Pregenerated sensors for PTBP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028134Ensembl transcript IDs: ENSMUST00000029780.12, ENSMUST00000195902.2, ENSMUST00000197387.5, ENSMUST00000197464.5, ENSMUST00000197833.5, ENSMUST00000198403.2, ENSMUST00000200097.5
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGTTACTATGACACTCCTAGCAAAAGGCGCACTGAACTGTGTGCATaGACAAGGCTACCCACTGTCTTTGCAAGGTCACAGTTTACAACC | + |
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Preference number: 1 (lower is better) Translates to: SYYDTPSKRRTELCA*TRLPTVFARSQFTT Trigger: GGTTGTAAACTGTGACCTTGCAAAGACAGTGGGTAGCCTTGTGCATGCACACAGTTCAGTGCGCCTTTTGCTAGGAGTGTCATAGTAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| 3UTR GCA 90 bp | AAAATACATGCACCAGTTCCTGAACTAGCTAGACCAGTCTGCACATaGTCAGAAATCCACAACCATTTTCCAAATCTTAATTACAAACTA | + |
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Preference number: 1 (lower is better) Translates to: KIHAPVPELARPVCT*SEIHNHFPNLNYKL Trigger: TAGTTTGTAATTAAGATTTGGAAAATGGTTGTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR GCA 90 bp | CTTCTTTACATCCTAACACTGTTTTCTATCAAGAAAGTGCAGAGATaGTGTATTGCAATCATGCCATTATCACTAACAGAGCTGTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LLYILTLFSIKKVQR*CIAIMPLSLTELFA Trigger: AGCAAACAGCTCTGTTAGTGATAATGGCATGATTGCAATACAGCATCTCTGCACTTTCTTGATAGAAAACAGTGTTAGGATGTAAAGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTCACAGTGCCCCCGGTGTTGGCAAACAGAGTTCGCAGATCCTCTTCTGCTCTTTTGTTAGCCCTTaGTCATCAAGTCCCTCTCGA | + |
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Preference number: 2 (lower is better) Translates to: CFHSAPGVGKQSSQILFCSFVSP*SSSPSR Trigger: TCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGA...GCAGAAGAGGATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGTGAAAGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR-3UTR GCA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGCTAGCTAGACCAGTCTaGACATGCTCAGAAATCCAC | + |
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Preference number: 2 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWLARPV*TCSEIH Trigger: GTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAG...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR TCA 90 bp | GTGTGCATGCACAAGGCTACCCACTGTCTTTGCAAGGTCACAGTTTACAACCAAAGCCTATGTTACAGTTaGCTAGAGCTACAGTTGTTC | + |
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Preference number: 2 (lower is better) Translates to: VCMHKATHCLCKVTVYNQSLCYS*LELQLF Trigger: GAACAACTGTAGCTCTAGTCAACTGTAACATAGGCT...TTGGTTGTAAACTGTGACCTTGCAAAGACAGTGGGTAGCCTTGTGCATGCACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| 3UTR-3UTR GCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACACTAGCTAGACCAGTCTaGACATGCTCAGAAATCCAC | + |
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Preference number: 2 (lower is better) Translates to: DSITPFPPWQSKHELRSTLARPV*TCSEIH Trigger: GTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAG...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCGTGCTGACATTTATATaGCACGTCCCACAAGAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: CDSITPFPPWQSKHELRSVLTFI*HVPQEC Trigger: ACACTCTTGTGGGACGTGTCATATAAATGTCAGCAC...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR TCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATGGGATGTTAGACAGGTaGAGGGTAGCAGAAGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: VIIMKINQSLNSFLHCCHGMLDR*RVAEGG Trigger: CCCTCCTTCTGCTACCCTTCACCTGTCTAACATCCC...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCGGGATGTTAGACAGGTaGAGGGTAGCAGAAGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: KVIIMKINQSLNSFLHCCGMLDR*RVAEGG Trigger: CCCTCCTTCTGCTACCCTTCACCTGTCTAACATCCC...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCATGGCGAGCTGGGACTaGTTCCCATCAGCCATCTGT | + |
|
Preference number: 2 (lower is better) Translates to: KVIIMKINQSLNSFLHCCMASWD*FPSAIC Trigger: ACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCAT...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCAGTGCCCCCGGTGTTaGCAAACAGAGTTCGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: KVIIMKINQSLNSFLHCCQCPRC*QTEFAD Trigger: ATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTG...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR-3UTR CCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATCAGTGCCCCCGGTGTTaGCAAACAGAGTTCGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: VIIMKINQSLNSFLHCCHQCPRC*QTEFAD Trigger: ATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTG...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR-3UTR TCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCAAATGGCTTCCCTATTaGACAGATGAAACACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: CDSITPFPPWQSKHELRSKWLPY*TDETQQ Trigger: CTGCTGTGTTTCATCTGTTCAATAGGGAAGCCATTT...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCTCCCACATAACGATGTaGCCTAAACAACCAATTCCT | + |
|
Preference number: 2 (lower is better) Translates to: CDSITPFPPWQSKHELRSSHITM*PKQPIP Trigger: AGGAATTGGTTGTTTAGGGCACATCGTTATGTGGGA...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR TCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACATCTAGACCAGATTTGTaGGATACAAAAGGCCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: DSITPFPPWQSKHELRSTSRPDL*DTKGQC Trigger: ACATTGGCCTTTTGTATCTCACAAATCTGGTCTAGA...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR CCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAAACTTTGGTCCCACCTaGTTGTCAGTTTTAGAAAAC | + |
|
Preference number: 2 (lower is better) Translates to: DSITPFPPWQSKHELRSTNFGPT*LSVLEN Trigger: GTTTTCTAAAACTGACAACCAGGTGGGACCAAAGTT...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR TCA 90 bp | GCCACAAACAAGACATTACTTAGTGCTGACATTTATATGACACGTCCCACAAGATCCCTATTGAACAGATaGAACACAGCAGTTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: ATNKTLLSADIYMTRPTRSLLNR*NTAVSN Trigger: GTTGCTAACTGCTGTGTTTCATCTGTTCAATAGGGA...TCTTGTGGGACGTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR TCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATGGAGGGAAAATGTTCTaGAAGTTTTTGGATCCCGGT | + |
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Preference number: 2 (lower is better) Translates to: VIIMKINQSLNSFLHCCHGGKMF*KFLDPG Trigger: ACCGGGATCCAAAAACTTTCAGAACATTTTCCCTCC...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR GCA 72 bp | GACACTCCTAGCAAAAGGCGCACTGAACTGTGTGCATaGACAAGGCTACCCACTGTCTTTGCAAGGTCACAG | + |
|
Preference number: 3 (lower is better) Translates to: DTPSKRRTELCA*TRLPTVFARSQ Trigger: CTGTGACCTTGCAAAGACAGTGGGTAGCCTTGTGCATGCACACAGTTCAGTGCGCCTTTTGCTAGGAGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| 3UTR-3UTR CAA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGTTTGGTCCCACCTGGTaGTCAGTTTTAGAAAACTGC | + |
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Preference number: 3 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWFGPTW*SVLENC Trigger: GCAGTTTTCTAAAACTGACAACCAGGTGGGACCAAA...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR-3UTR CAA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATACAGTGCCCCCGGTGTaGGCAAACAGAGTTCGCAGA | + |
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Preference number: 3 (lower is better) Translates to: VIIMKINQSLNSFLHCCHTVPPV*ANRVRR Trigger: TCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGT...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR TCA 72 bp | CGAATAATTTTTCCATACATCTTCTGCCCATTAAGATaGTTCATGGCGAGCTGGGACTGGTTCCCATCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RIIFPYIFCPLR*FMASWDWFPSA Trigger: GGCTGATGGGAACCAGTCCCAGCTCGCCATGAATCATCTTAATGGGCAGAAGATGTATGGAAAAATTATTCG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| 3UTR-3UTR CAA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACATTTGGTCCCACCTGGTaGTCAGTTTTAGAAAACTGC | + |
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Preference number: 3 (lower is better) Translates to: DSITPFPPWQSKHELRSTFGPTW*SVLENC Trigger: GCAGTTTTCTAAAACTGACAACCAGGTGGGACCAAA...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR GCA 72 bp | ATACATGCACCAGTTCCTGAACTAGCTAGACCAGTCTaGACATGCTCAGAAATCCACAACCATTTTCCAAAT | + |
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Preference number: 3 (lower is better) Translates to: IHAPVPELARPV*TCSEIHNHFPN Trigger: ATTTGGAAAATGGTTGTGGATTTCTGAGCATGTGCAGACTGGTCTAGCTAGTTCAGGAACTGGTGCATGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR GCA 72 bp | CACAAGAGTGTGTACAAAAAGGTTAAGGTTCCACAATaGTTTCCACATAGGGCTCAAACTTACAGAAATCAC | + |
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Preference number: 3 (lower is better) Translates to: HKSVYKKVKVPQ*FPHRAQTYRNH Trigger: GTGATTTCTGTAAGTTTGAGCCCTATGTGGAAAGCATTGTGGAACCTTAACCTTTTTGTACACACTCTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| 3UTR GCA 72 bp | TATTGCAATCATGCCATTATCACTAACAGAGCTGTTTaGTACTGGAAGCATGGTTACTGGCCAAATCTGATA | + |
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Preference number: 3 (lower is better) Translates to: YCNHAIITNRAV*YWKHGYWPNLI Trigger: TATCAGATTTGGCCAGTAACCATGCTTCCAGTAGCAAACAGCTCTGTTAGTGATAATGGCATGATTGCAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| 3UTR TCA 72 bp | AGAAGCAAAGGGATTTATAAATTTTCAACAGCATCATaGCAAAGGGGTAACCTTGCTTCTCTACGGTTTCGT | + |
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Preference number: 3 (lower is better) Translates to: RSKGIYKFSTAS*QRGNLASLRFR Trigger: ACGAAACCGTAGAGAAGCAAGGTTACCCCTTTGTCATGATGCTGTTGAAAATTTATAAATCCCTTTGCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| 3UTR GCA 72 bp | TGTGCCCTAAACAACCAATTCCTTTTTCCTAGTAAATaGAGAATAGCAACACTAGTTTTCCTTTGTAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: CALNNQFLFPSK*RIATLVFLCKA Trigger: TGCCTTACAAAGGAAAACTAGTGTTGCTATTCTGCATTTACTAGGAAAAAGGAATTGGTTGTTTAGGGCACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | GATTCATGGCGAGCTGGGACTGGTTCCCATCAGCCATCTGTATCAGAGCACTGTTGTATTGCCACCAGCTaGGACTCCAGGCATGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: DSWRAGTGSHQPSVSEHCCIATS*DSRHAH Trigger: GTGGGCATGCCTGGAGTCTCAGCTGGTGGCAATACA...ACAGTGCTCTGATACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCATGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| CDS-3UTR GCA 90 bp | TGCTTTCACAGTGCCCCCGGTGTTGGCAAACAGAGTTCGCAGATCCTCTTCTGCAGCGGCAGCAGCTGCTaGAGCAGCATTTGGAATAGC | + |
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Preference number: 4 (lower is better) Translates to: CFHSAPGVGKQSSQILFCSGSSC*SSIWNS Trigger: GCTATTCCAAATGCTGCTGCAGCAGCTGCTGCCGCT...GCAGAAGAGGATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGTGAAAGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR GCA 90 bp | TGCTTTCACAGTGCCCCCGGTGTTGGCAAACAGAGTTCGCAGATCCTCTTCTGCCCAACAGGACTGTATTaGCACCAGCTGAGACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: CFHSAPGVGKQSSQILFCPTGLY*HQLRLQ Trigger: CTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGG...GCAGAAGAGGATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGTGAAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| CDS-3UTR CCA 90 bp | TGCTTTCACAGTGCCCCCGGTGTTGGCAAACAGAGTTCGCAGATCCTCTTCTGCCAAATGCTGCAGCAATaGCTGGGTCTAACGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: CFHSAPGVGKQSSQILFCQMLQQ*LGLTQA Trigger: AGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTG...GCAGAAGAGGATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGTGAAAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR GCA 90 bp | GATTCATGGCGAGCTGGGACTGGTTCCCATCAGCCATCTGTATCAGAGCACTGTTGTCTCCTTGGCAAATaGTGCAGCAATGGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: DSWRAGTGSHQPSVSEHCCLLGK*CSNGWV Trigger: GACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACA...ACAGTGCTCTGATACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCATGAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR CCA 90 bp | TGCTTTCACAGTGCCCCCGGTGTTGGCAAACAGAGTTCGCAGATCCTCTTCTGCGTAGGGATGTCTCCTTaGCAAATGCTGCAGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: CFHSAPGVGKQSSQILFCVGMSP*QMLQQW Trigger: CCATTGCTGCAGCATTTGCCAAGGAGACATCCCTAC...GCAGAAGAGGATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGTGAAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR TCA 90 bp | GATTCATGGCGAGCTGGGACTGGTTCCCATCAGCCATCTGTATCAGAGCACTGTGGTAACTTTCGAATGTaGAGTACACGAGAGGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: DSWRAGTGSHQPSVSEHCGNFRM*STREGA Trigger: GGCTCCCTCTCGTGTACTTCACATTCGAAAGTTACC...ACAGTGCTCTGATACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCATGAATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR TCA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGTGTATTGCCACCAGCTaGGACTCCAGGCATGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWCIATS*DSRHAH Trigger: GTGGGCATGCCTGGAGTCTCAGCTGGTGGCAATACA...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | ACTGTGTGCATGCACAAGGCTACCCACTGTCTTTGCAAGGTCACAGTTTACAACCTAAGTACTGGACTCTaGGCTGGAGTCACCGCACTC | + |
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Preference number: 4 (lower is better) Translates to: TVCMHKATHCLCKVTVYNLSTGL*AGVTAL Trigger: GAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAG...GTTGTAAACTGTGACCTTGCAAAGACAGTGGGTAGCCTTGTGCATGCACACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS-3UTR CCA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGCAGTGCCCCCGGTGTTaGCAAACAGAGTTCGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWQCPRC*QTEFAD Trigger: ATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTG...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCTGTATTGCCACCAGCTaGGACTCCAGGCATGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSCIATS*DSRHAH Trigger: GTGGGCATGCCTGGAGTCTCAGCTGGTGGCAATACA...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR GCA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGTGTCTCCTTGGCAAATaGTGCAGCAATGGCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWCLLGK*CSNGWV Trigger: GACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACA...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR GCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGGCAGCGGCAGCAGCTaGTGCAGCAGCATTTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTGSGSS*CSSIWN Trigger: ATTCCAAATGCTGCTGCAGCAGCTGCTGCCGCTGCC...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTCAGTGCCCCCGGTGTTaGCAAACAGAGTTCGCAGAT | + |
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Preference number: 4 (lower is better) Translates to: FSEQSIGDDTNNGICPPSQCPRC*QTEFAD Trigger: ATCTGCGAACTCTGTTTGCCAACACCGGGGGCACTG...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTGCTAGCTTGGCTTGTTaGGCGTTTACCGGATCACCA | + |
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Preference number: 4 (lower is better) Translates to: FSEQSIGDDTNNGICPPSASLAC*AFTGSP Trigger: TGGTGATCCGGTAAACGCTCAACAAGCCAAGCTAGC...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCGGGATGTTAGACAGGTaGAGGGTAGCAGAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSGMLDR*RVAEGG Trigger: CCCTCCTTCTGCTACCCTTCACCTGTCTAACATCCC...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR TCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGGGATGTTAGACAGGTaGAGGGTAGCAGAAGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTGMLDR*RVAEGG Trigger: CCCTCCTTCTGCTACCCTTCACCTGTCTAACATCCC...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR GCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCAGCGGCAGCAGCTGCTaGAGCAGCATTTGGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSSGSSC*SSIWNS Trigger: GCTATTCCAAATGCTGCTGCAGCAGCTGCTGCCGCT...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | GATTCATGGCGAGCTGGGACTGGTTCCCATCAGCCATCTGTATCAGAGCACTGTAATTATTCTAAGTACTaGACTCTGGGCTGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSWRAGTGSHQPSVSEHCNYSKY*TLGWSH Trigger: GTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATT...ACAGTGCTCTGATACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCATGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTCAAATGCTGCAGCAATaGCTGGGTCTAACGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSEQSIGDDTNNGICPPSQMLQQ*LGLTQA Trigger: AGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTG...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGGTAGGGATGTCTCCTTaGCAAATGCTGCAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWVGMSP*QMLQQW Trigger: CCATTGCTGCAGCATTTGCCAAGGAGACATCCCTAC...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCATGGCGAGCTGGGACTaGTTCCCATCAGCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSMASWD*FPSAIC Trigger: ACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCAT...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAATGGCGAGCTGGGACTaGTTCCCATCAGCCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTMASWD*FPSAIC Trigger: ACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCAT...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | ACTGTGTGCATGCACAAGGCTACCCACTGTCTTTGCAAGGTCACAGTTTACAACCCCGACTTACTAGCTTaGCTTGTTGAGCGTTTACCG | + |
|
Preference number: 4 (lower is better) Translates to: TVCMHKATHCLCKVTVYNPDLLA*LVERLP Trigger: CGGTAAACGCTCAACAAGCCAAGCTAGTAAGTCGGG...GTTGTAAACTGTGACCTTGCAAAGACAGTGGGTAGCCTTGTGCATGCACACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
||
| CDS-3UTR CCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACCTAAGTACTGGACTCTaGGCTGGAGTCACCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNLSTGL*AGVTAL Trigger: GAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAG...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACACTGGCCGTCTCCAGATaGCAGATCAGGTCGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTLAVSR*QIRSSI Trigger: TATACTCGACCTGATCTGCCATCTGGAGACGGCCAG...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCCAAATGCTGCAGCAATaGCTGGGTCTAACGCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSQMLQQ*LGLTQA Trigger: AGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTG...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR TCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCGGTAACTTTCGAATGTaGAGTACACGAGAGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSGNFRM*STREGA Trigger: GGCTCCCTCTCGTGTACTTCACATTCGAAAGTTACC...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACACCGCTGTCACAGCTTaGAGAACTACTTGCGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNTAVTA*RTTCAR Trigger: ACGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGT...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR TCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACGCTAGCTTGGCTTGTTaGGCGTTTACCGGATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNASLAC*AFTGSP Trigger: TGGTGATCCGGTAAACGCTCAACAAGCCAAGCTAGC...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGTCTTTTGTTAGCCCTTaGTCATCAAGTCCCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWSFVSP*SSSPSR Trigger: TCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGA...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR TCA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGGGAGGGAAAATGTTCTaGAAGTTTTTGGATCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWGGKMF*KFLDPG Trigger: ACCGGGATCCAAAAACTTTCAGAACATTTTCCCTCC...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR GCA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTAGCTGCTTCCTCTGTTaGCAGTTCCAAAAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSEQSIGDDTNNGICPPSSCFLC*QFQKCL Trigger: CAGGCATTTTTGGAACTGGCAACAGAGGAAGCAGCT...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR GCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACTGTCTCCTTGGCAAATaGTGCAGCAATGGCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNCLLGK*CSNGWV Trigger: GACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACA...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR GCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACCCAACAGGACTGTATTaGCACCAGCTGAGACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNPTGLY*HQLRLQ Trigger: CTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGG...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | GCCACAAACAAGACATTACTTAGTGCTGACATTTATATGACACGTCCCACAAGACTAAGTACTGGACTCTaGGCTGGAGTCACCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: ATNKTLLSADIYMTRPTRLSTGL*AGVTAL Trigger: GAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAG...TCTTGTGGGACGTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | GCTACCCACTGTCTTTGCAAGGTCACAGTTTACAACCAAACTGAACAAACATCTACTAGCTTGGCTTGTTaGGCGTTTACCGGATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: ATHCLCKVTVYNQTEQTSTSLAC*AFTGSP Trigger: TGGTGATCCGGTAAACGCTCAACAAGCCAAGCTAGT...AGATGTTTGTTCAGTTTGGTTGTAAACTGTGACCTTGCAAAGACAGTGGGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS-3UTR GCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATGGCAGCGGCAGCAGCTaGTGCAGCAGCATTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VIIMKINQSLNSFLHCCHGSGSS*CSSIWN Trigger: ATTCCAAATGCTGCTGCAGCAGCTGCTGCCGCTGCC...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR GCA 90 bp | GCCACAAACAAGACATTACTTAGTGCTGACATTTATATGACACGTCCCACAAGACCAACAGGACTGTATTaGCACCAGCTGAGACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ATNKTLLSADIYMTRPTRPTGLY*HQLRLQ Trigger: CTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGG...TCTTGTGGGACGTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR GCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCAGCTTCCTCCACTGTTaGCATCTGAAGAAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSSFLHC*HLKKSH Trigger: ATGGCTCTTCTTCAGATGGCAACAGTGGAGGAAGCT...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR GCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAAGCTTCCTCCACTGTTaGCATCTGAAGAAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTSFLHC*HLKKSH Trigger: ATGGCTCTTCTTCAGATGGCAACAGTGGAGGAAGCT...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | GCCACAAACAAGACATTACTTAGTGCTGACATTTATATGACACGTCCCACAAGACTGGCCGTCTCCAGATaGCAGATCAGGTCGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: ATNKTLLSADIYMTRPTRLAVSR*QIRSSI Trigger: TATACTCGACCTGATCTGCCATCTGGAGACGGCCAG...TCTTGTGGGACGTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACGTAGGGATGTCTCCTTaGCAAATGCTGCAGCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNVGMSP*QMLQQW Trigger: CCATTGCTGCAGCATTTGCCAAGGAGACATCCCTAC...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACATGCTGCAGCAGCATTTaGAATAGCCAAAGGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTCCSSI*NSQRTE Trigger: CTCAGTCCTTTGGCTATTCCAAATGCTGCTGCAGCA...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTAGGGTAAACAGACTTTaGGGCGTAACCATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSEQSIGDDTNNGICPPSRVNRL*GVTISS Trigger: TGAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCT...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCTCTTTTGTTAGCCCTTaGTCATCAAGTCCCTCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSSFVSP*SSSPSR Trigger: TCGAGAGGGACTTGATGATCAAGGGCTAACAAAAGA...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR TCA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTAGATCAATCAAAGCCTaGATAGCTTCCTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FSEQSIGDDTNNGICPPSRSIKA*IASSTV Trigger: AACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCT...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR GCA 90 bp | TGCATGCACAAGGCTACCCACTGTCTTTGCAAGGTCACAGTTTACAACCAAACTAACCATAGTAATAGCTaGTTCCTCTGTTGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CMHKATHCLCKVTVYNQTNHSNS*FLCCQF Trigger: GAACTGGCAACAGAGGAAGCAGCTATTACTATGGTT...AGTTTGGTTGTAAACTGTGACCTTGCAAAGACAGTGGGTAGCCTTGTGCATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
||
| CDS-3UTR CCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATCTAAGTACTGGACTCTaGGCTGGAGTCACCGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: VIIMKINQSLNSFLHCCHLSTGL*AGVTAL Trigger: GAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAG...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
||
| CDS-3UTR TCA 90 bp | GCAAGGTCACAGTTTACAACCAAACTGAACAAACATCTAAGACAAGCCTATGTTGGTAACTTTCGAATGTaGAGTACACGAGAGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARSQFTTKLNKHLRQAYVGNFRM*STREGA Trigger: GGCTCCCTCTCGTGTACTTCACATTCGAAAGTTACC...AACATAGGCTTGTCTTAGATGTTTGTTCAGTTTGGTTGTAAACTGTGACCTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
||
| CDS-3UTR TCA 90 bp | AAAGGGGTAACCTTGCTTCTCTACGGTTTCGTACCTTACATATCTAAAAATGATACCGCTGTCACAGCTTaGAGAACTACTTGCGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KGVTLLLYGFVPYISKNDTAVTA*RTTCAR Trigger: ACGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGT...ATCATTTTTAGATATGTAAGGTACGAAACCGTAGAGAAGCAAGGTTACCCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
||
| CDS-3UTR TCA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCGCTAGCTTGGCTTGTTaGGCGTTTACCGGATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KVIIMKINQSLNSFLHCCASLAC*AFTGSP Trigger: TGGTGATCCGGTAAACGCTCAACAAGCCAAGCTAGC...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
||
| CDS-3UTR TCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACGGAGGGAAAATGTTCTaGAAGTTTTTGGATCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNGGKMF*KFLDPG Trigger: ACCGGGATCCAAAAACTTTCAGAACATTTTCCCTCC...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR TCA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCAGATCAATCAAAGCCTaGATAGCTTCCTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CDSITPFPPWQSKHELRSRSIKA*IASSTV Trigger: AACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCT...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR GCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATCCAACAGGACTGTATTaGCACCAGCTGAGACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VIIMKINQSLNSFLHCCHPTGLY*HQLRLQ Trigger: CTGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGG...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
||
| CDS-3UTR CCA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTGTACTGGATGTAAATTaGTTGGTTACGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSEQSIGDDTNNGICPPSVLDVN*LVTKMR Trigger: CCTCATCTTCGTAACCAACCAATTTACATCCAGTAC...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAAATTATTCTAAGTACTaGACTCTGGGCTGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTNYSKY*TLGWSH Trigger: GTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATT...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATCTGGCCGTCTCCAGATaGCAGATCAGGTCGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: VIIMKINQSLNSFLHCCHLAVSR*QIRSSI Trigger: TATACTCGACCTGATCTGCCATCTGGAGACGGCCAG...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
||
| CDS-3UTR CCA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACAGGGTAAACAGACTTTaGGGCGTAACCATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNRVNRL*GVTISS Trigger: TGAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCT...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTACTGGATGTAAATTaGTTGGTTACGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTVLDVN*LVTKMR Trigger: CCTCATCTTCGTAACCAACCAATTTACATCCAGTAC...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR GCA 90 bp | ACTGTCTTTGCAAGGTCACAGTTTACAACCAAACTGAACAAACATCTAAGACAAAGCTGCTTCCTCTGTTaGCAGTTCCAAAAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TVFARSQFTTKLNKHLRQSCFLC*QFQKCL Trigger: CAGGCATTTTTGGAACTGGCAACAGAGGAAGCAGCT...TTGTCTTAGATGTTTGTTCAGTTTGGTTGTAAACTGTGACCTTGCAAAGACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS-3UTR GCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATAGCTGCTTCCTCTGTTaGCAGTTCCAAAAATGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VIIMKINQSLNSFLHCCHSCFLC*QFQKCL Trigger: CAGGCATTTTTGGAACTGGCAACAGAGGAAGCAGCT...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR GCA 90 bp | GCCACAAACAAGACATTACTTAGTGCTGACATTTATATGACACGTCCCACAAGAAACCATAGTAATAGCTaGTTCCTCTGTTGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATNKTLLSADIYMTRPTRNHSNS*FLCCQF Trigger: GAACTGGCAACAGAGGAAGCAGCTATTACTATGGTT...TCTTGTGGGACGTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAACTACTTGCGCACGTTaGTTTAATGTATTATCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DSITPFPPWQSKHELRSTTTCAR*FNVLSV Trigger: GACAGATAATACATTAAACCAACGTGCGCAAGTAGT...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CCA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCTGCTGCAGCAGCATTTaGAATAGCCAAAGGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVIIMKINQSLNSFLHCCCCSSI*NSQRTE Trigger: CTCAGTCCTTTGGCTATTCCAAATGCTGCTGCAGCA...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR CCA 90 bp | ACTGTCTTTGCAAGGTCACAGTTTACAACCAAACTGAACAAACATCTAAGACAAAATTATTCTAAGTACTaGACTCTGGGCTGGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TVFARSQFTTKLNKHLRQNYSKY*TLGWSH Trigger: GTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATT...TTGTCTTAGATGTTTGTTCAGTTTGGTTGTAAACTGTGACCTTGCAAAGACAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS-3UTR TCA 90 bp | ATATGTACTAAAAATTCAGCTTTCCACGCCATCATGCTGCAATTAGCATATACTTGTTCCATCCTTTTATaGCCTGTAACTACCATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICTKNSAFHAIMLQLAYTCSILL*PVTTMP Trigger: TGGCATGGTAGTTACAGGTCATAAAAGGATGGAACA...AGTATATGCTAATTGCAGCATGATGGCGTGGAAAGCTGAATTTTTAGTACATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198403.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCTTTGCAAGGTCACAGTTTACAACCAAACTGAACAAACATCTAAGACAAGTACTGGATGTAAATTaGTTGGTTACGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVFARSQFTTKLNKHLRQVLDVN*LVTKMR Trigger: CCTCATCTTCGTAACCAACCAATTTACATCCAGTAC...TTGTCTTAGATGTTTGTTCAGTTTGGTTGTAAACTGTGACCTTGCAAAGACAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS-3UTR CCA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATGTACTGGATGTAAATTaGTTGGTTACGAAGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VIIMKINQSLNSFLHCCHVLDVN*LVTKMR Trigger: CCTCATCTTCGTAACCAACCAATTTACATCCAGTAC...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| 3UTR CAA 72 bp | ATAAATTTTCAACAGCATCATGACAAAGGGGTAACCTaGCTTCTCTACGGTTTCGTACCTTACATATCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: INFQQHHDKGVT*LLYGFVPYISK Trigger: TTTAGATATGTAAGGTACGAAACCGTAGAGAAGCAAGGTTACCCCTTTGTCATGATGCTGTTGAAAATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS CCA 90 bp | CAGGAAGCCCTAGTAGGGATGTCTCCTTGGCAAATGCTGCAGCAATaGCTGGGTCTAACGCAGGCTGGCCGTCTCCAGATGGCAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: QEALVGMSPWQMLQQ*LGLTQAGRLQMADQ Trigger: CTGATCTGCCATCTGGAGACGGCCAGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACATCCCTACTAGGGCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195902.2 |
||
| CDS CCA 90 bp | CTGGAACAGCTAGTAGGGATGTCTCCTTGGCAAATGCTGCAGCAATaGCTGGGTCTAACGCAGGCTGGCCGTCTCCAGATGGCAGATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LEQLVGMSPWQMLQQ*LGLTQAGRLQMADQ Trigger: CTGATCTGCCATCTGGAGACGGCCAGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACATCCCTACTAGCTGTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029780.12 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS GCA 90 bp | AGTCACCGCACTCTCACTGACTGTGGTGCCACTAAGAGGTGTATTTaGTGTCTGGACCGCTGTCACAGCTTGAAGAACTACTTGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: SHRTLTDCGATKRCI*CLDRCHSLKNYLRT Trigger: CGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGTCCAGACAGCAAATACACCTCTTAGTGGCACCACAGTCAGTGAGAGTGCGGTGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGACAGTGCCCCCGGTGTaGGCAAACAGAGTTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWTVPPV*ANRVRR Trigger: TCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGT...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTGACCGCTGTCACAGCTaGAAGAACTACTTGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: FSEQSIGDDTNNGICPPSDRCHS*KNYLRT Trigger: CGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGTC...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
||
| CDS-3UTR CAA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGACCAACAGGACTGTATaGCCACCAGCTGAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWTNRTV*PPAETP Trigger: TGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGT...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | GATTCATGGCGAGCTGGGACTGGTTCCCATCAGCCATCTGTATCAGAGCACTGTCTGGATGTAAATTGGTaGGTTACGAAGATGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSWRAGTGSHQPSVSEHCLDVNW*VTKMRC Trigger: ACACCTCATCTTCGTAACCAACCAATTTACATCCAG...ACAGTGCTCTGATACAGATGGCTGATGGGAACCAGTCCCAGCTCGCCATGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR CAA 90 bp | AAATCAAACTCTGGTCCCCACTTTTCTGAACAGTCAATAGGTGATGACACCAACACAGTGCCCCCGGTGTaGGCAAACAGAGTTCGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KSNSGPHFSEQSIGDDTNTVPPV*ANRVRR Trigger: TCTGCGAACTCTGTTTGCCAACACCGGGGGCACTGT...GTTGGTGTCATCACCTATTGACTGTTCAGAAAAGTGGGGACCAGAGTTTGATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | AACTGTGTGCATGCACAAGGCTACCCACTGTCTTTGCAAGGTCACAGTTTACAACCACTCATATTAGAGTaGGGGCTGCTGAGAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: NCVHAQGYPLSLQGHSLQPLILE*GLLRTL Trigger: CAGTGTTCTCAGCAGCCCCAACTCTAATATGAGTGG...TTGTAAACTGTGACCTTGCAAAGACAGTGGGTAGCCTTGTGCATGCACACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS-3UTR CAA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTGAGGGTAAACAGACTTaGGGGCGTAACCATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FSEQSIGDDTNNGICPPSEGKQT*GRNHLF Trigger: GAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTC...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACACCACTCATATTAGAGTaGGGGCTGCTGAGAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: DSITPFPPWQSKHELRSTPLILE*GLLRTL Trigger: CAGTGTTCTCAGCAGCCCCAACTCTAATATGAGTGG...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | GCCACAAACAAGACATTACTTAGTGCTGACATTTATATGACACGTCCCACAAGAGACCGCTGTCACAGCTaGAAGAACTACTTGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: ATNKTLLSADIYMTRPTRDRCHS*KNYLRT Trigger: CGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGTC...TCTTGTGGGACGTGTCATATAAATGTCAGCACTAAGTAATGTCTTGTTTGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | TGTGATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCGAGGGTAAACAGACTTaGGGGCGTAACCATCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CDSITPFPPWQSKHELRSEGKQT*GRNHLF Trigger: GAAGAGATGGTTACGCCCCAAAGTCTGTTTACCCTC...GCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS CCA 90 bp | GTAGTACATATTGTCAATAATTATTCTAAGTACTGGACTCTGGGCTaGAGTCACCGCACTCTCACTGACTGTGGTGCCACTAAGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VVHIVNNYSKYWTLG*SHRTLTDCGATKRC Trigger: ACACCTCTTAGTGGCACCACAGTCAGTGAGAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAATATGTACTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS CCA 90 bp | AAGTGTTACAGGGTAGTACATATTGTCAATAATTATTCTAAGTACTaGACTCTGGGCTGGAGTCACCGCACTCTCACTGACTGTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: KCYRVVHIVNNYSKY*TLGWSHRTLTDCGA Trigger: GGCACCACAGTCAGTGAGAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAATATGTACTACCCTGTAACACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | TTTTCTGAACAGTCAATAGGTGATGACACCAACAATGGGATCTGCCCGCCATCTTTACTATCGTTACCGTaGGCTGTAACTACCATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSEQSIGDDTNNGICPPSLLSLP*AVTTMP Trigger: TGGCATGGTAGTTACAGCCAACGGTAACGATAGTAA...AGATGGCGGGCAGATCCCATTGTTGGTGTCATCACCTATTGACTGTTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | GCAAGGTCACAGTTTACAACCAAACTGAACAAACATCTAAGACAAGCCTATGTTGACCGCTGTCACAGCTaGAAGAACTACTTGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: ARSQFTTKLNKHLRQAYVDRCHS*KNYLRT Trigger: CGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGTC...AACATAGGCTTGTCTTAGATGTTTGTTCAGTTTGGTTGTAAACTGTGACCTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
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| CDS-3UTR CAA 90 bp | GTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACAGTGGAGTACTGGATGTAAATaGGTTGGTTACGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLLLSHPGRVNMNSEAQWSTGCK*VGYEDE Trigger: CTCATCTTCGTAACCAACCAATTTACATCCAGTACT...CCACTGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCGACCGCTGTCACAGCTaGAAGAACTACTTGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: KVIIMKINQSLNSFLHCCDRCHS*KNYLRT Trigger: CGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGTC...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR CAA 90 bp | GATAGTATTACTCCTTTCCCACCCTGGCAGAGTAAACATGAACTCAGAAGCACACTGGATGTAAATTGGTaGGTTACGAAGATGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DSITPFPPWQSKHELRSTLDVNW*VTKMRC Trigger: ACACCTCATCTTCGTAACCAACCAATTTACATCCAG...TGTGCTTCTGAGTTCATGTTTACTCTGCCAGGGTGGGAAAGGAGTAATACTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029780.12 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATACCAACAGGACTGTATaGCCACCAGCTGAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: VIIMKINQSLNSFLHCCHTNRTV*PPAETP Trigger: TGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGT...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| CDS-3UTR CAA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCACCAACAGGACTGTATaGCCACCAGCTGAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KVIIMKINQSLNSFLHCCTNRTV*PPAETP Trigger: TGGAGTCTCAGCTGGTGGCAATACAGTCCTGTTGGT...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197387.5 ENSMUST00000197833.5 |
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| CDS TCA 90 bp | GCAATAACTTCTGTTTCAGTCACTTCACCAGGTAACTTTCGAATGTaGAGTACACGAGAGGGAGCCCCATCCATTTTATCTTCTCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: AITSVSVTSPGNFRM*STREGAPSILSSPL Trigger: TAAAGGAGAAGATAAAATGGATGGGGCTCCCTCTCGTGTACTTCACATTCGAAAGTTACCTGGTGAAGTGACTGAAACAGAAGTTATTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | GTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCCATCCACTCATATTAGAGTaGGGGCTGCTGAGAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: VIIMKINQSLNSFLHCCHPLILE*GLLRTL Trigger: CAGTGTTCTCAGCAGCCCCAACTCTAATATGAGTGG...ATGGCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
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| CDS-3UTR CAA 90 bp | ATATGTACTAAAAATTCAGCTTTCCACGCCATCATGCTGCAATTAGCATATACTCCACTCATATTAGAGTaGGGGCTGCTGAGAACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ICTKNSAFHAIMLQLAYTPLILE*GLLRTL Trigger: CAGTGTTCTCAGCAGCCCCAACTCTAATATGAGTGG...AGTATATGCTAATTGCAGCATGATGGCGTGGAAAGCTGAATTTTTAGTACATAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000198403.2 |
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| CDS CCA 90 bp | GCGCACGTTGGTTTAATGTATTATCTGTCTTTAGTTCTTTGTGATTaGAGTACTGGATGTAAATTGGTTGGTTACGAAGATGAGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AHVGLMYYLSLVLCD*STGCKLVGYEDEVS Trigger: TGACACCTCATCTTCGTAACCAACCAATTTACATCCAGTACTCCAATCACAAAGAACTAAAGACAGATAATACATTAAACCAACGTGCGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS-3UTR CAA 90 bp | AGACACAATGTAACTAGAGCTGACCAGAATACTGAAGTATGTAAACCAAAATACCTGGATGTAAATTGGTaGGTTACGAAGATGAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RHNVTRADQNTEVCKPKYLDVNW*VTKMRC Trigger: ACACCTCATCTTCGTAACCAACCAATTTACATCCAG...GTATTTTGGTTTACATACTTCAGTATTCTGGTCAGCTCTAGTTACATTGTGTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
||
| CDS-3UTR CAA 90 bp | AAGGTTATAATTATGAAGATCAATCAAAGCCTGAATAGCTTCCTCCACTGTTGCAGTACTGGATGTAAATaGGTTGGTTACGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: KVIIMKINQSLNSFLHCCSTGCK*VGYEDE Trigger: CTCATCTTCGTAACCAACCAATTTACATCCAGTACT...GCAACAGTGGAGGAAGCTATTCAGGCTTTGATTGATCTTCATAATTATAACCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197833.5 |
||
| CDS-3UTR CAA 90 bp | AGACACAATGTAACTAGAGCTGACCAGAATACTGAAGTATGTAAACCAAAATACAGTACTGGATGTAAATaGGTTGGTTACGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: RHNVTRADQNTEVCKPKYSTGCK*VGYEDE Trigger: CTCATCTTCGTAACCAACCAATTTACATCCAGTACT...GTATTTTGGTTTACATACTTCAGTATTCTGGTCAGCTCTAGTTACATTGTGTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197464.5 |
||
| CDS CCA 72 bp | CTAGTAGGGATGTCTCCTTGGCAAATGCTGCAGCAATaGCTGGGTCTAACGCAGGCTGGCCGTCTCCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LVGMSPWQMLQQ*LGLTQAGRLQM Trigger: CATCTGGAGACGGCCAGCCTGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACATCCCTACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000195902.2 ENSMUST00000197833.5 ENSMUST00000200097.5 |
||
| CDS CCA 72 bp | CAGCTGCAACAGGAAGCCCTAGTAGGGATGTCTCCTTaGCAAATGCTGCAGCAATGGCTGGGTCTAACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLQQEALVGMSP*QMLQQWLGLTQ Trigger: CTGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACATCCCTACTAGGGCTTCCTGTTGCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195902.2 |
||
| CDS CAA 72 bp | CTGAGAGCCCCTGGAACAGCTAGTAGGGATGTCTCCTaGGCAAATGCTGCAGCAATGGCTGGGTCTAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: LRAPGTASRDVS*ANAAAMAGSNA Trigger: TGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACATCCCTACTAGCTGTTCCAGGGGCTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029780.12 ENSMUST00000197833.5 ENSMUST00000200097.5 |
||
| CDS CAA 72 bp | ACAGCTGCAACAGGAAGCCCTAGTAGGGATGTCTCCTaGGCAAATGCTGCAGCAATGGCTGGGTCTAACGCA | + |
|
Preference number: 6 (lower is better) Translates to: TAATGSPSRDVS*ANAAAMAGSNA Trigger: TGCGTTAGACCCAGCCATTGCTGCAGCATTTGCCAAGGAGACATCCCTACTAGGGCTTCCTGTTGCAGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195902.2 |
||
| CDS CAA 72 bp | CCGTTGGCTGTAACTACCATGCCACTCATATTAGAGTaGGGGCTGCTGAGAACACTGCCTGAGAGTAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PLAVTTMPLILE*GLLRTLPESSS Trigger: CGAGCTACTCTCAGGCAGTGTTCTCAGCAGCCCCAACTCTAATATGAGTGGCATGGTAGTTACAGCCAACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS CAA 90 bp | CTATCGTTACCGTTGGCTGTAACTACCATGCCACTCATATTAGAGTaGGGGCTGCTGAGAACACTGCCTGAGAGTAGCTCGTCAGATCCT | + |
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Preference number: 6 (lower is better) Translates to: LSLPLAVTTMPLILE*GLLRTLPESSSSDP Trigger: AGGATCTGACGAGCTACTCTCAGGCAGTGTTCTCAGCAGCCCCAACTCTAATATGAGTGGCATGGTAGTTACAGCCAACGGTAACGATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS GCA 72 bp | ACTCTCACTGACTGTGGTGCCACTAAGAGGTGTATTTaGTGTCTGGACCGCTGTCACAGCTTGAAGAACTAC | + |
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Preference number: 6 (lower is better) Translates to: TLTDCGATKRCI*CLDRCHSLKNY Trigger: GTAGTTCTTCAAGCTGTGACAGCGGTCCAGACAGCAAATACACCTCTTAGTGGCACCACAGTCAGTGAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS CCA 72 bp | ATTGTCAATAATTATTCTAAGTACTGGACTCTGGGCTaGAGTCACCGCACTCTCACTGACTGTGGTGCCACT | + |
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Preference number: 6 (lower is better) Translates to: IVNNYSKYWTLG*SHRTLTDCGAT Trigger: AGTGGCACCACAGTCAGTGAGAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS TCA 72 bp | TCTGTTTCAGTCACTTCACCAGGTAACTTTCGAATGTaGAGTACACGAGAGGGAGCCCCATCCATTTTATCT | + |
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Preference number: 6 (lower is better) Translates to: SVSVTSPGNFRM*STREGAPSILS Trigger: AGATAAAATGGATGGGGCTCCCTCTCGTGTACTTCACATTCGAAAGTTACCTGGTGAAGTGACTGAAACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS TCA 72 bp | AGAGGTGTATTTGCTGTCTGGACCGCTGTCACAGCTTaGAGAACTACTTGCGCACGTTGGTTTAATGTATTA | + |
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Preference number: 6 (lower is better) Translates to: RGVFAVWTAVTA*RTTCARWFNVL Trigger: TAATACATTAAACCAACGTGCGCAAGTAGTTCTTCAAGCTGTGACAGCGGTCCAGACAGCAAATACACCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS CCA 72 bp | TACATATTGTCAATAATTATTCTAAGTACTGGACTCTaGGCTGGAGTCACCGCACTCTCACTGACTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: YILSIIILSTGL*AGVTALSLTVV Trigger: CACCACAGTCAGTGAGAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAATATGTA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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| CDS CCA 72 bp | AGGGTAGTACATATTGTCAATAATTATTCTAAGTACTaGACTCTGGGCTGGAGTCACCGCACTCTCACTGAC | + |
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Preference number: 6 (lower is better) Translates to: RVVHIVNNYSKY*TLGWSHRTLTD Trigger: GTCAGTGAGAGTGCGGTGACTCCAGCCCAGAGTCCAGTACTTAGAATAATTATTGACAATATGTACTACCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029780.12 ENSMUST00000197464.5 ENSMUST00000197833.5 ENSMUST00000200097.5 |
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