Pregenerated sensors for PSMG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024537Ensembl transcript IDs: ENSMUST00000025418.4, ENSMUST00000235799.2
Found 33 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | AATTTCTGTACAGCACACACCCAACAGCCTCTTTTGTaGTCTCAGCAGGATGAGGGAGAAACTGAAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: NFCTAHTQQPLL*SQQDEGETENR Trigger: TCTGTTTTCAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTGTACAGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR GCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGTCCTGGCACAGCCGCTaGTTTCCACCCAGGCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLSWHSR*FPPRPA Trigger: TGCTGGCCTGGGTGGAAAGCAGCGGCTGTGCCAGGA...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR GCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGACCGGAAGGGAGTACTaGGCAGCTGGGCATCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLTGREY*AAGHRC Trigger: GCAACGATGCCCAGCTGCGCAGTACTCCCTTCCGGT...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR GCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGCCAAGGCAGGGCAGATaGCATGGGGCCGTCGTTACA | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLPRQGR*HGAVVT Trigger: TGTAACGACGGCCCCATGGCATCTGCCCTGCCTTGG...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR TCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGTGCTTGAGAGAACAATaGTCCTGGCACAGCCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLCLREQ*SWHSRC Trigger: GCAGCGGCTGTGCCAGGATCATTGTTCTCTCAAGCA...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR TCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGTGGGCATCGTTGCGGTaGTACGAATGGCTGCTTGAG | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLWASLR*YEWLLE Trigger: CTCAAGCAGCCATTCGTATCACCGCAACGATGCCCA...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR GCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGCGCTCATCTCAGGGATaGACCGACTCTTTTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLRSSQG*TDSFPF Trigger: AAATGGAAAAGAGTCGGTGCATCCCTGAGATGAGCG...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR TCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGCGTCGTTACAGGGTTTaGTTATCTGAAGCCATTCAT | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLRRYRV*LSEAIH Trigger: ATGAATGGCTTCAGATAATCAAACCCTGTAACGACG...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR GCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGATTTCCAACGGATACTaGTGGCATCAGGAGTGTAAA | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLISNGY*WHQECK Trigger: TTTACACTCCTGATGCCAGCAGTATCCGTTGGAAAT...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025418.4 |
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| CDS-3UTR CCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGAGATCTATTGCAAGCTaGCCAACATTTCCAACGGAT | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLRSIAS*PTFPTD Trigger: ATCCGTTGGAAATGTTGGCCAGCTTGCAATAGATCT...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025418.4 |
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| CDS-3UTR CCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGAGCAGAACTGCCATCTaGATCTCTTTAGAACAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLSRTAI*ISLEQL Trigger: AAGCTGTTCTAAAGAGATCCAGATGGCAGTTCTGCT...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR TCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGCAGGGTTTGATTATCTaGAGCCATTCATTAAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLQGLII*SHSLRY Trigger: GTACCTTAATGAATGGCTTCAGATAATCAAACCCTG...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR GCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGTTCCACCTCCAGGAATaGGAATACAAAACTCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLFHLQE*EYKTQN Trigger: ATTCTGAGTTTTGTATTCGCATTCCTGGAGGTGGAA...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR CCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGATTGTTTCCAACCATTaGCACCAGGCAATCAGTATA | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLIVSNH*HQAISI Trigger: TATACTGATTGCCTGGTGCCAATGGTTGGAAACAAT...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR CCA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGTTCTTCAGTTGCATATaGATTGTTTCCAACCATTGG | + |
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Preference number: 4 (lower is better) Translates to: QHTPNSLFCDLSRMREKLFFSCI*IVSNHW Trigger: CCAATGGTTGGAAACAATCCATATGCAACTGAAGAA...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS CCA 90 bp | ACAGCGCGGGAGGAAGCCCACTGCCAAAGAGCAGCCGCCAAGAGCTaGGGATCTTCCAAGGCAGGGCAGATGCCATGGGGCCGTCGTTAC | + |
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Preference number: 5 (lower is better) Translates to: TAREEAHCQRAAAKS*GSSKAGQMPWGRRY Trigger: GTAACGACGGCCCCATGGCATCTGCCCTGCCTTGGAAGATCCCCAGCTCTTGGCGGCTGCTCTTTGGCAGTGGGCTTCCTCCCGCGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS TCA 90 bp | AGTACTGCGCAGCTGGGCATCGTTGCGGTGATACGAATGGCTGCTTaGGAGAACAATGATCCTGGCACAGCCGCTGCTTTCCACCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: STAQLGIVAVIRMAA*ENNDPGTAAAFHPG Trigger: GCCTGGGTGGAAAGCAGCGGCTGTGCCAGGATCATTGTTCTCTCAAGCAGCCATTCGTATCACCGCAACGATGCCCAGCTGCGCAGTACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS TCA 90 bp | GCTGGGCATCGTTGCGGTGATACGAATGGCTGCTTGAGAGAACAATaGTCCTGGCACAGCCGCTGCTTTCCACCCAGGCCAGCAGCTTTT | + |
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Preference number: 5 (lower is better) Translates to: AGHRCGDTNGCLREQ*SWHSRCFPPRPAAF Trigger: AAAAGCTGCTGGCCTGGGTGGAAAGCAGCGGCTGTGCCAGGATCATTGTTCTCTCAAGCAGCCATTCGTATCACCGCAACGATGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS TCA 90 bp | AGCAGATACCGGAAGGGAGTACTGCGCAGCTGGGCATCGTTGCGGTaGTACGAATGGCTGCTTGAGAGAACAATGATCCTGGCACAGCCG | + |
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Preference number: 5 (lower is better) Translates to: SRYRKGVLRSWASLR*YEWLLERTMILAQP Trigger: CGGCTGTGCCAGGATCATTGTTCTCTCAAGCAGCCATTCGTATCACCGCAACGATGCCCAGCTGCGCAGTACTCCCTTCCGGTATCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR CAA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGGATTGTTTCCAACCATaGGCACCAGGCAATCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: QHTPNSLFCDLSRMREKLDCFQP*APGNQY Trigger: ATACTGATTGCCTGGTGCCAATGGTTGGAAACAATC...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR CAA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGTCAGTTGCATATGGATaGTTTCCAACCATTGGCACC | + |
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Preference number: 5 (lower is better) Translates to: QHTPNSLFCDLSRMREKLSVAYG*FPTIGT Trigger: GGTGCCAATGGTTGGAAACAATCCATATGCAACTGA...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR CAA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGACGGCATCTGGGATATaGTCCCCTTCTGAAACAAAT | + |
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Preference number: 5 (lower is better) Translates to: QHTPNSLFCDLSRMREKLTASGI*SPSETN Trigger: ATTTGTTTCAGAAGGGGACAATATCCCAGATGCCGT...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS-3UTR CAA 90 bp | CAGCACACACCCAACAGCCTCTTTTGTGATCTCAGCAGGATGAGGGAGAAACTGATTCTGAACACTCTTTaGCAAACAAGGTGTAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: QHTPNSLFCDLSRMREKLILNTL*QTRCKQ Trigger: CTGCTTACACCTTGTTTGCAAAAGAGTGTTCAGAAT...CAGTTTCTCCCTCATCCTGCTGAGATCACAAAAGAGGCTGTTGGGTGTGTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS GCA 90 bp | CTCCAGGAATGCGAATACAAAACTCAGAATCGCTCATCTCAGGGATaGACCGACTCTTTTCCATTTCTAGCCAGTTCAGGCTCTTTATTT | + |
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Preference number: 5 (lower is better) Translates to: LQECEYKTQNRSSQG*TDSFPFLASSGSLF Trigger: AAATAAAGAGCCTGAACTGGCTAGAAATGGAAAAGAGTCGGTGCATCCCTGAGATGAGCGATTCTGAGTTTTGTATTCGCATTCCTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS TCA 90 bp | TCACAGAATGACTTCGATTTGTACTTAATAAAGATGGACCTTAACTaGAGCACCACTAGCTTCTTTGACGGTAAGGAATACACTTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: SQNDFDLYLIKMDLN*STTSFFDGKEYTSV Trigger: TACTGAAGTGTATTCCTTACCGTCAAAGAAGCTAGTGGTGCTTCAGTTAAGGTCCATCTTTATTAAGTACAAATCGAAGTCATTCTGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS CCA 72 bp | GAGGAAGCCCACTGCCAAAGAGCAGCCGCCAAGAGCTaGGGATCTTCCAAGGCAGGGCAGATGCCATGGGGC | + |
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Preference number: 6 (lower is better) Translates to: EEAHCQRAAAKS*GSSKAGQMPWG Trigger: GCCCCATGGCATCTGCCCTGCCTTGGAAGATCCCCAGCTCTTGGCGGCTGCTCTTTGGCAGTGGGCTTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS TCA 72 bp | CAGCTGGGCATCGTTGCGGTGATACGAATGGCTGCTTaGGAGAACAATGATCCTGGCACAGCCGCTGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QLGIVAVIRMAA*ENNDPGTAAAF Trigger: GAAAGCAGCGGCTGTGCCAGGATCATTGTTCTCTCAAGCAGCCATTCGTATCACCGCAACGATGCCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS GCA 72 bp | TGCGAATACAAAACTCAGAATCGCTCATCTCAGGGATaGACCGACTCTTTTCCATTTCTAGCCAGTTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: CEYKTQNRSSQG*TDSFPFLASSG Trigger: GCCTGAACTGGCTAGAAATGGAAAAGAGTCGGTGCATCCCTGAGATGAGCGATTCTGAGTTTTGTATTCGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS CAA 90 bp | AGCCATTCATTAAGGTACTCCACAAGGCTGACGGCATCTGGGATATaGTCCCCTTCTGAAACAAATTTTAGCAGAACTGCCATCTGGATC | + |
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Preference number: 6 (lower is better) Translates to: SHSLRYSTRLTASGI*SPSETNFSRTAIWI Trigger: GATCCAGATGGCAGTTCTGCTAAAATTTGTTTCAGAAGGGGACAATATCCCAGATGCCGTCAGCCTTGTGGAGTACCTTAATGAATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS CAA 72 bp | TTAAGGTACTCCACAAGGCTGACGGCATCTGGGATATaGTCCCCTTCTGAAACAAATTTTAGCAGAACTGCC | + |
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Preference number: 6 (lower is better) Translates to: LRYSTRLTASGI*SPSETNFSRTA Trigger: GGCAGTTCTGCTAAAATTTGTTTCAGAAGGGGACAATATCCCAGATGCCGTCAGCCTTGTGGAGTACCTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS TCA 72 bp | GACTTCGATTTGTACTTAATAAAGATGGACCTTAACTaGAGCACCACTAGCTTCTTTGACGGTAAGGAATAC | + |
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Preference number: 6 (lower is better) Translates to: DFDLYLIKMDLN*STTSFFDGKEY Trigger: GTATTCCTTACCGTCAAAGAAGCTAGTGGTGCTTCAGTTAAGGTCCATCTTTATTAAGTACAAATCGAAGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS TCA 72 bp | TCCATTTCTAGCCAGTTCAGGCTCTTTATTTTATTCTaGACACTCTTTTGCAAACAAGGTGTAAGCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: SISSQFRLFILF*TLFCKQGVSRY Trigger: GTATCTGCTTACACCTTGTTTGCAAAAGAGTGTTCAGAATAAAATAAAGAGCCTGAACTGGCTAGAAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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| CDS CCA 72 bp | TTCTTCTTCAGTTGCATATGGATTGTTTCCAACCATTaGCACCAGGCAATCAGTATAGAAATAACCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: FFFSCIWIVSNH*HQAISIEITNL Trigger: AAGATTGGTTATTTCTATACTGATTGCCTGGTGCCAATGGTTGGAAACAATCCATATGCAACTGAAGAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025418.4 ENSMUST00000235799.2 |
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