Pregenerated sensors for PTAFR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056529Ensembl transcript IDs: ENSMUST00000070690.8
Found 95 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCTCGATAAGAAGCTGCCTGCCGGAAGTGGAAAGTGCAGTGCCCTaGGGTAGCCATCTCTCTTCCATTCCTTCAGCACTCATTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: TSIRSCLPEVESAVP*GSHLSSIPSALIQA Trigger: GGCCTGAATGAGTGCTGAAGGAATGGAAGAGAGATGGCTACCTCAGGGCACTGCACTTTCCACTTCCGGCAGGCAGCTTCTTATCGAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 90 bp | AGGAATCCTGACAAGAGAACCTCCCAGGACTCAGGAGAAAGCACTTaGTCCCTCTGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RNPDKRTSQDSGEST*SLWPLGSCVFSPSS Trigger: AGAACTTGGCGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTCCTGAGTCCTGGGAGGTTCTCTTGTCAGGATTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 90 bp | CTACCGTGCCTTCCTTGCCATGAGGGACCGAGGTCTTCTAAACTGTaGGCCAAAATAAATCTCTCCCTCCTTGAGTTGTTTCTGACAGGG | + |
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Preference number: 1 (lower is better) Translates to: LPCLPCHEGPRSSKL*AKINLSLLELFLTG Trigger: CCCTGTCAGAAACAACTCAAGGAGGGAGAGATTTATTTTGGCTCACAGTTTAGAAGACCTCGGTCCCTCATGGCAAGGAAGGCACGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR GCA 90 bp | ATCCAAGCAGATTCCTGCCCTATTGGAACAAGCCTATGCCTGTCTTaGAGACAGGCATCAACTGACCCAACTTCAAGGAGACACTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: IQADSCPIGTSLCLS*RQASTDPTSRRHLL Trigger: CAGCAAGTGTCTCCTTGAAGTTGGGTCAGTTGATGCCTGTCTGCAAGACAGGCATAGGCTTGTTCCAATAGGGCAGGAATCTGCTTGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 90 bp | CTGTCTGTTCTCTCTTTGTACCATGTGGCTCCTGGGATTAAACACTaGTCAGCAGTGTTAGCTGCAAGTGCTCGCTACCTTGCACTACCA | + |
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Preference number: 1 (lower is better) Translates to: LSVLSLYHVAPGIKH*SAVLAASARYLALP Trigger: TGGTAGTGCAAGGTAGCGAGCACTTGCAGCTAACACTGCTGATCAGTGTTTAATCCCAGGAGCCACATGGTACAAAGAGAGAACAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 90 bp | CCCTATTGGAACAAGCCTATGCCTGTCTTGCAGACAGGCATCAACTaGCCCAACTTCAAGGAGACACTTGCTGGAAGGAAGGACTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: PYWNKPMPVLQTGIN*PNFKETLAGRKDFV Trigger: AACAAAGTCCTTCCTTCCAGCAAGTGTCTCCTTGAAGTTGGGTCAGTTGATGCCTGTCTGCAAGACAGGCATAGGCTTGTTCCAATAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR GCA 90 bp | CAAATCCAGATGTCCAACCCTGGCCCCTCTTCAGTTCCTATCAAAGGGCCGAGGCAGCAACCGGCTCTCTaGGAGGAAGTAACTGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: QIQMSNPGPSSVPIKGPRQQPAL*EEVTAA Trigger: TGCGGCAGTTACTTCCTCGCAGAGAGCCGGTTGCTG...CCTCGGCCCTTTGATAGGAACTGAAGAGGGGCCAGGGTTGGACATCTGGATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | CCTATCAAAGGGCCGAGGGAGGGGAGGTTCGGGATTAGTCACCCAGATTTCAGCGCACTCATTCAGGCCTaGGCAAAACTCAGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: PIKGPREGRFGISHPDFSALIQA*AKLSCL Trigger: GAGGCAGCTGAGTTTTGCCCAGGCCTGAATGAGTGC...GCTGAAATCTGGGTGACTAATCCCGAACCTCCCCTCCCTCGGCCCTTTGATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGAGTCTACAGCTTCTGGGTACTTCTCAGAGGGCAAGAGGGCATCTCATGGCTGCCTGCCGGAAGTaGAAAGTGCAGTGCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: VLSLQLLGTSQRARGHLMAACRK*KVQCPE Trigger: CTCAGGGCACTGCACTTTCCACTTCCGGCAGGCAGC...CATGAGATGCCCTCTTGCCCTCTGAGAAGTACCCAGAAGCTGTAGACTCAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CAA 90 bp | GAACCTCCCAGGACTCAGGAGAAAGCACTTGGTCCCTCTGGCCCCTaGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: EPPRTQEKALGPSGP*EAVSSRQVLVSLQP Trigger: AGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTCCTGAGTCCTGGGAGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR GCA 90 bp | CCTATCAAAGGGCCGAGGGAGGGGAGGTTCGGGATTAGTCACCCAGATTTCAGCAAGTGGAAAGTGCAGTaGCCTGAGGTAGCCATCTCT | + |
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Preference number: 2 (lower is better) Translates to: PIKGPREGRFGISHPDFSKWKVQ*PEVAIS Trigger: AGAGATGGCTACCTCAGGGCACTGCACTTTCCACTT...GCTGAAATCTGGGTGACTAATCCCGAACCTCCCCTCCCTCGGCCCTTTGATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATCCAGATGTCCAACCCTGGCCCCTCTTCAGTTCCTATCAAAGGGCCGAGGTTAAGGTGCAGTCTTTaGTTCCTGGCCCACTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QIQMSNPGPSSVPIKGPRLRCSL*FLAHCH Trigger: GTGACAGTGGGCCAGGAACCAAAGACTGCACCTTAA...CCTCGGCCCTTTGATAGGAACTGAAGAGGGGCCAGGGTTGGACATCTGGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | CAAATCCAGATGTCCAACCCTGGCCCCTCTTCAGTTCCTATCAAAGGGCCGAGGGTAGAAGTTGGTGGCTaGGGGTGGGTTTTATCGCAT | + |
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Preference number: 2 (lower is better) Translates to: QIQMSNPGPSSVPIKGPRVEVGG*GWVLSH Trigger: ATGCGATAAAACCCACCCCCAGCCACCAACTTCTAC...CCTCGGCCCTTTGATAGGAACTGAAGAGGGGCCAGGGTTGGACATCTGGATTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGAGTCTACAGCTTCTGGGTACTTCTCAGAGGGCAAGAGGGCATCTCATGGGCTGTAGAAGTTGGTaGCTGGGGGTGGGTTTTATC | + |
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Preference number: 2 (lower is better) Translates to: VLSLQLLGTSQRARGHLMGCRSW*LGVGFI Trigger: GATAAAACCCACCCCCAGCCACCAACTTCTACAGCC...CATGAGATGCCCTCTTGCCCTCTGAGAAGTACCCAGAAGCTGTAGACTCAGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR TCA 90 bp | TACCGTGCCTTCCTTGCCATGAGGGACCGAGGTCTTCTAAACTGTGAGCCAAAAGCTGGGTACAGTGAGTaGGATGGGACTGAGACACTT | + |
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Preference number: 2 (lower is better) Translates to: YRAFLAMRDRGLLNCEPKAGYSE*DGTETL Trigger: AAGTGTCTCAGTCCCATCTCACTCACTGTACCCAGC...TTTTGGCTCACAGTTTAGAAGACCTCGGTCCCTCATGGCAAGGAAGGCACGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | TGTATATGTATATGGGGAGGCGGGGCATGTGTGTGCCATGGTATGAAAGTAAAGGCACTACCATCTCACTaGCCCCGTGCCCTGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: CICIWGGGACVCHGMKVKALPSH*PRALLS Trigger: AGAGAGCAGGGCACGGGGCCAGTGAGATGGTAGTGC...CTTTACTTTCATACCATGGCACACACATGCCCCGCCTCCCCATATACATATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CAA 90 bp | CTTGTTTCTCTCCAACCTCTGCTTAGCCTAACACATCTGCTTTCTTaGAAAAGCCACTTGTCTGCCAGTCACCTAGGTGGCCACCCAACC | + |
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Preference number: 2 (lower is better) Translates to: LVSLQPLLSLTHLLS*KSHLSASHLGGHPT Trigger: GGTTGGGTGGCCACCTAGGTGACTGGCAGACAAGTGGCTTTTCAAAGAAAGCAGATGTGTTAGGCTAAGCAGAGGTTGGAGAGAAACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGGTCACAAGGACCTTGTACCTATAGATGGACCAAGGAAGGCACCATCTGAAGATGCCCCAGTTGGATaGACTGAGCTGCTTAGCGTT | + |
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Preference number: 2 (lower is better) Translates to: KGHKDLVPIDGPRKAPSEDAPVG*TELLSV Trigger: AACGCTAAGCAGCTCAGTTCATCCAACTGGGGCATC...TTCAGATGGTGCCTTCCTTGGTCCATCTATAGGTACAAGGTCCTTGTGACCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | GAGAAAGCACTTGGTCCCTCTGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTCAAGGAGACACTTGCTaGAAGGAAGGACTTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: EKALGPSGPLEAVSSRQVQGDTC*KEGLCF Trigger: AAAACAAAGTCCTTCCTTCCAGCAAGTGTCTCCTTG...AACTTGGCGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTGCTTAGCGGCGGGGCATGTGTGTaGCATGGTATGAAAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: LEAVSSRQVLVSLQPLLSGGACV*HGMKVK Trigger: CTTTACTTTCATACCATGGCACACACATGCCCCGCC...GCTAAGCAGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTCACAAGGACCTTGTACCTATAGATGGACCAAGGAAGGCACCATCTGAACACAATCTGAAGCTCTaGGTGAGTCCATCAGCCACA | + |
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Preference number: 2 (lower is better) Translates to: KGHKDLVPIDGPRKAPSEHNLKL*VSPSAT Trigger: TGTGGCTGATGGACTCACCCAGAGCTTCAGATTGTG...TTCAGATGGTGCCTTCCTTGGTCCATCTATAGGTACAAGGTCCTTGTGACCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CCA 90 bp | TGGTTACATTTGAGGCCAGGTACTTGGGTCAGTCAAGAGATACCACCAAACCACCCTTGTACCTATAGATaGACCAAGGAAGGCACCATC | + |
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Preference number: 2 (lower is better) Translates to: WLHLRPGTWVSQEIPPNHPCTYR*TKEGTI Trigger: GATGGTGCCTTCCTTGGTCCATCTATAGGTACAAGG...GTGGTTTGGTGGTATCTCTTGACTGACCCAAGTACCTGGCCTCAAATGTAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTGCTTAGCCACATCTGCTTTCTTTaGAAAGCCACTTGTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: LEAVSSRQVLVSLQPLLSHICFL*KATCLP Trigger: TGGCAGACAAGTGGCTTTTCAAAGAAAGCAGATGTG...GCTAAGCAGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTGCTTAGCAGGTCTTCTAAACTGTaGGCCAAAATAAATCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LEAVSSRQVLVSLQPLLSRSSKL*AKINLS Trigger: GGAGAGATTTATTTTGGCTCACAGTTTAGAAGACCT...GCTAAGCAGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR TCA 90 bp | AATGTTATTTCATTGAGAGCACTAGACACCCATTCCAATGAGCTTAAGGAAGGACCTGGGATTAAACACTaGTCAGCAGTGTTAGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: NVISLRALDTHSNELKEGPGIKH*SAVLAA Trigger: TGCAGCTAACACTGCTGATCAGTGTTTAATCCCAGG...TCCTTCCTTAAGCTCATTGGAATGGGTGTCTAGTGCTCTCAATGAAATAACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTGCTTAGCCATCTGAAACTTAATTaGTTCCCCAAAAATCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LEAVSSRQVLVSLQPLLSHLKLN*FPKNLP Trigger: TGGAAGATTTTTGGGGAAGCAATTAAGTTTCAGATG...GCTAAGCAGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR GCA 72 bp | CCTGTTCCCACCACCAGAGTCGGAGCTGCCCTACCGTaGCTTCCTTGCCATGAGGGACCGAGGTCTTCTAAA | + |
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Preference number: 3 (lower is better) Translates to: PVPTTRVGAALP*LPCHEGPRSSK Trigger: TTTAGAAGACCTCGGTCCCTCATGGCAAGGAAGGCACGGTAGGGCAGCTCCGACTCTGGTGGTGGGAACAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR GCA 72 bp | CTGATCAGCAGTGTTAGCTGCAAGTGCTCGCTACCTTaGACTACCATCTCACTGGCCCCGTGCCCTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: LISSVSCKCSLP*TTISLAPCPAL Trigger: GAGAGCAGGGCACGGGGCCAGTGAGATGGTAGTGCAAGGTAGCGAGCACTTGCAGCTAACACTGCTGATCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | TACCATCTCACTGGCCCCGTGCCCTGCTCTCTGTGTTaGGAGACTATGGAACCTTCAGGAGGTAGGTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: YHLTGPVPCSLC*ETMEPSGGRSW Trigger: CCAGGACCTACCTCCTGAAGGTTCCATAGTCTCCCAACACAGAGAGCAGGGCACGGGGCCAGTGAGATGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CAA 90 bp | CCTATCAAAGGGCCGAGGGAGGGGAGGTTCGGGATTAGTCACCCAGATTTCAGCCTCTCCCTCCTTGAGTaGTTTCTGACAGGGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PIKGPREGRFGISHPDFSLSLLE*FLTGRL Trigger: CAGCCTCCCTGTCAGAAACAACTCAAGGAGGGAGAG...GCTGAAATCTGGGTGACTAATCCCGAACCTCCCCTCCCTCGGCCCTTTGATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR GCA 72 bp | GCTACCTTGCACTACCATCTCACTGGCCCCGTGCCCTaGTCTCTGTGTTGGGAGACTATGGAACCTTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: ATLHYHLTGPVP*SLCWETMEPSG Trigger: TCCTGAAGGTTCCATAGTCTCCCAACACAGAGAGCAGGGCACGGGGCCAGTGAGATGGTAGTGCAAGGTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | CCTGAGAGGTGCATCCCAAATCCAGATGTCCAACCCTaGCCCCTCTTCAGTTCCTATCAAAGGGCCGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PERCIPNPDVQP*PLFSSYQRAEG Trigger: TCCCTCGGCCCTTTGATAGGAACTGAAGAGGGGCCAGGGTTGGACATCTGGATTTGGGATGCACCTCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | ACCTCCCAGGACTCAGGAGAAAGCACTTGGTCCCTCTaGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTCT | + |
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Preference number: 3 (lower is better) Translates to: TSQDSGESTWSL*PLGSCVFSPSS Trigger: AGAACTTGGCGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTCCTGAGTCCTGGGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | GACAAGAGAACCTCCCAGGACTCAGGAGAAAGCACTTaGTCCCTCTGGCCCCTTGGAAGCTGTGTCTTCTCG | + |
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Preference number: 3 (lower is better) Translates to: DKRTSQDSGEST*SLWPLGSCVFS Trigger: CGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTCCTGAGTCCTGGGAGGTTCTCTTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CAA 90 bp | GAGAAAGCACTTGGTCCCTCTGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTCAAGTGCTCGCTACCTaGCACTACCATCTCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: EKALGPSGPLEAVSSRQVQVLAT*HYHLTG Trigger: GCCAGTGAGATGGTAGTGCAAGGTAGCGAGCACTTG...AACTTGGCGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 72 bp | AGAAGCTGCCTGCCGGAAGTGGAAAGTGCAGTGCCCTaGGGTAGCCATCTCTCTTCCATTCCTTCAGCACTC | + |
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Preference number: 3 (lower is better) Translates to: RSCLPEVESAVP*GSHLSSIPSAL Trigger: GAGTGCTGAAGGAATGGAAGAGAGATGGCTACCTCAGGGCACTGCACTTTCCACTTCCGGCAGGCAGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CAA 90 bp | TACCGTGCCTTCCTTGCCATGAGGGACCGAGGTCTTCTAAACTGTGAGCCAAAATTCCTCTGGTTACATTaGAGGCCAGGTACTTGGGTC | + |
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Preference number: 3 (lower is better) Translates to: YRAFLAMRDRGLLNCEPKFLWLH*RPGTWV Trigger: GACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAA...TTTTGGCTCACAGTTTAGAAGACCTCGGTCCCTCATGGCAAGGAAGGCACGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 72 bp | GTCAGTCCACCTCCTAGCTCCGTCTGTGAGGTCCATTaGAGAGAAGGCTCTGGATCTGGCTTTAATAAGCAG | + |
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Preference number: 3 (lower is better) Translates to: VSPPPSSVCEVH*REGSGSGFNKQ Trigger: CTGCTTATTAAAGCCAGATCCAGAGCCTTCTCTTCAATGGACCTCACAGACGGAGCTAGGAGGTGGACTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | CATCTCTCTTCCATTCCTTCAGCACTCATTCAGGCCTaGGCAAAACTCAGCTGCCTCAAGCAAACACGCTCA | + |
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Preference number: 3 (lower is better) Translates to: HLSSIPSALIQA*AKLSCLKQTRS Trigger: TGAGCGTGTTTGCTTGAGGCAGCTGAGTTTTGCCCAGGCCTGAATGAGTGCTGAAGGAATGGAAGAGAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | TGCCATGACACCAATCCAAGCAGATTCCTGCCCTATTaGAACAAGCCTATGCCTGTCTTGCAGACAGGCATC | + |
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Preference number: 3 (lower is better) Translates to: CHDTNPSRFLPY*NKPMPVLQTGI Trigger: GATGCCTGTCTGCAAGACAGGCATAGGCTTGTTCCAATAGGGCAGGAATCTGCTTGGATTGGTGTCATGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR-3UTR CAA 90 bp | TGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTACTTCAAGGAGACACTaGCTGGAAGGAAGGACTTTG | + |
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Preference number: 3 (lower is better) Translates to: WPLGSCVFSPSSCFSPTSTSRRH*LEGRTL Trigger: CAAAGTCCTTCCTTCCAGCAAGTGTCTCCTTGAAGT...AGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAAGGGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 72 bp | CTGAACATGCCTGCTCAGAAGTCCCGTGAGGTAGGTTaGACCTCCCAGCTAATGACACTACGAGGTAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: LNMPAQKSREVG*TSQLMTLRGRK Trigger: TTTTCTACCTCGTAGTGTCATTAGCTGGGAGGTTCAACCTACCTCACGGGACTTCTGAGCAGGCATGTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | TATATGTATATGGGGAGGCGGGGCATGTGTGTGCCATaGTATGAAAGTAAAGGTAGAAGGACGACTGGCCTG | + |
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Preference number: 3 (lower is better) Translates to: YMYMGRRGMCVP*YESKGRRTTGL Trigger: CAGGCCAGTCGTCCTTCTACCTTTACTTTCATACCATGGCACACACATGCCCCGCCTCCCCATATACATATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 72 bp | CTCTCTTTGTACCATGTGGCTCCTGGGATTAAACACTaGTCAGCAGTGTTAGCTGCAAGTGCTCGCTACCTT | + |
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Preference number: 3 (lower is better) Translates to: LSLYHVAPGIKH*SAVLAASARYL Trigger: AAGGTAGCGAGCACTTGCAGCTAACACTGCTGATCAGTGTTTAATCCCAGGAGCCACATGGTACAAAGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 72 bp | AAAGCACAAGGCTCAGGAAAACAGGAAAAGGTCCTCTaGGTGCTGAGTCTACAGCTTCTGGGTACTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: KAQGSGKQEKVL*VLSLQLLGTSQ Trigger: CTGAGAAGTACCCAGAAGCTGTAGACTCAGCACTCAGAGGACCTTTTCCTGTTTTCCTGAGCCTTGTGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR GCA 72 bp | CACAATACTGCCATGACACCAATCCAAGCAGATTCCTaGCCTATTGGAACAAGCCTATGCCTGTCTTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: HNTAMTPIQADS*PIGTSLCLSCR Trigger: TCTGCAAGACAGGCATAGGCTTGTTCCAATAGGGCAGGAATCTGCTTGGATTGGTGTCATGGCAGTATTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 72 bp | CTGGTCAACTTCTGTGTTTATTCCTCTGGTTACATTTaGGGCCAGGTACTTGGGTCAGTCAAGAGATACCAC | + |
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Preference number: 3 (lower is better) Translates to: LVNFCVYSSGYI*GQVLGSVKRYH Trigger: GTGGTATCTCTTGACTGACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAATAAACACAGAAGTTGACCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR TCA 72 bp | CTTCCTTGCCATGAGGGACCGAGGTCTTCTAAACTGTaGGCCAAAATAAATCTCTCCCTCCTTGAGTTGTTT | + |
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Preference number: 3 (lower is better) Translates to: LPCHEGPRSSKL*AKINLSLLELF Trigger: AAACAACTCAAGGAGGGAGAGATTTATTTTGGCTCACAGTTTAGAAGACCTCGGTCCCTCATGGCAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
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| 3UTR CCA 72 bp | TGTTTATTCCTCTGGTTACATTTGAGGCCAGGTACTTaGGTCAGTCAAGAGATACCACCAAACCACTTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: CLFLWLHLRPGT*VSQEIPPNHFL Trigger: GAGGAAGTGGTTTGGTGGTATCTCTTGACTGACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAATAAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CCA 72 bp | ATCCTAGCTTCTGGTCAACTTCTGTGTTTATTCCTCTaGTTACATTTGAGGCCAGGTACTTGGGTCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: ILASGQLLCLFL*LHLRPGTWVSQ Trigger: TTGACTGACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAATAAACACAGAAGTTGACCAGAAGCTAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CCA 72 bp | AGCTGCCTCAAGCAAACACGCTCACATCCTAGCTTCTaGTCAACTTCTGTGTTTATTCCTCTGGTTACATTT | + |
|
Preference number: 3 (lower is better) Translates to: SCLKQTRSHPSF*STSVFIPLVTF Trigger: AAATGTAACCAGAGGAATAAACACAGAAGTTGACCAGAAGCTAGGATGTGAGCGTGTTTGCTTGAGGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CCA 72 bp | GTAAACATACTATGGTACATGGATATTGCAAACCAATaGCAAGGGAGATATGCATATGATGAAATTCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VNILWYMDIANQ*QGRYAYDEIQN Trigger: ATTCTGAATTTCATCATATGCATATCTCCCTTGCCATTGGTTTGCAATATCCATGTACCATAGTATGTTTAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR TCA 90 bp | TCCAGATGTCCAACCCTGGCCCCTCTTCAGTTCCTATCAAAGGGCCGAGGGAGGTGGCCTGTGCAGTCTTaGTGGGATAGGCTACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCPTLAPLQFLSKGRGRWPVQS*WDRLLP Trigger: AGGCAGTAGCCTATCCCATCAAGACTGCACAGGCCA...CCTCCCTCGGCCCTTTGATAGGAACTGAAGAGGGGCCAGGGTTGGACATCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR TCA 90 bp | CAAATCCAGATGTCCAACCCTGGCCCCTCTTCAGTTCCTATCAAAGGGCCGAGGGCTCAAAGCAGCGGGTaGTGTTGCCTGAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIQMSNPGPSSVPIKGPRAQSSG*CCLSHP Trigger: AGGATGGCTCAGGCAACATCACCCGCTGCTTTGAGC...CCTCGGCCCTTTGATAGGAACTGAAGAGGGGCCAGGGTTGGACATCTGGATTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR GCA 90 bp | CCTATCAAAGGGCCGAGGGAGGGGAGGTTCGGGATTAGTCACCCAGATTTCAGCGGCAGCCAGCCACGTTaGACAGGAAGTTGGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PIKGPREGRFGISHPDFSGSQPR*TGSWVE Trigger: TTCTACCCAACTTCCTGTGCAACGTGGCTGGCTGCC...GCTGAAATCTGGGTGACTAATCCCGAACCTCCCCTCCCTCGGCCCTTTGATAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGATGTCCAACCCTGGCCCCTCTTCAGTTCCTATCAAAGGGCCGAGGGAGGCGTTGCACAGGAAGTTaGGTAGAATCCAGTCGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCPTLAPLQFLSKGRGRRCTGS*VESSRP Trigger: AGGGCGACTGGATTCTACCCAACTTCCTGTGCAACG...CCTCCCTCGGCCCTTTGATAGGAACTGAAGAGGGGCCAGGGTTGGACATCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CCA 90 bp | CAAGTGCTCGCTACCTTGCACTACCATCTCACTGGCCCCGTGCCCTGCTCTCTGCTGAGCCATCCTTATTaGGCACTAGGTTGGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVLATLHYHLTGPVPCSLLSHPY*ALGWWS Trigger: ACTCCACCAACCTAGTGCCCAATAAGGATGGCTCAG...CAGAGAGCAGGGCACGGGGCCAGTGAGATGGTAGTGCAAGGTAGCGAGCACTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR TCA 90 bp | CAAGTGCTCGCTACCTTGCACTACCATCTCACTGGCCCCGTGCCCTGCTCTCTGAGAAGCAGAAGGCGATaGAGACATGAACAACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVLATLHYHLTGPVPCSLRSRRR*RHEQQG Trigger: TCCTTGTTGTTCATGTCTTCATCGCCTTCTGCTTCT...CAGAGAGCAGGGCACGGGGCCAGTGAGATGGTAGTGCAAGGTAGCGAGCACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR GCA 90 bp | AAGGGTCACAAGGACCTTGTACCTATAGATGGACCAAGGAAGGCACCATCTGAAATACCGCCAAGACCGTaGAGACCATCCACAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGHKDLVPIDGPRKAPSEIPPRP*RPSTAP Trigger: GGGCGCTGTGGATGGTCTGCACGGTCTTGGCGGTAT...TTCAGATGGTGCCTTCCTTGGTCCATCTATAGGTACAAGGTCCTTGTGACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CAA 72 bp | GCTCTGGGTGAGTCCATCAGCCACAGTCCTCTAGCGTaGACCCAAAGACTAGTGAAAAGGAGCATCCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALGESISHSPLA*TQRLVKRSIQV Trigger: AACCTGGATGCTCCTTTTCACTAGTCTTTGGGTCAACGCTAGAGGACTGTGGCTGATGGACTCACCCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR GCA 90 bp | TGTATATGTATATGGGGAGGCGGGGCATGTGTGTGCCATGGTATGAAAGTAAAGGCGGGTGGTGGCCTGTaGAGTCTTGATGGGATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CICIWGGGACVCHGMKVKAGGGL*SLDGIG Trigger: GCCTATCCCATCAAGACTGCACAGGCCACCACCCGC...CTTTACTTTCATACCATGGCACACACATGCCCCGCCTCCCCATATACATATACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR GCA 90 bp | TTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTGCTTAGCTCAGGGACAAAGAGATaGCACGCTTGCGGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEAVSSRQVLVSLQPLLSSGTKR*HACGWW Trigger: CCACCACCCGCAAGCGTGGCATCTCTTTGTCCCTGA...GCTAAGCAGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CCA 90 bp | TACCGTGCCTTCCTTGCCATGAGGGACCGAGGTCTTCTAAACTGTGAGCCAAAATGGGCACTAGGTTGGTaGAGTCTGTGGCCAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRAFLAMRDRGLLNCEPKWALGW*SLWPGN Trigger: ATTTCCTGGCCACAGACTCCACCAACCTAGTGCCCA...TTTTGGCTCACAGTTTAGAAGACCTCGGTCCCTCATGGCAAGGAAGGCACGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTGTAGACAATCCACAGTaGGAGGGTGATCAGGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WPLGSCVFSPSSCFSPTSVDNPQ*EGDQEE Trigger: CTCTTCCTGATCACCCTCCCACTGTGGATTGTCTAC...AGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAAGGGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CAA 72 bp | CTTAGCCTAACACATCTGCTTTCTTTGAAAAGCCACTaGTCTGCCAGTCACCTAGGTGGCCACCCAACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSLTHLLSLKSH*SASHLGGHPTH Trigger: GTGGGTTGGGTGGCCACCTAGGTGACTGGCAGACAAGTGGCTTTTCAAAGAAAGCAGATGTGTTAGGCTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR TCA 90 bp | TACCGTGCCTTCCTTGCCATGAGGGACCGAGGTCTTCTAAACTGTGAGCCAAAAAGGCAGAGGGTGATTTaGTGGGCATCATTAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: YRAFLAMRDRGLLNCEPKRQRVI*WASLIA Trigger: GGCTATTAATGATGCCCATCAAATCACCCTCTGCCT...TTTTGGCTCACAGTTTAGAAGACCTCGGTCCCTCATGGCAAGGAAGGCACGGTA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGCACTTGGTCCCTCTGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTAACTTCTCACTGAGGTaGTTTCGGAACTTCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EKALGPSGPLEAVSSRQVNFSLR*FRNFLV Trigger: TACCAAGAAGTTCCGAAAGCACCTCAGTGAGAAGTT...AACTTGGCGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CCA 90 bp | AAGGGTCACAAGGACCTTGTACCTATAGATGGACCAAGGAAGGCACCATCTGAATATTGGGCACTAGGTTaGTGGAGTCTGTGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGHKDLVPIDGPRKAPSEYWALG*WSLWPG Trigger: TCCTGGCCACAGACTCCACCAACCTAGTGCCCAATA...TTCAGATGGTGCCTTCCTTGGTCCATCTATAGGTACAAGGTCCTTGTGACCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CAA 72 bp | CTCCAACCTCTGCTTAGCCTAACACATCTGCTTTCTTaGAAAAGCCACTTGTCTGCCAGTCACCTAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPLLSLTHLLS*KSHLSASHLGG Trigger: GCCACCTAGGTGACTGGCAGACAAGTGGCTTTTCAAAGAAAGCAGATGTGTTAGGCTAAGCAGAGGTTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR GCA 90 bp | ACTTCTGTGTTTATTCCTCTGGTTACATTTGAGGCCAGGTACTTGGGTCAGTCAAGCACTTCCGGCTACTaGGCATGCTGTAAAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSVFIPLVTFEARYLGQSSTSGY*ACCKTS Trigger: AGAAGTTTTACAGCATGCGCAGTAGCCGGAAGTGCT...TGACTGACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAATAAACACAGAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CAA 72 bp | GTGTTTATTCCTCTGGTTACATTTGAGGCCAGGTACTaGGGTCAGTCAAGAGATACCACCAAACCACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFIPLVTFEARY*GQSRDTTKPLP Trigger: AGGAAGTGGTTTGGTGGTATCTCTTGACTGACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAATAAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CAA 72 bp | TCTGGTCAACTTCTGTGTTTATTCCTCTGGTTACATTaGAGGCCAGGTACTTGGGTCAGTCAAGAGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: SGQLLCLFLWLH*RPGTWVSQEIP Trigger: TGGTATCTCTTGACTGACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAATAAACACAGAAGTTGACCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| 3UTR CAA 72 bp | TACCATATTAACATAGAAACAGAGAATGTTATTTCATaGAGAGCACTAGACACCCATTCCAATGAGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YHINIETENVIS*RALDTHSNELK Trigger: CTTAAGCTCATTGGAATGGGTGTCTAGTGCTCTCAATGAAATAACATTCTCTGTTTCTATGTTAATATGGTA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS GCA 90 bp | GTGCAGACCATCCACAGCGCCCTCCGCTTCACCCCCGCTTTGCGCTaGTGCCTCATGGGCTGCGTGAGCAGCGTGTGGATGATGACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQTIHSALRFTPALR*CLMGCVSSVWMMTK Trigger: CTTGGTCATCATCCACACGCTGCTCACGCAGCCCATGAGGCAGCAGCGCAAAGCGGGGGTGAAGCGGAGGGCGCTGTGGATGGTCTGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS GCA 90 bp | CAGACCATCCACAGCGCCCTCCGCTTCACCCCCGCTTTGCGCTGCTaGCTCATGGGCTGCGTGAGCAGCGTGTGGATGATGACCAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QTIHSALRFTPALRC*LMGCVSSVWMMTKL Trigger: CAACTTGGTCATCATCCACACGCTGCTCACGCAGCCCATGAGGCAGCAGCGCAAAGCGGGGGTGAAGCGGAGGGCGCTGTGGATGGTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | CAAGTGCTCGCTACCTTGCACTACCATCTCACTGGCCCCGTGCCCTGCTCTCTGACAATAGGAGTCTGGTaGGCTGGCACTATCACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QVLATLHYHLTGPVPCSLTIGVW*AGTITS Trigger: CGAGGTGATAGTGCCAGCCAACCAGACTCCTATTGT...CAGAGAGCAGGGCACGGGGCCAGTGAGATGGTAGTGCAAGGTAGCGAGCACTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS CCA 90 bp | GAGTCTGGTTGGCTGGCACTATCACCTCGGTGCACGTGTCACTCGTaGCTCTGGAGCACTTCCGGCTACTGCGCATGCTGTAAAACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ESGWLALSPRCTCHS*LWSTSGYCACCKTS Trigger: AGAAGTTTTACAGCATGCGCAGTAGCCGGAAGTGCTCCAGAGCCACGAGTGACACGTGCACCGAGGTGATAGTGCCAGCCAACCAGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | TGTATATGTATATGGGGAGGCGGGGCATGTGTGTGCCATGGTATGAAAGTAAAGCGCTTCACCCCCGCTTaGCGCTGCTGCCTCATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CICIWGGGACVCHGMKVKRFTPA*RCCLMG Trigger: GCCCATGAGGCAGCAGCGCAAAGCGGGGGTGAAGCG...CTTTACTTTCATACCATGGCACACACATGCCCCGCCTCCCCATATACATATACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS GCA 90 bp | ACGCTTGCGGGTGGTGGCCTGTGCAGTCTTGATGGGATAGGCTACTaGCTGGTAGCGGTTATAAGTGATGACACCCAAAAAGGCCACACT | + |
|
Preference number: 5 (lower is better) Translates to: TLAGGGLCSLDGIGY*LVAVISDDTQKGHT Trigger: AGTGTGGCCTTTTTGGGTGTCATCACTTATAACCGCTACCAGGCAGTAGCCTATCCCATCAAGACTGCACAGGCCACCACCCGCAAGCGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS GCA 90 bp | AATGATCAGGGACAAAGAGATGCCACGCTTGCGGGTGGTGGCCTGTaGAGTCTTGATGGGATAGGCTACTGCCTGGTAGCGGTTATAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NDQGQRDATLAGGGL*SLDGIGYCLVAVIS Trigger: ACTTATAACCGCTACCAGGCAGTAGCCTATCCCATCAAGACTGCACAGGCCACCACCCGCAAGCGTGGCATCTCTTTGTCCCTGATCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTTTATTGGGCACTAGGTaGGTGGAGTCTGTGGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPLGSCVFSPSSCFSPTSLLGTR*VESVAR Trigger: CCTGGCCACAGACTCCACCAACCTAGTGCCCAATAA...AGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAAGGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS TCA 90 bp | CAAGGATGGGCACACTGTATGGCTCATAATGCTCAAAGCAGCGGGTaGTGTTGCCTGAGCCATCCTTATTGGGCACTAGGTTGGTGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QGWAHCMAHNAQSSG*CCLSHPYWALGWWS Trigger: ACTCCACCAACCTAGTGCCCAATAAGGATGGCTCAGGCAACATCACCCGCTGCTTTGAGCATTATGAGCCATACAGTGTGCCCATCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGCACTTGGTCCCTCTGGCCCCTTGGAAGCTGTGTCTTCTCGCCAAGTTGAGGCAGAGGGTGATTaGATGGGCATCATTAATAGC | + |
|
Preference number: 5 (lower is better) Translates to: EKALGPSGPLEAVSSRQVEAEGD*MGIINS Trigger: GCTATTAATGATGCCCATCAAATCACCCTCTGCCTC...AACTTGGCGAGAAGACACAGCTTCCAAGGGGCCAGAGGGACCAAGTGCTTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | TGTATATGTATATGGGGAGGCGGGGCATGTGTGTGCCATGGTATGAAAGTAAAGACGTTGCACAGGAAGTaGGGTAGAATCCAGTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CICIWGGGACVCHGMKVKTLHRK*GRIQSP Trigger: GGGCGACTGGATTCTACCCAACTTCCTGTGCAACGT...CTTTACTTTCATACCATGGCACACACATGCCCCGCCTCCCCATATACATATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | ACTTCTGTGTTTATTCCTCTGGTTACATTTGAGGCCAGGTACTTGGGTCAGTCAAGGCAGCCAGCCACGTaGCACAGGAAGTTGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TSVFIPLVTFEARYLGQSRQPAT*HRKLGR Trigger: TCTACCCAACTTCCTGTGCAACGTGGCTGGCTGCCT...TGACTGACCCAAGTACCTGGCCTCAAATGTAACCAGAGGAATAAACACAGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | AATGTTATTTCATTGAGAGCACTAGACACCCATTCCAATGAGCTTAAGGAAGGAAAAGAGATGCCACGCTaGCGGGTGGTGGCCTGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: NVISLRALDTHSNELKEGKEMPR*RVVACA Trigger: TGCACAGGCCACCACCCGCAAGCGTGGCATCTCTTT...TCCTTCCTTAAGCTCATTGGAATGGGTGTCTAGTGCTCTCAATGAAATAACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS-3UTR CAA 90 bp | TTGGAAGCTGTGTCTTCTCGCCAAGTTCTTGTTTCTCTCCAACCTCTGCTTAGCATCTCATTTAGTTTCTaGGAAGGGTACAAGTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LEAVSSRQVLVSLQPLLSISFSF*EGYKLA Trigger: TGCTAACTTGTACCCTTCCAAGAAACTAAATGAGAT...GCTAAGCAGAGGTTGGAGAGAAACAAGAACTTGGCGAGAAGACACAGCTTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS GCA 72 bp | ATCCACAGCGCCCTCCGCTTCACCCCCGCTTTGCGCTaGTGCCTCATGGGCTGCGTGAGCAGCGTGTGGATG | + |
|
Preference number: 6 (lower is better) Translates to: IHSALRFTPALR*CLMGCVSSVWM Trigger: CATCCACACGCTGCTCACGCAGCCCATGAGGCAGCAGCGCAAAGCGGGGGTGAAGCGGAGGGCGCTGTGGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS CCA 72 bp | TGGCTGGCACTATCACCTCGGTGCACGTGTCACTCGTaGCTCTGGAGCACTTCCGGCTACTGCGCATGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WLALSPRCTCHS*LWSTSGYCACC Trigger: ACAGCATGCGCAGTAGCCGGAAGTGCTCCAGAGCCACGAGTGACACGTGCACCGAGGTGATAGTGCCAGCCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS GCA 72 bp | GGACAAAGAGATGCCACGCTTGCGGGTGGTGGCCTGTaGAGTCTTGATGGGATAGGCTACTGCCTGGTAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GQRDATLAGGGL*SLDGIGYCLVA Trigger: CGCTACCAGGCAGTAGCCTATCCCATCAAGACTGCACAGGCCACCACCCGCAAGCGTGGCATCTCTTTGTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS TCA 72 bp | CCCAACTCTGCTAGGGTCCAGGGCAGCTGGACCACGTaGTGGGGCACAAAACAGATGATGAATACCGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: PNSARVQGSWTT*WGTKQMMNTAK Trigger: CTTGGCGGTATTCATCATCTGTTTTGTGCCCCATCACGTGGTCCAGCTGCCCTGGACCCTAGCAGAGTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS CCA 72 bp | GCACTATCACCTCGGTGCACGTGTCACTCGTGGCTCTaGAGCACTTCCGGCTACTGCGCATGCTGTAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: ALSPRCTCHSWL*STSGYCACCKT Trigger: AGTTTTACAGCATGCGCAGTAGCCGGAAGTGCTCCAGAGCCACGAGTGACACGTGCACCGAGGTGATAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS CAA 72 bp | TCAAAGCAGCGGGTGATGTTGCCTGAGCCATCCTTATaGGGCACTAGGTTGGTGGAGTCTGTGGCCAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SKQRVMLPEPSL*GTRLVESVARK Trigger: TTTCCTGGCCACAGACTCCACCAACCTAGTGCCCAATAAGGATGGCTCAGGCAACATCACCCGCTGCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS GCA 72 bp | GGTGGTGGCCTGTGCAGTCTTGATGGGATAGGCTACTaGCTGGTAGCGGTTATAAGTGATGACACCCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: GGGLCSLDGIGY*LVAVISDDTQK Trigger: TTTTTGGGTGTCATCACTTATAACCGCTACCAGGCAGTAGCCTATCCCATCAAGACTGCACAGGCCACCACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||
| CDS CCA 72 bp | GATGAAGACATGAACAACAAGGATGGGCACACTGTATaGCTCATAATGCTCAAAGCAGCGGGTGATGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: DEDMNNKDGHTV*LIMLKAAGDVA Trigger: GGCAACATCACCCGCTGCTTTGAGCATTATGAGCCATACAGTGTGCCCATCCTTGTTGTTCATGTCTTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070690.8 |
||