Pregenerated sensors for PSTPIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032322Ensembl transcript IDs: ENSMUST00000059206.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCATTCCCAGCACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTaGGCGGTGATGGAAAGAAACAGTCCTGACCTCACAGTCAGGGCG | + |
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Preference number: 1 (lower is better) Translates to: AHSQHHRAWFWPREA*AVMERNSPDLTVRA Trigger: CGCCCTGACTGTGAGGTCAGGACTGTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGAATGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| 3UTR CCA 90 bp | AGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTaGCCCCGTGAGGCCTGGGCGGTGATGGAAAGAAACAGTCCTGAC | + |
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Preference number: 1 (lower is better) Translates to: SSQHPAHSQHHRAWF*PREAWAVMERNSPD Trigger: GTCAGGACTGTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| 3UTR CCA 90 bp | ATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTaGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAAAGAAACAGT | + |
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Preference number: 1 (lower is better) Translates to: IESSQHPAHSQHHRA*FWPREAWAVMERNS Trigger: ACTGTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| 3UTR-3UTR CCA 90 bp | TACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCGGGCTTGGTTCTaGCCCCGTGAGGCCTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: YSFWETFIESSQHPAHSQHRAWF*PREAWA Trigger: CGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTG...CTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCTGGCCCCGTGAGGCCTaGGCGGTGATGGAAAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PSGRHLLRVASTQPIPSTWPREA*AVMERN Trigger: GTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCA...GGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| 3UTR-3UTR TCA 90 bp | TACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGGGAAAGAAACAGTCCTaGCCTCACAGTCAGGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: YSFWETFIESSQHPAHSQGKKQS*PHSQGG Trigger: TCCGCCCTGACTGTGAGGTCAGGACTGTTTCTTTCC...CTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| 3UTR CCA 72 bp | AGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTaGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAA | + |
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Preference number: 3 (lower is better) Translates to: SQHPAHSQHHRA*FWPREAWAVME Trigger: TTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TCCCAGCACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAACCTTGCACATCTTCCTaGCGTCCAGCAGCCTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SQHHRAWFWPREAWAVMEPCTSS*RPAASA Trigger: TGCAGAGGCTGCTGGACGGCAGGAAGATGTGCAAGG...TTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TCCCAGCACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAAGCTGGATGTGTGCACTaGCCACATTCTCTGTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: SQHHRAWFWPREAWAVMEAGCVH*PHSLFA Trigger: AGCAAACAGAGAATGTGGGCAGTGCACACATCCAGC...TTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | CACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAAAGAAACCACTGCATGGAGAGCTaGTTACAGTGCACCCACAGG | + |
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Preference number: 4 (lower is better) Translates to: HHRAWFWPREAWAVMERNHCMES*LQCTHR Trigger: CCTGTGGGTGCACTGTAACCAGCTCTCCATGCAGTG...GTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR TCA 90 bp | TTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCCCTGGGCCCTCTGTCTaGGCAGCTCCTCCACATCCT | + |
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Preference number: 4 (lower is better) Translates to: FIESSQHPAHSQHHRAWFPGPSV*AAPPHP Trigger: AGGATGTGGAGGAGCTGCTCAGACAGAGGGCCCAGG...GAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR TCA 90 bp | CACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAAAGAAACTCTGGACACGGTCCATaGTGGCCTCATACTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HHRAWFWPREAWAVMERNSGHGP*WPHTSS Trigger: GGAAGAAGTATGAGGCCATCATGGACCGTGTCCAGA...GTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR TCA 90 bp | TCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCCTCCCCTTCCAGGATaGCCGCCAGGATGTCTCCCG | + |
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Preference number: 4 (lower is better) Translates to: SFWETFIESSQHPAHSQHPPLPG*PPGCLP Trigger: CGGGAGACATCCTGGCGGTCATCCTGGAAGGGGAGG...GTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | CACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAAAGAAACGCATCCCTGCACTTCTaGTCATATGCCTTCTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: HHRAWFWPREAWAVMERNASLHF*SYAFLD Trigger: GTCCAAGAAGGCATATGACCAGAAGTGCAGGGATGC...GTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCACACCACAGGAGGGCTaGACGCTAGGGCTGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: FIESSQHPAHSQHHRAWFTPQEG*TLGLPI Trigger: GATTGGCAGCCCTAGCGTCCAGCCCTCCTGTGGTGT...GAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR TCA 90 bp | GAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTCATTGCGGAGGATGGTaGGCCGGTCAAACTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: ETFIESSQHPAHSQHHRAHCGGW*AGQTPA Trigger: TGCAGGAGTTTGACCGGCTCACCATCCTCCGCAATG...AGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTGCCTTGCGTGCAATCTaGACCAGCTCCTTCCCGTAC | + |
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Preference number: 4 (lower is better) Translates to: LLRVASTQPIPSTTGLGSALRAI*TSSFPY Trigger: GTACGGGAAGGAGCTGGTGCAGATTGCACGCAAGGC...AGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTTCTGGCCACCAGCCTTaGGTGCAATCTGCACCAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLRVASTQPIPSTTGLGSSGHQP*VQSAPA Trigger: AGCTGGTGCAGATTGCACGCAAGGCTGGTGGCCAGA...AGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | CCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCGCCACCAGCCTTGCGTaGAATCTGCACCAGCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: PSGRHLLRVASTQPIPSTATSLA*NLHQLL Trigger: AAGGAGCTGGTGCAGATTGCACGCAAGGCTGGTGGC...GGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | GAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTGGCCAGCTGGATGTGTaGACTGCCCACATTCTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ETFIESSQHPAHSQHHRAGQLDV*TAHILC Trigger: ACAGAGAATGTGGGCAGTGCACACATCCAGCTGGCC...AGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | GAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTAGCCGGTCAAACTCCTaGAACTGGAAGGCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: ETFIESSQHPAHSQHHRASRSNS*NWKASQ Trigger: CTGTGAGGCCTTCCAGTTGCAGGAGTTTGACCGGCT...AGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGAGAGCTGGTTACAGTaGACCCACAGGGCATTGCGG | + |
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Preference number: 4 (lower is better) Translates to: SGRHLLRVASTQPIPSTTESWLQ*THRALR Trigger: CCGCAATGCCCTGTGGGTGCACTGTAACCAGCTCTC...GGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | GAAACAGTCCTGACCTCACAGTCAGGGCGGAGGTATGTGGAGACTGCTAGCCTTGCTTCTGGTGGCCATTaGCACTCACACGCTCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ETVLTSQSGRRYVETASLASGGH*HSHARR Trigger: CCTTCGAGCGTGTGAGTGCCAATGGCCACCAGAAGC...AAGGCTAGCAGTCTCCACATACCTCCGCCCTGACTGTGAGGTCAGGACTGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCTCATACCCTGTGTaGGCCGTGAAGTCCCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TPSGRHLLRVASTQPIPSTSYPV*AVKSLH Trigger: GTGCAGGGACTTCACGGCCCACACAGGGTATGAGGT...GCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | ACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGGAATTCATCTCTGTCTaGCCACCAGCCTTGCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TFIESSQHPAHSQHHRAWEFISV*PPALRA Trigger: TGCACGCAAGGCTGGTGGCCAGACAGAGATGAATTC...CCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | TTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTTCTACTTGCTTCTGGTaGCCATTGGCACTCACACGC | + |
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Preference number: 4 (lower is better) Translates to: LLRVASTQPIPSTTGLGSSTCFW*PLALTR Trigger: GCGTGTGAGTGCCAATGGCCACCAGAAGCAAGTAGA...AGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | TACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGATAAGGCACCGGAGCTaGGGGCTCTCTGCCAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: YSFWETFIESSQHPAHSQIRHRS*GLSASA Trigger: AGCACTGGCAGAGAGCCCCCAGCTCCGGTGCCTTAT...CTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | GAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTGAGTCAGAGTCTCTGTaGAAGCAGCAGGAGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: ETFIESSQHPAHSQHHRAESESL*KQQEQK Trigger: CTTCTGCTCCTGCTGCTTCCACAGAGACTCTGACTC...AGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR TCA 90 bp | TTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTAGAGCTCATCATCCTTaGCACACTGCATGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LLRVASTQPIPSTTGLGSRAHHP*HTAWRA Trigger: AGCTCTCCATGCAGTGTGTCAAGGATGATGAGCTCT...AGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | GTGATGGAAAGAAACAGTCCTGACCTCACAGTCAGGGCGGAGGTATGTGGAGACGCTCCTCCACATCCTTaGACATCTTCCTGCCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VMERNSPDLTVRAEVCGDAPPHP*TSSCRP Trigger: TGGACGGCAGGAAGATGTGCAAGGATGTGGAGGAGC...GTCTCCACATACCTCCGCCCTGACTGTGAGGTCAGGACTGTTTCTTTCCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | GAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGTAGAGCGACAACTTaGTCTTCTGGACACGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: ETFIESSQHPAHSQHHRACRATT*SSGHGP Trigger: TGGACCGTGTCCAGAAGAGCAAGTTGTCGCTCTACA...AGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTCTGTGGCTGACTCCTTaGACTGCTTGGCTTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: LLRVASTQPIPSTTGLGSLWLTP*TAWLCS Trigger: AGAACAAAGCCAAGCAGTGCAAGGAGTCAGCCACAG...AGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | ACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTCATACTTCTTCCGCTaGTCTTTCTGTCTCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: TFIESSQHPAHSQHHRAWSYFFR*SFCLSR Trigger: CCGAGAGAGACAGAAAGAGCAGCGGAAGAAGTATGA...CCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACGCTGACTCCTTGCACTaGTTGGCTTTGTTCTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SFWETFIESSQHPAHSQHADSLH*LALFWL Trigger: GAGCCAGAACAAAGCCAAGCAGTGCAAGGAGTCAGC...GTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCGACAACTTGCTCTTCTaGACACGGTCCATGATGGCC | + |
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Preference number: 4 (lower is better) Translates to: TPSGRHLLRVASTQPIPSDNLLF*TRSMMA Trigger: GGCCATCATGGACCGTGTCCAGAAGAGCAAGTTGTC...GCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | TCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCAGAAGGTGTGGTCTTaGGACTTCCATGTAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SFWETFIESSQHPAHSQHQKVWS*DFHVAA Trigger: GGCTGCTACATGGAAGTCCCAAGACCACACCTTCTG...GTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | GAAACAGTCCTGACCTCACAGTCAGGGCGGAGGTATGTGGAGACTGCTAGCCTTCAGGAGCAGAAGGTGTaGTCTTGGGACTTCCATGTA | + |
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Preference number: 4 (lower is better) Translates to: ETVLTSQSGRRYVETASLQEQKV*SWDFHV Trigger: TACATGGAAGTCCCAAGACCACACCTTCTGCTCCTG...AAGGCTAGCAGTCTCCACATACCTCCGCCCTGACTGTGAGGTCAGGACTGTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCTGGCTCTTTTCTACTTaGTTCTGGTGGCCATTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SGRHLLRVASTQPIPSTTWLFST*FWWPLA Trigger: TGCCAATGGCCACCAGAAGCAAGTAGAAAAGAGCCA...GGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | TTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCGGTCATATGCCTTCTTaGACTCCATGGTCTTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FIESSQHPAHSQHHRAWFGHMPS*TPWSSC Trigger: ACAAGAAGACCATGGAGTCCAAGAAGGCATATGACC...GAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CCA 90 bp | ACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCCCTTCTTGGACTCCATaGTCTTCTTGTAGAGCGACA | + |
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Preference number: 4 (lower is better) Translates to: TPSGRHLLRVASTQPIPSPSWTP*SSCRAT Trigger: TGTCGCTCTACAAGAAGACCATGGAGTCCAAGAAGG...GCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGGCACTTCTGGTCATATaGCTTCTTGGACTCCATGGT | + |
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Preference number: 4 (lower is better) Translates to: YSFWETFIESSQHPAHSQALLVI*LLGLHG Trigger: ACCATGGAGTCCAAGAAGGCATATGACCAGAAGTGC...CTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCATCATCTGCATCCCTaGACTTCTGGTCATATGCCT | + |
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Preference number: 4 (lower is better) Translates to: YSFWETFIESSQHPAHSQHHLHP*TSGHMP Trigger: AGGCATATGACCAGAAGTGCAGGGATGCAGATGATG...CTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR GCA 90 bp | TTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCAGTTGTTCGATATTTTaGCTGTACACTCTTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: FIESSQHPAHSQHHRAWFSCSIF*LYTLSA Trigger: GGCAGAAAGAGTGTACAGGCAAAATATCGAACAACT...GAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | CACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAAAGAAACAGCTCCTCCACATCCTaGCACATCTTCCTGCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: HHRAWFWPREAWAVMERNSSSTS*HIFLPS Trigger: GGACGGCAGGAAGATGTGCAAGGATGTGGAGGAGCT...GTTTCTTTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGCACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAATCTGTGGCTGACTCCTaGCACTGCTTGGCTTTGTTC | + |
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Preference number: 5 (lower is better) Translates to: SQHHRAWFWPREAWAVMESVADS*HCLALF Trigger: GAACAAAGCCAAGCAGTGCAAGGAGTCAGCCACAGA...TTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 90 bp | TTCCTGCCGTCCAGCAGCCTCTGCAGTAGCACCTCATACCCTGTGTaGGCCGTGAAGTCCCTGCACCAGAAGGCATCTCGGAACTGCAGC | + |
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Preference number: 5 (lower is better) Translates to: FLPSSSLCSSTSYPV*AVKSLHQKASRNCS Trigger: GCTGCAGTTCCGAGATGCCTTCTGGTGCAGGGACTTCACGGCCCACACAGGGTATGAGGTGCTACTGCAGAGGCTGCTGGACGGCAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | GAAACAGTCCTGACCTCACAGTCAGGGCGGAGGTATGTGGAGACTGCTAGCCTTGTCTGGCCACCAGCCTaGCGTGCAATCTGCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: ETVLTSQSGRRYVETASLVWPPA*RAICTS Trigger: GCTGGTGCAGATTGCACGCAAGGCTGGTGGCCAGAC...AAGGCTAGCAGTCTCCACATACCTCCGCCCTGACTGTGAGGTCAGGACTGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | TCCCAGCACCACCGGGCTTGGTTCTGGCCCCGTGAGGCCTGGGCGGTGATGGAATTGCACTGCTTGGCTTaGTTCTGGCTCTTTTCTACT | + |
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Preference number: 5 (lower is better) Translates to: SQHHRAWFWPREAWAVMELHCLA*FWLFST Trigger: AGTAGAAAAGAGCCAGAACAAAGCCAAGCAGTGCAA...TTCCATCACCGCCCAGGCCTCACGGGGCCAGAACCAAGCCCGGTGGTGCTGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 90 bp | CTTTATCACACCACAGGAGGGCTGGACGCTAGGGCTGCCAATCAGTaGGGTCACCTCCCTGTCATAGTAGTTCTGATAAGGCACCGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LYHTTGGLDARAANQ*GHLPVIVVLIRHRS Trigger: GCTCCGGTGCCTTATCAGAACTACTATGACAGGGAGGTGACCCCACTGATTGGCAGCCCTAGCGTCCAGCCCTCCTGTGGTGTGATAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 90 bp | TCAAACTCCTGCAACTGGAAGGCCTCACAGGTAGTCCGGTGCTCCTaGTCCCACTCGGTCCTCGCTCTCTCCAGTTGTTCGATATTTTGC | + |
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Preference number: 5 (lower is better) Translates to: SNSCNWKASQVVRCS*SHSVLALSSCSIFC Trigger: GCAAAATATCGAACAACTGGAGAGAGCGAGGACCGAGTGGGAGCAGGAGCACCGGACTACCTGTGAGGCCTTCCAGTTGCAGGAGTTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCTGCTTCTGGTGGCCATaGGCACTCACACGCTCGAAG | + |
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Preference number: 5 (lower is better) Translates to: TPSGRHLLRVASTQPIPSCFWWP*ALTRSK Trigger: CTTCGAGCGTGTGAGTGCCAATGGCCACCAGAAGCA...GCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | TTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTTCTCTGCCAGTGCTCTaGGACTGGATGAAGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: LLRVASTQPIPSTTGLGSSLPVL*DWMKPL Trigger: CAATGGCTTCATCCAGTCCAAGAGCACTGGCAGAGA...AGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 90 bp | GCTTGGCTTTGTTCTGGCTCTTTTCTACTTGCTTCTGGTGGCCATTaGCACTCACACGCTCGAAGGCCTGCTCAGCATCATCTGCATCCC | + |
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Preference number: 5 (lower is better) Translates to: AWLCSGSFLLASGGH*HSHARRPAQHHLHP Trigger: GGGATGCAGATGATGCTGAGCAGGCCTTCGAGCGTGTGAGTGCCAATGGCCACCAGAAGCAAGTAGAAAAGAGCCAGAACAAAGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | CCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCGCCCACATTCTCTGTTaGCTGCTTCAGGGAGTCAAA | + |
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Preference number: 5 (lower is better) Translates to: PSGRHLLRVASTQPIPSTAHILC*LLQGVK Trigger: TTTGACTCCCTGAAGCAGCAAACAGAGAATGTGGGC...GGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCCTGGCTCTTTTCTACTaGCTTCTGGTGGCCATTGGC | + |
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Preference number: 5 (lower is better) Translates to: TPSGRHLLRVASTQPIPSLALFY*LLVAIG Trigger: GCCAATGGCCACCAGAAGCAAGTAGAAAAGAGCCAG...GCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | TTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCACCGGGCTTGGTTCTGACTGGATGAAGCCATaGATGTCACCTTCCACATCA | + |
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Preference number: 5 (lower is better) Translates to: LLRVASTQPIPSTTGLGSDWMKP*MSPSTS Trigger: TGATGTGGAAGGTGACATCAATGGCTTCATCCAGTC...AGAACCAAGCCCGGTGGTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | TCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACGACTCCTTGCACTGCTaGGCTTTGTTCTGGCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: SFWETFIESSQHPAHSQHDSLHC*ALFWLF Trigger: AAAGAGCCAGAACAAAGCCAAGCAGTGCAAGGAGTC...GTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 90 bp | TTTTGCCTGTACACTCTTTCTGCCTCTGTGGCTGACTCCTTGCACTaGTTGGCTTTGTTCTGGCTCTTTTCTACTTGCTTCTGGTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: FCLYTLSASVADSLH*LALFWLFSTCFWWP Trigger: TGGCCACCAGAAGCAAGTAGAAAAGAGCCAGAACAAAGCCAAGCAGTGCAAGGAGTCAGCCACAGAGGCAGAAAGAGTGTACAGGCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS-3UTR CAA 90 bp | TCCTTCTGGGAGACATTTATTGAGAGTAGCCAGCACCCAGCCCATTCCCAGCACCAGTTGTTCGATATTTaGCCTGTACACTCTTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: SFWETFIESSQHPAHSQHQLFDI*PVHSFC Trigger: GCAGAAAGAGTGTACAGGCAAAATATCGAACAACTG...GTGCTGGGAATGGGCTGGGTGCTGGCTACTCTCAATAAATGTCTCCCAGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 90 bp | CGATATTTTGCCTGTACACTCTTTCTGCCTCTGTGGCTGACTCCTTaGACTGCTTGGCTTTGTTCTGGCTCTTTTCTACTTGCTTCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RYFACTLFLPLWLTP*TAWLCSGSFLLASG Trigger: ACCAGAAGCAAGTAGAAAAGAGCCAGAACAAAGCCAAGCAGTGCAAGGAGTCAGCCACAGAGGCAGAAAGAGTGTACAGGCAAAATATCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 90 bp | TCTCCAGTTGTTCGATATTTTGCCTGTACACTCTTTCTGCCTCTGTaGCTGACTCCTTGCACTGCTTGGCTTTGTTCTGGCTCTTTTCTA | + |
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Preference number: 5 (lower is better) Translates to: SPVVRYFACTLFLPL*LTPCTAWLCSGSFL Trigger: TAGAAAAGAGCCAGAACAAAGCCAAGCAGTGCAAGGAGTCAGCCACAGAGGCAGAAAGAGTGTACAGGCAAAATATCGAACAACTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | AACTCCTGCAACTGGAAGGCCTCACAGGTAGTCCGGTaGTCCTGCTCCCACTCGGTCCTCGCTCTCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: NSCNWKASQVVR*SCSHSVLALSS Trigger: ACTGGAGAGAGCGAGGACCGAGTGGGAGCAGGAGCACCGGACTACCTGTGAGGCCTTCCAGTTGCAGGAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | AGGGCATTGCGGAGGATGGTGAGCCGGTCAAACTCCTaGAACTGGAAGGCCTCACAGGTAGTCCGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RALRRMVSRSNS*NWKASQVVRCS Trigger: GGAGCACCGGACTACCTGTGAGGCCTTCCAGTTGCAGGAGTTTGACCGGCTCACCATCCTCCGCAATGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS TCA 72 bp | GGTTACAGTGCACCCACAGGGCATTGCGGAGGATGGTaGGCCGGTCAAACTCCTGCAACTGGAAGGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GYSAPTGHCGGW*AGQTPATGRPH Trigger: GTGAGGCCTTCCAGTTGCAGGAGTTTGACCGGCTCACCATCCTCCGCAATGCCCTGTGGGTGCACTGTAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 72 bp | GAGCTTCTCCAAGTACGACCCAGGGACAAAGCCACGTaGTCCGTTCCGCTCCACAGTCCACCAGCCATCCTC | + |
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Preference number: 6 (lower is better) Translates to: ELLQVRPRDKAT*SVPLHSPPAIL Trigger: GAGGATGGCTGGTGGACTGTGGAGCGGAACGGACAACGTGGCTTTGTCCCTGGGTCGTACTTGGAGAAGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 90 bp | GGAGCTGGGGGCTCTCTGCCAGTGCTCTTGGACTGGATGAAGCCATaGATGTCACCTTCCACATCACAGCCCTCAAGGGTCAGCCGCACT | + |
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Preference number: 6 (lower is better) Translates to: GAGGSLPVLLDWMKP*MSPSTSQPSRVSRT Trigger: AGTGCGGCTGACCCTTGAGGGCTGTGATGTGGAAGGTGACATCAATGGCTTCATCCAGTCCAAGAGCACTGGCAGAGAGCCCCCAGCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 90 bp | TTGACACACTGCATGGAGAGCTGGTTACAGTGCACCCACAGGGCATaGCGGAGGATGGTGAGCCGGTCAAACTCCTGCAACTGGAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LTHCMESWLQCTHRA*RRMVSRSNSCNWKA Trigger: GGCCTTCCAGTTGCAGGAGTTTGACCGGCTCACCATCCTCCGCAATGCCCTGTGGGTGCACTGTAACCAGCTCTCCATGCAGTGTGTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | ACATCCTTGCACATCTTCCTGCCGTCCAGCAGCCTCTaGAGTAGCACCTCATACCCTGTGTGGGCCGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: TSLHIFLPSSSL*SSTSYPVWAVK Trigger: CTTCACGGCCCACACAGGGTATGAGGTGCTACTGCAGAGGCTGCTGGACGGCAGGAAGATGTGCAAGGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | TCATCCTTGACACACTGCATGGAGAGCTGGTTACAGTaGACCCACAGGGCATTGCGGAGGATGGTGAGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSLTHCMESWLQ*THRALRRMVSR Trigger: CCGGCTCACCATCCTCCGCAATGCCCTGTGGGTGCACTGTAACCAGCTCTCCATGCAGTGTGTCAAGGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | GTTAAGGTTTCCCTGGGTCGCCTGCACTTCGATGGATaGGTAGACCAACTCATTCCGCTCAGGGGTGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: VKVSLGRLHFDG*VDQLIPLRGGS Trigger: ACTCCCACCCCTGAGCGGAATGAGTTGGTCTACGCATCCATCGAAGTGCAGGCGACCCAGGGAAACCTTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS TCA 72 bp | GGGTCAGCCGCACTTCCTCATAGAGCTCATCATCCTTaGCACACTGCATGGAGAGCTGGTTACAGTGCACCC | + |
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Preference number: 6 (lower is better) Translates to: GSAALPHRAHHP*HTAWRAGYSAP Trigger: GGGTGCACTGTAACCAGCTCTCCATGCAGTGTGTCAAGGATGATGAGCTCTATGAGGAAGTGCGGCTGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | TGGACACGGTCCATGATGGCCTCATACTTCTTCCGCTaGTCTTTCTGTCTCTCTCGGAACTCCTCCAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: WTRSMMASYFFR*SFCLSRNSSRL Trigger: GAGCCTGGAGGAGTTCCGAGAGAGACAGAAAGAGCAGCGGAAGAAGTATGAGGCCATCATGGACCGTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | GGCACTCACACGCTCGAAGGCCTGCTCAGCATCATCTaGATCCCTGCACTTCTGGTCATATGCCTTCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: GTHTLEGLLSII*IPALLVICLLG Trigger: TCCAAGAAGGCATATGACCAGAAGTGCAGGGATGCAGATGATGCTGAGCAGGCCTTCGAGCGTGTGAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 72 bp | GGCTCTCTGCCAGTGCTCTTGGACTGGATGAAGCCATaGATGTCACCTTCCACATCACAGCCCTCAAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: GSLPVLLDWMKP*MSPSTSQPSRV Trigger: GACCCTTGAGGGCTGTGATGTGGAAGGTGACATCAATGGCTTCATCCAGTCCAAGAGCACTGGCAGAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 72 bp | TGCTTGGCTTTGTTCTGGCTCTTTTCTACTTGCTTCTaGTGGCCATTGGCACTCACACGCTCGAAGGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CLALFWLFSTCF*WPLALTRSKAC Trigger: GCAGGCCTTCGAGCGTGTGAGTGCCAATGGCCACCAGAAGCAAGTAGAAAAGAGCCAGAACAAAGCCAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 90 bp | TGCTTGGCTTTGTTCTGGCTCTTTTCTACTTGCTTCTGGTGGCCATaGGCACTCACACGCTCGAAGGCCTGCTCAGCATCATCTGCATCC | + |
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Preference number: 6 (lower is better) Translates to: CLALFWLFSTCFWWP*ALTRSKACSASSAS Trigger: GGATGCAGATGATGCTGAGCAGGCCTTCGAGCGTGTGAGTGCCAATGGCCACCAGAAGCAAGTAGAAAAGAGCCAGAACAAAGCCAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS GCA 72 bp | CACTCGGTCCTCGCTCTCTCCAGTTGTTCGATATTTTaGCTGTACACTCTTTCTGCCTCTGTGGCTGACTCC | + |
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Preference number: 6 (lower is better) Translates to: HSVLALSSCSIF*LYTLSASVADS Trigger: GGAGTCAGCCACAGAGGCAGAAAGAGTGTACAGGCAAAATATCGAACAACTGGAGAGAGCGAGGACCGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 72 bp | TGTTCTGGCTCTTTTCTACTTGCTTCTGGTGGCCATTaGCACTCACACGCTCGAAGGCCTGCTCAGCATCAT | + |
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Preference number: 6 (lower is better) Translates to: CSGSFLLASGGH*HSHARRPAQHH Trigger: ATGATGCTGAGCAGGCCTTCGAGCGTGTGAGTGCCAATGGCCACCAGAAGCAAGTAGAAAAGAGCCAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 72 bp | TCTCTGTGGAAGCAGCAGGAGCAGAAGGTGTGGTCTTaGGACTTCCATGTAGCAGCCCAGAGAACCTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: SLWKQQEQKVWS*DFHVAAQRTSL Trigger: TAAAGAGGTTCTCTGGGCTGCTACATGGAAGTCCCAAGACCACACCTTCTGCTCCTGCTGCTTCCACAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 72 bp | TTGTTCTGGCTCTTTTCTACTTGCTTCTGGTGGCCATaGGCACTCACACGCTCGAAGGCCTGCTCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LFWLFSTCFWWP*ALTRSKACSAS Trigger: TGATGCTGAGCAGGCCTTCGAGCGTGTGAGTGCCAATGGCCACCAGAAGCAAGTAGAAAAGAGCCAGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS TCA 72 bp | TGTAGAGCGACAACTTGCTCTTCTGGACACGGTCCATaGTGGCCTCATACTTCTTCCGCTGCTCTTTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: CRATTCSSGHGP*WPHTSSAALSV Trigger: GACAGAAAGAGCAGCGGAAGAAGTATGAGGCCATCATGGACCGTGTCCAGAAGAGCAAGTTGTCGCTCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 72 bp | AAGGCCTGCTCAGCATCATCTGCATCCCTGCACTTCTaGTCATATGCCTTCTTGGACTCCATGGTCTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KACSASSASLHF*SYAFLDSMVFL Trigger: CAAGAAGACCATGGAGTCCAAGAAGGCATATGACCAGAAGTGCAGGGATGCAGATGATGCTGAGCAGGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CCA 72 bp | CATCTGCATCCCTGCACTTCTGGTCATATGCCTTCTTaGACTCCATGGTCTTCTTGTAGAGCGACAACTTGC | + |
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Preference number: 6 (lower is better) Translates to: HLHPCTSGHMPS*TPWSSCRATTC Trigger: GCAAGTTGTCGCTCTACAAGAAGACCATGGAGTCCAAGAAGGCATATGACCAGAAGTGCAGGGATGCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 72 bp | TGCCTGTACACTCTTTCTGCCTCTGTGGCTGACTCCTaGCACTGCTTGGCTTTGTTCTGGCTCTTTTCTACT | + |
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Preference number: 6 (lower is better) Translates to: CLYTLSASVADS*HCLALFWLFST Trigger: AGTAGAAAAGAGCCAGAACAAAGCCAAGCAGTGCAAGGAGTCAGCCACAGAGGCAGAAAGAGTGTACAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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| CDS CAA 90 bp | TCGATATTTTGCCTGTACACTCTTTCTGCCTCTGTGGCTGACTCCTaGCACTGCTTGGCTTTGTTCTGGCTCTTTTCTACTTGCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SIFCLYTLSASVADS*HCLALFWLFSTCFW Trigger: CCAGAAGCAAGTAGAAAAGAGCCAGAACAAAGCCAAGCAGTGCAAGGAGTCAGCCACAGAGGCAGAAAGAGTGTACAGGCAAAATATCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059206.8 |
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