Pregenerated sensors for PSTPIP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025429Ensembl transcript IDs: ENSMUST00000114741.4, ENSMUST00000238172.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTAAGAACAAAGGTAGTTTTAAACGCTGCACCACTGAGAGAGGGTaGCCGTTCCCCCGGGCCTCCTTCCCACAGCCCACGGAGCATCTT | + |
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Preference number: 1 (lower is better) Translates to: AKNKGSFKRCTTERG*PFPRASFPQPTEHL Trigger: AAGATGCTCCGTGGGCTGTGGGAAGGAGGCCCGGGGGAACGGGCACCCTCTCTCAGTGGTGCAGCGTTTAAAACTACCTTTGTTCTTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR GCA 90 bp | CTGTGTATGTCTGTGTGTCTGTCTGCCTGTGCATGTGTCAGTCACTaGTATGCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTG | + |
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Preference number: 1 (lower is better) Translates to: LCMSVCLSACACVSH*YAHVWRPEEPHTCV Trigger: CACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGCATAGCAGTGACTGACACATGCACAGGCAGACAGACACACAGACATACACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR CCA 90 bp | ACAAGGATTCACATCAAAGTCTTCATGATCGACGCGATTTGGTTATaGACTGCTGCTCTCTGGATCTCACATCATGTCACAGAAGCAGTA | + |
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Preference number: 1 (lower is better) Translates to: TRIHIKVFMIDAIWL*TAALWISHHVTEAV Trigger: TACTGCTTCTGTGACATGATGTGAGATCCAGAGAGCAGCAGTCCATAACCAAATCGCGTCGATCATGAAGACTTTGATGTGAATCCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR GCA 90 bp | GCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGGGTCCCAGGGATGGACCACCTCCGCAGCTCTaGTCAAGCCAACGCTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: AHVWRPEEPHTCVGPRDGPPPQL*SSQRLG Trigger: TCCTAAGCGTTGGCTTGAGCAGAGCTGCGGAGGTGG...TCCATCCCTGGGACCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR GCA 90 bp | GCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGGGTCCCAGGGATGGAAAACTGATCTCACCCTaGTGGGTCTCACTTTCCCAT | + |
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Preference number: 2 (lower is better) Translates to: AHVWRPEEPHTCVGPRDGKLISP*WVSLSH Trigger: ATGGGAAAGTGAGACCCAGCAGGGTGAGATCAGTTT...TCCATCCCTGGGACCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTCACTGCTATGCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGATCCAGAGTGGCTCTaGTTCCCCGACAGGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: CQSLLCTCVEARGTPHMCDPEWL*FPDRKQ Trigger: TTGTTTCCTGTCGGGGAAGCAGAGCCACTCTGGATC...ACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGCATAGCAGTGACTGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCATCAGAATTGTAAGGAAACTGATCTCACCCTGCTGGGTCTCACTTTCCCAAGCATCTTTGGAAACTaGAGCCACCTCCGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GHQNCKETDLTLLGLTFPSIFGN*SHLRSS Trigger: AGAGCTGCGGAGGTGGCTCCAGTTTCCAAAGATGCT...TGGGAAAGTGAGACCCAGCAGGGTGAGATCAGTTTCCTTACAATTCTGATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR CCA 90 bp | GGCCATCAGAATTGTAAGGAAACTGATCTCACCCTGCTGGGTCTCACTTTCCCATGGACTGCTGCTCTCTaGATCTCACATCATGTCACA | + |
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Preference number: 2 (lower is better) Translates to: GHQNCKETDLTLLGLTFPWTAAL*ISHHVT Trigger: TGTGACATGATGTGAGATCCAGAGAGCAGCAGTCCA...TGGGAAAGTGAGACCCAGCAGGGTGAGATCAGTTTCCTTACAATTCTGATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR TCA 90 bp | GGCCATCAGAATTGTAAGGAAACTGATCTCACCCTGCTGGGTCTCACTTTCCCACACAGAAGCAGTAGCTaGGGAAAGCTTTCTTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: GHQNCKETDLTLLGLTFPHRSSS*GKLSFH Trigger: GTGAAAAGAAAGCTTTCCTCAGCTACTGCTTCTGTG...TGGGAAAGTGAGACCCAGCAGGGTGAGATCAGTTTCCTTACAATTCTGATGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTAGATACAAACAAGAGTGTACTTTACAATCCAGGGCCTCACAGATTAAGCAGCCCACAGGAGCATaGCAGCCACACAAACGGCTA | + |
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Preference number: 2 (lower is better) Translates to: LPRYKQECTLQSRASQIKQPTGA*QPHKRL Trigger: TAGCCGTTTGTGTGGCTGCCATGCTCCTGTGGGCTG...CTTAATCTGTGAGGCCCTGGATTGTAAAGTACACTCTTGTTTGTATCTAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR-3UTR GCA 90 bp | TCCTTTTTAAATGTGTGTTTGTATGTGTGTGTATGTGTGTGTGTATGTGTGTCTGATTTGGTTATGGACTaGTGCTCTCTGGATCTCACA | + |
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Preference number: 2 (lower is better) Translates to: SFLNVCLYVCVCVCVCVSDLVMD*CSLDLT Trigger: TGTGAGATCCAGAGAGCAGCAGTCCATAACCAAATC...AGACACACATACACACACACATACACACACATACAAACACACATTTAAAAAGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR GCA 72 bp | AAAGGTAGTTTTAAACGCTGCACCACTGAGAGAGGGTaGCCGTTCCCCCGGGCCTCCTTCCCACAGCCCACG | + |
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Preference number: 3 (lower is better) Translates to: KGSFKRCTTERG*PFPRASFPQPT Trigger: CGTGGGCTGTGGGAAGGAGGCCCGGGGGAACGGGCACCCTCTCTCAGTGGTGCAGCGTTTAAAACTACCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR CCA 72 bp | CACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTaGGTCCCAGGGATGGAACACGGGCCATCAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: HMCGGQRNPTHV*VPGMEHGPSGL Trigger: CAAGCCTGATGGCCCGTGTTCCATCCCTGGGACCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR CCA 72 bp | ATGATCGACGCGATTTGGTTATGGACTGCTGCTCTCTaGATCTCACATCATGTCACAGAAGCAGTAGCTGAG | + |
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Preference number: 3 (lower is better) Translates to: MIDAIWLWTAAL*ISHHVTEAVAE Trigger: CTCAGCTACTGCTTCTGTGACATGATGTGAGATCCAGAGAGCAGCAGTCCATAACCAAATCGCGTCGATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR TCA 72 bp | ACAATTTTTCAACAAGGATTCACATCAAAGTCTTCATaGTCGACGCGATTTGGTTATGGACTGCTGCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: TIFQQGFTSKSS*STRFGYGLLLS Trigger: AGAGAGCAGCAGTCCATAACCAAATCGCGTCGATCATGAAGACTTTGATGTGAATCCTTGTTGAAAAATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR TCA 90 bp | GCTGCACCACTGAGAGAGGGTGCCCGTTCCCCCGGGCCTCCTTCCCACAGCCCAAGAAGTTCTCATACATaGTGGGTGCTGGGGGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: AAPLREGARSPGPPSHSPRSSHT*WVLGES Trigger: AGACTCCCCCAGCACCCATCATGTATGAGAACTTCT...TGGGCTGTGGGAAGGAGGCCCGGGGGAACGGGCACCCTCTCTCAGTGGTGCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | AGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGCTCTGCTCAAGCCAGGTCCTCTCCTTGCTaGATTGGGCCCTGTAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SPRSIFGNWSHLRSSAQARSSPC*IGPCSL Trigger: AAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCT...GGCTTGAGCAGAGCTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR TCA 90 bp | GCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGGGTCCCAGGGATGGATGTCTACTTGCTGCTTaGAGACCTCAAGGGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: AHVWRPEEPHTCVGPRDGCLLAA*RPQGLS Trigger: AGAGAGCCCTTGAGGTCTTCAAGCAGCAAGTAGACA...TCCATCCCTGGGACCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | TTCCCACAGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGCTCTGCTCTGTCTTTTTCCGCTaGAGCTTCTGCTTTTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: FPQPTEHLWKLEPPPQLCSVFFR*SFCFSR Trigger: CCGGGAAAAGCAGAAGCTGCAGCGGAAAAAGACAGA...GCAGAGCTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCTGTGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | CTGTCTGCCTGTGCATGTGTCAGTCACTGCTATGCACATGTGTGGAGGCCAGAGCTGCGGTGGACAGCTTaGTCTGCCTCATCCTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LSACACVSHCYAHVWRPELRWTA*SASSLS Trigger: GGACAAGGATGAGGCAGAGCAAGCTGTCCACCGCAG...CTCTGGCCTCCACACATGTGCATAGCAGTGACTGACACATGCACAGGCAGACAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | GCCTCCTTCCCACAGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGATACATGATGGGTGCTaGGGGAGTCTGTCCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: ASFPQPTEHLWKLEPPPQIHDGC*GSLSSF Trigger: AAAACTGGACAGACTCCCCCAGCACCCATCATGTAT...CTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCTGTGGGAAGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR TCA 90 bp | CATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGGGTCCCAGGGATGGAACACCTTCTCCAGCATGTTaGTGTGCAACATGTACGCTT | + |
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Preference number: 4 (lower is better) Translates to: HVWRPEEPHTCVGPRDGTPSPAC*CATCTL Trigger: AAGCGTACATGTTGCACATCAACATGCTGGAGAAGG...TGTTCCATCCCTGGGACCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR TCA 90 bp | AGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGCTCTGCTCAAGCCCATTGTTGTGACAGCTaGTTCAGATGCAACCACAGT | + |
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Preference number: 4 (lower is better) Translates to: SPRSIFGNWSHLRSSAQAHCCDS*FRCNHS Trigger: ACTGTGGTTGCATCTGAATCAGCTGTCACAACAATG...GGCTTGAGCAGAGCTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | TTCCCACAGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGCTCTGCGCGTTCCTTTGCTTGTaGGCAGCATCCATTATTGTT | + |
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Preference number: 4 (lower is better) Translates to: FPQPTEHLWKLEPPPQLCAFLCL*AASIIV Trigger: AACAATAATGGATGCTGCCCACAAGCAAAGGAACGC...GCAGAGCTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCTGTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| 3UTR CAA 72 bp | CCACACAAACGGCTAGAACAGCCCTGTGCCAGAAAGTaGTGCTCTAGCTCTGGTTCTGCCTCTCATTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: PHKRLEQPCARK*CSSSGSASHWP Trigger: TGGCCAATGAGAGGCAGAACCAGAGCTAGAGCACAACTTTCTGGCACAGGGCTGTTCTAGCCGTTTGTGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | CAGTCACTGCTATGCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGGGACGTTGTCTACTTGCTaGTTGAAGACCTCAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QSLLCTCVEARGTPHMCGTLSTC*LKTSRA Trigger: AGCCCTTGAGGTCTTCAAGCAGCAAGTAGACAACGT...CCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGCATAGCAGTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | CTGGTTCTGCCTCTCATTGGCCATCAGAATTGTAAGGAAACTGATCTCACCCTGCTTGTTGCCGTTGGTTaGCCACATTGGCGCTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: LVLPLIGHQNCKETDLTLLVAVG*PHWRCG Trigger: ACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAG...CAGGGTGAGATCAGTTTCCTTACAATTCTGATGGCCAATGAGAGGCAGAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | AGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGCTCTGCTCAAGCCAAACTCTTACGGACTTaGTCATACATCTCGTCATTT | + |
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Preference number: 4 (lower is better) Translates to: SPRSIFGNWSHLRSSAQAKLLRT*SYISSF Trigger: AAATGACGAGATGTATGAGCAAGTCCGTAAGAGTTT...GGCTTGAGCAGAGCTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | CAGTCACTGCTATGCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGGGCTGCAGTCTTTGAAGTaGCCAGTTTCACAAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: QSLLCTCVEARGTPHMCGLQSLK*PVSQKA Trigger: AGCTTTTTGTGAAACTGGCCACTTCAAAGACTGCAG...CCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGCATAGCAGTGACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | GGCCATCAGAATTGTAAGGAAACTGATCTCACCCTGCTGGGTCTCACTTTCCCAGGCTTTCTTGAACTGTaGGTTCCTTTGCTTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GHQNCKETDLTLLGLTFPGFLEL*VPLLVG Trigger: GCCCACAAGCAAAGGAACGCACAGTTCAAGAAAGCC...TGGGAAAGTGAGACCCAGCAGGGTGAGATCAGTTTCCTTACAATTCTGATGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | CTGTCTGCCTGTGCATGTGTCAGTCACTGCTATGCACATGTGTGGAGGCCAGAGTGGTTCACAAAATACTaGATGTCCTTCTCAATGCTG | + |
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Preference number: 4 (lower is better) Translates to: LSACACVSHCYAHVWRPEWFTKY*MSFSML Trigger: CAGCATTGAGAAGGACATCCAGTATTTTGTGAACCA...CTCTGGCCTCCACACATGTGCATAGCAGTGACTGACACATGCACAGGCAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR TCA 90 bp | GCTCTCTGGATCTCACATCATGTCACAGAAGCAGTAGCTGAGGAAAGCTTTCTTTGCGACACATTGTTGTaGCAGCTGATTCAGATGCAA | + |
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Preference number: 4 (lower is better) Translates to: ALWISHHVTEAVAEESFLCDTLL*QLIQMQ Trigger: TTGCATCTGAATCAGCTGTCACAACAATGTGTCGCA...AAGAAAGCTTTCCTCAGCTACTGCTTCTGTGACATGATGTGAGATCCAGAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | GCTCTCTGGATCTCACATCATGTCACAGAAGCAGTAGCTGAGGAAAGCTTTCTTCAGATGCAACCACAGTaGATTCCGGAAGAAGTTGAT | + |
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Preference number: 4 (lower is better) Translates to: ALWISHHVTEAVAEESFLQMQPQ*IPEEVD Trigger: ATCAACTTCTTCCGGAATGCACTGTGGTTGCATCTG...AAGAAAGCTTTCCTCAGCTACTGCTTCTGTGACATGATGTGAGATCCAGAGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | CTGGTTCTGCCTCTCATTGGCCATCAGAATTGTAAGGAAACTGATCTCACCCTGTGTCCAGTTTTCCGCTaGTTCACAAAATACTGGATG | + |
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Preference number: 4 (lower is better) Translates to: LVLPLIGHQNCKETDLTLCPVFR*FTKYWM Trigger: CATCCAGTATTTTGTGAACCAGCGGAAAACTGGACA...CAGGGTGAGATCAGTTTCCTTACAATTCTGATGGCCAATGAGAGGCAGAACCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR TCA 90 bp | TCCTTTTTAAATGTGTGTTTGTATGTGTGTGTATGTGTGTGTGTATGTGTGTCTCTCTCTTCAAGGTATTaGTCTCAGACTGTCCACACG | + |
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Preference number: 4 (lower is better) Translates to: SFLNVCLYVCVCVCVCVSLSSRY*SQTVHT Trigger: CGTGTGGACAGTCTGAGATCAATACCTTGAAGAGAG...AGACACACATACACACACACATACACACACATACAAACACACATTTAAAAAGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | CTAGATACAAACAAGAGTGTACTTTACAATCCAGGGCCTCACAGATTAAGATCTAGTCTTCAAACTCCTTaGAGTTCTTACGGCCATTGT | + |
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Preference number: 4 (lower is better) Translates to: LDTNKSVLYNPGPHRLRSSLQTP*SSYGHC Trigger: ACAATGGCCGTAAGAACTGCAAGGAGTTTGAAGACT...AGATCTTAATCTGTGAGGCCCTGGATTGTAAAGTACACTCTTGTTTGTATCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR GCA 90 bp | CTAGATACAAACAAGAGTGTACTTTACAATCCAGGGCCTCACAGATTAAGATCTGGTTCAGCAGGTCTTTaGCATATTTCTCTTCAATTG | + |
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Preference number: 4 (lower is better) Translates to: LDTNKSVLYNPGPHRLRSGSAGL*HISLQL Trigger: CAATTGAAGAGAAATATGGCAAAGACCTGCTGAACC...AGATCTTAATCTGTGAGGCCCTGGATTGTAAAGTACACTCTTGTTTGTATCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CCA 90 bp | TCCTTTTTAAATGTGTGTTTGTATGTGTGTGTATGTGTGTGTGTATGTGTGTCTATTCTTCCATCTTCCTaGCCTCTTCTCTTAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: SFLNVCLYVCVCVCVCVSILPSS*PLLLES Trigger: AGACTCTAAGAGAAGAGGCCAGGAAGATGGAAGAAT...AGACACACATACACACACACATACACACACATACAAACACACATTTAAAAAGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CAA 90 bp | GCCTCCTTCCCACAGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGCCTCTCCTTGCTGGATaGGGCCCTGTAGTCTTTCCT | + |
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Preference number: 5 (lower is better) Translates to: ASFPQPTEHLWKLEPPPQPLLAG*GPVVFP Trigger: AGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGG...CTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCTGTGGGAAGGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS GCA 90 bp | AGGATCATCTGGTATCCGCTTAGGGACAGGGAGAGGTCCTCTCCTTaGTGGATTGGGCCCTGTAGTCTTTCCTGGTGGGGCAGCATTCCG | + |
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Preference number: 5 (lower is better) Translates to: RIIWYPLRDRERSSP*WIGPCSLSWWGSIP Trigger: CGGAATGCTGCCCCACCAGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCTCTCCCTGTCCCTAAGCGGATACCAGATGATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 90 bp | ATCATCTGGTATCCGCTTAGGGACAGGGAGAGGTCCTCTCCTTGCTaGATTGGGCCCTGTAGTCTTTCCTGGTGGGGCAGCATTCCGCTG | + |
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Preference number: 5 (lower is better) Translates to: IIWYPLRDRERSSPC*IGPCSLSWWGSIPL Trigger: CAGCGGAATGCTGCCCCACCAGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCTCTCCCTGTCCCTAAGCGGATACCAGATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS-3UTR CAA 90 bp | GCCTCCTTCCCACAGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGTTGTCTACTTGCTGCTaGAAGACCTCAAGGGCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ASFPQPTEHLWKLEPPPQLSTCC*KTSRAL Trigger: GAGAGCCCTTGAGGTCTTCAAGCAGCAAGTAGACAA...CTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCTGTGGGAAGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CAA 90 bp | GCCTCCTTCCCACAGCCCACGGAGCATCTTTGGAAACTGGAGCCACCTCCGCAGGCATCCATGGCTTTCTaGAACTGTGCGTTCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: ASFPQPTEHLWKLEPPPQASMAF*NCAFLC Trigger: GCAAAGGAACGCACAGTTCAAGAAAGCCATGGATGC...CTGCGGAGGTGGCTCCAGTTTCCAAAGATGCTCCGTGGGCTGTGGGAAGGAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS-3UTR CAA 90 bp | TGTCAGTCACTGCTATGCACATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGCTGCGGTGGACAGCTaGCTCTGCCTCATCCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: CQSLLCTCVEARGTPHMCAAVDS*LCLILV Trigger: GACAAGGATGAGGCAGAGCAAGCTGTCCACCGCAGC...ACACATGTGTGGGGTTCCTCTGGCCTCCACACATGTGCATAGCAGTGACTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS CCA 90 bp | CCAGTTTCACAAAAAGCTTTTCTTGTTGCCGTTGGTTGGCCACATTaGCGCTGCGGTGGACAGCTTGCTCTGCCTCATCCTTGTCCCGGC | + |
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Preference number: 5 (lower is better) Translates to: PVSQKAFLVAVGWPH*RCGGQLALPHPCPG Trigger: GCCGGGACAAGGATGAGGCAGAGCAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTGTGAAACTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 90 bp | AGGGAGAGGTCCTCTCCTTGCTGGATTGGGCCCTGTAGTCTTTCCTaGTGGGGCAGCATTCCGCTGAGGAGAGTAGAAGTTCTCATACAT | + |
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Preference number: 5 (lower is better) Translates to: RERSSPCWIGPCSLS*WGSIPLRRVEVLIH Trigger: ATGTATGAGAACTTCTACTCTCCTCAGCGGAATGCTGCCCCACCAGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCTCTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 90 bp | GAGAGGTCCTCTCCTTGCTGGATTGGGCCCTGTAGTCTTTCCTGGTaGGGCAGCATTCCGCTGAGGAGAGTAGAAGTTCTCATACATGAT | + |
|
Preference number: 5 (lower is better) Translates to: ERSSPCWIGPCSLSW*GSIPLRRVEVLIHD Trigger: ATCATGTATGAGAACTTCTACTCTCCTCAGCGGAATGCTGCCCCACCAGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS-3UTR CAA 90 bp | CATGTGTGGAGGCCAGAGGAACCCCACACATGTGTGGGTCCCAGGGATGGAACAAAGTCTTCAAACTCCTaGCAGTTCTTACGGCCATTG | + |
|
Preference number: 5 (lower is better) Translates to: HVWRPEEPHTCVGPRDGTKSSNS*QFLRPL Trigger: CAATGGCCGTAAGAACTGCAAGGAGTTTGAAGACTT...TGTTCCATCCCTGGGACCCACACATGTGTGGGGTTCCTCTGGCCTCCACACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS GCA 90 bp | ACTGCAGTCTTTGAAGTGGCCAGTTTCACAAAAAGCTTTTCTTGTTaGCGTTGGTTGGCCACATTGGCGCTGCGGTGGACAGCTTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAVFEVASFTKSFSC*RWLATLALRWTACS Trigger: AGAGCAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTGTGAAACTGGCCACTTCAAAGACTGCAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS-3UTR CAA 90 bp | GGCCATCAGAATTGTAAGGAAACTGATCTCACCCTGCTGGGTCTCACTTTCCCACCTCTACTGCAGTCTTaGAAGTGGCCAGTTTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: GHQNCKETDLTLLGLTFPPLLQS*KWPVSQ Trigger: TTGTGAAACTGGCCACTTCAAAGACTGCAGTAGAGG...TGGGAAAGTGAGACCCAGCAGGGTGAGATCAGTTTCCTTACAATTCTGATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS CCA 90 bp | TTCTTGGCATCCATGGCTTTCTTGAACTGTGCGTTCCTTTGCTTGTaGGCAGCATCCATTATTGTTTCTGTCTTTTTCCGCTGCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLASMAFLNCAFLCL*AASIIVSVFFRCSF Trigger: GAAGCTGCAGCGGAAAAAGACAGAAACAATAATGGATGCTGCCCACAAGCAAAGGAACGCACAGTTCAAGAAAGCCATGGATGCCAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 90 bp | ATAGAGCAAACTGTAATCTTCAACCACAGAGTAATCAGGATCATCTaGTATCCGCTTAGGGACAGGGAGAGGTCCTCTCCTTGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: IEQTVIFNHRVIRII*YPLRDRERSSPCWI Trigger: AATCCAGCAAGGAGAGGACCTCTCCCTGTCCCTAAGCGGATACCAGATGATCCTGATTACTCTGTGGTTGAAGATTACAGTTTGCTCTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS TCA 90 bp | CCCGGCACTTTTGCTCATAATTCTTCTTGGCATCCATGGCTTTCTTaGACTGTGCGTTCCTTTGCTTGTGGGCAGCATCCATTATTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PGTFAHNSSWHPWLS*TVRSFACGQHPLLF Trigger: AAACAATAATGGATGCTGCCCACAAGCAAAGGAACGCACAGTTCAAGAAAGCCATGGATGCCAAGAAGAATTATGAGCAAAAGTGCCGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS TCA 90 bp | CTTACGGACTTGCTCATACATCTCGTCATTTGCGACACATTGTTGTaGCAGCTGATTCAGATGCAACCACAGTGCATTCCGGAAGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTDLLIHLVICDTLL*QLIQMQPQCIPEEV Trigger: AACTTCTTCCGGAATGCACTGTGGTTGCATCTGAATCAGCTGTCACAACAATGTGTCGCAAATGACGAGATGTATGAGCAAGTCCGTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS TCA 90 bp | ACTTGCTCATACATCTCGTCATTTGCGACACATTGTTGTGACAGCTaGTTCAGATGCAACCACAGTGCATTCCGGAAGAAGTTGATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: TCSYISSFATHCCDS*FRCNHSAFRKKLIR Trigger: ACGAATCAACTTCTTCCGGAATGCACTGTGGTTGCATCTGAATCAGCTGTCACAACAATGTGTCGCAAATGACGAGATGTATGAGCAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS-3UTR CAA 90 bp | TTTCCCATCTGTGAAAATGAGCAAGTCCAATCAGATGCTTCTACAGCTTCCAGCGGGCAGCATCCATTATaGTTTCTGTCTTTTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPICENEQVQSDASTASSGQHPL*FLSFSA Trigger: AGCGGAAAAAGACAGAAACAATAATGGATGCTGCCC...GCTGGAAGCTGTAGAAGCATCTGATTGGACTTGCTCATTTTCACAGATGGGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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| CDS GCA 90 bp | GTCCAGTTTTCCGCTGGTTCACAAAATACTGGATGTCCTTCTCAATaGTGCATGTTTCTAAACTCTTACGGACTTGCTCATACATCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VQFSAGSQNTGCPSQ*CMFLNSYGLAHTSR Trigger: ACGAGATGTATGAGCAAGTCCGTAAGAGTTTAGAAACATGCAGCATTGAGAAGGACATCCAGTATTTTGTGAACCAGCGGAAAACTGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS GCA 90 bp | CTTTTGCTCATAATTCTTCTTGGCATCCATGGCTTTCTTGAACTGTaGGTTCCTTTGCTTGTGGGCAGCATCCATTATTGTTTCTGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLIILLGIHGFLEL*VPLLVGSIHYCFCL Trigger: AAGACAGAAACAATAATGGATGCTGCCCACAAGCAAAGGAACGCACAGTTCAAGAAAGCCATGGATGCCAAGAAGAATTATGAGCAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS GCA 90 bp | CAGTTTTCCGCTGGTTCACAAAATACTGGATGTCCTTCTCAATGCTaGATGTTTCTAAACTCTTACGGACTTGCTCATACATCTCGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QFSAGSQNTGCPSQC*MFLNSYGLAHTSRH Trigger: ATGACGAGATGTATGAGCAAGTCCGTAAGAGTTTAGAAACATGCAGCATTGAGAAGGACATCCAGTATTTTGTGAACCAGCGGAAAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS-3UTR CAA 90 bp | CTAGATACAAACAAGAGTGTACTTTACAATCCAGGGCCTCACAGATTAAGATCTTGTGCGTTCCTTTGCTaGTGGGCAGCATCCATTATT | + |
|
Preference number: 5 (lower is better) Translates to: LDTNKSVLYNPGPHRLRSCAFLC*WAASII Trigger: AATAATGGATGCTGCCCACAAGCAAAGGAACGCACA...AGATCTTAATCTGTGAGGCCCTGGATTGTAAAGTACACTCTTGTTTGTATCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
||
| CDS-3UTR CAA 90 bp | CAGGAAACAACACTCACAACCTTAGTAGCTAGCCAGAAAATAATAATTCTTCCTAGGTTCAGCAGGTCTTaGCCATATTTCTCTTCAATT | + |
|
Preference number: 5 (lower is better) Translates to: QETTLTTLVASQKIIILPRFSRS*PYFSSI Trigger: AATTGAAGAGAAATATGGCAAAGACCTGCTGAACCT...AGGAAGAATTATTATTTTCTGGCTAGCTACTAAGGTTGTGAGTGTTGTTTCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
||
| CDS GCA 72 bp | TGGTATCCGCTTAGGGACAGGGAGAGGTCCTCTCCTTaGTGGATTGGGCCCTGTAGTCTTTCCTGGTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WYPLRDRERSSP*WIGPCSLSWWG Trigger: GCCCCACCAGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCTCTCCCTGTCCCTAAGCGGATACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS CCA 72 bp | TATCCGCTTAGGGACAGGGAGAGGTCCTCTCCTTGCTaGATTGGGCCCTGTAGTCTTTCCTGGTGGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: YPLRDRERSSPC*IGPCSLSWWGS Trigger: GCTGCCCCACCAGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCTCTCCCTGTCCCTAAGCGGATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CAA 72 bp | CGCTTAGGGACAGGGAGAGGTCCTCTCCTTGCTGGATaGGGCCCTGTAGTCTTTCCTGGTGGGGCAGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: RLGTGRGPLLAG*GPVVFPGGAAF Trigger: GAATGCTGCCCCACCAGGAAAGACTACAGGGCCCAATCCAGCAAGGAGAGGACCTCTCCCTGTCCCTAAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS GCA 72 bp | GTTGGCCACATTGGCGCTGCGGTGGACAGCTTGCTCTaGCTCATCCTTGTCCCGGCACTTTTGCTCATAATT | + |
|
Preference number: 6 (lower is better) Translates to: VGHIGAAVDSLL*LILVPALLLII Trigger: AATTATGAGCAAAAGTGCCGGGACAAGGATGAGGCAGAGCAAGCTGTCCACCGCAGCGCCAATGTGGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 72 bp | CAAAAAGCTTTTCTTGTTGCCGTTGGTTGGCCACATTaGCGCTGCGGTGGACAGCTTGCTCTGCCTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: QKAFLVAVGWPH*RCGGQLALPHP Trigger: AGGATGAGGCAGAGCAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 72 bp | GTGGCCAGTTTCACAAAAAGCTTTTCTTGTTGCCGTTaGTTGGCCACATTGGCGCTGCGGTGGACAGCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VASFTKSFSCCR*LATLALRWTAC Trigger: GCAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTGTGAAACTGGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS CAA 72 bp | ACAAAAAGCTTTTCTTGTTGCCGTTGGTTGGCCACATaGGCGCTGCGGTGGACAGCTTGCTCTGCCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TKSFSCCRWLAT*ALRWTACSASS Trigger: GGATGAGGCAGAGCAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS GCA 72 bp | GCCTCGAACACCTCGCAGGCCTTAATGTGTTCACTCTaGCAGTCTTCTCGAACCTTCTCCAGCATGTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: ASNTSQALMCSL*QSSRTFSSMLM Trigger: CATCAACATGCTGGAGAAGGTTCGAGAAGACTGGCAGAGTGAACACATTAAGGCCTGCGAGGTGTTCGAGGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 72 bp | CCAGTTTCACAAAAAGCTTTTCTTGTTGCCGTTGGTTaGCCACATTGGCGCTGCGGTGGACAGCTTGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVSQKAFLVAVG*PHWRCGGQLAL Trigger: CAGAGCAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTGTGAAACTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CAA 72 bp | GCCAGTTTCACAAAAAGCTTTTCTTGTTGCCGTTGGTaGGCCACATTGGCGCTGCGGTGGACAGCTTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASFTKSFSCCRW*ATLALRWTACS Trigger: AGAGCAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTGTGAAACTGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CAA 72 bp | AGTGGCCAGTTTCACAAAAAGCTTTTCTTGTTGCCGTaGGTTGGCCACATTGGCGCTGCGGTGGACAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGQFHKKLFLLP*VGHIGAAVDSL Trigger: CAAGCTGTCCACCGCAGCGCCAATGTGGCCAACCAACGGCAACAAGAAAAGCTTTTTGTGAAACTGGCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS TCA 72 bp | AGTGCATTCCGGAAGAAGTTGATTCGTTCACATTCCTaGGCCTCGAACACCTCGCAGGCCTTAATGTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: SAFRKKLIRSHS*ASNTSQALMCS Trigger: TGAACACATTAAGGCCTGCGAGGTGTTCGAGGCTCAGGAATGTGAACGAATCAACTTCTTCCGGAATGCACT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CCA 72 bp | ACTGTAATCTTCAACCACAGAGTAATCAGGATCATCTaGTATCCGCTTAGGGACAGGGAGAGGTCCTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TVIFNHRVIRII*YPLRDRERSSP Trigger: AGGAGAGGACCTCTCCCTGTCCCTAAGCGGATACCAGATGATCCTGATTACTCTGTGGTTGAAGATTACAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS CAA 90 bp | TTCTTCTTGGCATCCATGGCTTTCTTGAACTGTGCGTTCCTTTGCTaGTGGGCAGCATCCATTATTGTTTCTGTCTTTTTCCGCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FFLASMAFLNCAFLC*WAASIIVSVFFRCS Trigger: GCTGCAGCGGAAAAAGACAGAAACAATAATGGATGCTGCCCACAAGCAAAGGAACGCACAGTTCAAGAAAGCCATGGATGCCAAGAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS TCA 72 bp | CACTCTGCCAGTCTTCTCGAACCTTCTCCAGCATGTTaGTGTGCAACATGTACGCTTTGTCTGAATCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: HSASLLEPSPAC*CATCTLCLNPL Trigger: TAGAGGATTCAGACAAAGCGTACATGTTGCACATCAACATGCTGGAGAAGGTTCGAGAAGACTGGCAGAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
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| CDS GCA 72 bp | TGCCAGTCTTCTCGAACCTTCTCCAGCATGTTGATGTaGAACATGTACGCTTTGTCTGAATCCTCTACTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQSSRTFSSMLM*NMYALSESSTA Trigger: TGCAGTAGAGGATTCAGACAAAGCGTACATGTTGCACATCAACATGCTGGAGAAGGTTCGAGAAGACTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS CAA 72 bp | ACCTTCTCCAGCATGTTGATGTGCAACATGTACGCTTaGTCTGAATCCTCTACTGCAGTCTTTGAAGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFSSMLMCNMYA*SESSTAVFEVA Trigger: GGCCACTTCAAAGACTGCAGTAGAGGATTCAGACAAAGCGTACATGTTGCACATCAACATGCTGGAGAAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS TCA 72 bp | TTTGCTCATAATTCTTCTTGGCATCCATGGCTTTCTTaGACTGTGCGTTCCTTTGCTTGTGGGCAGCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: FAHNSSWHPWLS*TVRSFACGQHP Trigger: TGGATGCTGCCCACAAGCAAAGGAACGCACAGTTCAAGAAAGCCATGGATGCCAAGAAGAATTATGAGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS TCA 72 bp | TACATCTCGTCATTTGCGACACATTGTTGTGACAGCTaGTTCAGATGCAACCACAGTGCATTCCGGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: YISSFATHCCDS*FRCNHSAFRKK Trigger: CTTCTTCCGGAATGCACTGTGGTTGCATCTGAATCAGCTGTCACAACAATGTGTCGCAAATGACGAGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS TCA 72 bp | TTGCTCATACATCTCGTCATTTGCGACACATTGTTGTaGCAGCTGATTCAGATGCAACCACAGTGCATTCCG | + |
|
Preference number: 6 (lower is better) Translates to: LLIHLVICDTLL*QLIQMQPQCIP Trigger: CGGAATGCACTGTGGTTGCATCTGAATCAGCTGTCACAACAATGTGTCGCAAATGACGAGATGTATGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS GCA 72 bp | TCCATTATTGTTTCTGTCTTTTTCCGCTGCAGCTTCTaGTTTTCCCGGAATTCTTCCATCTTCCTGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SIIVSVFFRCSF*FSRNSSIFLAS Trigger: AGAGGCCAGGAAGATGGAAGAATTCCGGGAAAAGCAGAAGCTGCAGCGGAAAAAGACAGAAACAATAATGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
||
| CDS CAA 72 bp | CCACACGGCTTCTTCCTGGAGAGGTTCAGCAGGTCTTaGCCATATTTCTCTTCAATTGATGCTCTTTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PHGFFLERFSRS*PYFSSIDALSF Trigger: GAAAGAAAGAGCATCAATTGAAGAGAAATATGGCAAAGACCTGCTGAACCTCTCCAGGAAGAAGCCGTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
||
| CDS CAA 72 bp | ACTGTGCGTTCCTTTGCTTGTGGGCAGCATCCATTATaGTTTCTGTCTTTTTCCGCTGCAGCTTCTGCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: TVRSFACGQHPL*FLSFSAAASAF Trigger: AAAAGCAGAAGCTGCAGCGGAAAAAGACAGAAACAATAATGGATGCTGCCCACAAGCAAAGGAACGCACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS CCA 72 bp | GGAGTCTGTCCAGTTTTCCGCTGGTTCACAAAATACTaGATGTCCTTCTCAATGCTGCATGTTTCTAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GVCPVFRWFTKY*MSFSMLHVSKL Trigger: GAGTTTAGAAACATGCAGCATTGAGAAGGACATCCAGTATTTTGTGAACCAGCGGAAAACTGGACAGACTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS CAA 90 bp | ATAATTCTTCTTGGCATCCATGGCTTTCTTGAACTGTGCGTTCCTTaGCTTGTGGGCAGCATCCATTATTGTTTCTGTCTTTTTCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: IILLGIHGFLELCVP*LVGSIHYCFCLFPL Trigger: CAGCGGAAAAAGACAGAAACAATAATGGATGCTGCCCACAAGCAAAGGAACGCACAGTTCAAGAAAGCCATGGATGCCAAGAAGAATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS CCA 72 bp | ACGCTTTGTCTGAATCCTCTACTGCAGTCTTTGAAGTaGCCAGTTTCACAAAAAGCTTTTCTTGTTGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: TLCLNPLLQSLK*PVSQKAFLVAV Trigger: AACGGCAACAAGAAAAGCTTTTTGTGAAACTGGCCACTTCAAAGACTGCAGTAGAGGATTCAGACAAAGCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS GCA 72 bp | GCTGGTTCACAAAATACTGGATGTCCTTCTCAATGCTaGATGTTTCTAAACTCTTACGGACTTGCTCATACA | + |
|
Preference number: 6 (lower is better) Translates to: AGSQNTGCPSQC*MFLNSYGLAHT Trigger: TGTATGAGCAAGTCCGTAAGAGTTTAGAAACATGCAGCATTGAGAAGGACATCCAGTATTTTGTGAACCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS GCA 72 bp | TTCTCAATGCTGCATGTTTCTAAACTCTTACGGACTTaGTCATACATCTCGTCATTTGCGACACATTGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: FSMLHVSKLLRT*SYISSFATHCC Trigger: ACAACAATGTGTCGCAAATGACGAGATGTATGAGCAAGTCCGTAAGAGTTTAGAAACATGCAGCATTGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114741.4 ENSMUST00000238172.2 |
||
| CDS CAA 72 bp | ATTGATGCTCTTTCTTTCAAAAAGTCTTCAAACTCCTaGCAGTTCTTACGGCCATTGTTCAGGTGCTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: IDALSFKKSSNS*QFLRPLFRCWI Trigger: TATCCAGCACCTGAACAATGGCCGTAAGAACTGCAAGGAGTTTGAAGACTTTTTGAAAGAAAGAGCATCAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114741.4 |
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