Pregenerated sensors for PTAR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074925Ensembl transcript IDs: ENSMUST00000067077.2, ENSMUST00000099560.5, ENSMUST00000235740.2, ENSMUST00000236951.2, ENSMUST00000237333.2
Found 253 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTAACTCAAGTACAAGCGTCCACCAGAGCAAGGAAGGAGGGGTTTaGCTTTCCTTCTGTCCCTCCACCTGCAATGCACATAACCAAGCT | + |
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Preference number: 1 (lower is better) Translates to: PNSSTSVHQSKEGGV*LSFCPSTCNAHNQA Trigger: AGCTTGGTTATGTGCATTGCAGGTGGAGGGACAGAAGGAAAGGCAAACCCCTCCTTCCTTGCTCTGGTGGACGCTTGTACTTGAGTTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTaGCTGCTTCTCTTCAAGCATAGGCTACACAGCTTTTGTGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: LSLSLSLSLSRQCIV*LLLFKHRLHSFCVF Trigger: GAAGACACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | TTGGCATACCTGACTTGCTCTACGTTCCGACAAGTGGACAATACTTaGTCAATAAACCTGTGCTCCATCTCCAGGCCTAGGGAGTCTGGA | + |
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Preference number: 1 (lower is better) Translates to: LAYLTCSTFRQVDNT*SINLCSISRPRESG Trigger: TCCAGACTCCCTAGGCCTGGAGATGGAGCACAGGTTTATTGATCAAGTATTGTCCACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
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| 3UTR GCA 90 bp | AATCCACCCCTTTCACTGACTCAGAGTCACCAGCCATTTCCTGTATaGATTGGCATACCTGACTTGCTCTACGTTCCGACAAGTGGACAA | + |
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Preference number: 1 (lower is better) Translates to: NPPLSLTQSHQPFPV*IGIPDLLYVPTSGQ Trigger: TTGTCCACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAATGCATACAGGAAATGGCTGGTGACTCTGAGTCAGTGAAAGGGGTGGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
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| 3UTR TCA 90 bp | AACTTCGATACAGACTGCCATACCAGGCAAAGTGGTATCTGTCAGTaGGGACAGCTATTCCCAGGAGAACAAGCCAGTCACACTAATGTC | + |
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Preference number: 1 (lower is better) Translates to: NFDTDCHTRQSGICQ*GQLFPGEQASHTNV Trigger: GACATTAGTGTGACTGGCTTGTTCTCCTGGGAATAGCTGTCCTCACTGACAGATACCACTTTGCCTGGTATGGCAGTCTGTATCGAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR GCA 90 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTaGTTCTCTTCAAGCATAGGCTACACAGCTTTTGTGTCTTCAATT | + |
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Preference number: 1 (lower is better) Translates to: LSLSLSLSLGSALCA*FSSSIGYTAFVSSI Trigger: AATTGAAGACACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
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| 3UTR GCA 90 bp | CCACCATGCTTCTCTAATAAGCATGAGCTCATTACAGACTATGTGTaGTGGGGGTGGGGGAGCAAAGACATTGCTTGTGTTTGCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: PPCFSNKHELITDYV*WGWGSKDIACVCSF Trigger: GAAACTGCAAACACAAGCAATGTCTTTGCTCCCCCACCCCCAGCACACATAGTCTGTAATGAGCTCATGCTTATTAGAGAAGCATGGTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | CAGTCAGCGCCAAGTGCTTCTGCGGGTGGATTAATATTCTTAAGCTaGACTGACTTGCTCTACGTTCCGACAAGTGGACAATACTTGATC | + |
|
Preference number: 1 (lower is better) Translates to: QSAPSASAGGLIFLS*TDLLYVPTSGQYLI Trigger: GATCAAGTATTGTCCACTTGTCGGAACGTAGAGCAAGTCAGTTCAGCTTAAGAATATTAATCCACCCGCAGAAGCACTTGGCGCTGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235740.2 |
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| 3UTR CCA 90 bp | GAGAGCACAGCCCTTGTTGCTGAGATAGAGCTACAGCGTGCACTTTaGTACTTATCCCTGATGAATTCAGTATCAAAGAGCAGGGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: ESTALVAEIELQRAL*YLSLMNSVSKSRVS Trigger: TGAAACCCTGCTCTTTGATACTGAATTCATCAGGGATAAGTACCAAAGTGCACGCTGTAGCTCTATCTCAGCAACAAGGGCTGTGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | TTACTTCCCTGGCTACTTTTCTGGGTCCATCTAGAGGCTTCTTCATaGAGTGTAAGTAGCTGCCATTTCTTGCTTACAGCACAGACACTG | + |
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Preference number: 1 (lower is better) Translates to: LLPWLLFWVHLEASS*SVSSCHFLLTAQTL Trigger: CAGTGTCTGTGCTGTAAGCAAGAAATGGCAGCTACTTACACTTCATGAAGAAGCCTCTAGATGGACCCAGAAAAGTAGCCAGGGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | ACACACACACACAGAGAGTGTGAACTGGGAGGAGCTGAACATTACTaGACTAACATTGTCTACCACATATGCATTCTACAGACCACTGCA | + |
|
Preference number: 1 (lower is better) Translates to: THTHRECELGGAEHY*TNIVYHICILQTTA Trigger: TGCAGTGGTCTGTAGAATGCATATGTGGTAGACAATGTTAGTTCAGTAATGTTCAGCTCCTCCCAGTTCACACTCTCTGTGTGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | CAAGTCCGGATATGCACTAAGCATGCAACTCAAGCTGGTATGCTTTaGAGAAACAGGACAGACTTTAGTGAAGACCGAAGACTGTCACTA | + |
|
Preference number: 1 (lower is better) Translates to: QVRICTKHATQAGML*RNRTDFSEDRRLSL Trigger: TAGTGACAGTCTTCGGTCTTCACTAAAGTCTGTCCTGTTTCTTCAAAGCATACCAGCTTGAGTTGCATGCTTAGTGCATATCCGGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR GCA 90 bp | GCTTCTATAAAACTGAGTTTGCTGAAACTTCCCGGTACCCCACCATaGTTCTCTAATAAGCATGAGCTCATTACAGACTATGTGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: ASIKLSLLKLPGTPP*FSNKHELITDYVCW Trigger: CCAGCACACATAGTCTGTAATGAGCTCATGCTTATTAGAGAAGCATGGTGGGGTACCGGGAAGTTTCAGCAAACTCAGTTTTATAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR GCA 90 bp | GCAAACAAGTCCGGATATGCACTAAGCATGCAACTCAAGCTGGTATaGTTTGAAGAAACAGGACAGACTTTAGTGAAGACCGAAGACTGT | + |
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Preference number: 1 (lower is better) Translates to: ANKSGYALSMQLKLV*FEETGQTLVKTEDC Trigger: ACAGTCTTCGGTCTTCACTAAAGTCTGTCCTGTTTCTTCAAAGCATACCAGCTTGAGTTGCATGCTTAGTGCATATCCGGACTTGTTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | TACAGCAATAGGAACCCTAACCAAGACAGCCATGAAAAGGGAATTTaGGAGGGACACCTTTTACTCATACTCCCTGTGTTTATAGATAGG | + |
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Preference number: 1 (lower is better) Translates to: YSNRNPNQDSHEKGI*EGHLLLILPVFIDR Trigger: CCTATCTATAAACACAGGGAGTATGAGTAAAAGGTGTCCCTCTCAAATTCCCTTTTCATGGCTGTCTTGGTTAGGGTTCCTATTGCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | CTCTACCACATTAGTTACAACAAACACACACCCTGCTCTTTGGAATaGTGCAAACATAAACTGCACAGCCTGCTTCCTATACAAACATGC | + |
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Preference number: 1 (lower is better) Translates to: LYHISYNKHTPCSLE*CKHKLHSLLPIQTC Trigger: GCATGTTTGTATAGGAAGCAGGCTGTGCAGTTTATGTTTGCATCATTCCAAAGAGCAGGGTGTGTGTTTGTTGTAACTAATGTGGTAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR GCA 90 bp | TGTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCAAGTGCTTCTaGGGGTGGATTAATATTCTTAAGCTGAACTGCAAAATAAATGTT | + |
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Preference number: 1 (lower is better) Translates to: CSHCVLRTAVSAKCF*GWINILKLNCKINV Trigger: AACATTTATTTTGCAGTTCAGCTTAAGAATATTAATCCACCCGCAGAAGCACTTGGCGCTGACTGCAGTTCTGAGAACACAATGGCTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
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| 3UTR CCA 90 bp | AAGGTAATGAAGACAGCAAATCTAAATCTCACTGATTTTTACACATaGGAGCTCTCCTTAAGAACAGCAGAGCTAGCCCACATCACTCAC | + |
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Preference number: 1 (lower is better) Translates to: KVMKTANLNLTDFYT*ELSLRTAELAHITH Trigger: GTGAGTGATGTGGGCTAGCTCTGCTGTTCTTAAGGAGAGCTCCCATGTGTAAAAATCAGTGAGATTTAGATTTGCTGTCTTCATTACCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR GCA 90 bp | CGCTATTTGCATTTTTACTACCTACTTCCAACTTTACTAGGAAGATaGAATCACGGTATATTAGAGGACTCTACGGCTTTGGGAAGGTGT | + |
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Preference number: 1 (lower is better) Translates to: RYLHFYYLLPTLLGR*NHGILEDSTALGRC Trigger: ACACCTTCCCAAAGCCGTAGAGTCCTCTAATATACCGTGATTGCATCTTCCTAGTAAAGTTGGAAGTAGGTAGTAAAAATGCAAATAGCG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | ATGCTCTTGTTCAGAAAGCATGAACTATATACAGCTAACATCCTTTaGAGGACACTGTTTCTTCAGCAGAGCAACCTAACTGCCTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: MLLFRKHELYTANIL*RTLFLQQSNLTAFS Trigger: AGAAAAGGCAGTTAGGTTGCTCTGCTGAAGAAACAGTGTCCTTCAAAGGATGTTAGCTGTATATAGTTCATGCTTTCTGAACAAGAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | AACAAATCTAAGCAAGGTAATGAAGACAGCAAATCTAAATCTCACTaGTTTTTACACATGGGAGCTCTCCTTAAGAACAGCAGAGCTAGC | + |
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Preference number: 1 (lower is better) Translates to: NKSKQGNEDSKSKSH*FLHMGALLKNSRAS Trigger: GCTAGCTCTGCTGTTCTTAAGGAGAGCTCCCATGTGTAAAAATCAGTGAGATTTAGATTTGCTGTCTTCATTACCTTGCTTAGATTTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | GGATTTGTTAATTTCTCACAATATGCACAGCACTATGTGATATACTaGACCTGTCTGTCTTGCATCTTACACTTGCAGAGAAAAAGCAGC | + |
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Preference number: 1 (lower is better) Translates to: GFVNFSQYAQHYVIY*TCLSCILHLQRKSS Trigger: GCTGCTTTTTCTCTGCAAGTGTAAGATGCAAGACAGACAGGTTCAGTATATCACATAGTGCTGTGCATATTGTGAGAAATTAACAAATCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | CAAAGCCTTCTCCACAAACAACCTTCTGAAGTACTAAAATCTGAGTaGAATAAATGTTTACTTCCCTGGCTACTTTTCTGGGTCCATCTA | + |
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Preference number: 1 (lower is better) Translates to: QSLLHKQPSEVLKSE*NKCLLPWLLFWVHL Trigger: TAGATGGACCCAGAAAAGTAGCCAGGGAAGTAAACATTTATTTCACTCAGATTTTAGTACTTCAGAAGGTTGTTTGTGGAGAAGGCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR TCA 90 bp | TCACTTAATAATCAGAGAATTGCTATCCAAGTACATGTGTGTATGTaGAGATGTTTTCACTGCACAGGCAAAATAAACAAAGAACCCAAC | + |
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Preference number: 1 (lower is better) Translates to: SLNNQRIAIQVHVCM*RCFHCTGKINKEPN Trigger: GTTGGGTTCTTTGTTTATTTTGCCTGTGCAGTGAAAACATCTTCACATACACACATGTACTTGGATAGCAATTCTCTGATTATTAAGTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCCACACGTGGAGCCTGAGGGCATGAAACATGGCTGCAGTGGAGGGGCAGTGACAGGGATGGCCTaGGAGGGTCGAGATGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: PWPHVEPEGMKHGCSGGAVTGMA*EGRDVG Trigger: CCCTACATCTCGACCCTCTCAGGCCATCCCTGTCAC...TGCCCCTCCACTGCAGCCATGTTTCATGCCCTCAGGCTCCACGTGTGGCCAGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGCCACACGTGGAGCCTGAGGGCATGAAACATGGCTGCAGTGGAGGGGCACGTGAGAGCCTCAATTaGCACAATGCTCCAGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: PWPHVEPEGMKHGCSGGARESLN*HNAPED Trigger: ATCTTCTGGAGCATTGTGTCAATTGAGGCTCTCACG...TGCCCCTCCACTGCAGCCATGTTTCATGCCCTCAGGCTCCACGTGTGGCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR CAA 90 bp | TGGAGCTGGGGTCCGCTTCAGGCGCTTGGTTTCCTGGGAATAGCCTaGCTTGCTAGAGTCACTCAGTCCGTCCACTTCCATTGCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: WSWGPLQALGFLGIA*LARVTQSVHFHCLR Trigger: TCTCAGGCAATGGAAGTGGACGGACTGAGTGACTCTAGCAAGCAAGGCTATTCCCAGGAAACCAAGCGCCTGAAGCGGACCCCAGCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGTGAGCTCTCAGCTGCTGAGCCACCTCTCCAGCCCCTTCCTTCTTTGCGAGGGGCAGCGTGAGTaGAAACCACACATTGAATTG | + |
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Preference number: 2 (lower is better) Translates to: SSVSSQLLSHLSSPFLLCEGQRE*KPHIEL Trigger: CAATTCAATGTGTGGTTTGCACTCACGCTGCCCCTC...GCAAAGAAGGAAGGGGCTGGAGAGGTGGCTCAGCAGCTGAGAGCTCACTGAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR GCA 90 bp | AGTTCAGTGAGCTCTCAGCTGCTGAGCCACCTCTCCAGCCCCTTCCTTCTTTGCGCCGCCTGCCTTAAATaGATGACATTGAATGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SSVSSQLLSHLSSPFLLCAACLK*MTLNVR Trigger: CCTCACATTCAATGTCATGCATTTAAGGCAGGCGGC...GCAAAGAAGGAAGGGGCTGGAGAGGTGGCTCAGCAGCTGAGAGCTCACTGAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR TCA 90 bp | GTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCAGCAACTGAACAGAGGTaGGCAAAGTATGTAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: VLPSTRVAIVFSELQSAPATEQR*AKYVSQ Trigger: TTGGCTTACATACTTTGCTCACCTCTGTTCAGTTGC...TGGCGCTGACTGCAGTTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGTGAGCTCTCAGCTGCTGAGCCACCTCTCCAGCCCCTTCCTTCTTTGCGCAACTGAACAGAGGTaGGCAAAGTATGTAAGCCAA | + |
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Preference number: 2 (lower is better) Translates to: SSVSSQLLSHLSSPFLLCATEQR*AKYVSQ Trigger: TTGGCTTACATACTTTGCTCACCTCTGTTCAGTTGC...GCAAAGAAGGAAGGGGCTGGAGAGGTGGCTCAGCAGCTGAGAGCTCACTGAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGACGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACTGCAGTCATTGGCATACCTGACTTaGTCTACGTTCCGACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: ADVLPSTRVAIVFSELQSLAYLT*STFRQV Trigger: CACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAA...TGACTGCAGTTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
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| 3UTR CAA 90 bp | TATGTGCACATGAGAGTCTCTGAGCAAAGAGGCTACAAGGGAGTTTaGGATCCCGTGAGGCAGGCGCTACAGATGGAACTGGGAATCAAG | + |
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Preference number: 2 (lower is better) Translates to: YVHMRVSEQRGYKGV*DPVRQALQMELGIK Trigger: CTTGATTCCCAGTTCCATCTGTAGCGCCTGCCTCACGGGATCCAAAACTCCCTTGTAGCCTCTTTGCTCAGAGACTCTCATGTGCACATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATaGTGTGCCTGCTTCTCTTCAAGCATAGGCTACACAGCTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSLSLSLGSA*CACFSSSIGYTAFV Trigger: CACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
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| 3UTR CAA 90 bp | AGGGAGCTCACCAGAGGCCAAAGCCTAATCACACTTGCACTACACTaGGTTCCTCACGGGTCAGGTAGGAATGTCTGTTTCAAAACTGTC | + |
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Preference number: 2 (lower is better) Translates to: RELTRGQSLITLALH*VPHGSGRNVCFKTV Trigger: GACAGTTTTGAAACAGACATTCCTACCTGACCCGTGAGGAACCAAGTGTAGTGCAAGTGTGATTAGGCTTTGGCCTCTGGTGAGCTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGAGCAACCTAACTGCCTTTTCTTTTTAAACCACCAGCCTCTAGTTGTTTCGCGACTTCTCCAGCCTTaGGAGCACAGCCCTTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: AEQPNCLFFLNHQPLVVSRLLQP*EHSPCC Trigger: GCAACAAGGGCTGTGCTCTCAAGGCTGGAGAAGTCG...CGAAACAACTAGAGGCTGGTGGTTTAAAAAGAAAAGGCAGTTAGGTTGCTCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR CAA 90 bp | CAGCCGGCTGGCGTGCCAGCCACGTTACTAGTACTAACCATGCATTaGGAGAAACATGCTGTTAAACAGTATGATTTCCCAGAGACGCAT | + |
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Preference number: 2 (lower is better) Translates to: QPAGVPATLLVLTMH*EKHAVKQYDFPETH Trigger: ATGCGTCTCTGGGAAATCATACTGTTTAACAGCATGTTTCTCCAAATGCATGGTTAGTACTAGTAACGTGGCTGGCACGCCAGCCGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCAGTGAGCTCTCAGCTGCTGAGCCACCTCTCCAGCCCCTTCCTTCTTTGCTACATAGCCCTTATTTaGAACTATAAGTGGCTTCTG | + |
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Preference number: 2 (lower is better) Translates to: SSVSSQLLSHLSSPFLLCYIALI*NYKWLL Trigger: CAGAAGCCACTTATAGTTTCAAATAAGGGCTATGTA...GCAAAGAAGGAAGGGGCTGGAGAGGTGGCTCAGCAGCTGAGAGCTCACTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAGAAAGGCATGTTCTTAGAATAAGGCAAAGGGTCACTTGGGACAACACCTATGTGTGCTGGGGGTaGGGGAGCAAAGACATTGCT | + |
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Preference number: 2 (lower is better) Translates to: LGERHVLRIRQRVTWDNTYVCWG*GSKDIA Trigger: AGCAATGTCTTTGCTCCCCCACCCCCAGCACACATA...GGTGTTGTCCCAAGTGACCCTTTGCCTTATTCTAAGAACATGCCTTTCTCCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR CCA 90 bp | AACATCTGCATCTCTCATCTTATTCTGGTCTCGGTCAGGATGCCACTATCTTCAACAGACTATGTGTGCTaGGGGTGGGGGAGCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: NICISHLILVSVRMPLSSTDYVC*GWGSKD Trigger: GTCTTTGCTCCCCCACCCCCAGCACACATAGTCTGT...TGAAGATAGTGGCATCCTGACCGAGACCAGAATAAGATGAGAGATGCAGATGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGGAGGAACATCTGCTGACCATTGATTTCTCTGAGGCTCTGAAGAGGGAGCCATACCAGGCAAAGTaGTATCTGTCAGTGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SVEEHLLTIDFSEALKREPYQAK*YLSVRT Trigger: TGTCCTCACTGACAGATACCACTTTGCCTGGTATGG...CTCCCTCTTCAGAGCCTCAGAGAAATCAATGGTCAGCAGATGTTCCTCCACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR TCA 90 bp | TACTTTGTAGCCTATAAATCTGCATTGTGTCTGCAGCAGCAGCCCCTGGCCACACATGAAAAGGGAATTTaGGAGGGACACCTTTTACTC | + |
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Preference number: 2 (lower is better) Translates to: YFVAYKSALCLQQQPLATHEKGI*EGHLLL Trigger: GAGTAAAAGGTGTCCCTCTCAAATTCCCTTTTCATG...TGTGGCCAGGGGCTGCTGCTGCAGACACAATGCAGATTTATAGGCTACAAAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTGGAGGAACATCTGCTGACCATTGATTTCTCTGAGGCTCTGAAGAGGGAGCTTGCATCTTACACTTaGAGAGAAAAAGCAGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SVEEHLLTIDFSEALKRELASYT*REKAAL Trigger: CAAGGCTGCTTTTTCTCTGCAAGTGTAAGATGCAAG...CTCCCTCTTCAGAGCCTCAGAGAAATCAATGGTCAGCAGATGTTCCTCCACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGCACAATTATTTGCACACTaGCCTGTAATTATGATGCCT | + |
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Preference number: 2 (lower is better) Translates to: SLSLSLSAVHCVPASLQAQLFAH*PVIMMP Trigger: AGGCATCATAATTACAGGGCAGTGTGCAAATAATTG...TGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAGAAAGGCATGTTCTTAGAATAAGGCAAAGGGTCACTTGGGACAACACCGATCAGATGTGCCTCTaGTGCTATATGCAAGATCTG | + |
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Preference number: 2 (lower is better) Translates to: LGERHVLRIRQRVTWDNTDQMCL*CYMQDL Trigger: CAGATCTTGCATATAGCACCAGAGGCACATCTGATC...GGTGTTGTCCCAAGTGACCCTTTGCCTTATTCTAAGAACATGCCTTTCTCCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| 3UTR-3UTR CCA 90 bp | CATTCCCAGAGGAATAGGAAGCCTTTTGTGACTCCGAGTACTTTGATACTGAACTCAGGGTCAGCTTTGTaGCTCATGCTCTTGTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HSQRNRKPFVTPSTLILNSGSAL*LMLLFR Trigger: TCTGAACAAGAGCATGAGCCACAAAGCTGACCCTGA...GTTCAGTATCAAAGTACTCGGAGTCACAAAAGGCTTCCTATTCCTCTGGGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 90 bp | ACTCAGAGTCACCAGCCATTTCCTGTATGCATTGGCATACCTGACTaGCTCTACGTTCCGACAAGTGGACAATACTTGATCAATAAACCT | + |
|
Preference number: 2 (lower is better) Translates to: TQSHQPFPVCIGIPD*LYVPTSGQYLINKP Trigger: AGGTTTATTGATCAAGTATTGTCCACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAATGCATACAGGAAATGGCTGGTGACTCTGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR-3UTR TCA 90 bp | TACTTTGTAGCCTATAAATCTGCATTGTGTCTGCAGCAGCAGCCCCTGGCCACAATGCAACTATGGCACTaGGAAAGAAAAGCAATATTG | + |
|
Preference number: 2 (lower is better) Translates to: YFVAYKSALCLQQQPLATMQLWH*ERKAIL Trigger: CAATATTGCTTTTCTTTCTCAGTGCCATAGTTGCAT...TGTGGCCAGGGGCTGCTGCTGCAGACACAATGCAGATTTATAGGCTACAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCAGCCTTGGGAAGCAAAACAGCTGTCAGTTTGCAAAACACAGATATTCTCATCTCAAGAGACAAATaGGAAGCCCAAGGATGGACC | + |
|
Preference number: 2 (lower is better) Translates to: KAALGSKTAVSLQNTDILISRDK*EAQGWT Trigger: GGTCCATCCTTGGGCTTCTCATTTGTCTCTTGAGAT...GAGAATATCTGTGTTTTGCAAACTGACAGCTGTTTTGCTTCCCAAGGCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGGTGTCTTCAATTATTTaGACACTGCCCTGTAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: SLSLSLSRQCIVCLLLFKVSSII*TLPCNY Trigger: ATAATTACAGGGCAGTGTGCAAATAATTGAAGACAC...CTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR-3UTR GCA 90 bp | TACTTTGTAGCCTATAAATCTGCATTGTGTCTGCAGCAGCAGCCCCTGGCCACAGTGATTACACTAATGTaGCCAATGTTAACTATAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YFVAYKSALCLQQQPLATVITLM*PMLTIA Trigger: GGCTATAGTTAACATTGGGCACATTAGTGTAATCAC...TGTGGCCAGGGGCTGCTGCTGCAGACACAATGCAGATTTATAGGCTACAAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGATCTTTTCGCTATTTGCATTTTTACTACCTACTTCCAACTTTACTAGGAGAATCACGGCTCCTCTaGAGGGGTGGATGTCAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TGSFRYLHFYYLLPTLLGESRLL*RGGCQK Trigger: CTTCTGACATCCACCCCTTCAGAGGAGCCGTGATTC...TCCTAGTAAAGTTGGAAGTAGGTAGTAAAAATGCAAATAGCGAAAAGATCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTACTGCTTGTTGTGTGTCAGTGGTTTTCTTGATCCACAGGAGTAAAACCCCTCAATTGACACAATaGTCCAGAAGATCCTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: DLTACCVSVVFLIHRSKTPQLTQ*SRRSCC Trigger: ACAGCAGGATCTTCTGGAGCATTGTGTCAATTGAGG...GGTTTTACTCCTGTGGATCAAGAAAACCACTGACACACAACAAGCAGTAAGATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 90 bp | ACAGAGAGTGTGAACTGGGAGGAGCTGAACATTACTGAACTAACATaGTCTACCACATATGCATTCTACAGACCACTGCACATAAACTCA | + |
|
Preference number: 2 (lower is better) Translates to: TESVNWEELNITELT*STTYAFYRPLHINS Trigger: TGAGTTTATGTGCAGTGGTCTGTAGAATGCATATGTGGTAGACAATGTTAGTTCAGTAATGTTCAGCTCCTCCCAGTTCACACTCTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR GCA 90 bp | CATTCCCAGAGGAATAGGAAGCCTTTTGTGACTCCGAGTACTTTGATACTGAACATTGTCTACCACATATaGATTCTACAGACCACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HSQRNRKPFVTPSTLILNIVYHI*ILQTTA Trigger: TGCAGTGGTCTGTAGAATGCATATGTGGTAGACAAT...GTTCAGTATCAAAGTACTCGGAGTCACAAAAGGCTTCCTATTCCTCTGGGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCAGCCTTGGGAAGCAAAACAGCTGTCAGTTTGCAAAACACAGATATTCTCTATCTATGTAGCAACTaGACAGAGGTGAGCAAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: KAALGSKTAVSLQNTDILYLCSN*TEVSKV Trigger: TACTTTGCTCACCTCTGTTCAGTTGCTACATAGATA...GAGAATATCTGTGTTTTGCAAACTGACAGCTGTTTTGCTTCCCAAGGCTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGACTCTATTTAGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGCGGCAGTGCATTGTGTaGCTGCTTCTCTTCAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: KTLFSRKELYDYLIPKGMRQCIV*LLLFKH Trigger: ATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCG...CATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACTAAATAGAGTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CCA 90 bp | AACATCTGCATCTCTCATCTTATTCTGGTCTCGGTCAGGATGCCACTATCTTCAAGAAAAGGCGCTAGATaGCTCCTTAATTTTGTTACA | + |
|
Preference number: 2 (lower is better) Translates to: NICISHLILVSVRMPLSSRKGAR*LLNFVT Trigger: TGTAACAAAATTAAGGAGCCATCTAGCGCCTTTTCT...TGAAGATAGTGGCATCCTGACCGAGACCAGAATAAGATGAGAGATGCAGATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR GCA 90 bp | GATCTTACTGCTTGTTGTGTGTCAGTGGTTTTCTTGATCCACAGGAGTAAAACCGGCTTGGCTTATTTCTaGAATCATAGCTTGCATTTT | + |
|
Preference number: 2 (lower is better) Translates to: DLTACCVSVVFLIHRSKTGLAYF*NHSLHF Trigger: AAAATGCAAGCTATGATTGCAGAAATAAGCCAAGCC...GGTTTTACTCCTGTGGATCAAGAAAACCACTGACACACAACAAGCAGTAAGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR GCA 90 bp | CTACTAGAAAATTGTAATACCTTTGGGGCTCACATTACATTTCCATTGAACACCGGTCTACTCTCAAGTTaGATTTGGCTCATGTCACAC | + |
|
Preference number: 2 (lower is better) Translates to: LLENCNTFGAHITFPLNTGLLSS*IWLMSH Trigger: GTGTGACATGAGCCAAATGCAACTTGAGAGTAGACC...GGTGTTCAATGGAAATGTAATGTGAGCCCCAAAGGTATTACAATTTTCTAGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR TCA 90 bp | CTACTAGAAAATTGTAATACCTTTGGGGCTCACATTACATTTCCATTGAACACCTGGTTCTGCATCTGCTaGCACCTTGAGACATTTATT | + |
|
Preference number: 2 (lower is better) Translates to: LLENCNTFGAHITFPLNTWFCIC*HLETFI Trigger: AATAAATGTCTCAAGGTGTCAGCAGATGCAGAACCA...GGTGTTCAATGGAAATGTAATGTGAGCCCCAAAGGTATTACAATTTTCTAGTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR TCA 90 bp | AAGACTCTATTTAGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGCAAGTGGACAATACTTaGTCAATAAACCTGTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KTLFSRKELYDYLIPKGMQVDNT*SINLCS Trigger: GGAGCACAGGTTTATTGATCAAGTATTGTCCACTTG...CATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACTAAATAGAGTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR CAA 90 bp | TACACTTTTTACTCCCTAAACACAAGAGTTCAGTATAAGATAACCTaGTACCACACATTGAAGTTAGAAAGGCACTCAACACAATGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: YTFYSLNTRVQYKIT*YHTLKLERHSTQCR Trigger: TCTACATTGTGTTGAGTGCCTTTCTAACTTCAATGTGTGGTACAAGGTTATCTTATACTGAACTCTTGTGTTTAGGGAGTAAAAAGTGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR CAA 90 bp | ACCCTTGATGTCTTCAAAGTTTTGTCTCACTTAATAATCAGAGAATaGCTATCCAAGTACATGTGTGTATGTGAAGATGTTTTCACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: TLDVFKVLSHLIIRE*LSKYMCVCEDVFTA Trigger: TGCAGTGAAAACATCTTCACATACACACATGTACTTGGATAGCAATTCTCTGATTATTAAGTGAGACAAAACTTTGAAGACATCAAGGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGGCCACACGTGGAGCCTGAGGGCATGAAACATGGCTGCAGTGGAGGGGCAAGGTCAGGGTCAGCTTaGTGGCTCATGCTCTTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: PWPHVEPEGMKHGCSGGARSGSA*WLMLLF Trigger: GAACAAGAGCATGAGCCACAAAGCTGACCCTGACCT...TGCCCCTCCACTGCAGCCATGTTTCATGCCCTCAGGCTCCACGTGTGGCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | CCAGCCTCTAGTTGTTTCGTGGTGACAGGGATGGCCTaGGAGGGTCGAGATGTAGGGAGCCTGAGAATTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PASSCFVVTGMA*EGRDVGSLRIP Trigger: GGGAATTCTCAGGCTCCCTACATCTCGACCCTCTCAGGCCATCCCTGTCACCACGAAACAACTAGAGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | TGTACACACAGAGGAATCACGGCTCCTCTGAAGGGGTaGATGTCAGAAGGAAGGAGACTGGACCCATCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: CTHRGITAPLKG*MSEGRRLDPSP Trigger: GGGGGATGGGTCCAGTCTCCTTCCTTCTGACATCCACCCCTTCAGAGGAGCCGTGATTCCTCTGTGTGTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | CCTATAAATCTGCATTGTGTCTGCAGCAGCAGCCCCTaGCCACACGTGGAGCCTGAGGGCATGAAACATGGC | + |
|
Preference number: 3 (lower is better) Translates to: PINLHCVCSSSP*PHVEPEGMKHG Trigger: GCCATGTTTCATGCCCTCAGGCTCCACGTGTGGCCAGGGGCTGCTGCTGCAGACACAATGCAGATTTATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCAAGTGCTTCTGCGGGTGGAGTCCGTCCACTTCCATaGCCTGAGATAGTTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: VAIVFSELQSAPSASAGGVRPLP*PEIVEG Trigger: GCCCTCAACTATCTCAGGCAATGGAAGTGGACGGAC...TCCACCCGCAGAAGCACTTGGCGCTGACTGCAGTTCTGAGAACACAATGGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| 3UTR GCA 72 bp | AGTACAAGCGTCCACCAGAGCAAGGAAGGAGGGGTTTaGCTTTCCTTCTGTCCCTCCACCTGCAATGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: STSVHQSKEGGV*LSFCPSTCNAH Trigger: ATGTGCATTGCAGGTGGAGGGACAGAAGGAAAGGCAAACCCCTCCTTCCTTGCTCTGGTGGACGCTTGTACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | TCAAAGCTGATACCCAGCCTGGCCACTGGGAAGGAGTaGCTGGGAGACAGGAGCTACGTTGTTTGTTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: SKLIPSLATGKE*LGDRSYVVCSC Trigger: ACATGAACAAACAACGTAGCTCCTGTCTCCCAGGCACTCCTTCCCAGTGGCCAGGCTGGGTATCAGCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAAGTGGCTGACGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAATTCCTGGGAATAGCCTaGCTTGCTAGAGTCACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: REVADVLPSTRVAIVFSEFLGIA*LARVTQ Trigger: CTGAGTGACTCTAGCAAGCAAGGCTATTCCCAGGAA...TTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACGTCAGCCACTTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| 3UTR TCA 72 bp | CTGAGCAAAGAGGCTACAAGGGAGTTTTGGATCCCGTaGGGCAGGCGCTACAGATGGAACTGGGAATCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LSKEATREFWIP*GRRYRWNWESS Trigger: ACTTGATTCCCAGTTCCATCTGTAGCGCCTGCCTCACGGGATCCAAAACTCCCTTGTAGCCTCTTTGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTGACGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACTGCAGTCAATTGGCATACCTGACTaGCTCTACGTTCCGACAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ADVLPSTRVAIVFSELQSIGIPD*LYVPTS Trigger: ACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAAT...TGACTGCAGTTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR TCA 72 bp | CAAATGACTGCTTCTAGGGGATGCTGGAGTGTCCTGTaGGTAGTCGGCACATTGCACCAACGACACGTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: QMTASRGCWSVL*VVGTLHQRHVY Trigger: ATACACGTGTCGTTGGTGCAATGTGCCGACTACTCACAGGACACTCCAGCATCCCCTAGAAGCAGTCATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | ACAGACTGCCATACCAGGCAAAGTGGTATCTGTCAGTaGGGACAGCTATTCCCAGGAGAACAAGCCAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: TDCHTRQSGICQ*GQLFPGEQASH Trigger: GTGACTGGCTTGTTCTCCTGGGAATAGCTGTCCTCACTGACAGATACCACTTTGCCTGGTATGGCAGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCAGTaGATTGTGTGCCTGCTTCTCTTCAAGCATAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLSLSLSRQ*IVCLLLFKHRL Trigger: TAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCTGTATGCATTGGCATACCTGACTTGCTCTACGTTCCGACAAGTGGACAAGTCCGTCCACTTCCATaGCCTGAGATAGTTGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FPVCIGIPDLLYVPTSGQVRPLP*PEIVEG Trigger: GCCCTCAACTATCTCAGGCAATGGAAGTGGACGGAC...TTGTCCACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAATGCATACAGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGTGAGCTCTCAGCTGCTGAGCCACCTCTCCAGCCCCTTCCTTCTTTGCCTGAACTGTTGCTATTaGCACCCCATTTATATCACT | + |
|
Preference number: 3 (lower is better) Translates to: SSVSSQLLSHLSSPFLLCLNCCY*HPIYIT Trigger: AGTGATATAAATGGGGTGCAAATAGCAACAGTTCAG...GCAAAGAAGGAAGGGGCTGGAGAGGTGGCTCAGCAGCTGAGAGCTCACTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | TCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTaGTTCTCTTCAAGCATAGGCTACACAGCTTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSLGSALCA*FSSSIGYTAFV Trigger: CACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | TCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTaGCTGCTTCTCTTCAAGCATAGGCTACACAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLSLSRQCIV*LLLFKHRLHSF Trigger: AAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | GAGAGGGCCCAGATCGATGTAAGTGGTGTCACCCCTTaGGCTCCTAACAAGAAAATTGAACAAGCAAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: ERAQIDVSGVTP*APNKKIEQASH Trigger: ATGGCTTGCTTGTTCAATTTTCTTGTTAGGAGCCCAAGGGGTGACACCACTTACATCGATCTGGGCCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGTGAGCTCTCAGCTGCTGAGCCACCTCTCCAGCCCCTTCCTTCTTTGCTACCACAAGTGTACTTaGCACATACCTTTGTACAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSVSSQLLSHLSSPFLLCYHKCT*HIPLYK Trigger: TTTGTACAAAGGTATGTGCAAAGTACACTTGTGGTA...GCAAAGAAGGAAGGGGCTGGAGAGGTGGCTCAGCAGCTGAGAGCTCACTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | CTGACTTGCTCTACGTTCCGACAAGTGGACAATACTTaGTCAATAAACCTGTGCTCCATCTCCAGGCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: LTCSTFRQVDNT*SINLCSISRPR Trigger: CCTAGGCCTGGAGATGGAGCACAGGTTTATTGATCAAGTATTGTCCACTTGTCGGAACGTAGAGCAAGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| 3UTR GCA 72 bp | CTTTCACTGACTCAGAGTCACCAGCCATTTCCTGTATaGATTGGCATACCTGACTTGCTCTACGTTCCGACA | + |
|
Preference number: 3 (lower is better) Translates to: LSLTQSHQPFPV*IGIPDLLYVPT Trigger: TGTCGGAACGTAGAGCAAGTCAGGTATGCCAATGCATACAGGAAATGGCTGGTGACTCTGAGTCAGTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR CCA 72 bp | GATCTATCTCCTGGGGCCAGTAGAAAAATTTCTTCATaGTTTCCTAAGTGTCACCCAGCCAAGCAGTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: DLSPGASRKISS*FPKCHPAKQSA Trigger: GGCAGACTGCTTGGCTGGGTGACACTTAGGAAACCATGAAGAAATTTTTCTACTGGCCCCAGGAGATAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | AAGCATGAGCTCATTACAGACTATGTGTGCTGGGGGTaGGGGAGCAAAGACATTGCTTGTGTTTGCAGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KHELITDYVCWG*GSKDIACVCSF Trigger: GAAACTGCAAACACAAGCAATGTCTTTGCTCCCCCACCCCCAGCACACATAGTCTGTAATGAGCTCATGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATAGGCTAACCTTGTACCACACATaGAAGTTAGAAAGGCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSRQCIVCLLLFKHRLTLYHT*KLERHS Trigger: TGAGTGCCTTTCTAACTTCAATGTGTGGTACAAGGT...TAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTGTGTTCTCAGAACTGCAGTCAGCGCCAAGTGCTTCTGCGGGTGGATTAACAAGTGGACAATACTaGATCAATAAACCTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: AIVFSELQSAPSASAGGLTSGQY*INKPVL Trigger: GAGCACAGGTTTATTGATCAAGTATTGTCCACTTGT...TAATCCACCCGCAGAAGCACTTGGCGCTGACTGCAGTTCTGAGAACACAATGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTGGAGGAACATCTGCTGACCATTGATTTCTCTGAGGCTCTGAAGAGGGAGCTTTACTGGAGGAGGTaGTCTGTCAAGAAAATTGTC | + |
|
Preference number: 3 (lower is better) Translates to: SVEEHLLTIDFSEALKRELYWRR*SVKKIV Trigger: GACAATTTTCTTGACAGACAACCTCCTCCAGTAAAG...CTCCCTCTTCAGAGCCTCAGAGAAATCAATGGTCAGCAGATGTTCCTCCACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | GAGTCACCAGCCATTTCCTGTATGCATTGGCATACCTaGCTTGCTCTACGTTCCGACAAGTGGACAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: ESPAISCMHWHT*LALRSDKWTIL Trigger: AAGTATTGTCCACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAATGCATACAGGAAATGGCTGGTGACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR GCA 72 bp | AGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCAAGTaGTTCTGCGGGTGGATTAATATTCTTAAGCTGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SHCVLRTAVSAK*FCGWINILKLN Trigger: GTTCAGCTTAAGAATATTAATCCACCCGCAGAAGCACTTGGCGCTGACTGCAGTTCTGAGAACACAATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | AGGTCCACAGTTCAAGTTGGGGATCAGGATGATTCCTaGACAAATGCACATCAACAAGTCCCTAAAGGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RSTVQVGDQDDS*TNAHQQVPKGQ Trigger: TTGGCCTTTAGGGACTTGTTGATGTGCATTTGTGCAGGAATCATCCTGATCCCCAACTTGAACTGTGGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | TCTAATAAGCATGAGCTCATTACAGACTATGTGTGCTaGGGGTGGGGGAGCAAAGACATTGCTTGTGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SNKHELITDYVC*GWGSKDIACVC Trigger: GCAAACACAAGCAATGTCTTTGCTCCCCCACCCCCAGCACACATAGTCTGTAATGAGCTCATGCTTATTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | TTACACATGGGAGCTCTCCTTAAGAACAGCAGAGCTAGCCCACATCACTCACTTGCCAAACATGATGGCTaGGCTTATTTCTGCAATCAT | + |
|
Preference number: 3 (lower is better) Translates to: LHMGALLKNSRASPHHSLAKHDG*AYFCNH Trigger: ATGATTGCAGAAATAAGCCAAGCCATCATGTTTGGC...AAGTGAGTGATGTGGGCTAGCTCTGCTGTTCTTAAGGAGAGCTCCCATGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | CCAAGTGCTTCTGCGGGTGGATTAATATTCTTAAGCTaGACTGACTTGCTCTACGTTCCGACAAGTGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: PSASAGGLIFLS*TDLLYVPTSGQ Trigger: TTGTCCACTTGTCGGAACGTAGAGCAAGTCAGTTCAGCTTAAGAATATTAATCCACCCGCAGAAGCACTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235740.2 |
||
| 3UTR GCA 72 bp | GTAGGGCGGGGTTATGGTGAAGATCATAGATCTTACTaGTTGTTGTGTGTCAGTGGTTTTCTTGATCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: VGRGYGEDHRSY*LLCVSGFLDPQ Trigger: CTGTGGATCAAGAAAACCACTGACACACAACAAGCAGTAAGATCTATGATCTTCACCATAACCCCGCCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | TTCTCTAATAAGCATGAGCTCATTACAGACTATGTGTaGTGGGGGTGGGGGAGCAAAGACATTGCTTGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: FSNKHELITDYV*WGWGSKDIACV Trigger: AACACAAGCAATGTCTTTGCTCCCCCACCCCCAGCACACATAGTCTGTAATGAGCTCATGCTTATTAGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | GCCCTTGTTGCTGAGATAGAGCTACAGCGTGCACTTTaGTACTTATCCCTGATGAATTCAGTATCAAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALVAEIELQRAL*YLSLMNSVSKS Trigger: GCTCTTTGATACTGAATTCATCAGGGATAAGTACCAAAGTGCACGCTGTAGCTCTATCTCAGCAACAAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGATCTTTTCGCTATTTGCATTTTTACTACCTACTTCCAACTTTACTAGGACCGACTTCTCCAGCCTaGAGAGCACAGCCCTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: TGSFRYLHFYYLLPTLLGPTSPA*RAQPLL Trigger: CAACAAGGGCTGTGCTCTCAAGGCTGGAGAAGTCGG...TCCTAGTAAAGTTGGAAGTAGGTAGTAAAAATGCAAATAGCGAAAAGATCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | CACTTCTGTAACCAACACAAAGCCGCCTGCCTTAAATaGATGACATTGAATGTGAGGACAAATGACTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HFCNQHKAACLK*MTLNVRTNDCF Trigger: GAAGCAGTCATTTGTCCTCACATTCAATGTCATGCATTTAAGGCAGGCGGCTTTGTGTTGGTTACAGAAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | TGCTTCTGCGGGTGGATTAATATTCTTAAGCTGAACTaGCTTGCTCTACGTTCCGACAAGTGGACAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: CFCGWINILKLN*LALRSDKWTIL Trigger: AAGTATTGTCCACTTGTCGGAACGTAGAGCAAGTCAGTTCAGCTTAAGAATATTAATCCACCCGCAGAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235740.2 |
||
| 3UTR TCA 72 bp | CACAGAGAGTGTGAACTGGGAGGAGCTGAACATTACTaGACTAACATTGTCTACCACATATGCATTCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: HRECELGGAEHY*TNIVYHICILQ Trigger: CTGTAGAATGCATATGTGGTAGACAATGTTAGTTCAGTAATGTTCAGCTCCTCCCAGTTCACACTCTCTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | ACCACATTAGTTACAACAAACACACACCCTGCTCTTTaGAATGATGCAAACATAAACTGCACAGCCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TTLVTTNTHPAL*NDANINCTACF Trigger: GAAGCAGGCTGTGCAGTTTATGTTTGCATCATTCCAAAGAGCAGGGTGTGTGTTTGTTGTAACTAATGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGATCTTTTCGCTATTTGCATTTTTACTACCTACTTCCAACTTTACTAGGATCTCTCGGCAGTGCATaGTGTGCCTGCTTCTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGSFRYLHFYYLLPTLLGSLGSA*CACFSS Trigger: TGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGA...TCCTAGTAAAGTTGGAAGTAGGTAGTAAAAATGCAAATAGCGAAAAGATCCTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | ATATGCACTAAGCATGCAACTCAAGCTGGTATGCTTTaGAGAAACAGGACAGACTTTAGTGAAGACCGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ICTKHATQAGML*RNRTDFSEDRR Trigger: TCTTCGGTCTTCACTAAAGTCTGTCCTGTTTCTTCAAAGCATACCAGCTTGAGTTGCATGCTTAGTGCATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | TTGAAGGACACTGTTTCTTCAGCAGAGCAACCTAACTaGCTTTTCTTTTTAAACCACCAGCCTCTAGTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LKDTVSSAEQPN*LFFLNHQPLVV Trigger: AACAACTAGAGGCTGGTGGTTTAAAAAGAAAAGGCAGTTAGGTTGCTCTGCTGAAGAAACAGTGTCCTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | ACACACCCTGCTCTTTGGAATGATGCAAACATAAACTaGACAGCCTGCTTCCTATACAAACATGCATTGATA | + |
|
Preference number: 3 (lower is better) Translates to: THPALWNDANIN*TACFLYKHALI Trigger: TATCAATGCATGTTTGTATAGGAAGCAGGCTGTGCAGTTTATGTTTGCATCATTCCAAAGAGCAGGGTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CCA 72 bp | CTGACACATACTATATCAAAGGTAAGCCCTATTACTTaGGACATAAGACGGATGCTGAGAAGAGAAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LTHTISKVSPIT*DIRRMLRREGK Trigger: CTTACCTTCTCTTCTCAGCATCCGTCTTATGTCCCAAGTAATAGGGCTTACCTTTGATATAGTATGTGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGCCGGCTCTTAACACAAGTGGACAATACTaGATCAATAAACCTGTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SRKELYDYLIPKGMPALNTSGQY*INKPVL Trigger: GAGCACAGGTTTATTGATCAAGTATTGTCCACTTGT...GTTAAGAGCCGGCATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR TCA 72 bp | TGGCTTCTGGTGATAATCTGTACACATTTACTTCTATaGCTGATAATAAATCTCAGCTTGAGCCTCAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: WLLVIICTHLLL*LIINLSLSLST Trigger: GGTGCTGAGGCTCAAGCTGAGATTTATTATCAGTCATAGAAGTAAATGTGTACAGATTATCACCAGAAGCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | ATTAGTTACAACAAACACACACCCTGCTCTTTGGAATaGTGCAAACATAAACTGCACAGCCTGCTTCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: ISYNKHTPCSLE*CKHKLHSLLPI Trigger: TATAGGAAGCAGGCTGTGCAGTTTATGTTTGCATCATTCCAAAGAGCAGGGTGTGTGTTTGTTGTAACTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | AAGCAAGGTAATGAAGACAGCAAATCTAAATCTCACTaGTTTTTACACATGGGAGCTCTCCTTAAGAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: KQGNEDSKSKSH*FLHMGALLKNS Trigger: GCTGTTCTTAAGGAGAGCTCCCATGTGTAAAAATCAGTGAGATTTAGATTTGCTGTCTTCATTACCTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | AATTTCTCACAATATGCACAGCACTATGTGATATACTaGACCTGTCTGTCTTGCATCTTACACTTGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NFSQYAQHYVIY*TCLSCILHLQR Trigger: TCTCTGCAAGTGTAAGATGCAAGACAGACAGGTTCAGTATATCACATAGTGCTGTGCATATTGTGAGAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | GCTACACAGCTTTTGTGTCTTCAATTATTTGCACACTaGCCTGTAATTATGATGCCTCTAAAACTCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ATQLLCLQLFAH*PVIMMPLKLTM Trigger: CATTGTGAGTTTTAGAGGCATCATAATTACAGGGCAGTGTGCAAATAATTGAAGACACAAAAGCTGTGTAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | AGCATAGGCTACACAGCTTTTGTGTCTTCAATTATTTaGACACTGCCCTGTAATTATGATGCCTCTAAAACT | + |
|
Preference number: 3 (lower is better) Translates to: SIGYTAFVSSII*TLPCNYDASKT Trigger: AGTTTTAGAGGCATCATAATTACAGGGCAGTGTGCAAATAATTGAAGACACAAAAGCTGTGTAGCCTATGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | CATTTATATCACTTCTGTAACCAACACAAAGCCGCCTaGCTTAAATGCATGACATTGAATGTGAGGACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: HLYHFCNQHKAA*LKCMTLNVRTN Trigger: ATTTGTCCTCACATTCAATGTCATGCATTTAAGGCAGGCGGCTTTGTGTTGGTTACAGAAGTGATATAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | GCTCTTTGGAATGATGCAAACATAAACTGCACAGCCTaGTTCCTATACAAACATGCATTGATAATAGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: ALWNDANINCTA*FLYKHALIIAY Trigger: ATATGCTATTATCAATGCATGTTTGTATAGGAAGCAGGCTGTGCAGTTTATGTTTGCATCATTCCAAAGAGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR GCA 72 bp | TCTGCATCTCTCATCTTATTCTGGTCTCGGTCAGGATaGCACTATCTTCAGGATTTTAACATTTTATTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SASLILFWSRSG*HYLQDFNILFL Trigger: TAGAAATAAAATGTTAAAATCCTGAAGATAGTGGCATCCTGACCGAGACCAGAATAAGATGAGAGATGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGGATCTTTTCGCTATTTGCATTTTTACTACCTACTTCCAACTTTACTAGGAGTAGTAAAAACAACTTaGCCCCCAAAGAGTAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: TGSFRYLHFYYLLPTLLGVVKTT*PPKSKI Trigger: GATCTTACTCTTTGGGGGCAAAGTTGTTTTTACTAC...TCCTAGTAAAGTTGGAAGTAGGTAGTAAAAATGCAAATAGCGAAAAGATCCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | GATTTGTTAATTTCTCACAATATGCACAGCACTATGTaGTATACTGAACCTGTCTGTCTTGCATCTTACACT | + |
|
Preference number: 3 (lower is better) Translates to: DLLISHNMHSTM*YTEPVCLASYT Trigger: AGTGTAAGATGCAAGACAGACAGGTTCAGTATATCACATAGTGCTGTGCATATTGTGAGAAATTAACAAATC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | TTTAAAGAAACTATCTATGTAGCAACTGAACAGAGGTaGGCAAAGTATGTAAGCCAATCTCAAGAGACAAAT | + |
|
Preference number: 3 (lower is better) Translates to: FKETIYVATEQR*AKYVSQSQETN Trigger: ATTTGTCTCTTGAGATTGGCTTACATACTTTGCTCACCTCTGTTCAGTTGCTACATAGATAGTTTCTTTAAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
||
| 3UTR TCA 72 bp | AATCAGAGAATTGCTATCCAAGTACATGTGTGTATGTaGAGATGTTTTCACTGCACAGGCAAAATAAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: NQRIAIQVHVCM*RCFHCTGKINK Trigger: TTTGTTTATTTTGCCTGTGCAGTGAAAACATCTTCACATACACACATGTACTTGGATAGCAATTCTCTGATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR TCA 90 bp | ATCTCCAGGCCTAGGGAGTCTGGAGCTGGGGTCCGCTTCAGGCGCTTGGTTTCCAGGGCAGTCTGCAGGTaGCAGGTGAGTCAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ISRPRESGAGVRFRRLVSRAVCR*QVSQVG Trigger: CCCAACCTGACTCACCTGTCACCTGCAGACTGCCCT...GGAAACCAAGCGCCTGAAGCGGACCCCAGCTCCAGACTCCCTAGGCCTGGAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR GCA 90 bp | ATCTCCAGGCCTAGGGAGTCTGGAGCTGGGGTCCGCTTCAGGCGCTTGGTTTCCGCTGGGATATCTCCCTaGTGCTTCACTGCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISRPRESGAGVRFRRLVSAGISP*CFTADF Trigger: GAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGC...GGAAACCAAGCGCCTGAAGCGGACCCCAGCTCCAGACTCCCTAGGCCTGGAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR CCA 90 bp | GGCCTAGGGAGTCTGGAGCTGGGGTCCGCTTCAGGCGCTTGGTTTCCTGGGAATCCTTCAGATCCAGCTTaGCCACGTTCTGTAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSLELGSASGAWFPGNPSDPA*PRSVKP Trigger: GGGTTTTACAGAACGTGGCCAAGCTGGATCTGAAGG...ATTCCCAGGAAACCAAGCGCCTGAAGCGGACCCCAGCTCCAGACTCCCTAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCCACACGTGGAGCCTGAGGGCATGAAACATGGCTGCAGTGGAGGGGCATCTTCAGATCCAGCTTaGCCACGTTCTGTAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: PWPHVEPEGMKHGCSGGASSDPA*PRSVKP Trigger: GGGTTTTACAGAACGTGGCCAAGCTGGATCTGAAGA...TGCCCCTCCACTGCAGCCATGTTTCATGCCCTCAGGCTCCACGTGTGGCCAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATCCTTCACCACCCTCTaGACCAGCACCGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSAVHCVPASLQASFTTL*TSTATS Trigger: GGAGGTGGCGGTGCTGGTGCAGAGGGTGGTGAAGGA...TGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | AGTCTGGAGCTGGGGTCCGCTTCAGGCGCTTGGTTTCCTGGGAATAGCCTTGCTACAGGTGAGTCAGGTTaGGAGGGAGCCTGCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLELGSASGAWFPGNSLATGESG*EGACHL Trigger: TAAATGGCAGGCTCCCTCCCAACCTGACTCACCTGT...AGCAAGGCTATTCCCAGGAAACCAAGCGCCTGAAGCGGACCCCAGCTCCAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR CCA 90 bp | GTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCATCCGCTTCAGGCGCTTaGTTTCCTGGGAATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VLPSTRVAIVFSELQSAPSASGA*FPGNSL Trigger: AAGGCTATTCCCAGGAAACCAAGCGCCTGAAGCGGA...TGGCGCTGACTGCAGTTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | GGTCCGCTTCAGGCGCTTGGTTTCCTGGGAATAGCCTaGCTTGCTAGAGTCACTCAGTCCGTCCACTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GPLQALGFLGIA*LARVTQSVHFH Trigger: ATGGAAGTGGACGGACTGAGTGACTCTAGCAAGCAAGGCTATTCCCAGGAAACCAAGCGCCTGAAGCGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR GCA 90 bp | CGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCTCTGTAAAACCCAGATaGGATGGGACCAGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPPIHPCSHCVLRTAVSASVKPR*DGTRHC Trigger: ACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGA...GGCGCTGACTGCAGTTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | CGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCACTCCGGTTATATCTTaGTTCAGGGCATGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPPIHPCSHCVLRTAVSATPVIS*FRAWDQ Trigger: CTGATCCCATGCCCTGAAGCAAGATATAACCGGAGT...GGCGCTGACTGCAGTTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGCCACACGTGGAGCCTGAGGGCATGAAACATGGCTGCAGTGGAGGGGCACGCTGCTTCATCTTTTaGCTCACTTTTCAAAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PWPHVEPEGMKHGCSGGARCFIF*LTFQRV Trigger: AACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGCG...TGCCCCTCCACTGCAGCCATGTTTCATGCCCTCAGGCTCCACGTGTGGCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | AAGTACAAGCGTCCACCAGAGCAAGGAAGGAGGGGTTaGCCTTTCCTTCTGTCCCTCCACCTGCAATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KYKRPPEQGRRG*PFLLSLHLQCT Trigger: TGTGCATTGCAGGTGGAGGGACAGAAGGAAAGGCAAACCCCTCCTTCCTTGCTCTGGTGGACGCTTGTACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | GTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCAAGTGCTTCTGCGGGTGGAACCAGGCATTGTAGTTaGTGGGATATCTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAIVFSELQSAPSASAGGTRHCS*WDISLL Trigger: CAGCAGGGAGATATCCCAGCAACTACAATGCCTGGT...TCCACCCGCAGAAGCACTTGGCGCTGACTGCAGTTCTGAGAACACAATGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAACAGACTATGTGTGCTaGGGGTGGGGGAGCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLGSALCACFSSTDYVC*GWGSKD Trigger: GTCTTTGCTCCCCCACCCCCAGCACACATAGTCTGT...TGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067077.2 |
||
| 3UTR CAA 72 bp | AGGGAGAGGCTCCTCCCTGGTGGGTCTACTCTCAAGTaGCATTTGGCTCATGTCACACACCATCTTGTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RERLLPGGSTLK*HLAHVTHHLVL Trigger: TAGCACAAGATGGTGTGTGACATGAGCCAAATGCAACTTGAGAGTAGACCCACCAGGGAGGAGCCTCTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | ATGAGAGTCTCTGAGCAAAGAGGCTACAAGGGAGTTTaGGATCCCGTGAGGCAGGCGCTACAGATGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: MRVSEQRGYKGV*DPVRQALQMEL Trigger: CAGTTCCATCTGTAGCGCCTGCCTCACGGGATCCAAAACTCCCTTGTAGCCTCTTTGCTCAGAGACTCTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR TCA 90 bp | TTACACATGGGAGCTCTCCTTAAGAACAGCAGAGCTAGCCCACATCACTCACTTGCAGCAGGGTGCAGGTaGCGTCAGCCAGTTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHMGALLKNSRASPHHSLAAGCR*RQPVHL Trigger: AAGATGAACTGGCTGACGTCACCTGCACCCTGCTGC...AAGTGAGTGATGTGGGCTAGCTCTGCTGTTCTTAAGGAGAGCTCCCATGTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATAGCCTTGCTTGCTAGAGTCACTCAGTCCGTCCACTTCCATTGCCTGACCAGGCATTGTAGTTaGTGGGATATCTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGIALLARVTQSVHFHCLTRHCS*WDISLL Trigger: CAGCAGGGAGATATCCCAGCAACTACAATGCCTGGT...CAGGCAATGGAAGTGGACGGACTGAGTGACTCTAGCAAGCAAGGCTATTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATAGCCTTGCTTGCTAGAGTCACTCAGTCCGTCCACTTCCATTGCCTGGGTTGGGAGGGAGCCTaGCATTTAAGTGATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGIALLARVTQSVHFHCLGWEGA*HLSDAE Trigger: TTCAGCATCACTTAAATGGCAGGCTCCCTCCCAACC...CAGGCAATGGAAGTGGACGGACTGAGTGACTCTAGCAAGCAAGGCTATTCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGTGGCTGACGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAATTGGCATACCTGACTTaGTCTACGTTCCGACAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: REVADVLPSTRVAIVFSELAYLT*STFRQV Trigger: CACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAA...TTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACGTCAGCCACTTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGTGGCTGACGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAAAGGCATTGTAGTTGCTaGGATATCTCCCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: REVADVLPSTRVAIVFSERHCSC*DISLLL Trigger: AAGCAGCAGGGAGATATCCCAGCAACTACAATGCCT...TTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACGTCAGCCACTTCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGATTACAGACTATGTGTaGTGGGGGTGGGGGAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSRQCIVCLLLFKITDYV*WGWGSK Trigger: TTTGCTCCCCCACCCCCAGCACACATAGTCTGTAAT...CTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067077.2 |
||
| CDS-3UTR CCA 90 bp | CAAGAGACAAATGAGAAGCCCAAGGATGGACCTAGAGAGCCATGGGTCAAAGAGACAGGTGAGTCAGGTTaGGAGGGAGCCTGCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QETNEKPKDGPREPWVKETGESG*EGACHL Trigger: TAAATGGCAGGCTCCCTCCCAACCTGACTCACCTGT...CTCTTTGACCCATGGCTCTCTAGGTCCATCCTTGGGCTTCTCATTTGTCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | CTCTCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATaGTGTGCCTGCTTCTCTTCAAGCATAGGCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSLSLSLGSA*CACFSSSIGYT Trigger: TGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067077.2 ENSMUST00000237333.2 |
||
| CDS-3UTR TCA 90 bp | GGCCCAAAGCTTCTACAGGAAGGTATAAAAGCCTTAGGTTTACAAAACGACTCAAGGGCAGTCTGCAGGTaGCAGGTGAGTCAGGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPKLLQEGIKALGLQNDSRAVCR*QVSQVG Trigger: CCCAACCTGACTCACCTGTCACCTGCAGACTGCCCT...TGAGTCGTTTTGTAAACCTAAGGCTTTTATACCTTCCTGTAGAAGCTTTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGTGGCTGACGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACAAGTGGACAATACTTaGTCAATAAACCTGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: REVADVLPSTRVAIVFSEQVDNT*SINLCS Trigger: GGAGCACAGGTTTATTGATCAAGTATTGTCCACTTG...TTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACGTCAGCCACTTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | GTTCCGACAAGTGGACAATACTTGATCAATAAACCTGTGCTCCATCTCCAGGCCGCTGGGATATCTCCCTaGTGCTTCACTGCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPTSGQYLINKPVLHLQAAGISP*CFTADF Trigger: GAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGC...GGCCTGGAGATGGAGCACAGGTTTATTGATCAAGTATTGTCCACTTGTCGGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATAGGCTACACAGCTTTTGTGTCGCTGGGATATCTCCCTaGTGCTTCACTGCAGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QCIVCLLLFKHRLHSFCVAGISP*CFTADF Trigger: GAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGC...GACACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | CTCAAGAGACAAATGAGAAGCCCAAGGATGGACCTAGAGAGCCATGGGTCAAAGCCTTCAGATCCAGCTTaGCCACGTTCTGTAAAACCC | + |
|
Preference number: 4 (lower is better) Translates to: LKRQMRSPRMDLESHGSKPSDPA*PRSVKP Trigger: GGGTTTTACAGAACGTGGCCAAGCTGGATCTGAAGG...CTTTGACCCATGGCTCTCTAGGTCCATCCTTGGGCTTCTCATTTGTCTCTTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR CAA 72 bp | ACCAGAGGCCAAAGCCTAATCACACTTGCACTACACTaGGTTCCTCACGGGTCAGGTAGGAATGTCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TRGQSLITLALH*VPHGSGRNVCF Trigger: GAAACAGACATTCCTACCTGACCCGTGAGGAACCAAGTGTAGTGCAAGTGTGATTAGGCTTTGGCCTCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAGAGACAAATGAGAAGCCCAAGGATGGACCTAGAGAGCCATGGGTCAAAGTCTGTAAAACCCAGATaGGATGGGACCAGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKRQMRSPRMDLESHGSKSVKPR*DGTRHC Trigger: ACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGA...CTTTGACCCATGGCTCTCTAGGTCCATCCTTGGGCTTCTCATTTGTCTCTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATAGGCTACACAGCTTTTGTGTCCTGTGGTCTGAGACATaGATGGACGCCCAGTGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QCIVCLLLFKHRLHSFCVLWSET*MDAQCL Trigger: TAAACACTGGGCGTCCATGCATGTCTCAGACCACAG...GACACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCATTCAAAGAGTTGTGCTaGGGTACAGCACTGTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLGSALCACFSSFKELC*GTALSI Trigger: GATAGACAGTGCTGTACCGCAGCACAACTCTTTGAA...TGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCATTTCCTGACATTCCATaGAGTGGTGAAGTCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLGSALCACFSSFPDIP*SGEVWV Trigger: AACCCAGACTTCACCACTGCATGGAATGTCAGGAAA...TGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR TCA 90 bp | GCAGAGCAACCTAACTGCCTTTTCTTTTTAAACCACCAGCCTCTAGTTGTTTCGAAATCCACTGTGGTCTaGGACATGCATGGACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AEQPNCLFFLNHQPLVVSKSTVV*DMHGRP Trigger: TGGGCGTCCATGCATGTCTCAGACCACAGTGGATTT...CGAAACAACTAGAGGCTGGTGGTTTAAAAAGAAAAGGCAGTTAGGTTGCTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGGGGGAGCAAAGACATTaGTTGTGTTTGCAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSRQCIVCLLLFKGEQRH*LCLQFH Trigger: ATGAAACTGCAAACACAAGCAATGTCTTTGCTCCCC...CTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067077.2 |
||
| CDS-3UTR CCA 90 bp | CATTCCCAGAGGAATAGGAAGCCTTTTGTGACTCCGAGTACTTTGATACTGAACACAGGTGAGTCAGGTTaGGAGGGAGCCTGCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: HSQRNRKPFVTPSTLILNTGESG*EGACHL Trigger: TAAATGGCAGGCTCCCTCCCAACCTGACTCACCTGT...GTTCAGTATCAAAGTACTCGGAGTCACAAAAGGCTTCCTATTCCTCTGGGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATAGGCTACACAGCTTTTGTGTCTCAACCAGGACAATaGGACTCCGGTTATATCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSALCACFSSSIGYTAFVSQPGQ*DSGYIL Trigger: CAAGATATAACCGGAGTCCCATTGTCCTGGTTGAGA...CACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCATAGGCTACACAGCTTTTGTGTCTTCAATTATTTGCACACTGCCCTGCACCTAAGCTTCCTTTaGCCACAGAGGAGGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FKHRLHSFCVFNYLHTALHLSFL*PQRRAG Trigger: TCCTGCCCTCCTCTGTGGCCAAAGGAAGCTTAGGTG...CAGGGCAGTGTGCAAATAATTGAAGACACAAAAGCTGTGTAGCCTATGCTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAGCATAGGCTACACAGCTTTTGTGTCTTCAATTATTTGCACACTGCCCTGTATGTGTGCTGGGGGTaGGGGAGCAAAGACATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FKHRLHSFCVFNYLHTALYVCWG*GSKDIA Trigger: AGCAATGTCTTTGCTCCCCCACCCCCAGCACACATA...CAGGGCAGTGTGCAAATAATTGAAGACACAAAAGCTGTGTAGCCTATGCTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000067077.2 |
||
| CDS-3UTR CCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCATTGGATGACAGTATGTaGAATTCTTGGGGTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLGSALCACFSSLDDSM*NSWGRF Trigger: AAAACGACCCCAAGAATTCCACATACTGTCATCCAA...TGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067077.2 |
||
| 3UTR CAA 72 bp | CACCAGCCATTTCCTGTATGCATTGGCATACCTGACTaGCTCTACGTTCCGACAAGTGGACAATACTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: HQPFPVCIGIPD*LYVPTSGQYLI Trigger: GATCAAGTATTGTCCACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAATGCATACAGGAAATGGCTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099560.5 |
||
| 3UTR CAA 72 bp | GGGCGGGGTTATGGTGAAGATCATAGATCTTACTGCTaGTTGTGTGTCAGTGGTTTTCTTGATCCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GRGYGEDHRSYC*LCVSGFLDPQE Trigger: CTCCTGTGGATCAAGAAAACCACTGACACACAACAAGCAGTAAGATCTATGATCTTCACCATAACCCCGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | AGGCTCCTCCCTGGTGGGTCTACTCTCAAGTTGCATTaGGCTCATGTCACACACCATCTTGTGCTAAATAAA | + |
|
Preference number: 4 (lower is better) Translates to: RLLPGGSTLKLH*AHVTHHLVLNK Trigger: TTTATTTAGCACAAGATGGTGTGTGACATGAGCCAAATGCAACTTGAGAGTAGACCCACCAGGGAGGAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGCCTTGGGAAGCAAAACAGCTGTCAGTTTGCAAAACACAGATATTCTCACCAGGCATTGTAGTTaGTGGGATATCTCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAALGSKTAVSLQNTDILTRHCS*WDISLL Trigger: CAGCAGGGAGATATCCCAGCAACTACAATGCCTGGT...GAGAATATCTGTGTTTTGCAAACTGACAGCTGTTTTGCTTCCCAAGGCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | GCAGAGCAACCTAACTGCCTTTTCTTTTTAAACCACCAGCCTCTAGTTGTTTCGTCTTCTTCTAGGAGCTaGGGAAGATTCACACTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: AEQPNCLFFLNHQPLVVSSSSRS*GRFTLG Trigger: GCCAAGTGTGAATCTTCCCCAGCTCCTAGAAGAAGA...CGAAACAACTAGAGGCTGGTGGTTTAAAAAGAAAAGGCAGTTAGGTTGCTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAACTATACGATTATCTCATACCCAAAGGAATGCCGGCTCTTAACAAAAGGTTGGGAGGGAGCCTaGCATTTAAGTGATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRNYTIISYPKECRLLTKGWEGA*HLSDAE Trigger: TTCAGCATCACTTAAATGGCAGGCTCCCTCCCAACC...TTTTGTTAAGAGCCGGCATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATAGGCTACACAGCTTTTGTGTCGTGAATCCATGTCTCTaGACTCTTAGGAAACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QCIVCLLLFKHRLHSFCVVNPCL*TLRKLS Trigger: ACTAAGTTTCCTAAGAGTCCAGAGACATGGATTCAC...GACACAAAAGCTGTGTAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | GTGAACTGGGAGGAGCTGAACATTACTGAACTAACATaGTCTACCACATATGCATTCTACAGACCACTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNWEELNITELT*STTYAFYRPLH Trigger: GTGCAGTGGTCTGTAGAATGCATATGTGGTAGACAATGTTAGTTCAGTAATGTTCAGCTCCTCCCAGTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | TGCACAGCACTATGTGATATACTGAACCTGTCTGTCTaGCATCTTACACTTGCAGAGAAAAAGCAGCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CTALCDILNLSV*HLTLAEKKQPW Trigger: CCAAGGCTGCTTTTTCTCTGCAAGTGTAAGATGCAAGACAGACAGGTTCAGTATATCACATAGTGCTGTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | GGCGTGCCAGCCACGTTACTAGTACTAACCATGCATTaGGAGAAACATGCTGTTAAACAGTATGATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVPATLLVLTMH*EKHAVKQYDFP Trigger: TGGGAAATCATACTGTTTAACAGCATGTTTCTCCAAATGCATGGTTAGTACTAGTAACGTGGCTGGCACGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGATCTTTTCGCTATTTGCATTTTTACTACCTACTTCCAACTTTACTAGGATTCGGAAGGCGTTGGTaGTGTCCTTCACCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGSFRYLHFYYLLPTLLGFGRRW*CPSPPS Trigger: AGAGGGTGGTGAAGGACATCACCAACGCCTTCCGAA...TCCTAGTAAAGTTGGAAGTAGGTAGTAAAAATGCAAATAGCGAAAAGATCCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | GGAAGGAACTATACGATTATCTCATACCCAAAGGAATGCCGGCTCTTAACAAAATCTGTAAAACCCAGATaGGATGGGACCAGGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRNYTIISYPKECRLLTKSVKPR*DGTRHC Trigger: ACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGA...TTTTGTTAAGAGCCGGCATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | AAACATGATGGCTTGGCTTATTTCTGCAATCATAGCTaGCATTTTGCACATACACAGGATCCGAGCCAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KHDGLAYFCNHS*HFAHTQDPSQL Trigger: TAGCTGGCTCGGATCCTGTGTATGTGCAAAATGCAAGCTATGATTGCAGAAATAAGCCAAGCCATCATGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | TACTGCATGAATTCATTTGGTCAAAGACACAGTAGCTaGCTAGTAAAGGTGAATGCCAAACGCGTAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YCMNSFGQRHSS*LVKVNAKRVGE Trigger: TTCCCCTACGCGTTTGGCATTCACCTTTACTAGCAAGCTACTGTGTCTTTGACCAAATGAATTCATGCAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | AGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGCCGGCTCTTAACGCCAGTTTTCCCAGATaGAGATCCTTAATTGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKELYDYLIPKGMPALNASFPR*RSLIGL Trigger: AAGTCCAATTAAGGATCTGCATCTGGGAAAACTGGC...GTTAAGAGCCGGCATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | ATAGATCTTACTGCTTGTTGTGTGTCAGTGGTTTTCTaGATCCACAGGAGTAAAACCAGATGCAATGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IDLTACCVSVVF*IHRSKTRCNVP Trigger: TGGCACATTGCATCTGGTTTTACTCCTGTGGATCAAGAAAACCACTGACACACAACAAGCAGTAAGATCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | TATAAAGAGCAGCATGGTTCTGCATCTGCTGACACCTaGAGACATTTATTAAATGTGCCTCTTACAGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YKEQHGSASADT*RHLLNVPLTGR Trigger: TCTCCCTGTAAGAGGCACATTTAATAAATGTCTCAAGGTGTCAGCAGATGCAGAACCATGCTGCTCTTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | ACAGGATCTTTTCGCTATTTGCATTTTTACTACCTACTTCCAACTTTACTAGGAGGTTGGGAGGGAGCCTaGCATTTAAGTGATGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TGSFRYLHFYYLLPTLLGGWEGA*HLSDAE Trigger: TTCAGCATCACTTAAATGGCAGGCTCCCTCCCAACC...TCCTAGTAAAGTTGGAAGTAGGTAGTAAAAATGCAAATAGCGAAAAGATCCTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGAGAAAGGCATGTTCTTAGAATAAGGCAAAGGGTCACTTGGGACAACACCAAAAGGAGCTTGTTGTaGACATATGGTAATAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGERHVLRIRQRVTWDNTKRSLL*TYGNKN Trigger: GTTCTTATTACCATATGTCCACAACAAGCTCCTTTT...GGTGTTGTCCCAAGTGACCCTTTGCCTTATTCTAAGAACATGCCTTTCTCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CCA 90 bp | AAGACTCTATTTAGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGAGGCATTGTAGTTGCTaGGATATCTCCCTGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KTLFSRKELYDYLIPKGMRHCSC*DISLLL Trigger: AAGCAGCAGGGAGATATCCCAGCAACTACAATGCCT...CATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACTAAATAGAGTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000237333.2 |
||
| CDS-3UTR GCA 90 bp | ACACATCATGTAATGGTTTTTCCTATAGAGGTTCATGTAGAACCTGAGGTATTTCAGCCATTTCCTGTATaGATTGGCATACCTGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: THHVMVFPIEVHVEPEVFQPFPV*IGIPDL Trigger: CAAGTCAGGTATGCCAATGCATACAGGAAATGGCTG...AAATACCTCAGGTTCTACATGAACCTCTATAGGAAAAACCATTACATGATGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | CACTCAACACAATGTAGAGTTATTTTAAAGAAGACATaGGATGACAGTATGTGGAATTCTTGGGGTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HSTQCRVILKKT*DDSMWNSWGRF Trigger: AAAACGACCCCAAGAATTCCACATACTGTCATCCAATGTCTTCTTTAAAATAACTCTACATTGTGTTGAGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| 3UTR CAA 72 bp | ACAAGAGTTCAGTATAAGATAACCTTGTACCACACATaGAAGTTAGAAAGGCACTCAACACAATGTAGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRVQYKITLYHT*KLERHSTQCRV Trigger: AACTCTACATTGTGTTGAGTGCCTTTCTAACTTCAATGTGTGGTACAAGGTTATCTTATACTGAACTCTTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | CGTCCTCCCATCCACCCGTGTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCGTGGTGAAGTCTGGGTaGAGAAGCAGCAGGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPPIHPCSHCVLRTAVSAVVKSG*RSSRVQ Trigger: CTGCACCCTGCTGCTTCTCAACCCAGACTTCACCAC...GGCGCTGACTGCAGTTCTGAGAACACAATGGCTACACGGGTGGATGGGAGGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | GTGCCGCCTTCAGATCCAGCTTGGCCACGTTCTGTAAAACCCAGATaGGATGGGACCAGGCATTGTAGTTGCTGGGATATCTCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VPPSDPAWPRSVKPR*DGTRHCSCWDISLL Trigger: CAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGAACGTGGCCAAGCTGGATCTGAAGGCGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 |
||
| CDS GCA 90 bp | CCAGATGCGATGGGACCAGGCATTGTAGTTGCTGGGATATCTCCCTaGTGCTTCAATGTGCGGGTTCCTTCGGAAGGCGTTGGTGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: PDAMGPGIVVAGISP*CFNVRVPSEGVGDV Trigger: GACATCACCAACGCCTTCCGAAGGAACCCGCACATTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236951.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGCACACTTGGCTCCTCTGTaGAGGCTGCCGCTGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLSAVHCVPASLQAHLAPL*RLPLLH Trigger: ATGAAGCAGCGGCAGCCTCAACAGAGGAGCCAAGTG...TGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGACAAATGAGAAGCCCAAGGATGGACCTAGAGAGCCATGGGTCAAAGAGGCACCTAAGCTTCCTTaGGCCACAGAGGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QETNEKPKDGPREPWVKEAPKLP*ATEEGR Trigger: CCTGCCCTCCTCTGTGGCCAAAGGAAGCTTAGGTGC...CTCTTTGACCCATGGCTCTCTAGGTCCATCCTTGGGCTTCTCATTTGTCTCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | CCACGTTCTGTAAAACCCAGATGCGATGGGACCAGGCATTGTAGTTaGTGGGATATCTCCCTGCTGCTTCAATGTGCGGGTTCCTTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: PRSVKPRCDGTRHCS*WDISLLLQCAGSFG Trigger: TCCGAAGGAACCCGCACATTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGAACGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236951.2 |
||
| CDS CCA 90 bp | CGTTCTGTAAAACCCAGATGCGATGGGACCAGGCATTGTAGTTGCTaGGATATCTCCCTGCTGCTTCAATGTGCGGGTTCCTTCGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSVKPRCDGTRHCSC*DISLLLQCAGSFGR Trigger: CCTTCCGAAGGAACCCGCACATTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236951.2 |
||
| CDS CCA 90 bp | AGAGAGGATGAGCTCTTTCCTGACATTCCATGCAGTGGTGAAGTCTaGGTTGAGAAGCAGCAGGGTGCAGGTGACGTCAGCCAGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: REDELFPDIPCSGEV*VEKQQGAGDVSQFI Trigger: GATGAACTGGCTGACGTCACCTGCACCCTGCTGCTTCTCAACCCAGACTTCACCACTGCATGGAATGTCAGGAAAGAGCTCATCCTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS CCA 90 bp | TTATCCGCTGTGTCCTCTCTGCAGGAACTGCACCTAAGCTTCCTTTaGCCACAGAGGAGGGCAGGAACGTTTCCTGACTTAACTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSAVSSLQELHLSFL*PQRRAGTFPDLTAA Trigger: TGCAGCAGTTAAGTCAGGAAACGTTCCTGCCCTCCTCTGTGGCCAAAGGAAGCTTAGGTGCAGTTCCTGCAGAGAGGACACAGCGGATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | GTAGCCATTGTGTTCTCAGAACTGCAGTCAGCGCCAAGTGCTTCTGCGGGTGGATTCCTGGGAATAGCCTaGCTTGCTAGAGTCACTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VAIVFSELQSAPSASAGGFLGIA*LARVTQ Trigger: CTGAGTGACTCTAGCAAGCAAGGCTATTCCCAGGAA...TCCACCCGCAGAAGCACTTGGCGCTGACTGCAGTTCTGAGAACACAATGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | GAAGGATCTTCAGATCCAGCTTGGCCACGTTCTGTAAAACCCAGATaGGATGGGACCAGGCATTGTAGTTGCTGGGATATCTCCCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EGSSDPAWPRSVKPR*DGTRHCSCWDISLL Trigger: CAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGAACGTGGCCAAGCTGGATCTGAAGATCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | GGGACCAGGCATTGTAGTTGCTGGGATATCTCCCTGCTGCTTCACTaGAGACTTCCATCTCTTCCTGTATTATCCGCTGTGTCCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTRHCSCWDISLLLH*RLPSLPVLSAVSSL Trigger: CAGAGAGGACACAGCGGATAATACAGGAAGAGATGGAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS CCA 90 bp | CTCAACCAGGACAATGGGACTCCGGTTATATCTTGCTTCAGGGCATaGGATCAGGCCAATTTCATCTATGTGCGGGTTCCTTCGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LNQDNGTPVISCFRA*DQANFIYVRVPSEG Trigger: GCCTTCCGAAGGAACCCGCACATAGATGAAATTGGCCTGATCCCATGCCCTGAAGCAAGATATAACCGGAGTCCCATTGTCCTGGTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | GATGCGATGGGACCAGGCATTGTAGTTGCTGGGATATCTCCCTGCTaGTTCACTGCAGACTTCCATCTCTTCCTGTATTATCCGCTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: DAMGPGIVVAGISPC*FTADFHLFLYYPLC Trigger: ACACAGCGGATAATACAGGAAGAGATGGAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | TTACACATGGGAGCTCTCCTTAAGAACAGCAGAGCTAGCCCACATCACTCACTTGTCCGTCCACTTCCATaGCCTGAGATAGTTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LHMGALLKNSRASPHHSLVRPLP*PEIVEG Trigger: GCCCTCAACTATCTCAGGCAATGGAAGTGGACGGAC...AAGTGAGTGATGTGGGCTAGCTCTGCTGTTCTTAAGGAGAGCTCCCATGTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS CCA 90 bp | GAATCAATAAGATCTGTGCAGAATTCCACCTCTTCTTCTAGGAGCTaGGGAAGATTCACACTTGGCTCCTCTGTTGAGGCTGCCGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESIRSVQNSTSSSRS*GRFTLGSSVEAAAA Trigger: AGCAGCGGCAGCCTCAACAGAGGAGCCAAGTGTGAATCTTCCCCAGCTCCTAGAAGAAGAGGTGGAATTCTGCACAGATCTTATTGATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | GAGGCTGCCGCTGCTTCATCTTTTGGCTCACTTTTCAAAGAGTTGTaGTGCGGTACAGCACTGTCTATCGTAGTCTGGCTAATCAATGAC | + |
|
Preference number: 5 (lower is better) Translates to: EAAAASSFGSLFKEL*CGTALSIVVWLIND Trigger: GTCATTGATTAGCCAGACTACGATAGACAGTGCTGTACCGCAGCACAACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGCGGCAGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATAGGGGGAGCAAAGACATaGCTTGTGTTTGCAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLSLGSALCACFSSSIGGAKT*LVFAVS Trigger: TGAAACTGCAAACACAAGCAATGTCTTTGCTCCCCC...TATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAGAGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067077.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAGAGACAAATGAGAAGCCCAAGGATGGACCTAGAGAGCCATGGGTCAAAGATTGGCATACCTGACTaGCTCTACGTTCCGACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LKRQMRSPRMDLESHGSKIGIPD*LYVPTS Trigger: ACTTGTCGGAACGTAGAGCAAGTCAGGTATGCCAAT...CTTTGACCCATGGCTCTCTAGGTCCATCCTTGGGCTTCTCATTTGTCTCTTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | ACCAAGTTTGTTCTCAACCAGGACAATGGGACTCCGGTTATATCTTaGTTCAGGGCATGGGATCAGGCCAATTTCATCTATGTGCGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: TKFVLNQDNGTPVIS*FRAWDQANFIYVRV Trigger: AACCCGCACATAGATGAAATTGGCCTGATCCCATGCCCTGAAGCAAGATATAACCGGAGTCCCATTGTCCTGGTTGAGAACAAACTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | GCTGCCGCTGCTTCATCTTTTGGCTCACTTTTCAAAGAGTTGTGCTaGGGTACAGCACTGTCTATCGTAGTCTGGCTAATCAATGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: AAAASSFGSLFKELC*GTALSIVVWLINDF Trigger: AAAGTCATTGATTAGCCAGACTACGATAGACAGTGCTGTACCGCAGCACAACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGCGGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
||
| CDS GCA 90 bp | AGCAGGGTGCAGGTGACGTCAGCCAGTTCATCTTTGTTTAGCCATTaGTTTCTCGTTCTGTACAAAAGGAGCTTGTTGTGGACATATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRVQVTSASSSLFSH*FLVLYKRSLLWTYG Trigger: ACCATATGTCCACAACAAGCTCCTTTTGTACAGAACGAGAAAGCAATGGCTAAACAAAGATGAACTGGCTGACGTCACCTGCACCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS CCA 90 bp | AAGGTAGAAAACGTGCCGCCTGTGACACCAAAGGGTTTCATGTCCTaGATAGGAATCAATAAGATCTGTGCAGAATTCCACCTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KVENVPPVTPKGFMS*IGINKICAEFHLFF Trigger: GAAGAAGAGGTGGAATTCTGCACAGATCTTATTGATTCCTATCCAGGACATGAAACCCTTTGGTGTCACAGGCGGCACGTTTTCTACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCTCTCTCTCGGCAGTGCATTGTGTGCCTGCTTCTCTTCAAGCATAGGCTAGAGCAAAGACATTGCTaGTGTTTGCAGTTTCATTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSLSRQCIVCLLLFKHRLEQRHC*CLQFHL Trigger: TAAATGAAACTGCAAACACAAGCAATGTCTTTGCTC...TAGCCTATGCTTGAAGAGAAGCAGGCACACAATGCACTGCCGAGAGAGAGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067077.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCCTTGGGAAGCAAAACAGCTGTCAGTTTGCAAAACACAGATATTCTCGACTCCGGTTATATCTaGCTTCAGGGCATGGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: KAALGSKTAVSLQNTDILDSGYI*LQGMGS Trigger: TGATCCCATGCCCTGAAGCAAGATATAACCGGAGTC...GAGAATATCTGTGTTTTGCAAACTGACAGCTGTTTTGCTTCCCAAGGCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | CTCAAGAGACAAATGAGAAGCCCAAGGATGGACCTAGAGAGCCATGGGTCAAAGCTGTACAAAAGGAGCTaGTTGTGGACATATGGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LKRQMRSPRMDLESHGSKLYKRS*LWTYGN Trigger: ATTACCATATGTCCACAACAAGCTCCTTTTGTACAG...CTTTGACCCATGGCTCTCTAGGTCCATCCTTGGGCTTCTCATTTGTCTCTTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | CTACTAGAAAATTGTAATACCTTTGGGGCTCACATTACATTTCCATTGAACACCTTCCTTCGGAAGGCGTaGGTGATGTCCTTCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LLENCNTFGAHITFPLNTFLRKA*VMSFTT Trigger: GGTGGTGAAGGACATCACCAACGCCTTCCGAAGGAA...GGTGTTCAATGGAAATGTAATGTGAGCCCCAAAGGTATTACAATTTTCTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCAACCTAACTGCCTTTTCTTTTTAAACCACCAGCCTCTAGTTGTTTCGCCGCTGCTTCATCTTTaGGCTCACTTTTCAAAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AEQPNCLFFLNHQPLVVSPLLHL*AHFSKS Trigger: ACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGCGG...CGAAACAACTAGAGGCTGGTGGTTTAAAAAGAAAAGGCAGTTAGGTTGCTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGCCTTGGGAAGCAAAACAGCTGTCAGTTTGCAAAACACAGATATTCTCCTCTCCACACCAAGTTaGTTCTCAACCAGGACAATG | + |
|
Preference number: 5 (lower is better) Translates to: KAALGSKTAVSLQNTDILLSTPS*FSTRTM Trigger: CATTGTCCTGGTTGAGAACAAACTTGGTGTGGAGAG...GAGAATATCTGTGTTTTGCAAACTGACAGCTGTTTTGCTTCCCAAGGCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | GCAGAGCAACCTAACTGCCTTTTCTTTTTAAACCACCAGCCTCTAGTTGTTTCGCATTTCCTGTATGCATaGGCATACCTGACTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AEQPNCLFFLNHQPLVVSHFLYA*AYLTCS Trigger: AGAGCAAGTCAGGTATGCCAATGCATACAGGAAATG...CGAAACAACTAGAGGCTGGTGGTTTAAAAAGAAAAGGCAGTTAGGTTGCTCTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGCCGGCTCTTAACTCAGCCAGTTCATCTTaGTTTAGCCATTGCTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRKELYDYLIPKGMPALNSASSS*FSHCFL Trigger: GAGAAAGCAATGGCTAAACAAAGATGAACTGGCTGA...GTTAAGAGCCGGCATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | AAGACTCTATTTAGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGACAAGTGGACAATACTaGATCAATAAACCTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KTLFSRKELYDYLIPKGMTSGQY*INKPVL Trigger: GAGCACAGGTTTATTGATCAAGTATTGTCCACTTGT...CATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACTAAATAGAGTCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS-3UTR CAA 90 bp | AAGACTCTATTTAGTAGGAAGGAACTATACGATTATCTCATACCCAAAGGAATGTACAAAAGGAGCTTGTaGTGGACATATGGTAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KTLFSRKELYDYLIPKGMYKRSL*WTYGNK Trigger: CTTATTACCATATGTCCACAACAAGCTCCTTTTGTA...CATTCCTTTGGGTATGAGATAATCGTATAGTTCCTTCCTACTAAATAGAGTCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 72 bp | CTTCGGAAGGCGTTGGTGATGTCCTTCACCACCCTCTaGACCAGCACCGCCACCTCCTCGTTCGACTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRKALVMSFTTL*TSTATSSFDSA Trigger: GGCCGAGTCGAACGAGGAGGTGGCGGTGCTGGTGCAGAGGGTGGTGAAGGACATCACCAACGCCTTCCGAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS TCA 72 bp | CTGCTTCAATGTGCGGGTTCCTTCGGAAGGCGTTGGTaGTGTCCTTCACCACCCTCTGCACCAGCACCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLQCAGSFGRRW*CPSPPSAPAPP Trigger: TGGCGGTGCTGGTGCAGAGGGTGGTGAAGGACATCACCAACGCCTTCCGAAGGAACCCGCACATTGAAGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236951.2 |
||
| CDS TCA 72 bp | TTTCATCTATGTGCGGGTTCCTTCGGAAGGCGTTGGTaGTGTCCTTCACCACCCTCTGCACCAGCACCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: FHLCAGSFGRRW*CPSPPSAPAPP Trigger: TGGCGGTGCTGGTGCAGAGGGTGGTGAAGGACATCACCAACGCCTTCCGAAGGAACCCGCACATAGATGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 72 bp | GGACCAGGCATTGTAGTTGCTGGGATATCTCCCTGCTaGTTCAATGTGCGGGTTCCTTCGGAAGGCGTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPGIVVAGISPC*FNVRVPSEGVG Trigger: ACCAACGCCTTCCGAAGGAACCCGCACATTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236951.2 |
||
| CDS CCA 72 bp | AAACCCAGATGCGATGGGACCAGGCATTGTAGTTGCTaGGATATCTCCCTGCTGCTTCAATGTGCGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KPRCDGTRHCSC*DISLLLQCAGS Trigger: GGAACCCGCACATTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000236951.2 |
||
| CDS CCA 72 bp | GTGTCCTCTCTGCAGGAACTGCACCTAAGCTTCCTTTaGCCACAGAGGAGGGCAGGAACGTTTCCTGACTTA | + |
|
Preference number: 6 (lower is better) Translates to: VSSLQELHLSFL*PQRRAGTFPDL Trigger: TAAGTCAGGAAACGTTCCTGCCCTCCTCTGTGGCCAAAGGAAGCTTAGGTGCAGTTCCTGCAGAGAGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS CAA 72 bp | CGTCCACTTCCATTGCCTGAGATAGTTGAGGGCTTGTaGGAATCTGGAGCGAGTCATTCAAAGCGCCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPLPLPEIVEGL*ESGASHSKRPQ Trigger: CTGGGGGCGCTTTGAATGACTCGCTCCAGATTCCAACAAGCCCTCAACTATCTCAGGCAATGGAAGTGGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS CAA 72 bp | GTCCGTCCACTTCCATTGCCTGAGATAGTTGAGGGCTaGTTGGAATCTGGAGCGAGTCATTCAAAGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRPLPLPEIVEG*LESGASHSKRP Trigger: GGGGCGCTTTGAATGACTCGCTCCAGATTCCAACAAGCCCTCAACTATCTCAGGCAATGGAAGTGGACGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
||
| CDS GCA 72 bp | GTAAAACCCAGATGCGATGGGACCAGGCATTGTAGTTaGTGGGATATCTCCCTGCTGCTTCAATGTGCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: VKPRCDGTRHCS*WDISLLLQCAG Trigger: ACCCGCACATTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000236951.2 |
||
| CDS CCA 72 bp | AAACCCAGATGCGATGGGACCAGGCATTGTAGTTGCTaGGATATCTCCCTGCTGCTTCACTGCAGACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: KPRCDGTRHCSC*DISLLLHCRLP Trigger: TGGAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 ENSMUST00000237333.2 |
||
| CDS CAA 72 bp | CTAGGAGCTGGGGAAGATTCACACTTGGCTCCTCTGTaGAGGCTGCCGCTGCTTCATCTTTTGGCTCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGAGEDSHLAPL*RLPLLHLLAHF Trigger: AAAGTGAGCCAAAAGATGAAGCAGCGGCAGCCTCAACAGAGGAGCCAAGTGTGAATCTTCCCCAGCTCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
||
| CDS CAA 90 bp | TGCAGAATTCCACCTCTTCTTCTAGGAGCTGGGGAAGATTCACACTaGGCTCCTCTGTTGAGGCTGCCGCTGCTTCATCTTTTGGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: CRIPPLLLGAGEDSH*APLLRLPLLHLLAH Trigger: GTGAGCCAAAAGATGAAGCAGCGGCAGCCTCAACAGAGGAGCCAAGTGTGAATCTTCCCCAGCTCCTAGAAGAAGAGGTGGAATTCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
||
| CDS GCA 72 bp | GTAAAACCCAGATGCGATGGGACCAGGCATTGTAGTTaGTGGGATATCTCCCTGCTGCTTCACTGCAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: VKPRCDGTRHCS*WDISLLLHCRL Trigger: AAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 ENSMUST00000237333.2 |
||
| CDS GCA 72 bp | TCAGATCCAGCTTGGCCACGTTCTGTAAAACCCAGATaGGATGGGACCAGGCATTGTAGTTGCTGGGATATC | + |
|
Preference number: 6 (lower is better) Translates to: SDPAWPRSVKPR*DGTRHCSCWDI Trigger: GATATCCCAGCAACTACAATGCCTGGTCCCATCGCATCTGGGTTTTACAGAACGTGGCCAAGCTGGATCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000099560.5 ENSMUST00000235740.2 ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS CAA 72 bp | TTGGCTCCTCTGTTGAGGCTGCCGCTGCTTCATCTTTaGGCTCACTTTTCAAAGAGTTGTGCTGCGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LAPLLRLPLLHL*AHFSKSCAAVQ Trigger: CTGTACCGCAGCACAACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGCGGCAGCCTCAACAGAGGAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS CCA 72 bp | AGATCTGTGCAGAATTCCACCTCTTCTTCTAGGAGCTaGGGAAGATTCACACTTGGCTCCTCTGTTGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: RSVQNSTSSSRS*GRFTLGSSVEA Trigger: AGCCTCAACAGAGGAGCCAAGTGTGAATCTTCCCCAGCTCCTAGAAGAAGAGGTGGAATTCTGCACAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS CCA 72 bp | AGCTCTCCACACCAAGTTTGTTCTCAACCAGGACAATaGGACTCCGGTTATATCTTGCTTCAGGGCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: SSPHQVCSQPGQ*DSGYILLQGMG Trigger: TCCCATGCCCTGAAGCAAGATATAACCGGAGTCCCATTGTCCTGGTTGAGAACAAACTTGGTGTGGAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CAA 72 bp | GCCGCTGCTTCATCTTTTGGCTCACTTTTCAAAGAGTaGTGCTGCGGTACAGCACTGTCTATCGTAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: AAASSFGSLFKE*CCGTALSIVVW Trigger: CCAGACTACGATAGACAGTGCTGTACCGCAGCACAACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS CAA 90 bp | CACCAAGTTTGTTCTCAACCAGGACAATGGGACTCCGGTTATATCTaGCTTCAGGGCATGGGATCAGGCCAATTTCATCTATGTGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: HQVCSQPGQWDSGYI*LQGMGSGQFHLCAG Trigger: ACCCGCACATAGATGAAATTGGCCTGATCCCATGCCCTGAAGCAAGATATAACCGGAGTCCCATTGTCCTGGTTGAGAACAAACTTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS GCA 72 bp | CATTGTAGTTGCTGGGATATCTCCCTGCTGCTTCACTaGAGACTTCCATCTCTTCCTGTATTATCCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: HCSCWDISLLLH*RLPSLPVLSAV Trigger: CACAGCGGATAATACAGGAAGAGATGGAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGCAACTACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS GCA 72 bp | GGACCAGGCATTGTAGTTGCTGGGATATCTCCCTGCTaGTTCACTGCAGACTTCCATCTCTTCCTGTATTAT | + |
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Preference number: 6 (lower is better) Translates to: GPGIVVAGISPC*FTADFHLFLYY Trigger: ATAATACAGGAAGAGATGGAAGTCTGCAGTGAAGCAGCAGGGAGATATCCCAGCAACTACAATGCCTGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CCA 72 bp | AAGACAGTTCATCAAGAAGGATCTTCAGATCCAGCTTaGCCACGTTCTGTAAAACCCAGATGCGATGGGACC | + |
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Preference number: 6 (lower is better) Translates to: KTVHQEGSSDPA*PRSVKPRCDGT Trigger: GGTCCCATCGCATCTGGGTTTTACAGAACGTGGCCAAGCTGGATCTGAAGATCCTTCTTGATGAACTGTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS CAA 90 bp | GTTGAGGCTGCCGCTGCTTCATCTTTTGGCTCACTTTTCAAAGAGTaGTGCTGCGGTACAGCACTGTCTATCGTAGTCTGGCTAATCAAT | + |
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Preference number: 6 (lower is better) Translates to: VEAAAASSFGSLFKE*CCGTALSIVVWLIN Trigger: ATTGATTAGCCAGACTACGATAGACAGTGCTGTACCGCAGCACAACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGCGGCAGCCTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS GCA 72 bp | GCTGCTTCATCTTTTGGCTCACTTTTCAAAGAGTTGTaGTGCGGTACAGCACTGTCTATCGTAGTCTGGCTA | + |
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Preference number: 6 (lower is better) Translates to: AASSFGSLFKEL*CGTALSIVVWL Trigger: TAGCCAGACTACGATAGACAGTGCTGTACCGCAGCACAACTCTTTGAAAAGTGAGCCAAAAGATGAAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS GCA 72 bp | GTTCTCAACCAGGACAATGGGACTCCGGTTATATCTTaGTTCAGGGCATGGGATCAGGCCAATTTCATCTAT | + |
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Preference number: 6 (lower is better) Translates to: VLNQDNGTPVIS*FRAWDQANFIY Trigger: ATAGATGAAATTGGCCTGATCCCATGCCCTGAAGCAAGATATAACCGGAGTCCCATTGTCCTGGTTGAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CAA 72 bp | TGTTCTCAACCAGGACAATGGGACTCCGGTTATATCTaGCTTCAGGGCATGGGATCAGGCCAATTTCATCTA | + |
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Preference number: 6 (lower is better) Translates to: CSQPGQWDSGYI*LQGMGSGQFHL Trigger: TAGATGAAATTGGCCTGATCCCATGCCCTGAAGCAAGATATAACCGGAGTCCCATTGTCCTGGTTGAGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS GCA 72 bp | GCTTCATCTTTTGGCTCACTTTTCAAAGAGTTGTGCTaGGGTACAGCACTGTCTATCGTAGTCTGGCTAATC | + |
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Preference number: 6 (lower is better) Translates to: ASSFGSLFKELC*GTALSIVVWLI Trigger: GATTAGCCAGACTACGATAGACAGTGCTGTACCGCAGCACAACTCTTTGAAAAGTGAGCCAAAAGATGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000236951.2 ENSMUST00000237333.2 |
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| CDS CAA 90 bp | GTTCTGTACAAAAGGAGCTTGTTGTGGACATATGGTAATAAGAACTaGACACACCAGCTCTCCACACCAAGTTTGTTCTCAACCAGGACA | + |
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Preference number: 6 (lower is better) Translates to: VLYKRSLLWTYGNKN*THQLSTPSLFSTRT Trigger: TGTCCTGGTTGAGAACAAACTTGGTGTGGAGAGCTGGTGTGTCAAGTTCTTATTACCATATGTCCACAACAAGCTCCTTTTGTACAGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CCA 72 bp | CATTGCTTTCTCGTTCTGTACAAAAGGAGCTTGTTGTaGACATATGGTAATAAGAACTTGACACACCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: HCFLVLYKRSLL*TYGNKNLTHQL Trigger: GAGCTGGTGTGTCAAGTTCTTATTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACGAGAAAGCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CAA 72 bp | AAAAGGAGCTTGTTGTGGACATATGGTAATAAGAACTaGACACACCAGCTCTCCACACCAAGTTTGTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: KRSLLWTYGNKN*THQLSTPSLFS Trigger: TGAGAACAAACTTGGTGTGGAGAGCTGGTGTGTCAAGTTCTTATTACCATATGTCCACAACAAGCTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CAA 72 bp | AGCCATTGCTTTCTCGTTCTGTACAAAAGGAGCTTGTaGTGGACATATGGTAATAAGAACTTGACACACCAG | + |
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Preference number: 6 (lower is better) Translates to: SHCFLVLYKRSL*WTYGNKNLTHQ Trigger: CTGGTGTGTCAAGTTCTTATTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACGAGAAAGCAATGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CAA 90 bp | TCATCTTTGTTTAGCCATTGCTTTCTCGTTCTGTACAAAAGGAGCTaGTTGTGGACATATGGTAATAAGAACTTGACACACCAGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: SSLFSHCFLVLYKRS*LWTYGNKNLTHQLS Trigger: GGAGAGCTGGTGTGTCAAGTTCTTATTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACGAGAAAGCAATGGCTAAACAAAGATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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| CDS CAA 72 bp | TTTAGCCATTGCTTTCTCGTTCTGTACAAAAGGAGCTaGTTGTGGACATATGGTAATAAGAACTTGACACAC | + |
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Preference number: 6 (lower is better) Translates to: FSHCFLVLYKRS*LWTYGNKNLTH Trigger: GTGTGTCAAGTTCTTATTACCATATGTCCACAACAAGCTCCTTTTGTACAGAACGAGAAAGCAATGGCTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237333.2 |
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