Pregenerated sensors for PSRC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068744Ensembl transcript IDs: ENSMUST00000090561.10, ENSMUST00000102629.8, ENSMUST00000128089.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCCTCCCATCTCTGGGCACAGAGCTACTGGAGTTAGGGACCACTaGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: LPPISGHRATGVRDH*QRRVQTLMAKMVVA Trigger: AGCCACTACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCCAGTAGCTCTGTGCCCAGAGATGGGAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGGGCTCCTAAGGCCGCTCATATGGGAATGGCCAGTGAACCGTGGTAGAAGATTCTCCACGGGCAGATaGCCTCTGCCCCTCTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GGLLRPLIWEWPVNRGRRFSTGR*PLPLSS Trigger: AGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAA...TCTTCTACCACGGTTCACTGGCCATTCCCATATGAGCGGCCTTAGGAGCCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCTCTACTTCAGAGGTCAGCCCTGGAGGCATCTCTTCCTCCCATCTCTGGGCGGAGTTAGGGACCACTaGCAGAGGAGAGTCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: SLYFRGQPWRHLFLPSLGGVRDH*QRRVQT Trigger: AGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCC...GCCCAGAGATGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAAGTAGAGACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTCAGGGCAGGGTTCTTCCTCCCATCTCTaGGCACAGAGCTACTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: VSPRADDLCPSLLLSGQGSSSHL*AQSYWS Trigger: ACTCCAGTAGCTCTGTGCCCAGAGATGGGAGGAAGA...ACCCTGCCCTGAAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CCA 90 bp | GTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAGGAAGGGAGTTAGGGACCACTaGCAGAGGAGAGTCCAGACT | + |
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Preference number: 2 (lower is better) Translates to: VHQLSSWPFQTDQYPVRKGVRDH*QRRVQT Trigger: AGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCC...CTTCCTGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CCA 90 bp | GTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAGGAAGTTCAGAGGTCAGCCCTaGAGGCATCTCTTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: VHQLSSWPFQTDQYPVRKFRGQP*RHLFLP Trigger: TGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAA...CTTCCTGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCACGGGCAGATGACCTCTaGCCCTCTCTTCTTCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: VLYISCPPGLSKQTSIQSRADDL*PSLLLS Trigger: TGAAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCG...TGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTTTCAGAGGTCAGCCCTaGAGGCATCTCTTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RKQVLYISCPPGLSKQTSFRGQP*RHLFLP Trigger: TGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAA...ACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CCA 90 bp | AGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTGTCCTGACCACAAGATaGAAGGAGACAGATAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: RKQVLYISCPPGLSKQTSVLTTR*KETDRS Trigger: TGACCTATCTGTCTCCTTCCATCTTGTGGTCAGGAC...ACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCAAACAGACCAGTATCCAGTCAGGAAGACATGTCATAGAGAACTGAGCCGGGTCCTGACCACAAGATaGAAGGAGACAGATAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: FQTDQYPVRKTCHRELSRVLTTR*KETDRS Trigger: TGACCTATCTGTCTCCTTCCATCTTGTGGTCAGGAC...CCGGCTCAGTTCTCTATGACATGTCTTCCTGACTGGATACTGGTCTGTTTGGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCAAACAGACCAGTATCCAGTCAGGAAGACATGTCATAGAGAACTGAGCCGGTTATTATTTTGTTTGTaGGTTTCTCCACGGGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: FQTDQYPVRKTCHRELSRLLFCL*VSPRAD Trigger: ATCTGCCCGTGGAGAAACTCACAAACAAAATAATAA...CCGGCTCAGTTCTCTATGACATGTCTTCCTGACTGGATACTGGTCTGTTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR CCA 72 bp | CCGATCCCCCATAGTCTCTACTTCAGAGGTCAGCCCTaGAGGCATCTCTTCCTCCCATCTCTGGGCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: PIPHSLYFRGQP*RHLFLPSLGTE Trigger: CTCTGTGCCCAGAGATGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAAGTAGAGACTATGGGGGATCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CAA 90 bp | GCTCAAGGCACCCGATCCCCCATAGTCTCTACTTCAGAGGTCAGCCCTGGAGGCAGGAGAGTCCAGACTTaGATGGCTAAGATGGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: AQGTRSPIVSTSEVSPGGRRVQT*MAKMVV Trigger: CACTACCATCTTAGCCATCAAAGTCTGGACTCTCCT...GCCTCCAGGGCTGACCTCTGAAGTAGAGACTATGGGGGATCGGGTGCCTTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR CCA 72 bp | ATCTCTGGGCACAGAGCTACTGGAGTTAGGGACCACTaGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATG | + |
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Preference number: 3 (lower is better) Translates to: ISGHRATGVRDH*QRRVQTLMAKM Trigger: CATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCCAGTAGCTCTGTGCCCAGAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CAA 90 bp | AGTCTCTACTTCAGAGGTCAGCCCTGGAGGCATCTCTTCCTCCCATCTCTGGGCCTTGCTATTGAGTCTTaGTTTGCTGACGTGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: SLYFRGQPWRHLFLPSLGLAIES*FADVLF Trigger: GAAGAGCACGTCAGCAAACAAAGACTCAATAGCAAG...GCCCAGAGATGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAAGTAGAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGTTTGTGAGTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTGGTAGTGGCTTGCTATaGAGTCTTTGTTTGCTGACG | + |
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Preference number: 3 (lower is better) Translates to: FVCEFLHGQMTSAPLFFFGSGLL*SLCLLT Trigger: CGTCAGCAAACAAAGACTCAATAGCAAGCCACTACC...AAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR TCA 72 bp | TTTATTATTTTGTTTGTGAGTTTCTCCACGGGCAGATaGCCTCTGCCCCTCTCTTCTTCTTTCAGGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: FIILFVSFSTGR*PLPLSSSFRAG Trigger: CCCTGCCCTGAAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAAAATAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR CCA 72 bp | GGTAGAAGATCAAGCTCTCTAGTCCTGACCACAAGATaGAAGGAGACAGATAGGTCACTCTGCCTGCATTTA | + |
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Preference number: 3 (lower is better) Translates to: GRRSSSLVLTTR*KETDRSLCLHL Trigger: TAAATGCAGGCAGAGTGACCTATCTGTCTCCTTCCATCTTGTGGTCAGGACTAGAGAGCTTGATCTTCTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| 3UTR-3UTR CAA 90 bp | GAATTCATAGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGGAGAGTCCAGACTTaGATGGCTAAGATGGTAGTG | + |
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Preference number: 3 (lower is better) Translates to: EFIGNKFCTSAVLLAFPNRRVQT*MAKMVV Trigger: CACTACCATCTTAGCCATCAAAGTCTGGACTCTCCT...GTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCTATGAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GGCGGGCTCCTAAGGCCGCTCATATGGGAATGGCCAGTGAACCGTGGTAGAAGAGACTGGGTTTCCCTCTaGGGCTGGGCCTTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: GGLLRPLIWEWPVNRGRRDWVSL*GWAFQG Trigger: GCCCTGGAAGGCCCAGCCCCAGAGGGAAACCCAGTC...TCTTCTACCACGGTTCACTGGCCATTCCCATATGAGCGGCCTTAGGAGCCCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTCAGGGCAGGGTTCTCCCGCCGAGGACTaGGTTTCCCTCTGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VSPRADDLCPSLLLSGQGSPAED*VSLWGW Trigger: CCAGCCCCAGAGGGAAACCCAGTCCTCGGCGGGAGA...ACCCTGCCCTGAAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR GCA 90 bp | AGTCTCTACTTCAGAGGTCAGCCCTGGAGGCATCTCTTCCTCCCATCTCTGGGCAGTCGGTCCAGGGACTaGAGCTTTCCTGAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLYFRGQPWRHLFLPSLGSRSRD*SFPEGL Trigger: CAGCCCCTCAGGAAAGCTGCAGTCCCTGGACCGACT...GCCCAGAGATGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAAGTAGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GCTCAAGGCACCCGATCCCCCATAGTCTCTACTTCAGAGGTCAGCCCTGGAGGCTTGACAGCTGCTCCCTaGAGCCGGGATGAACATTGG | + |
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Preference number: 4 (lower is better) Translates to: AQGTRSPIVSTSEVSPGGLTAAP*SRDEHW Trigger: CCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAA...GCCTCCAGGGCTGACCTCTGAAGTAGAGACTATGGGGGATCGGGTGCCTTGAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR GCA 90 bp | GGCGGGCTCCTAAGGCCGCTCATATGGGAATGGCCAGTGAACCGTGGTAGAAGAACCCCTTTTTATCACTaGTCCGGAGCCCAGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGLLRPLIWEWPVNRGRRTPFYH*SGAQLG Trigger: GCCTAGCTGGGCTCCGGAGCAGTGATAAAAAGGGGT...TCTTCTACCACGGTTCACTGGCCATTCCCATATGAGCGGCCTTAGGAGCCCGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GCTCAAGGCACCCGATCCCCCATAGTCTCTACTTCAGAGGTCAGCCCTGGAGGCCTCATGACTGTCAGATaGAGACAGCCCTCCGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: AQGTRSPIVSTSEVSPGGLMTVR*RQPSEV Trigger: GACTTCGGAGGGCTGTCTCCATCTGACAGTCATGAG...GCCTCCAGGGCTGACCTCTGAAGTAGAGACTATGGGGGATCGGGTGCCTTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR TCA 90 bp | GGCGGGCTCCTAAGGCCGCTCATATGGGAATGGCCAGTGAACCGTGGTAGAAGAACTGTGGAACTGGTCTaGCAGGAATTGGTGGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GGLLRPLIWEWPVNRGRRTVELV*QELVGL Trigger: CAAGCCCACCAATTCCTGTCAGACCAGTTCCACAGT...TCTTCTACCACGGTTCACTGGCCATTCCCATATGAGCGGCCTTAGGAGCCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR GCA 90 bp | GGCGGGCTCCTAAGGCCGCTCATATGGGAATGGCCAGTGAACCGTGGTAGAAGACCCCGGGCTTTTGGATaGAGGGAACAGATTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: GGLLRPLIWEWPVNRGRRPRAFG*REQIAS Trigger: ACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGG...TCTTCTACCACGGTTCACTGGCCATTCCCATATGAGCGGCCTTAGGAGCCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR TCA 90 bp | GGAGTTAGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAAGGCTTGGGGATGGCTaGAGGGACAGGGAGTCGACT | + |
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Preference number: 4 (lower is better) Translates to: GVRDHWQRRVQTLMAKMVRLGDG*RDREST Trigger: AGTCGACTCCCTGTCCCTTCAGCCATCCCCAAGCCT...TACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | AGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTGACTGGGTTTCCCTCTaGGGCTGGGCCTTCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RKQVLYISCPPGLSKQTSDWVSL*GWAFQG Trigger: GCCCTGGAAGGCCCAGCCCCAGAGGGAAACCCAGTC...ACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | TTTGTTTGTGAGTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTTCTCCCGCCGAGGACTaGGTTTCCCTCTGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: FVCEFLHGQMTSAPLFFFSPAED*VSLWGW Trigger: CCAGCCCCAGAGGGAAACCCAGTCCTCGGCGGGAGA...AAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTCAGGGCAGGGTCCGAGGTGGAAGAATTaGTTGTGCAAGAGGAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: VSPRADDLCPSLLLSGQGPRWKN*LCKRRA Trigger: CGCTCTCCTCTTGCACAACCAATTCTTCCACCTCGG...ACCCTGCCCTGAAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GGAGTTAGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTATGGCAGGCTTGGGGATaGCTGAAGGGACAGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: GVRDHWQRRVQTLMAKMVWQAWG*LKGQGV Trigger: GACTCCCTGTCCCTTCAGCCATCCCCAAGCCTGCCA...TACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAGGAAGTGGCAGGCTTGGGGATaGCTGAAGGGACAGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: VHQLSSWPFQTDQYPVRKWQAWG*LKGQGV Trigger: GACTCCCTGTCCCTTCAGCCATCCCCAAGCCTGCCA...CTTCCTGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCACTCGGGTGGCAGGCTTaGGGATGGCTGAAGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: VLYISCPPGLSKQTSIQSLGWQA*GWLKGQ Trigger: CTGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAG...TGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR GCA 90 bp | AGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAGTGGCTACCCCTTTTTATCACTaGTCCGGAGCCCAGCTAGGC | + |
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Preference number: 4 (lower is better) Translates to: RDHWQRRVQTLMAKMVVATPFYH*SGAQLG Trigger: GCCTAGCTGGGCTCCGGAGCAGTGATAAAAAGGGGT...AGCCACTACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR GCA 90 bp | GTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAAGTCGGTCCAGGGACTaGAGCTTTCCTGAGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLYISCPPGLSKQTSIQSSRSRD*SFPEGL Trigger: CAGCCCCTCAGGAAAGCTGCAGTCCCTGGACCGACT...TGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | TTCCAAACAGACCAGTATCCAGTCAGGAAGACATGTCATAGAGAACTGAGCCGGGTTTCCCTCTGGGGCTaGGCCTTCCAGGGCCTGTAC | + |
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Preference number: 4 (lower is better) Translates to: FQTDQYPVRKTCHRELSRVSLWG*AFQGLY Trigger: GTACAGGCCCTGGAAGGCCCAGCCCCAGAGGGAAAC...CCGGCTCAGTTCTCTATGACATGTCTTCCTGACTGGATACTGGTCTGTTTGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAGGAAGCCACCCGGACAGCCCTaGCTGACCCCTTTTTATCAC | + |
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Preference number: 4 (lower is better) Translates to: VHQLSSWPFQTDQYPVRKPPGQP*LTPFYH Trigger: GTGATAAAAAGGGGTCAGCCAGGGCTGTCCGGGTGG...CTTCCTGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | TTTGTTTGTGAGTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTCTCGGGTGGCAGGCTTaGGGATGGCTGAAGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: FVCEFLHGQMTSAPLFFFLGWQA*GWLKGQ Trigger: CTGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAG...AAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTCAGGGCAGGGTCTCGAGCCGCACTGGTaGTTGGAAGGTTTGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: VSPRADDLCPSLLLSGQGLEPHW*LEGLFS Trigger: AGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAG...ACCCTGCCCTGAAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR TCA 90 bp | AGTCTCTACTTCAGAGGTCAGCCCTGGAGGCATCTCTTCCTCCCATCTCTGGGCATGTCTTCTTCCTCATaGCTGTCAGATGGAGACAGC | + |
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Preference number: 4 (lower is better) Translates to: SLYFRGQPWRHLFLPSLGMSSSS*LSDGDS Trigger: GCTGTCTCCATCTGACAGTCATGAGGAAGAAGACAT...GCCCAGAGATGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAAGTAGAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR GCA 90 bp | AGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAGTGGCTCCCCGGGCTTTTGGATaGAGGGAACAGATTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: RDHWQRRVQTLMAKMVVAPRAFG*REQIAS Trigger: ACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGG...AGCCACTACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCATTTGGGTTACTCCGATaGGCGAGGCCCCGTCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: VLYISCPPGLSKQTSIQSFGLLR*ARPRRS Trigger: ACTTCGACGGGGCCTCGCCCATCGGAGTAACCCAAA...TGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAAGCGCCCCGGGCTTTTaGATGCAGGGAACAGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLYISCPPGLSKQTSIQSSAPGF*MQGTDC Trigger: GCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCT...TGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAGGAAGTTGACAGCTGCTCCCTaGAGCCGGGATGAACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHQLSSWPFQTDQYPVRKLTAAP*SRDEHW Trigger: CCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAA...CTTCCTGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | AGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTTTTGGGTTACTCCGATaGGCGAGGCCCCGTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RKQVLYISCPPGLSKQTSFGLLR*ARPRRS Trigger: ACTTCGACGGGGCCTCGCCCATCGGAGTAACCCAAA...ACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | TTCCAAACAGACCAGTATCCAGTCAGGAAGACATGTCATAGAGAACTGAGCCGGCCACCCGGACAGCCCTaGCTGACCCCTTTTTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: FQTDQYPVRKTCHRELSRPPGQP*LTPFYH Trigger: GTGATAAAAAGGGGTCAGCCAGGGCTGTCCGGGTGG...CCGGCTCAGTTCTCTATGACATGTCTTCCTGACTGGATACTGGTCTGTTTGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | AGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTAGCGCCCCGGGCTTTTaGATGCAGGGAACAGATTGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQVLYISCPPGLSKQTSSAPGF*MQGTDC Trigger: GCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCT...ACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GGAGTTAGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAAGCCGCACTGGTGGTTaGAAGGTTTGTTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVRDHWQRRVQTLMAKMVSRTGG*KVCFLG Trigger: TCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCT...TACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAGGAAGAGCCGCACTGGTGGTTaGAAGGTTTGTTTTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHQLSSWPFQTDQYPVRKSRTGG*KVCFLG Trigger: TCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCT...CTTCCTGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR TCA 90 bp | TTTGTTTGTGAGTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTACTGTGGAACTGGTCTaGCAGGAATTGGTGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVCEFLHGQMTSAPLFFFTVELV*QELVGL Trigger: CAAGCCCACCAATTCCTGTCAGACCAGTTCCACAGT...AAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | AGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTCCGAGGTGGAAGAATTaGTTGTGCAAGAGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: RKQVLYISCPPGLSKQTSPRWKN*LCKRRA Trigger: CGCTCTCCTCTTGCACAACCAATTCTTCCACCTCGG...ACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GGAGTTAGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAGGAAGGTTTGTTTTCTaGGAAACAGAGGCTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GVRDHWQRRVQTLMAKMVGRFVF*ETEALC Trigger: GCACAGAGCCTCTGTTTCCCAGAAAACAAACCTTCC...TACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR GCA 90 bp | GAATTCATAGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACTGGAAGAATTGGTTGTaGAAGAGGAGAGCGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EFIGNKFCTSAVLLAFPNWKNWL*KRRAPR Trigger: CCGGGGCGCTCTCCTCTTGCACAACCAATTCTTCCA...GTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCTATGAATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAGGAAGGTTTGTTTTCTaGGAAACAGAGGCTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLYISCPPGLSKQTSIQSGRFVF*ETEALC Trigger: GCACAGAGCCTCTGTTTCCCAGAAAACAAACCTTCC...TGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GAATTCATAGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACCTCATGACTGTCAGATaGAGACAGCCCTCCGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: EFIGNKFCTSAVLLAFPNLMTVR*RQPSEV Trigger: GACTTCGGAGGGCTGTCTCCATCTGACAGTCATGAG...GTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCTATGAATTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | GAATTCATAGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACCTCGAGCCGCACTGGTaGTTGGAAGGTTTGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFIGNKFCTSAVLLAFPNLEPHW*LEGLFS Trigger: AGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAG...GTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCTATGAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR TCA 90 bp | GAATTCATAGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACATGTCTTCTTCCTCATaGCTGTCAGATGGAGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: EFIGNKFCTSAVLLAFPNMSSSS*LSDGDS Trigger: GCTGTCTCCATCTGACAGTCATGAGGAAGAAGACAT...GTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCTATGAATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CCA 90 bp | TTTGTTTGTGAGTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTGGAACAGATTGCAAGTaGGTGATTCCTTCTTTATGC | + |
|
Preference number: 4 (lower is better) Translates to: FVCEFLHGQMTSAPLFFFGTDCK*VIPSLC Trigger: GCATAAAGAAGGAATCACCCACTTGCAATCTGTTCC...AAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | AGCCGCCAGGCGGTTGGCTTCATCAAGAATCTCTTCCAGCTTCTCTaGGCTGAGCGGGCCCAAGCTAAACCGCACACCCTGGAGGGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRQAVGFIKNLFQLL*AERAQAKPHTLEGG Trigger: CCCGCCCTCCAGGGTGTGCGGTTTAGCTTGGGCCCGCTCAGCCCAGAGAAGCTGGAAGAGATTCTTGATGAAGCCAACCGCCTGGCGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS TCA 90 bp | ACTCCGCCCAATGAGTGGCACTCGGGTGGCAGGCTTGGGGATGGCTaGAGGGACAGGGAGTCGACTGGAAGACTTGACAGCTGCTCCCTG | + |
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Preference number: 5 (lower is better) Translates to: TPPNEWHSGGRLGDG*RDRESTGRLDSCSL Trigger: CAGGGAGCAGCTGTCAAGTCTTCCAGTCGACTCCCTGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAGTGCCACTCATTGGGCGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | TCCAGCTTCTCTGGGCTGAGCGGGCCCAAGCTAAACCGCACACCCTaGAGGGCGGGAGCTACTTCATTTGGGTTACTCCGATGGGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSFSGLSGPKLNRTP*RAGATSFGLLRWAR Trigger: CCTCGCCCATCGGAGTAACCCAAATGAAGTAGCTCCCGCCCTCCAGGGTGTGCGGTTTAGCTTGGGCCCGCTCAGCCCAGAGAAGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS-3UTR CAA 90 bp | GCTCAAGGCACCCGATCCCCCATAGTCTCTACTTCAGAGGTCAGCCCTGGAGGCACTCGGGTGGCAGGCTaGGGGATGGCTGAAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: AQGTRSPIVSTSEVSPGGTRVAG*GMAEGT Trigger: TGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAGT...GCCTCCAGGGCTGACCTCTGAAGTAGAGACTATGGGGGATCGGGTGCCTTGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | GCCCAAGCTAAACCGCACACCCTGGAGGGCGGGAGCTACTTCATTTaGGTTACTCCGATGGGCGAGGCCCCGTCGAAGTGGTTTCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQAKPHTLEGGSYFI*VTPMGEAPSKWFLW Trigger: CCAGAGAAACCACTTCGACGGGGCCTCGCCCATCGGAGTAACCCAAATGAAGTAGCTCCCGCCCTCCAGGGTGTGCGGTTTAGCTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CCA 90 bp | GCCCAGCTAGGCTGCTTGGAGGTGGGGTGCTCCAAGAACTCACGGTaGGCAGCAGATCTCGGACAGGGCTATCCTTCAGGACGAAGGTCT | + |
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Preference number: 5 (lower is better) Translates to: AQLGCLEVGCSKNSR*AADLGQGYPSGRRS Trigger: AGACCTTCGTCCTGAAGGATAGCCCTGTCCGAGATCTGCTGCCCACCGTGAGTTCTTGGAGCACCCCACCTCCAAGCAGCCTAGCTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CCA 90 bp | GCCTCGAGCGGCACTGGTGGTCCTGCCTCGAGCCGCACTGGTGGTTaGAAGGTTTGTTTTCTGGGAAACAGAGGCTCTGTGCCCTATGGC | + |
|
Preference number: 5 (lower is better) Translates to: ASSGTGGPASSRTGG*KVCFLGNRGSVPYG Trigger: GCCATAGGGCACAGAGCCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAGGCAGGACCACCAGTGCCGCTCGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCTACTTCAGAGGTCAGCCCTGGAGGCATCTCTTCCTCCCATCTCTGGGCGCCCAGCTAGGCTGCTaGGAGGTGGGGTGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLYFRGQPWRHLFLPSLGAQLGC*EVGCSK Trigger: CTTGGAGCACCCCACCTCCAAGCAGCCTAGCTGGGC...GCCCAGAGATGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAAGTAGAGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS TCA 90 bp | AATCTGGAGCTAGGGCACCTTTTCCAGGTGGTAGACTCCGCCCAATaGGTGGCACTCGGGTGGCAGGCTTGGGGATGGCTGAAGGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: NLELGHLFQVVDSAQ*VALGWQAWGWLKGQ Trigger: CTGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAGTGCCACTCATTGGGCGGAGTCTACCACCTGGAAAAGGTGCCCTAGCTCCAGATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 90 bp | TTTTATCACTGCTCCGGAGCCCAGCTAGGCTGCTTGGAGGTGGGGTaGTCCAAGAACTCACGGTGGGCAGCAGATCTCGGACAGGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FYHCSGAQLGCLEVG*SKNSRWAADLGQGY Trigger: ATAGCCCTGTCCGAGATCTGCTGCCCACCGTGAGTTCTTGGAGCACCCCACCTCCAAGCAGCCTAGCTGGGCTCCGGAGCAGTGATAAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS-3UTR CAA 90 bp | AGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAGTGGCTGCCCAGCTAGGCTGCTaGGAGGTGGGGTGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RDHWQRRVQTLMAKMVVAAQLGC*EVGCSK Trigger: CTTGGAGCACCCCACCTCCAAGCAGCCTAGCTGGGC...AGCCACTACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCTACTTCAGAGGTCAGCCCTGGAGGCATCTCTTCCTCCCATCTCTGGGCGAGCGCCCCGGGCTTTaGGATGCAGGGAACAGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SLYFRGQPWRHLFLPSLGERPGL*DAGNRL Trigger: CAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTC...GCCCAGAGATGGGAGGAAGAGATGCCTCCAGGGCTGACCTCTGAAGTAGAGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | GGCGGGCTCCTAAGGCCGCTCATATGGGAATGGCCAGTGAACCGTGGTAGAAGAAGTCGACTGGAAGACTaGACAGCTGCTCCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGLLRPLIWEWPVNRGRRSRLED*TAAPWS Trigger: GCTCCAGGGAGCAGCTGTCAAGTCTTCCAGTCGACT...TCTTCTACCACGGTTCACTGGCCATTCCCATATGAGCGGCCTTAGGAGCCCGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | CGCACACCCTGGAGGGCGGGAGCTACTTCATTTGGGTTACTCCGATaGGCGAGGCCCCGTCGAAGTGGTTTCTCTGGACTCACTAATACT | + |
|
Preference number: 5 (lower is better) Translates to: RTPWRAGATSFGLLR*ARPRRSGFSGLTNT Trigger: AGTATTAGTGAGTCCAGAGAAACCACTTCGACGGGGCCTCGCCCATCGGAGTAACCCAAATGAAGTAGCTCCCGCCCTCCAGGGTGTGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CCA 90 bp | GCTGAAGGGACAGGGAGTCGACTGGAAGACTTGACAGCTGCTCCCTaGAGCCGGGATGAACATTGGGAGTTGCTAGCTGAGGACTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: AEGTGSRLEDLTAAP*SRDEHWELLAEDCG Trigger: TCCACAGTCCTCAGCTAGCAACTCCCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAAGTCTTCCAGTCGACTCCCTGTCCCTTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS TCA 90 bp | AGAGCGCCCCGGGCTTTTGGATGCAGGGAACAGATTGCAAGTGGGTaGTTCCTTCTTTATGCTGGAGGGCTTCTTTCCGGATGCCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: RAPRAFGCREQIASG*FLLYAGGLLSGCHP Trigger: CGGGTGGCATCCGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | TGGATGCAGGGAACAGATTGCAAGTGGGTGATTCCTTCTTTATGCTaGAGGGCTTCTTTCCGGATGCCACCCGGACAGCCCTGGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: WMQGTDCKWVIPSLC*RASFRMPPGQPWLT Trigger: GGTCAGCCAGGGCTGTCCGGGTGGCATCCGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | GCTCAAGGCACCCGATCCCCCATAGTCTCTACTTCAGAGGTCAGCCCTGGAGGCGATGCAGGGAACAGATaGCAAGTGGGTGATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQGTRSPIVSTSEVSPGGDAGNR*QVGDSF Trigger: GAAGGAATCACCCACTTGCAATCTGTTCCCTGCATC...GCCTCCAGGGCTGACCTCTGAAGTAGAGACTATGGGGGATCGGGTGCCTTGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 90 bp | GTGCAAGAGGAGAGCGCCCCGGGCTTTTGGATGCAGGGAACAGATTaGAAGTGGGTGATTCCTTCTTTATGCTGGAGGGCTTCTTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VQEESAPGFWMQGTD*KWVIPSLCWRASFR Trigger: CCGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCCTCTTGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | GAGGAGAGCGCCCCGGGCTTTTGGATGCAGGGAACAGATTGCAAGTaGGTGATTCCTTCTTTATGCTGGAGGGCTTCTTTCCGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EESAPGFWMQGTDCK*VIPSLCWRASFRMP Trigger: TGGCATCCGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 90 bp | TTTTGGATGCAGGGAACAGATTGCAAGTGGGTGATTCCTTCTTTATaGTGGAGGGCTTCTTTCCGGATGCCACCCGGACAGCCCTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FWMQGTDCKWVIPSL*WRASFRMPPGQPWL Trigger: CAGCCAGGGCTGTCCGGGTGGCATCCGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | CGACTGGAAGACTTGACAGCTGCTCCCTGGAGCCGGGATGAACATTaGGAGTTGCTAGCTGAGGACTGTGGAACTGGTCTGACAGGAATT | + |
|
Preference number: 5 (lower is better) Translates to: RLEDLTAAPWSRDEH*ELLAEDCGTGLTGI Trigger: AATTCCTGTCAGACCAGTTCCACAGTCCTCAGCTAGCAACTCCCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAAGTCTTCCAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | GGCGGGCTCCTAAGGCCGCTCATATGGGAATGGCCAGTGAACCGTGGTAGAAGATGGTGGTTGGAAGGTTaGTTTTCTGGGAAACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GGLLRPLIWEWPVNRGRRWWLEG*FSGKQR Trigger: CCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCA...TCTTCTACCACGGTTCACTGGCCATTCCCATATGAGCGGCCTTAGGAGCCCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | GGAGTTAGGGACCACTGGCAGAGGAGAGTCCAGACTTTGATGGCTAAGATGGTAGCCGAGGTGGAAGAATaGGTTGTGCAAGAGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GVRDHWQRRVQTLMAKMVAEVEE*VVQEES Trigger: GCTCTCCTCTTGCACAACCAATTCTTCCACCTCGGC...TACCATCTTAGCCATCAAAGTCTGGACTCTCCTCTGCCAGTGGTCCCTAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | GTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACAGACCAGTATCCAGTCAAGTCGACTGGAAGACTaGACAGCTGCTCCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLYISCPPGLSKQTSIQSSRLED*TAAPWS Trigger: GCTCCAGGGAGCAGCTGTCAAGTCTTCCAGTCGACT...TGACTGGATACTGGTCTGTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 90 bp | GAGGTGGAAGAATTGGTTGTGCAAGAGGAGAGCGCCCCGGGCTTTTaGATGCAGGGAACAGATTGCAAGTGGGTGATTCCTTCTTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: EVEELVVQEESAPGF*MQGTDCKWVIPSLC Trigger: GCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCCTCTTGCACAACCAATTCTTCCACCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | GAATTCATAGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACACTCGGGTGGCAGGCTaGGGGATGGCTGAAGGGACA | + |
|
Preference number: 5 (lower is better) Translates to: EFIGNKFCTSAVLLAFPNTRVAG*GMAEGT Trigger: TGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAGT...GTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCTATGAATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | TTCCAAACAGACCAGTATCCAGTCAGGAAGACATGTCATAGAGAACTGAGCCGGGATGCAGGGAACAGATaGCAAGTGGGTGATTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: FQTDQYPVRKTCHRELSRDAGNR*QVGDSF Trigger: GAAGGAATCACCCACTTGCAATCTGTTCCCTGCATC...CCGGCTCAGTTCTCTATGACATGTCTTCCTGACTGGATACTGGTCTGTTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | GAATTCATAGGAAACAAGTTCTGTACATCAGCTGTCCTCCTGGCCTTTCCAAACGCCGAGGTGGAAGAATaGGTTGTGCAAGAGGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: EFIGNKFCTSAVLLAFPNAEVEE*VVQEES Trigger: GCTCTCCTCTTGCACAACCAATTCTTCCACCTCGGC...GTTTGGAAAGGCCAGGAGGACAGCTGATGTACAGAACTTGTTTCCTATGAATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS-3UTR CAA 90 bp | TTTGTTTGTGAGTTTCTCCACGGGCAGATGACCTCTGCCCCTCTCTTCTTCTTTTGGTGGTTGGAAGGTTaGTTTTCTGGGAAACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: FVCEFLHGQMTSAPLFFFWWLEG*FSGKQR Trigger: CCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCA...AAAGAAGAAGAGAGGGGCAGAGGTCATCTGCCCGTGGAGAAACTCACAAACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 72 bp | CTAGTCGGTCCAGGGACTGCAGCTTTCCTGAGGGGCTaGGCCCTGCCTCGAGCGGCACTGGTGGTCCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: LVGPGTAAFLRG*ALPRAALVVLP Trigger: AGGCAGGACCACCAGTGCCGCTCGAGGCAGGGCGCAGCCCCTCAGGAAAGCTGCAGTCCCTGGACCGACTAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 72 bp | GGGGCTGCGCCCTGCCTCGAGCGGCACTGGTGGTCCTaGCTCGAGCCGCACTGGTGGTTGGAAGGTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: GAAPCLERHWWS*LEPHWWLEGLF Trigger: AAACAAACCTTCCAACCACCAGTGCGGCTCGAGGCAGGACCACCAGTGCCGCTCGAGGCAGGGCGCAGCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 72 bp | TGCTCCGGAGCCCAGCTAGGCTGCTTGGAGGTGGGGTaGTCCAAGAACTCACGGTGGGCAGCAGATCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: CSGAQLGCLEVG*SKNSRWAADLG Trigger: TCCGAGATCTGCTGCCCACCGTGAGTTCTTGGAGCACCCCACCTCCAAGCAGCCTAGCTGGGCTCCGGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CCA 72 bp | AAACCGCACACCCTGGAGGGCGGGAGCTACTTCATTTaGGTTACTCCGATGGGCGAGGCCCCGTCGAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: KPHTLEGGSYFI*VTPMGEAPSKW Trigger: CCACTTCGACGGGGCCTCGCCCATCGGAGTAACCCAAATGAAGTAGCTCCCGCCCTCCAGGGTGTGCGGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CAA 90 bp | CCAGGTGGTAGACTCCGCCCAATGAGTGGCACTCGGGTGGCAGGCTaGGGGATGGCTGAAGGGACAGGGAGTCGACTGGAAGACTTGACA | + |
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Preference number: 6 (lower is better) Translates to: PGGRLRPMSGTRVAG*GMAEGTGSRLEDLT Trigger: TGTCAAGTCTTCCAGTCGACTCCCTGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAGTGCCACTCATTGGGCGGAGTCTACCACCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | GGCTGCTTGGAGGTGGGGTGCTCCAAGAACTCACGGTaGGCAGCAGATCTCGGACAGGGCTATCCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: GCLEVGCSKNSR*AADLGQGYPSG Trigger: TCCTGAAGGATAGCCCTGTCCGAGATCTGCTGCCCACCGTGAGTTCTTGGAGCACCCCACCTCCAAGCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CCA 72 bp | TGTTGTCCGGGCACCGAACCCAGTTTTCCGCCGAGGTaGAAGAATTGGTTGTGCAAGAGGAGAGCGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: CCPGTEPSFPPR*KNWLCKRRAPR Trigger: CCGGGGCGCTCTCCTCTTGCACAACCAATTCTTCCACCTCGGCGGAAAACTGGGTTCGGTGCCCGGACAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 90 bp | TGCCTCGAGCGGCACTGGTGGTCCTGCCTCGAGCCGCACTGGTGGTaGGAAGGTTTGTTTTCTGGGAAACAGAGGCTCTGTGCCCTATGG | + |
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Preference number: 6 (lower is better) Translates to: CLERHWWSCLEPHWW*EGLFSGKQRLCALW Trigger: CCATAGGGCACAGAGCCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAGGCAGGACCACCAGTGCCGCTCGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS TCA 72 bp | AATGAGTGGCACTCGGGTGGCAGGCTTGGGGATGGCTaGAGGGACAGGGAGTCGACTGGAAGACTTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: NEWHSGGRLGDG*RDRESTGRLDS Trigger: GCTGTCAAGTCTTCCAGTCGACTCCCTGTCCCTTCAGCCATCCCCAAGCCTGCCACCCGAGTGCCACTCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 72 bp | GGACTGTGGAACTGGTCTGACAGGAATTGGTGGGCTTaGTGTTGTCCGGGCACCGAACCCAGTTTTCCGCCG | + |
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Preference number: 6 (lower is better) Translates to: GLWNWSDRNWWA*CCPGTEPSFPP Trigger: CGGCGGAAAACTGGGTTCGGTGCCCGGACAACAGCAAGCCCACCAATTCCTGTCAGACCAGTTCCACAGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | TGGAGGGCGGGAGCTACTTCATTTGGGTTACTCCGATaGGCGAGGCCCCGTCGAAGTGGTTTCTCTGGACTC | + |
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Preference number: 6 (lower is better) Translates to: WRAGATSFGLLR*ARPRRSGFSGL Trigger: GAGTCCAGAGAAACCACTTCGACGGGGCCTCGCCCATCGGAGTAACCCAAATGAAGTAGCTCCCGCCCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CCA 72 bp | TCAGGGCACACTCCTCCAGCTGAGCCGCCAGGCGGTTaGCTTCATCAAGAATCTCTTCCAGCTTCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SGHTPPAEPPGG*LHQESLPASLG Trigger: GCCCAGAGAAGCTGGAAGAGATTCTTGATGAAGCCAACCGCCTGGCGGCTCAGCTGGAGGAGTGTGCCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CCA 72 bp | GAGCGGCACTGGTGGTCCTGCCTCGAGCCGCACTGGTaGTTGGAAGGTTTGTTTTCTGGGAAACAGAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: ERHWWSCLEPHW*LEGLFSGKQRL Trigger: GAGCCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAGGCAGGACCACCAGTGCCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 72 bp | CCTTTTTATCACTGCTCCGGAGCCCAGCTAGGCTGCTaGGAGGTGGGGTGCTCCAAGAACTCACGGTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: PFYHCSGAQLGC*EVGCSKNSRWA Trigger: TGCCCACCGTGAGTTCTTGGAGCACCCCACCTCCAAGCAGCCTAGCTGGGCTCCGGAGCAGTGATAAAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 ENSMUST00000128089.2 |
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| CDS CAA 72 bp | GGGATGGCTGAAGGGACAGGGAGTCGACTGGAAGACTaGACAGCTGCTCCCTGGAGCCGGGATGAACATTGG | + |
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Preference number: 6 (lower is better) Translates to: GMAEGTGSRLED*TAAPWSRDEHW Trigger: CCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAAGTCTTCCAGTCGACTCCCTGTCCCTTCAGCCATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 90 bp | CGGCACTGGTGGTCCTGCCTCGAGCCGCACTGGTGGTTGGAAGGTTaGTTTTCTGGGAAACAGAGGCTCTGTGCCCTATGGCGCTTGGAT | + |
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Preference number: 6 (lower is better) Translates to: RHWWSCLEPHWWLEG*FSGKQRLCALWRLD Trigger: ATCCAAGCGCCATAGGGCACAGAGCCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAGGCAGGACCACCAGTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | GGCACTGGTGGTCCTGCCTCGAGCCGCACTGGTGGTTaGAAGGTTTGTTTTCTGGGAAACAGAGGCTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: GTGGPASSRTGG*KVCFLGNRGSV Trigger: CACAGAGCCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAGGCAGGACCACCAGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | GACTTGACAGCTGCTCCCTGGAGCCGGGATGAACATTaGGAGTTGCTAGCTGAGGACTGTGGAACTGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: DLTAAPWSRDEH*ELLAEDCGTGL Trigger: CAGACCAGTTCCACAGTCCTCAGCTAGCAACTCCCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | ACAGGGAGTCGACTGGAAGACTTGACAGCTGCTCCCTaGAGCCGGGATGAACATTGGGAGTTGCTAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TGSRLEDLTAAP*SRDEHWELLAE Trigger: CTCAGCTAGCAACTCCCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAAGTCTTCCAGTCGACTCCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 72 bp | GGAGAGCGCCCCGGGCTTTTGGATGCAGGGAACAGATaGCAAGTGGGTGATTCCTTCTTTATGCTGGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GERPGLLDAGNR*QVGDSFFMLEG Trigger: GCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 72 bp | TGGTCCTGCCTCGAGCCGCACTGGTGGTTGGAAGGTTaGTTTTCTGGGAAACAGAGGCTCTGTGCCCTATGG | + |
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Preference number: 6 (lower is better) Translates to: WSCLEPHWWLEG*FSGKQRLCALW Trigger: CCATAGGGCACAGAGCCTCTGTTTCCCAGAAAACAAACCTTCCAACCACCAGTGCGGCTCGAGGCAGGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 90 bp | GAAGACTTGACAGCTGCTCCCTGGAGCCGGGATGAACATTGGGAGTaGCTAGCTGAGGACTGTGGAACTGGTCTGACAGGAATTGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: EDLTAAPWSRDEHWE*LAEDCGTGLTGIGG Trigger: CCCACCAATTCCTGTCAGACCAGTTCCACAGTCCTCAGCTAGCAACTCCCAATGTTCATCCCGGCTCCAGGGAGCAGCTGTCAAGTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS GCA 72 bp | GAGAGCGCCCCGGGCTTTTGGATGCAGGGAACAGATTaGAAGTGGGTGATTCCTTCTTTATGCTGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ESAPGFWMQGTD*KWVIPSLCWRA Trigger: AGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | GGAACAGATTGCAAGTGGGTGATTCCTTCTTTATGCTaGAGGGCTTCTTTCCGGATGCCACCCGGACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GTDCKWVIPSLC*RASFRMPPGQP Trigger: GGGCTGTCCGGGTGGCATCCGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 90 bp | TGTGCAAGAGGAGAGCGCCCCGGGCTTTTGGATGCAGGGAACAGATaGCAAGTGGGTGATTCCTTCTTTATGCTGGAGGGCTTCTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: CARGERPGLLDAGNR*QVGDSFFMLEGFFP Trigger: CGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCCTCTTGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS TCA 72 bp | GAGGCTCTGTGCCCTATGGCGCTTGGATGCCCTTTCTaGGTTGAGAGAGAATCTGGAGCTAGGGCACCTTTT | + |
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Preference number: 6 (lower is better) Translates to: EALCPMALGCPF*VERESGARAPF Trigger: AAAAGGTGCCCTAGCTCCAGATTCTCTCTCAACTCAGAAAGGGCATCCAAGCGCCATAGGGCACAGAGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | GAATTGGTTGTGCAAGAGGAGAGCGCCCCGGGCTTTTaGATGCAGGGAACAGATTGCAAGTGGGTGATTCCT | + |
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Preference number: 6 (lower is better) Translates to: ELVVQEESAPGF*MQGTDCKWVIP Trigger: AGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCCTCTTGCACAACCAATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 72 bp | AGAATTGGTTGTGCAAGAGGAGAGCGCCCCGGGCTTTaGGATGCAGGGAACAGATTGCAAGTGGGTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: RIGCARGERPGL*DAGNRLQVGDS Trigger: GGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCCTCTTGCACAACCAATTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 90 bp | AAACAGAGGCTCTGTGCCCTATGGCGCTTGGATGCCCTTTCTGAGTaGAGAGAGAATCTGGAGCTAGGGCACCTTTTCCAGGTGGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: KQRLCALWRLDALSE*RENLELGHLFQVVD Trigger: GTCTACCACCTGGAAAAGGTGCCCTAGCTCCAGATTCTCTCTCAACTCAGAAAGGGCATCCAAGCGCCATAGGGCACAGAGCCTCTGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CCA 72 bp | GCCCCGGGCTTTTGGATGCAGGGAACAGATTGCAAGTaGGTGATTCCTTCTTTATGCTGGAGGGCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: APGFWMQGTDCK*VIPSLCWRASF Trigger: GAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 90 bp | CGAGGTGGAAGAATTGGTTGTGCAAGAGGAGAGCGCCCCGGGCTTTaGGATGCAGGGAACAGATTGCAAGTGGGTGATTCCTTCTTTATG | + |
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Preference number: 6 (lower is better) Translates to: RGGRIGCARGERPGL*DAGNRLQVGDSFFM Trigger: CATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCGGGGCGCTCTCCTCTTGCACAACCAATTCTTCCACCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 90 bp | GAAGGTTTGTTTTCTGGGAAACAGAGGCTCTGTGCCCTATGGCGCTaGGATGCCCTTTCTGAGTTGAGAGAGAATCTGGAGCTAGGGCAC | + |
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Preference number: 6 (lower is better) Translates to: EGLFSGKQRLCALWR*DALSELRENLELGH Trigger: GTGCCCTAGCTCCAGATTCTCTCTCAACTCAGAAAGGGCATCCAAGCGCCATAGGGCACAGAGCCTCTGTTTCCCAGAAAACAAACCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS TCA 72 bp | CGGGCTTTTGGATGCAGGGAACAGATTGCAAGTGGGTaGTTCCTTCTTTATGCTGGAGGGCTTCTTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: RAFGCREQIASG*FLLYAGGLLSG Trigger: TCCGGAAAGAAGCCCTCCAGCATAAAGAAGGAATCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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| CDS CAA 72 bp | TTTTCTGGGAAACAGAGGCTCTGTGCCCTATGGCGCTaGGATGCCCTTTCTGAGTTGAGAGAGAATCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: FSGKQRLCALWR*DALSELRENLE Trigger: CTCCAGATTCTCTCTCAACTCAGAAAGGGCATCCAAGCGCCATAGGGCACAGAGCCTCTGTTTCCCAGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090561.10 ENSMUST00000102629.8 |
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