTGGGAGCAAGATGGT | + |
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Preference number: 4 (lower is better) Translates to: PLKLKGLPGSPSSVKAGHHMPAL*GWEQDG Trigger: ACCATCTTGCTCCCACCCCCAAAGGGCAGGCATATG...GTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAACTTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGGGCCAGGTTCTGCCGTaGTTTCCACCTCAGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GPLPEATLLRVVLREKTQGQVLP*FPPQAG Trigger: CCCAGCCTGAGGTGGAAACCACGGCAGAACCTGGCC...CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | GGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACCCCCAGTGAGGGCTACTGTGTaGCCAGGTTCTGCCGTGGTT | + |
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Preference number: 4 (lower is better) Translates to: GLVASRKGGKDSIAPGPPVRATV*PGSAVV Trigger: AACCACGGCAGAACCTGGCCACACAGTAGCCCTCAC...TGGGGGTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR TCA 90 bp | CTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCTTTGGTCGAGGCCAGTGGGGTaGGGGCTACTGTGTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: LALCCRCCVTMIVVRMLWSRPVG*GLLCGQ Trigger: CTGGCCACACAGTAGCCCTCACCCCACTGGCCTCGA...CCAAAGCATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | TTAGTCCTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGGGCAGCTCTCAGCCGTaGAGGTCCCTCCCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: LVLALCCRCCVTMIVVRMGSSQP*RSLPAS Trigger: GGAGGCAGGGAGGGACCTGCACGGCTGAGAGCTGCC...CATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAGGACTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGTCCGGGAGGAGAATTTaGCAGAGAGGCTCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GPLPEATLLRVVLREKTQSGRRI*QRGSRS Trigger: GCTTCGGGAGCCTCTCTGGCAAATTCTCCTCCCGGA...CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGCGTGTTCGGTCATCTTaGCCAGGAAGCCTTCCAGGC | + |
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Preference number: 4 (lower is better) Translates to: GPLPEATLLRVVLREKTQRVRSS*PGSLPG Trigger: GCCTGGAAGGCTTCCTGGGCAAGATGACCGAACACG...CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGGCTGCAAACTCCAGCTaGCGGACGACCACCTCGTTT | + |
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Preference number: 4 (lower is better) Translates to: GPLPEATLLRVVLREKTQAANSS*RTTTSF Trigger: AAACGAGGTGGTCGTCCGCCAGCTGGAGTTTGCAGC...CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGTCAGCACCGTGTAGTTaGACTCCAGAGGCTGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: GPLPEATLLRVVLREKTQSAPCS*TPEAAS Trigger: GCTTGCAGCCTCTGGAGTGCAACTACACGGTGCTGA...CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | AGAATGGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACTTTCTGGCCTGGAGCTaGTGTCGGAGCTTCAGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RMGSWPPEKEVKTALLQDFLAWS*CRSFRA Trigger: TGCCCTGAAGCTCCGACAGCAGCTCCAGGCCAGAAA...GTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCCATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGCACACCTGCATGGCTTaGCGGAAGCCTGTCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GPLPEATLLRVVLREKTQHTCMA*RKPVFL Trigger: CAAGAAGACAGGCTTCCGGCAAGCCATGCAGGTGTG...CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GGAATATTCTTGGCCTCTGAAGTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTTGTGTGGCCAGGTTCTaGCGTGGTTTCCACCTCAGG | + |
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Preference number: 4 (lower is better) Translates to: GIFLASEVERTPRLPQQCCVARF*RGFHLR Trigger: CCTGAGGTGGAAACCACGGCAGAACCTGGCCACACA...ACACTGCTGGGGGAGCCTGGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | GGAATATTCTTGGCCTCTGAAGTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTCCTGCCCTTTGGGGGTaGGAGCAAGATGGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: GIFLASEVERTPRLPQQCPALWG*EQDGLF Trigger: GAAGAGACCATCTTGCTCCCACCCCCAAAGGGCAGG...ACACTGCTGGGGGAGCCTGGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CAA 72 bp | GCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTaGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAG | + |
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Preference number: 4 (lower is better) Translates to: AVVPLEYSWPLK*KGLPGSPSSVK Trigger: CTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACCCCCAGGACTTCTTCATGTCTaGAAGCAGCTGCATACCATC | + |
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Preference number: 4 (lower is better) Translates to: GLVASRKGGKDSIAPGPPGLLHV*KQLHTI Trigger: GATGGTATGCAGCTGCTTGCAGACATGAAGAAGTCC...TGGGGGTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | TTAGTCCTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGGGGAGGGTACTCGGCTaGAAACTCCAGCTGGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: LVLALCCRCCVTMIVVRMGRVLG*KLQLAD Trigger: GTCCGCCAGCTGGAGTTTGCAGCCGAGTACCCTCCC...CATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAGGACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CAAATGTTCTTCTTCTGTTTCAGGGTCGCATCATCGAGTGCACACACTGTGGCTTCCTCTGCCTCCTCCTaGGGAGCCACAGTGCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: QMFFFCFRVASSSAHTVASSASS*GATVLS Trigger: GCTCAGCACTGTGGCTCCCCAGGAGGAGGCAGAGGA...AGCCACAGTGTGTGCACTCGATGATGCGACCCTGAAACAGAAGAAGAACATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGGGCCTCAGGAAGGGCTaGTGGCCCCTCGAGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: PVKCCGASGIFLASEVERGLRKG*WPLEFL Trigger: CAGAAACTCGAGGGGCCACCAGCCCTTCCTGAGGCC...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CAA 72 bp | CTGGCTGACACCCTTGACTCCTCTGCATCCTGGTCTTaGGACCTTGGACTTAAGACTTATTGGGCCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: LADTLDSSASWS*DLGLKTYWATA Trigger: GGCAGTGGCCCAATAAGTCTTAAGTCCAAGGTCCAAAGACCAGGATGCAGAGGAGTCAAGGGTGTCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR TCA 90 bp | AGAGATGCTCTGCAAGGGAGTGTGCAGGGCTGTAGCAGTGTGTTCAAATGTTCTAAGAAGTACCAGTACTaGGTGTTCCTCCGGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: RDALQGSVQGCSSVFKCSKKYQY*VFLRPR Trigger: GCGGGGCCGGAGGAACACTCAGTACTGGTACTTCTT...AGAACATTTGAACACACTGCTACAGCCCTGCACACTCCCTTGCAGAGCATCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GCTCTGCAAGGGAGTGTGCAGGGCTGTAGCAGTGTGTTCAAATGTTCTTCTTCTAGCTTCAGGGCACTCTaGAGGGCAGAGTCCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: ALQGSVQGCSSVFKCSSSSFRAL*RAESFQ Trigger: CTGGAAGGACTCTGCCCTGCAGAGTGCCCTGAAGCT...AGAAGAAGAACATTTGAACACACTGCTACAGCCCTGCACACTCCCTTGCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | CAAATGTTCTTCTTCTGTTTCAGGGTCGCATCATCGAGTGCACACACTGTGGCTCCCAGACTCAGCATCTaGCGCCACACCTGCATGGCT | + |
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Preference number: 4 (lower is better) Translates to: QMFFFCFRVASSSAHTVAPRLSI*RHTCMA Trigger: AGCCATGCAGGTGTGGCGGCAGATGCTGAGTCTGGG...AGCCACAGTGTGTGCACTCGATGATGCGACCCTGAAACAGAAGAAGAACATTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | CAAATGTTCTTCTTCTGTTTCAGGGTCGCATCATCGAGTGCACACACTGTGGCTTTCCTCCCTGCCATATaGCTGCCCTTTGGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: QMFFFCFRVASSSAHTVAFLPAI*LPFGGG Trigger: CCCACCCCCAAAGGGCAGGCATATGGCAGGGAGGAA...AGCCACAGTGTGTGCACTCGATGATGCGACCCTGAAACAGAAGAAGAACATTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCTTTGGTTGGCAACAGTGCCTTaGCTCCCTCCAGGTCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LALCCRCCVTMIVVRMLWLATVP*LPPGLP Trigger: TGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAA...CCAAAGCATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CAA 72 bp | TTGCCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTaGGCCTCTGAAGTTGAAAGGACTCCCAGGCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: LPVKCCGASGIF*ASEVERTPRLP Trigger: GGGGAGCCTGGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | AGAATGGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACCAGATCCAGGGCCTCTaGAAGCTTTCCTTCCTTGAT | + |
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Preference number: 4 (lower is better) Translates to: RMGSWPPEKEVKTALLQDQIQGL*KLSFLD Trigger: ATCAAGGAAGGAAAGCTTGCAGAGGCCCTGGATCTG...GTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCCATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | TTAGTCCTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCAGGATTGGCAACAGTaGCTTGGCTCCCTCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LVLALCCRCCVTMIVVRMQDWQQ*LGSLQV Trigger: GACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTG...CATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAGGACTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | GTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACTTGTCATAAACCAATGGCCAGATTaGAGAAAGTCCGAAGATTGG | + |
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Preference number: 4 (lower is better) Translates to: VERTPRLPQQCEGWALVINQWPD*RKSEDW Trigger: CCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTT...TATGACAAGTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGTCCTGCTTGTTACCCTaGCCTCAGGAAGGGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVKCCGASGIFLASEVERSCLLP*PQEGLV Trigger: CACCAGCCCTTCCTGAGGCCAGGGTAACAAGCAGGA...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | AAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGACTCCCGTTTCCACCTCAGGCTaGGTCCTGCTTGTTACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCCGASGIFLASEVERTPVSTSG*VLLVTL Trigger: CAGGGTAACAAGCAGGACCCAGCCTGAGGTGGAAAC...GGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR TCA 90 bp | AGAATGGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACACAAGATCCAGGTGTTaGAGGACAGACAGTCCTATG | + |
|
Preference number: 4 (lower is better) Translates to: RMGSWPPEKEVKTALLQDTRSRC*RTDSPM Trigger: CATAGGACTGTCTGTCCTTCAACACCTGGATCTTGT...GTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | AGAATGGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACTCTTCCTTCAGCATCTaGCTCTCAAACAGATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RMGSWPPEKEVKTALLQDSSFSI*LSNRSR Trigger: CCTGGATCTGTTTGAGAGGCAGATGCTGAAGGAAGA...GTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGTTGCACTCCAGAGGCTaGAAGCGCTCTTCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVKCCGASGIFLASEVERLHSRG*KRSSFS Trigger: GCTGAAGGAAGAGCGCTTGCAGCCTCTGGAGTGCAA...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | AGAATGGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACGACAATTCCCTTCTTTaGCAGGATTGGCAACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RMGSWPPEKEVKTALLQDDNSLL*QDWQQC Trigger: GCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTC...GTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCCATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | CTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCTTTGGACTGGGACGCTGTTCTaGCTCATGTCCTTCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LALCCRCCVTMIVVRMLWTGTLF*LMSFRM Trigger: CATCCTGAAGGACATGAGGCAGAACAGCGTCCCAGT...CCAAAGCATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | GGGCCACTGCCTGAAGCAACTCTTCTCAGAGTGGTGCTCAGAGAAAAGACCCAGACTGCATGCCCCCTTTaGATGATTTCCTTGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GPLPEATLLRVVLREKTQTACPL*MISLKT Trigger: TGTCTTCAAGGAAATCATCCAAAGGGGGCATGCAGT...CTGGGTCTTTTCTCTGAGCACCACTCTGAGAAGAGTTGCTTCAGGCAGTGGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCTTTGGTGCACTGTCTTGGCCTaGACTTTCCTCCCTGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LALCCRCCVTMIVVRMLWCTVLA*TFLPAI Trigger: TATGGCAGGGAGGAAAGTCCAGGCCAAGACAGTGCA...CCAAAGCATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | GCTCTGCAAGGGAGTGTGCAGGGCTGTAGCAGTGTGTTCAAATGTTCTTCTTCTGCCTATCAGCAGGTGTaGCCACTGTCCCAAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSVQGCSSVFKCSSSAYQQV*PLSQMR Trigger: TCTCATTTGGGACAGTGGCCACACCTGCTGATAGGC...AGAAGAAGAACATTTGAACACACTGCTACAGCCCTGCACACTCCCTTGCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | AAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGACTCCCCTTCTTTGCCAGGATTaGCAACAGTGCCTTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCCGASGIFLASEVERTPLLCQD*QQCLGS Trigger: GGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAG...GGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR TCA 90 bp | CAAATGTTCTTCTTCTGTTTCAGGGTCGCATCATCGAGTGCACACACTGTGGCTCAAGACTTAGGAGACTaGCTTCCAGCTCCAAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMFFFCFRVASSSAHTVAQDLGD*LPAPSG Trigger: CCCACTTGGAGCTGGAAGTCAGTCTCCTAAGTCTTG...AGCCACAGTGTGTGCACTCGATGATGCGACCCTGAAACAGAAGAAGAACATTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGCTGAGTGACACACCATaGACTGTCTTGGCCTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVKCCGASGIFLASEVERLSDTP*TVLAWT Trigger: AGTCCAGGCCAAGACAGTGCATGGTGTGTCACTCAG...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | TTAGTCCTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCCTGTCTTCTTGTCCTaGATGCAGCCCACAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVLALCCRCCVTMIVVRMPVFLS*MQPTSR Trigger: TCTGCTTGTGGGCTGCATCCAGGACAAGAAGACAGG...CATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAGGACTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| 3UTR CAA 72 bp | TCTGGCTTTCGCCCTCTTGGCAGTGACAAGTGTGTCTaGTTACAGCAATCACACACAGACACTAACTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGFRPLGSDKCV*LQQSHTDTNFR Trigger: GCGGAAGTTAGTGTCTGTGTGTGATTGCTGTAACAAGACACACTTGTCACTGCCAAGAGGGCGAAAGCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR TCA 90 bp | GCTCTGCAAGGGAGTGTGCAGGGCTGTAGCAGTGTGTTCAAATGTTCTTCTTCTGATACGTTTTCAGGTTaGGCTGGAAGTTTCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALQGSVQGCSSVFKCSSSDTFSG*AGSFWP Trigger: AGGCCAGAAACTTCCAGCTCAACCTGAAAACGTATC...AGAAGAAGAACATTTGAACACACTGCTACAGCCCTGCACACTCCCTTGCAGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR TCA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGCATGCCTACTTGGTTTaGTCCCCAGACTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PVKCCGASGIFLASEVERHAYLV*SPDSAS Trigger: AGATGCTGAGTCTGGGGATCAAACCAAGTAGGCATG...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | CAAATGTTCTTCTTCTGTTTCAGGGTCGCATCATCGAGTGCACACACTGTGGCTAGTCAGAGCAGAGGCTaGTCATTTCCTTCTGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QMFFFCFRVASSSAHTVASQSRG*SFPSGS Trigger: GGAACCAGAAGGAAATGAGCAGCCTCTGCTCTGACT...AGCCACAGTGTGTGCACTCGATGATGCGACCCTGAAACAGAAGAAGAACATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | AAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGACTCCCTCTTCTTGTCCTGGATaGAGCCCACAAGCAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KCCGASGIFLASEVERTPSSCPG*SPQAEN Trigger: GTTTTCTGCTTGTGGGCTGCATCCAGGACAAGAAGA...GGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | TTAGTCCTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGGTTTTCAGGTTGAGCTaGAAGTTTCTGGCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVLALCCRCCVTMIVVRMVFRLS*KFLAWS Trigger: GCTCCAGGCCAGAAACTTCCAGCTCAACCTGAAAAC...CATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAGGACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCTCCTGGAGGCAACCTCTaGGTCCCCCAGACCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: CTGDDFSVHQLRSVKIKPPGGNL*VPQTTV Trigger: GACTGTGGTCTGGGGGACCCAGAGGTTGCCTCCAGG...AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCTACGTCAGGAGCAGCCTaGAGGCAACCTCTGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: CTGDDFSVHQLRSVKIKPTSGAA*RQPLGP Trigger: GGGACCCAGAGGTTGCCTCCAGGCTGCTCCTGACGT...AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | AAGTGTGTCTTGTTACAGCAATCACACACAGACACTAACTTCCGCCTGGTAGTATGTACCGGTCAAAGGTaGGAGGGTACTCGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KCVLLQQSHTDTNFRLVVCTGQR*EGTRLQ Trigger: TTGCAGCCGAGTACCCTCCCACCTTTGACCGGTACA...TACTACCAGGCGGAAGTTAGTGTCTGTGTGTGATTGCTGTAACAAGACACACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGTTGTCAGTGGTGTCTTaGTCCCCAACAGGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PVKCCGASGIFLASEVERLSVVS*SPTGLF Trigger: GAACAAGCCTGTTGGGGACCAAGACACCACTGACAA...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | AAGTGTGTCTTGTTACAGCAATCACACACAGACACTAACTTCCGCCTGGTAGTAGGTTCCAGAAACAGCTaGCTCTCCAGTGCTTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KCVLLQQSHTDTNFRLVVGSRNS*LSSAST Trigger: TGTGGAAGCACTGGAGAGGCAGCTGTTTCTGGAACC...TACTACCAGGCGGAAGTTAGTGTCTGTGTGTGATTGCTGTAACAAGACACACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCTACAGAGCTGTGTATGTaGCATCCGAGGGCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CTGDDFSVHQLRSVKIKPTELCM*HPRAPG Trigger: ACCTGGAGCCCTCGGATGCCACATACACAGCTCTGT...AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR GCA 90 bp | TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCTTCCTCTGTGACTGCATaGCCCCTTTGGATGATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTGDDFSVHQLRSVKIKPSSVTA*PLWMIS Trigger: GGAAATCATCCAAAGGGGGCATGCAGTCACAGAGGA...AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CCA 90 bp | TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCTCTTCCTCTGCTGGCATaGCTTTCAACCACTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CTGDDFSVHQLRSVKIKPLPLLA*LSTTAC Trigger: ACAAGCAGTGGTTGAAAGCCATGCCAGCAGAGGAAG...AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GGGGTGGGAGCAAGATGGTCTCTTCCTGGGACGTCAGGAGCAGCCTaGAGGCAACCTCTGGGTCCCCCAGACCACAGTCTCGAGCTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GVGARWSLPGTSGAA*RQPLGPPDHSLELP Trigger: AGGCAGCTCGAGACTGTGGTCTGGGGGACCCAGAGGTTGCCTCCAGGCTGCTCCTGACGTCCCAGGAAGAGACCATCTTGCTCCCACCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | AGGGCTACTGTGTGGCCAGGTTCTGCCGTGGTTTCCACCTCAGGCTaGGTCCTGCTTGTTACCCTGGCCTCAGGAAGGGCTGGTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RATVWPGSAVVSTSG*VLLVTLASGRAGGP Trigger: GGGGCCACCAGCCCTTCCTGAGGCCAGGGTAACAAGCAGGACCCAGCCTGAGGTGGAAACCACGGCAGAACCTGGCCACACAGTAGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACTTGTCATAGCCGCGTGCTCCCCGTGTTCGGTCATCTaGCCCAGGAAGCCTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRLPQQCEGWALVIAACSPCSVI*PRKPSR Trigger: CCTGGAAGGCTTCCTGGGCAAGATGACCGAACACGG...GGAGCACGCGGCTATGACAAGTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GCCATATGCCTGCCCTTTGGGGGTGGGAGCAAGATGGTCTCTTCCTaGGACGTCAGGAGCAGCCTGGAGGCAACCTCTGGGTCCCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: AICLPFGGGSKMVSS*DVRSSLEATSGSPR Trigger: TCTGGGGGACCCAGAGGTTGCCTCCAGGCTGCTCCTGACGTCCCAGGAAGAGACCATCTTGCTCCCACCCCCAAAGGGCAGGCATATGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | TCAGGTACCCGACGCGCCCGCAGCCCCCAATCAGCACCGTGTAGTTaGACTCCAGAGGCTGCAAGCGCTCTTCCTTCAGCATCTGCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTRRARSPQSAPCS*TPEAASALPSASAS Trigger: AGAGGCAGATGCTGAAGGAAGAGCGCTTGCAGCCTCTGGAGTGCAACTACACGGTGCTGATTGGGGGCTGCGGGCGCGTCGGGTACCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | AGGTTTCGAGGCCAGTGGGGTGAGGGCTACTGTGTGGCCAGGTTCTaGCGTGGTTTCCACCTCAGGCTGGGTCCTGCTTGTTACCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RFRGQWGEGYCVARF*RGFHLRLGPACYPG Trigger: GCCAGGGTAACAAGCAGGACCCAGCCTGAGGTGGAAACCACGGCAGAACCTGGCCACACAGTAGCCCTCACCCCACTGGCCTCGAAACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | TCCAAGTGGGTAGGTTTCGAGGCCAGTGGGGTGAGGGCTACTGTGTaGCCAGGTTCTGCCGTGGTTTCCACCTCAGGCTGGGTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SKWVGFEASGVRATV*PGSAVVSTSGWVLL Trigger: AAGCAGGACCCAGCCTGAGGTGGAAACCACGGCAGAACCTGGCCACACAGTAGCCCTCACCCCACTGGCCTCGAAACCTACCCACTTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | TGGAAGTTTCTGGCCTGGAGCTGCTGTCGGAGCTTCAGGGCACTCTaGAGGGCAGAGTCCTTCCAGGGGGACTCCGCACAGACATTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: WKFLAWSCCRSFRAL*RAESFQGDSAQTLN Trigger: GTTCAATGTCTGTGCGGAGTCCCCCTGGAAGGACTCTGCCCTGCAGAGTGCCCTGAAGCTCCGACAGCAGCTCCAGGCCAGAAACTTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GTTCTGCCGTGGTTTCCACCTCAGGCTGGGTCCTGCTTGTTACCCTaGCCTCAGGAAGGGCTGGTGGCCCCTCGAGTTTCTGAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLPWFPPQAGSCLLP*PQEGLVAPRVSEKV Trigger: AACCTTCTCAGAAACTCGAGGGGCCACCAGCCCTTCCTGAGGCCAGGGTAACAAGCAGGACCCAGCCTGAGGTGGAAACCACGGCAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 90 bp | CACTCTGCAGGGCAGAGTCCTTCCAGGGGGACTCCGCACAGACATTaGACAGAGCTGTGTATGTGGCATCCGAGGGCTCCAGGTCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSAGQSPSRGTPHRH*TELCMWHPRAPGLS Trigger: AGAGAGACCTGGAGCCCTCGGATGCCACATACACAGCTCTGTTCAATGTCTGTGCGGAGTCCCCCTGGAAGGACTCTGCCCTGCAGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | AATTTGCCAGAGAGGCTCCCGAAGCTCTCTTCCTCTGCCTCCTCCTaGGGAGCCACAGTGCTGAGCTTACTGGAGTCAGAGCAGAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: NLPERLPKLSSSASS*GATVLSLLESEQRL Trigger: CAGCCTCTGCTCTGACTCCAGTAAGCTCAGCACTGTGGCTCCCCAGGAGGAGGCAGAGGAAGAGAGCTTCGGGAGCCTCTCTGGCAAATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | TTGTACCGGTCAAAGGTGGGAGGGTACTCGGCTGCAAACTCCAGCTaGCGGACGACCACCTCGTTTACTGGGACGCTGTTCTGCCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LYRSKVGGYSAANSS*RTTTSFTGTLFCLM Trigger: CATGAGGCAGAACAGCGTCCCAGTAAACGAGGTGGTCGTCCGCCAGCTGGAGTTTGCAGCCGAGTACCCTCCCACCTTTGACCGGTACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CCTCTGAAGTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACACACCATGCACTGTCTaGGCCTGGACTTTCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLKLKGLPGSPSSVKAGHTPCTV*AWTFLP Trigger: AGGGAGGAAAGTCCAGGCCAAGACAGTGCATGGTGT...GTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAACTTCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 90 bp | AGCTCTCAGCCGTGCAGGTCCCTCCCTGCCTCCTGTCCATCGGGTTaGTCCAACAAGATCCAGGTGTTGAAGGACAGACAGTCCTATGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSQPCRSLPASCPSG*SNKIQVLKDRQSYG Trigger: CCCATAGGACTGTCTGTCCTTCAACACCTGGATCTTGTTGGATCAACCCGATGGACAGGAGGCAGGGAGGGACCTGCACGGCTGAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 90 bp | CACACTTGGCGGCCACCTTCAGCAGGGCATGATACGTTTTCAGGTTaGGCTGGAAGTTTCTGGCCTGGAGCTGCTGTCGGAGCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HTWRPPSAGHDTFSG*AGSFWPGAAVGASG Trigger: CCCTGAAGCTCCGACAGCAGCTCCAGGCCAGAAACTTCCAGCTCAACCTGAAAACGTATCATGCCCTGCTGAAGGTGGCCGCCAAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 90 bp | CACAGCCTGAGGTCTGCACACTTGGCGGCCACCTTCAGCAGGGCATaGTACGTTTTCAGGTTGAGCTGGAAGTTTCTGGCCTGGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: HSLRSAHLAATFSRA*YVFRLSWKFLAWSC Trigger: GCAGCTCCAGGCCAGAAACTTCCAGCTCAACCTGAAAACGTATCATGCCCTGCTGAAGGTGGCCGCCAAGTGTGCAGACCTCAGGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | ACAGTCTCGAGCTGCCTCCAACAGGAGGTTGTAGCCATGCCTACTTaGTTTGATCCCCAGACTCAGCATCTGCCGCCACACCTGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVSSCLQQEVVAMPT*FDPQTQHLPPHLHG Trigger: GCCATGCAGGTGTGGCGGCAGATGCTGAGTCTGGGGATCAAACCAAGTAGGCATGGCTACAACCTCCTGTTGGAGGCAGCTCGAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | AGTGCTTCCACATGTCTGAGTGACACACCATGCACTGTCTTGGCCTaGACTTTCCTCCCTGCCATATGCCTGCCCTTTGGGGGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SASTCLSDTPCTVLA*TFLPAICLPFGGGS Trigger: GCTCCCACCCCCAAAGGGCAGGCATATGGCAGGGAGGAAAGTCCAGGCCAAGACAGTGCATGGTGTGTCACTCAGACATGTGGAAGCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GGGGAGAGAGTTCCAAGACTTAGGAGACTGACTTCCAGCTCCAAGTaGGTAGGTTTCGAGGCCAGTGGGGTGAGGGCTACTGTGTGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GERVPRLRRLTSSSK*VGFEASGVRATVWP Trigger: TGGCCACACAGTAGCCCTCACCCCACTGGCCTCGAAACCTACCCACTTGGAGCTGGAAGTCAGTCTCCTAAGTCTTGGAACTCTCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACTTGTCATAGCCGCGTGCTCCAACAAGATCCAGGTGTaGAAGGACAGACAGTCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PRLPQQCEGWALVIAACSNKIQV*KDRQSY Trigger: ATAGGACTGTCTGTCCTTCAACACCTGGATCTTGTT...GGAGCACGCGGCTATGACAAGTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 90 bp | CTTGTTACCCTGGCCTCAGGAAGGGCTGGTGGCCCCTCGAGTTTCTaGGAAGGTTCCAGAAACAGCTGCCTCTCCAGTGCTTCCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: LVTLASGRAGGPSSF*EGSRNSCLSSASTC Trigger: ACATGTGGAAGCACTGGAGAGGCAGCTGTTTCTGGAACCTTCTCAGAAACTCGAGGGGCCACCAGCCCTTCCTGAGGCCAGGGTAACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | AGAATGGGCTCGTGGCCTCCAGAAAAGGAGGTAAAGACAGCATTGCTCCAGGACCTCCGGGAGGAGAATTaGCCAGAGAGGCTCCCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RMGSWPPEKEVKTALLQDLREEN*PERLPK Trigger: CTTCGGGAGCCTCTCTGGCAAATTCTCCTCCCGGAG...GTCCTGGAGCAATGCTGTCTTTACCTCCTTTTCTGGAGGCCACGAGCCCATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | GTTGAAAGGACTCCCAGGCTCCCCCAGCAGTGTGAAGGCTGGGCACTTGTCATACCTTCTTTGCCAGGATaGGCAACAGTGCCTTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VERTPRLPQQCEGWALVIPSLPG*ATVPWL Trigger: GAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGG...TATGACAAGTGCCCAGCCTTCACACTGCTGGGGGAGCCTGGGAGTCCTTTCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 90 bp | CTCACCACCCTGTTCCTTGAGCTGCAGGTTGTAGAGCTGGGCCGTTaGCTTGTGGAATATCCTCCGGGAGGAGAATTTGCCAGAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTTLFLELQVVELGR*LVEYPPGGEFAREA Trigger: AGCCTCTCTGGCAAATTCTCCTCCCGGAGGATATTCCACAAGTCAACGGCCCAGCTCTACAACCTGCAGCTCAAGGAACAGGGTGGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 90 bp | CTCCCTCCAGGTCTCCCAGTTTGCTCTTTTTCCTTATCAGCGTGTTaGAGAAGGTTACGTCGGCCTCCACCCTATGCCTGTCCAGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: LPPGLPVCSFSLSAC*RRLRRPPPYACPGR Trigger: CCGTCCTGGACAGGCATAGGGTGGAGGCCGACGTAACCTTCTTCAACACGCTGATAAGGAAAAAGAGCAAACTGGGAGACCTGGAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | TGGATGTTAGGGCTCACCTGGGACTTCTTCATGTCTGCAAGCAGCTaGATACCATCCCTGGGCCGATGGCAACCAATGGCCAGATTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WMLGLTWDFFMSASS*IPSLGRWQPMARLQ Trigger: CTGCAATCTGGCCATTGGTTGCCATCGGCCCAGGGATGGTATGCAGCTGCTTGCAGACATGAAGAAGTCCCAGGTGAGCCCTAACATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | GCTGTAGATGTGGATGTTAGGGCTCACCTGGGACTTCTTCATGTCTaGAAGCAGCTGCATACCATCCCTGGGCCGATGGCAACCAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: AVDVDVRAHLGLLHV*KQLHTIPGPMATNG Trigger: GCCATTGGTTGCCATCGGCCCAGGGATGGTATGCAGCTGCTTGCAGACATGAAGAAGTCCCAGGTGAGCCCTAACATCCACATCTACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GTACTCGGCTGCAAACTCCAGCTGGCGGACGACCACCTCGTTTACTaGGACGCTGTTCTGCCTCATGTCCTTCAGGATGCTGATGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: VLGCKLQLADDHLVY*DAVLPHVLQDADEI Trigger: TATCTCATCAGCATCCTGAAGGACATGAGGCAGAACAGCGTCCCAGTAAACGAGGTGGTCGTCCGCCAGCTGGAGTTTGCAGCCGAGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | AAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGACTCCCCTGAGGTCTGCACACTaGGCGGCCACCTTCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KCCGASGIFLASEVERTPLRSAH*AATFSR Trigger: CCTGCTGAAGGTGGCCGCCAAGTGTGCAGACCTCAG...GGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | AAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGACTCCCATTGGCAACAGTGCCTaGGCTCCCTCCAGGTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: KCCGASGIFLASEVERTPIGNSA*APSRSP Trigger: GGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAAT...GGGAGTCCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | CCTTTGGATGATTTCCTTGAAGACATCCAGGCACAGCCTGAGGTCTaGACACTTGGCGGCCACCTTCAGCAGGGCATGATACGTTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: PLDDFLEDIQAQPEV*TLGGHLQQGMIRFQ Trigger: CTGAAAACGTATCATGCCCTGCTGAAGGTGGCCGCCAAGTGTGCAGACCTCAGGCTGTGCCTGGATGTCTTCAAGGAAATCATCCAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GCAGAAAGTCCGAAGATTGGGGACAATTCCCTTCTTTGCCAGGATTaGCAACAGTGCCTTGGCTCCCTCCAGGTCTCCCAGTTTGCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AESPKIGDNSLLCQD*QQCLGSLQVSQFAL Trigger: AAGAGCAAACTGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | TGGGCCGATGGCAACCAATGGCCAGATTGCAGAAAGTCCGAAGATTaGGGACAATTCCCTTCTTTGCCAGGATTGGCAACAGTGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WADGNQWPDCRKSED*GQFPSLPGLATVPW Trigger: CCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCATCGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GACTTCTTCATGTCTGCAAGCAGCTGCATACCATCCCTGGGCCGATaGCAACCAATGGCCAGATTGCAGAAAGTCCGAAGATTGGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DFFMSASSCIPSLGR*QPMARLQKVRRLGT Trigger: TGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCATCGGCCCAGGGATGGTATGCAGCTGCTTGCAGACATGAAGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | GATTGGGGACAATTCCCTTCTTTGCCAGGATTGGCAACAGTGCCTTaGCTCCCTCCAGGTCTCCCAGTTTGCTCTTTTTCCTTATCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: DWGQFPSLPGLATVP*LPPGLPVCSFSLSA Trigger: CGCTGATAAGGAAAAAGAGCAAACTGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGCCACACCTGCATGGCTaGCCGGAAGCCTGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PVKCCGASGIFLASEVERPHLHG*PEACLL Trigger: AAGAAGACAGGCTTCCGGCAAGCCATGCAGGTGTGG...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CCTGTAAAGTGCTGTGGTGCCTCTGGAATATTCTTGGCCTCTGAAGTTGAAAGGAGCAGAGTGAGGGTTTaGATGTCTGGCTGGAGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: PVKCCGASGIFLASEVERSRVRV*MSGWSP Trigger: CGGGCTCCAGCCAGACATCAAAACCCTCACTCTGCT...CCTTTCAACTTCAGAGGCCAAGAATATTCCAGAGGCACCACAGCACTTTACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | CCGAAGATTGGGGACAATTCCCTTCTTTGCCAGGATTGGCAACAGTaGCTTGGCTCCCTCCAGGTCTCCCAGTTTGCTCTTTTTCCTTAT | + |
|
Preference number: 5 (lower is better) Translates to: PKIGDNSLLCQDWQQ*LGSLQVSQFALFPY Trigger: ATAAGGAAAAAGAGCAAACTGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 90 bp | ACAAGCAGAAAACAGAAGGTCTCCTCTGTGACTGCATGCCCCCTTTaGATGATTTCCTTGAAGACATCCAGGCACAGCCTGAGGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TSRKQKVSSVTACPL*MISLKTSRHSLRSA Trigger: TGCAGACCTCAGGCTGTGCCTGGATGTCTTCAAGGAAATCATCCAAAGGGGGCATGCAGTCACAGAGGAGACCTTCTGTTTTCTGCTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCTTTGGTGTAGAGCTGGGCCGTaGACTTGTGGAATATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LALCCRCCVTMIVVRMLWCRAGP*TCGISS Trigger: GGAGGATATTCCACAAGTCAACGGCCCAGCTCTACA...CCAAAGCATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 90 bp | CTTCAGGATGCTGATGAGATAGGTGTAGTCCAACTTCTTGAGGGCTaGGTTGATAAGGGTGCTGTAGATGTGGATGTTAGGGCTCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LQDADEIGVVQLLEG*VDKGAVDVDVRAHL Trigger: CAGGTGAGCCCTAACATCCACATCTACAGCACCCTTATCAACGCAGCCCTCAAGAAGTTGGACTACACCTATCTCATCAGCATCCTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | GCTCTGCAAGGGAGTGTGCAGGGCTGTAGCAGTGTGTTCAAATGTTCTTCTTCTGGACAATTCCCTTCTTaGCCAGGATTGGCAACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALQGSVQGCSSVFKCSSSGQFPS*PGLATV Trigger: CACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCC...AGAAGAAGAACATTTGAACACACTGCTACAGCCCTGCACACTCCCTTGCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CAAATGTTCTTCTTCTGTTTCAGGGTCGCATCATCGAGTGCACACACTGTGGCTGACTGCATGCCCCCTTaGGATGATTTCCTTGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: QMFFFCFRVASSSAHTVADCMPP*DDFLED Trigger: GTCTTCAAGGAAATCATCCAAAGGGGGCATGCAGTC...AGCCACAGTGTGTGCACTCGATGATGCGACCCTGAAACAGAAGAAGAACATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | CTGGCTCTGTGTTGTAGATGCTGTGTGACCATGATCGTTGTCAGGATGCTTTGGCTCTTCTTCATATCATaGAAGAGTCTGAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LALCCRCCVTMIVVRMLWLFFIS*KSLKAF Trigger: GAAGGCTTTCAGACTCTTCAATGATATGAAGAAGAG...CCAAAGCATCCTGACAACGATCATGGTCACACAGCATCTACAACACAGAGCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS-3UTR CAA 90 bp | TGTACAGGTGACGACTTTAGTGTTCACCAGCTGAGATCTGTAAAAATAAAACCTCTTTGGATGATTTCCTaGAAGACATCCAGGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTGDDFSVHQLRSVKIKPLWMIS*KTSRHS Trigger: GCTGTGCCTGGATGTCTTCAAGGAAATCATCCAAAG...AGGTTTTATTTTTACAGATCTCAGCTGGTGAACACTAAAGTCGTCACCTGTACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | CTGGCCTGGAGCTGCTGTCGGAGCTTCAGGGCACTCTaGAGGGCAGAGTCCTTCCAGGGGGACTCCGCACAG | + |
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Preference number: 6 (lower is better) Translates to: LAWSCCRSFRAL*RAESFQGDSAQ Trigger: CTGTGCGGAGTCCCCCTGGAAGGACTCTGCCCTGCAGAGTGCCCTGAAGCTCCGACAGCAGCTCCAGGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | CGACGCGCCCGCAGCCCCCAATCAGCACCGTGTAGTTaGACTCCAGAGGCTGCAAGCGCTCTTCCTTCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRARSPQSAPCS*TPEAASALPSA Trigger: TGCTGAAGGAAGAGCGCTTGCAGCCTCTGGAGTGCAACTACACGGTGCTGATTGGGGGCTGCGGGCGCGTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GGCCAGTGGGGTGAGGGCTACTGTGTGGCCAGGTTCTaGCGTGGTTTCCACCTCAGGCTGGGTCCTGCTTGT | + |
|
Preference number: 6 (lower is better) Translates to: GQWGEGYCVARF*RGFHLRLGPAC Trigger: ACAAGCAGGACCCAGCCTGAGGTGGAAACCACGGCAGAACCTGGCCACACAGTAGCCCTCACCCCACTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | TGTGGCCAGGTTCTGCCGTGGTTTCCACCTCAGGCTGGGTCCTGCTaGTTACCCTGGCCTCAGGAAGGGCTGGTGGCCCCTCGAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CGQVLPWFPPQAGSC*LPWPQEGLVAPRVS Trigger: AGAAACTCGAGGGGCCACCAGCCCTTCCTGAGGCCAGGGTAACAAGCAGGACCCAGCCTGAGGTGGAAACCACGGCAGAACCTGGCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | GCAAGATGGTCTCTTCCTGGGACGTCAGGAGCAGCCTaGAGGCAACCTCTGGGTCCCCCAGACCACAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ARWSLPGTSGAA*RQPLGPPDHSL Trigger: GAGACTGTGGTCTGGGGGACCCAGAGGTTGCCTCCAGGCTGCTCCTGACGTCCCAGGAAGAGACCATCTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | CTGCCATATGCCTGCCCTTTGGGGGTGGGAGCAAGATaGTCTCTTCCTGGGACGTCAGGAGCAGCCTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LPYACPLGVGAR*SLPGTSGAAWR Trigger: CCTCCAGGCTGCTCCTGACGTCCCAGGAAGAGACCATCTTGCTCCCACCCCCAAAGGGCAGGCATATGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | GCAGTGCTCCCAGGCTCCACCACCTCAGCCAGCAGAGTGAGGGTTTaGATGTCTGGCTGGAGCCCGTGTTCGGTCATCTTGCCCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: AVLPGSTTSASRVRV*MSGWSPCSVILPRK Trigger: CTTCCTGGGCAAGATGACCGAACACGGGCTCCAGCCAGACATCAAAACCCTCACTCTGCTGGCTGAGGTGGTGGAGCCTGGGAGCACTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GGCAACCTCTGGGTCCCCCAGACCACAGTCTCGAGCTaGCTCCAACAGGAGGTTGTAGCCATGCCTACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GNLWVPQTTVSS*LQQEVVAMPTW Trigger: CCAAGTAGGCATGGCTACAACCTCCTGTTGGAGGCAGCTCGAGACTGTGGTCTGGGGGACCCAGAGGTTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | GGCCTGGACTTTCCTCCCTGCCATATGCCTGCCCTTTaGGGGTGGGAGCAAGATGGTCTCTTCCTGGGACGT | + |
|
Preference number: 6 (lower is better) Translates to: GLDFPPCHMPAL*GWEQDGLFLGR Trigger: ACGTCCCAGGAAGAGACCATCTTGCTCCCACCCCCAAAGGGCAGGCATATGGCAGGGAGGAAAGTCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | TGGTTTCCACCTCAGGCTGGGTCCTGCTTGTTACCCTaGCCTCAGGAAGGGCTGGTGGCCCCTCGAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: WFPPQAGSCLLP*PQEGLVAPRVS Trigger: AGAAACTCGAGGGGCCACCAGCCCTTCCTGAGGCCAGGGTAACAAGCAGGACCCAGCCTGAGGTGGAAACCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | GACTTCCAGCTCCAAGTGGGTAGGTTTCGAGGCCAGTaGGGTGAGGGCTACTGTGTGGCCAGGTTCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: DFQLQVGRFRGQ*GEGYCVARFCR Trigger: ACGGCAGAACCTGGCCACACAGTAGCCCTCACCCCACTGGCCTCGAAACCTACCCACTTGGAGCTGGAAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | CCGTCCCTAAGGCCGCCAGCCTTGTCAGTGGTGTCTTaGTCCCCAACAGGCTTGTTCTGGAACTCCTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSLRPPALSVVS*SPTGLFWNSCQ Trigger: CTGGCAGGAGTTCCAGAACAAGCCTGTTGGGGACCAAGACACCACTGACAAGGCTGGCGGCCTTAGGGACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | GCACTCTGCAGGGCAGAGTCCTTCCAGGGGGACTCCGCACAGACATaGAACAGAGCTGTGTATGTGGCATCCGAGGGCTCCAGGTCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALCRAESFQGDSAQT*NRAVYVASEGSRSL Trigger: GAGAGACCTGGAGCCCTCGGATGCCACATACACAGCTCTGTTCAATGTCTGTGCGGAGTCCCCCTGGAAGGACTCTGCCCTGCAGAGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 72 bp | GGGCAGAGTCCTTCCAGGGGGACTCCGCACAGACATTaGACAGAGCTGTGTATGTGGCATCCGAGGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GQSPSRGTPHRH*TELCMWHPRAP Trigger: TGGAGCCCTCGGATGCCACATACACAGCTCTGTTCAATGTCTGTGCGGAGTCCCCCTGGAAGGACTCTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 72 bp | CTGGCCTCAGGAAGGGCTGGTGGCCCCTCGAGTTTCTaGGAAGGTTCCAGAAACAGCTGCCTCTCCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LASGRAGGPSSF*EGSRNSCLSSA Trigger: AGCACTGGAGAGGCAGCTGTTTCTGGAACCTTCTCAGAAACTCGAGGGGCCACCAGCCCTTCCTGAGGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | CCATGCCTACTTGGTTTGATCCCCAGACTCAGCATCTaGCGCCACACCTGCATGGCTTGCCGGAAGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PCLLGLIPRLSI*RHTCMACRKPV Trigger: GACAGGCTTCCGGCAAGCCATGCAGGTGTGGCGGCAGATGCTGAGTCTGGGGATCAAACCAAGTAGGCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GGGCTCACCTGGGACTTCTTCATGTCTGCAAGCAGCTaGATACCATCCCTGGGCCGATGGCAACCAATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GLTWDFFMSASS*IPSLGRWQPMA Trigger: GGCCATTGGTTGCCATCGGCCCAGGGATGGTATGCAGCTGCTTGCAGACATGAAGAAGTCCCAGGTGAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | GACTTTCCTCCCTGCCATATGCCTGCCCTTTGGGGGTaGGAGCAAGATGGTCTCTTCCTGGGACGTCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: DFPPCHMPALWG*EQDGLFLGRQE Trigger: CTCCTGACGTCCCAGGAAGAGACCATCTTGCTCCCACCCCCAAAGGGCAGGCATATGGCAGGGAGGAAAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | TCAAAGGTGGGAGGGTACTCGGCTGCAAACTCCAGCTaGCGGACGACCACCTCGTTTACTGGGACGCTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKVGGYSAANSS*RTTTSFTGTLF Trigger: GAACAGCGTCCCAGTAAACGAGGTGGTCGTCCGCCAGCTGGAGTTTGCAGCCGAGTACCCTCCCACCTTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | AGGGCAGAGTCCTTCCAGGGGGACTCCGCACAGACATaGAACAGAGCTGTGTATGTGGCATCCGAGGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAESFQGDSAQT*NRAVYVASEGS Trigger: GGAGCCCTCGGATGCCACATACACAGCTCTGTTCAATGTCTGTGCGGAGTCCCCCTGGAAGGACTCTGCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | CCAGGCTCCACCACCTCAGCCAGCAGAGTGAGGGTTTaGATGTCTGGCTGGAGCCCGTGTTCGGTCATCTTG | + |
|
Preference number: 6 (lower is better) Translates to: PGSTTSASRVRV*MSGWSPCSVIL Trigger: CAAGATGACCGAACACGGGCTCCAGCCAGACATCAAAACCCTCACTCTGCTGGCTGAGGTGGTGGAGCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | CAGCTCTCAGCCGTGCAGGTCCCTCCCTGCCTCCTGTCCATCGGGTaGATCCAACAAGATCCAGGTGTTGAAGGACAGACAGTCCTATGG | + |
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Preference number: 6 (lower is better) Translates to: QLSAVQVPPCLLSIG*IQQDPGVEGQTVLW Trigger: CCATAGGACTGTCTGTCCTTCAACACCTGGATCTTGTTGGATCAACCCGATGGACAGGAGGCAGGGAGGGACCTGCACGGCTGAGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 72 bp | CCGTGCAGGTCCCTCCCTGCCTCCTGTCCATCGGGTTaGTCCAACAAGATCCAGGTGTTGAAGGACAGACAG | + |
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Preference number: 6 (lower is better) Translates to: PCRSLPASCPSG*SNKIQVLKDRQ Trigger: CTGTCTGTCCTTCAACACCTGGATCTTGTTGGATCAACCCGATGGACAGGAGGCAGGGAGGGACCTGCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GTTTTCAGGTTGAGCTGGAAGTTTCTGGCCTGGAGCTaGTGTCGGAGCTTCAGGGCACTCTGCAGGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: VFRLSWKFLAWS*CRSFRALCRAE Trigger: CTCTGCCCTGCAGAGTGCCCTGAAGCTCCGACAGCAGCTCCAGGCCAGAAACTTCCAGCTCAACCTGAAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | CACACCATGCACTGTCTTGGCCTGGACTTTCCTCCCTaGCATATGCCTGCCCTTTGGGGGTGGGAGCAAGAT | + |
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Preference number: 6 (lower is better) Translates to: HTMHCLGLDFPP*HMPALWGWEQD Trigger: ATCTTGCTCCCACCCCCAAAGGGCAGGCATATGGCAGGGAGGAAAGTCCAGGCCAAGACAGTGCATGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | TCCTTTGTACCGGTCAAAGGTGGGAGGGTACTCGGCTaGAAACTCCAGCTGGCGGACGACCACCTCGTTTAC | + |
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Preference number: 6 (lower is better) Translates to: SFVPVKGGRVLG*KLQLADDHLVY Trigger: GTAAACGAGGTGGTCGTCCGCCAGCTGGAGTTTGCAGCCGAGTACCCTCCCACCTTTGACCGGTACAAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | CACCACCTCAGCCAGCAGAGTGAGGGTTTTGATGTCTaGCTGGAGCCCGTGTTCGGTCATCTTGCCCAGGAA | + |
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Preference number: 6 (lower is better) Translates to: HHLSQQSEGFDV*LEPVFGHLAQE Trigger: TTCCTGGGCAAGATGACCGAACACGGGCTCCAGCCAGACATCAAAACCCTCACTCTGCTGGCTGAGGTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | GCCGTGCAGGTCCCTCCCTGCCTCCTGTCCATCGGGTaGATCCAACAAGATCCAGGTGTTGAAGGACAGACA | + |
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Preference number: 6 (lower is better) Translates to: AVQVPPCLLSIG*IQQDPGVEGQT Trigger: TGTCTGTCCTTCAACACCTGGATCTTGTTGGATCAACCCGATGGACAGGAGGCAGGGAGGGACCTGCACGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | CAGAAGGTCTCCTCTGTGACTGCATGCCCCCTTTGGATGATTTCCTaGAAGACATCCAGGCACAGCCTGAGGTCTGCACACTTGGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: QKVSSVTACPLWMIS*KTSRHSLRSAHLAA Trigger: GGCCGCCAAGTGTGCAGACCTCAGGCTGTGCCTGGATGTCTTCAAGGAAATCATCCAAAGGGGGCATGCAGTCACAGAGGAGACCTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | CTCTCCAGTGCTTCCACATGTCTGAGTGACACACCATGCACTGTCTaGGCCTGGACTTTCCTCCCTGCCATATGCCTGCCCTTTGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: LSSASTCLSDTPCTV*AWTFLPAICLPFGG Trigger: ACCCCCAAAGGGCAGGCATATGGCAGGGAGGAAAGTCCAGGCCAAGACAGTGCATGGTGTGTCACTCAGACATGTGGAAGCACTGGAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 72 bp | CGGCCACCTTCAGCAGGGCATGATACGTTTTCAGGTTaGGCTGGAAGTTTCTGGCCTGGAGCTGCTGTCGGA | + |
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Preference number: 6 (lower is better) Translates to: RPPSAGHDTFSG*AGSFWPGAAVG Trigger: TCCGACAGCAGCTCCAGGCCAGAAACTTCCAGCTCAACCTGAAAACGTATCATGCCCTGCTGAAGGTGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GTGGATGTTAGGGCTCACCTGGGACTTCTTCATGTCTaGAAGCAGCTGCATACCATCCCTGGGCCGATGGCA | + |
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Preference number: 6 (lower is better) Translates to: VDVRAHLGLLHV*KQLHTIPGPMA Trigger: TGCCATCGGCCCAGGGATGGTATGCAGCTGCTTGCAGACATGAAGAAGTCCCAGGTGAGCCCTAACATCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | AGCTGCCTCCAACAGGAGGTTGTAGCCATGCCTACTTaGTTTGATCCCCAGACTCAGCATCTGCCGCCACAC | + |
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Preference number: 6 (lower is better) Translates to: SCLQQEVVAMPT*FDPQTQHLPPH Trigger: GTGTGGCGGCAGATGCTGAGTCTGGGGATCAAACCAAGTAGGCATGGCTACAACCTCCTGTTGGAGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | CCGAAGATTGGGGACAATTCCCTTCTTTGCCAGGATTaGCAACAGTGCCTTGGCTCCCTCCAGGTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PKIGDNSLLCQD*QQCLGSLQVSQ Trigger: CTGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | TGCAAACTCCAGCTGGCGGACGACCACCTCGTTTACTaGGACGCTGTTCTGCCTCATGTCCTTCAGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: CKLQLADDHLVY*DAVLPHVLQDA Trigger: AGCATCCTGAAGGACATGAGGCAGAACAGCGTCCCAGTAAACGAGGTGGTCGTCCGCCAGCTGGAGTTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | GCCGTTGACTTGTGGAATATCCTCCGGGAGGAGAATTaGCCAGAGAGGCTCCCGAAGCTCTCTTCCTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: AVDLWNILREEN*PERLPKLSSSA Trigger: GGCAGAGGAAGAGAGCTTCGGGAGCCTCTCTGGCAAATTCTCCTCCCGGAGGATATTCCACAAGTCAACGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | GCTCCCTCCAGGTCTCCCAGTTTGCTCTTTTTCCTTATCAGCGTGTaGAAGAAGGTTACGTCGGCCTCCACCCTATGCCTGTCCAGGACG | + |
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Preference number: 6 (lower is better) Translates to: APSRSPSLLFFLISV*KKVTSASTLCLSRT Trigger: CGTCCTGGACAGGCATAGGGTGGAGGCCGACGTAACCTTCTTCAACACGCTGATAAGGAAAAAGAGCAAACTGGGAGACCTGGAGGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 72 bp | AGGTCTGCACACTTGGCGGCCACCTTCAGCAGGGCATaGTACGTTTTCAGGTTGAGCTGGAAGTTTCTGGCC | + |
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Preference number: 6 (lower is better) Translates to: RSAHLAATFSRA*YVFRLSWKFLA Trigger: GGCCAGAAACTTCCAGCTCAACCTGAAAACGTATCATGCCCTGCTGAAGGTGGCCGCCAAGTGTGCAGACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | CACTCCAGAGGCTGCAAGCGCTCTTCCTTCAGCATCTaGCTCTCAAACAGATCCAGGGCCTCTGCAAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: HSRGCKRSSFSI*LSNRSRASASF Trigger: AAAGCTTGCAGAGGCCCTGGATCTGTTTGAGAGGCAGATGCTGAAGGAAGAGCGCTTGCAGCCTCTGGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GATTTCCTTGAAGACATCCAGGCACAGCCTGAGGTCTaGACACTTGGCGGCCACCTTCAGCAGGGCATGATA | + |
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Preference number: 6 (lower is better) Translates to: DFLEDIQAQPEV*TLGGHLQQGMI Trigger: TATCATGCCCTGCTGAAGGTGGCCGCCAAGTGTGCAGACCTCAGGCTGTGCCTGGATGTCTTCAAGGAAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | CAACAAGATCCAGGTGTTGAAGGACAGACAGTCCTATaGGGCGGGGACCGGAAAAGAGCCGGGAGAGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: QQDPGVEGQTVL*GGDRKRAGRVL Trigger: TAAGACTCTCCCGGCTCTTTTCCGGTCCCCGCCCCATAGGACTGTCTGTCCTTCAACACCTGGATCTTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | ACCTGCATGGCTTGCCGGAAGCCTGTCTTCTTGTCCTaGATGCAGCCCACAAGCAGAAAACAGAAGGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TCMACRKPVFLS*MQPTSRKQKVS Trigger: GGAGACCTTCTGTTTTCTGCTTGTGGGCTGCATCCAGGACAAGAAGACAGGCTTCCGGCAAGCCATGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | GTTCCAAGACTTAGGAGACTGACTTCCAGCTCCAAGTaGGTAGGTTTCGAGGCCAGTGGGGTGAGGGCTACT | + |
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Preference number: 6 (lower is better) Translates to: VPRLRRLTSSSK*VGFEASGVRAT Trigger: AGTAGCCCTCACCCCACTGGCCTCGAAACCTACCCACTTGGAGCTGGAAGTCAGTCTCCTAAGTCTTGGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | TCCGAAGATTGGGGACAATTCCCTTCTTTGCCAGGATaGGCAACAGTGCCTTGGCTCCCTCCAGGTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SEDWGQFPSLPG*ATVPWLPPGLP Trigger: TGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | GCCAGGATTGGCAACAGTGCCTTGGCTCCCTCCAGGTCTCCCAGTTaGCTCTTTTTCCTTATCAGCGTGTTGAAGAAGGTTACGTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: ARIGNSALAPSRSPS*LFFLISVLKKVTSA Trigger: GGCCGACGTAACCTTCTTCAACACGCTGATAAGGAAAAAGAGCAAACTGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | TGGCCAGATTGCAGAAAGTCCGAAGATTGGGGACAATTCCCTTCTTaGCCAGGATTGGCAACAGTGCCTTGGCTCCCTCCAGGTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: WPDCRKSEDWGQFPS*PGLATVPWLPPGLP Trigger: TGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | AGCAGCTGCATACCATCCCTGGGCCGATGGCAACCAATGGCCAGATaGCAGAAAGTCCGAAGATTGGGGACAATTCCCTTCTTTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SSCIPSLGRWQPMAR*QKVRRLGTIPFFAR Trigger: CCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCATCGGCCCAGGGATGGTATGCAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 72 bp | CTGTTCCTTGAGCTGCAGGTTGTAGAGCTGGGCCGTTaGCTTGTGGAATATCCTCCGGGAGGAGAATTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LFLELQVVELGR*LVEYPPGGEFA Trigger: GGCAAATTCTCCTCCCGGAGGATATTCCACAAGTCAACGGCCCAGCTCTACAACCTGCAGCTCAAGGAACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | CTCTCCAGTGCTTCCACATGTCTGAGTGACACACCATaGACTGTCTTGGCCTGGACTTTCCTCCCTGCCATA | + |
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Preference number: 6 (lower is better) Translates to: LSSASTCLSDTP*TVLAWTFLPAI Trigger: TATGGCAGGGAGGAAAGTCCAGGCCAAGACAGTGCATGGTGTGTCACTCAGACATGTGGAAGCACTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GCAGAAAGTCCGAAGATTGGGGACAATTCCCTTCTTTaGCAGGATTGGCAACAGTGCCTTGGCTCCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: AESPKIGDNSLL*QDWQQCLGSLQ Trigger: CTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | ATGTCTGCAAGCAGCTGCATACCATCCCTGGGCCGATaGCAACCAATGGCCAGATTGCAGAAAGTCCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: MSASSCIPSLGR*QPMARLQKVRR Trigger: TCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCATCGGCCCAGGGATGGTATGCAGCTGCTTGCAGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | TCCTCTGTGACTGCATGCCCCCTTTGGATGATTTCCTaGAAGACATCCAGGCACAGCCTGAGGTCTGCACAC | + |
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Preference number: 6 (lower is better) Translates to: SSVTACPLWMIS*KTSRHSLRSAH Trigger: GTGTGCAGACCTCAGGCTGTGCCTGGATGTCTTCAAGGAAATCATCCAAAGGGGGCATGCAGTCACAGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | TGCAGAAAGTCCGAAGATTGGGGACAATTCCCTTCTTTGCCAGGATaGGCAACAGTGCCTTGGCTCCCTCCAGGTCTCCCAGTTTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: CRKSEDWGQFPSLPG*ATVPWLPPGLPVCS Trigger: AGAGCAAACTGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | CTGGGCCGATGGCAACCAATGGCCAGATTGCAGAAAGTCCGAAGATaGGGGACAATTCCCTTCTTTGCCAGGATTGGCAACAGTGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LGRWQPMARLQKVRR*GTIPFFARIGNSAL Trigger: CAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCATCGGCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | TACCATCCCTGGGCCGATGGCAACCAATGGCCAGATTaGAGAAAGTCCGAAGATTGGGGACAATTCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: YHPWADGNQWPD*RKSEDWGQFPS Trigger: AGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCATCGGCCCAGGGATGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | CAATTCCCTTCTTTGCCAGGATTGGCAACAGTGCCTTaGCTCCCTCCAGGTCTCCCAGTTTGCTCTTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: QFPSLPGLATVP*LPPGLPVCSFS Trigger: GGAAAAAGAGCAAACTGGGAGACCTGGAGGGAGCCAAGGCACTGTTGCCAATCCTGGCAAAGAAGGGAATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | ATACCATCCCTGGGCCGATGGCAACCAATGGCCAGATaGCAGAAAGTCCGAAGATTGGGGACAATTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: IPSLGRWQPMAR*QKVRRLGTIPF Trigger: GAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCATCGGCCCAGGGATGGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 90 bp | CACAAGCAGAAAACAGAAGGTCTCCTCTGTGACTGCATGCCCCCTTaGGATGATTTCCTTGAAGACATCCAGGCACAGCCTGAGGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: HKQKTEGLLCDCMPP*DDFLEDIQAQPEVC Trigger: GCAGACCTCAGGCTGTGCCTGGATGTCTTCAAGGAAATCATCCAAAGGGGGCATGCAGTCACAGAGGAGACCTTCTGTTTTCTGCTTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS TCA 72 bp | GGTCTCCCAGTTTGCTCTTTTTCCTTATCAGCGTGTTaGAGAAGGTTACGTCGGCCTCCACCCTATGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GLPVCSFSLSAC*RRLRRPPPYAC Trigger: ACAGGCATAGGGTGGAGGCCGACGTAACCTTCTTCAACACGCTGATAAGGAAAAAGAGCAAACTGGGAGACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CCA 72 bp | GGCAACCAATGGCCAGATTGCAGAAAGTCCGAAGATTaGGGACAATTCCCTTCTTTGCCAGGATTGGCAACA | + |
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Preference number: 6 (lower is better) Translates to: GNQWPDCRKSED*GQFPSLPGLAT Trigger: TGTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS CAA 72 bp | TGGCAACCAATGGCCAGATTGCAGAAAGTCCGAAGATaGGGGACAATTCCCTTCTTTGCCAGGATTGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: WQPMARLQKVRR*GTIPFFARIGN Trigger: GTTGCCAATCCTGGCAAAGAAGGGAATTGTCCCCAATCTTCGGACTTTCTGCAATCTGGCCATTGGTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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| CDS GCA 72 bp | GCTGATGAGATAGGTGTAGTCCAACTTCTTGAGGGCTaGGTTGATAAGGGTGCTGTAGATGTGGATGTTAGG | + |
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Preference number: 6 (lower is better) Translates to: ADEIGVVQLLEG*VDKGAVDVDVR Trigger: CCTAACATCCACATCTACAGCACCCTTATCAACGCAGCCCTCAAGAAGTTGGACTACACCTATCTCATCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031628.10 |
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