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Pregenerated sensors for PSMG1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000022913

Ensembl transcript IDs: ENSMUST00000023630.16, ENSMUST00000233128.2, ENSMUST00000233590.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCACAATGTTCGGCTGTTCCAGCAGTGGGCAGCAGAGGGCATCTTTaGATGTCTGAGTTTTTAGGGCTCTCAGGAAAGGAGAGGAAAGGC +
Preference number: 1 (lower is better)
Translates to: AQCSAVPAVGSRGHL*MSEFLGLSGKERKG
Trigger: GCCTTTCCTCTCCTTTCCTGAGAGCCCTAAAAACTCAGACATTCAAAGATGCCCTCTGCTGCCCACTGCTGGAACAGCCGAACATTGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR GCA 90 bp CAGAACCGCAGGGATTTTCCATACTTGACAGTAGCTCAGAACTGCTaGAGACAGGTCATGCACAATGTTCGGCTGTTCCAGCAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: QNRRDFPYLTVAQNC*RQVMHNVRLFQQWA
Trigger: TGCCCACTGCTGGAACAGCCGAACATTGTGCATGACCTGTCTGCAGCAGTTCTGAGCTACTGTCAAGTATGGAAAATCCCTGCGGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR GCA 90 bp ATACAGAACCGCAGGGATTTTCCATACTTGACAGTAGCTCAGAACTaGTGCAGACAGGTCATGCACAATGTTCGGCTGTTCCAGCAGTGG +
Preference number: 1 (lower is better)
Translates to: IQNRRDFPYLTVAQN*CRQVMHNVRLFQQW
Trigger: CCACTGCTGGAACAGCCGAACATTGTGCATGACCTGTCTGCAGCAGTTCTGAGCTACTGTCAAGTATGGAAAATCCCTGCGGTTCTGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR CAA 90 bp GATGTGCCGGCATGTGAGAACGGTTACCTGCATGCTCTTTCTGGGTaGGAAGCCGAAAACCTTCTCCAACCACTGGAACTGCTGATCCTC +
Preference number: 2 (lower is better)
Translates to: DVPACENGYLHALSG*EAENLLQPLELLIL
Trigger: GAGGATCAGCAGTTCCAGTGGTTGGAGAAGGTTTTCGGCTTCCAACCCAGAAAGAGCATGCAGGTAACCGTTCTCACATGCCGGCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR-3UTR GCA 90 bp TCAACTTCTTCAGAATTTCTGTGCTTTCAGGAATGTTCTTCACCAAGCATTTCAGCTGCAGACAGGTCATaGACAATGTTCGGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: STSSEFLCFQECSSPSISAADRS*TMFGCS
Trigger: GGAACAGCCGAACATTGTGCATGACCTGTCTGCAGC...TGAAATGCTTGGTGAAGAACATTCCTGAAAGCACAGAAATTCTGAAGAAGTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR-3UTR TCA 90 bp TTCTTCAGAATTTCTGTGCTTTCAGGAATGTTCTTCACCAAGCATTTCAAGCTCAGCAGAGGGCATCTTTaGATGTCTGAGTTTTTAGGG +
Preference number: 2 (lower is better)
Translates to: FFRISVLSGMFFTKHFKLSRGHL*MSEFLG
Trigger: CCCTAAAAACTCAGACATTCAAAGATGCCCTCTGCT...GAGCTTGAAATGCTTGGTGAAGAACATTCCTGAAAGCACAGAAATTCTGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR-3UTR GCA 90 bp AACTTCTTCAGAATTTCTGTGCTTTCAGGAATGTTCTTCACCAAGCATTTCAAGGTAGCTCAGAACTGCTaGAGACAGGTCATGCACAAT +
Preference number: 2 (lower is better)
Translates to: NFFRISVLSGMFFTKHFKVAQNC*RQVMHN
Trigger: ATTGTGCATGACCTGTCTGCAGCAGTTCTGAGCTAC...CTTGAAATGCTTGGTGAAGAACATTCCTGAAAGCACAGAAATTCTGAAGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR-3UTR CCA 90 bp GTAAATGTTGCTCTGAATCTCATTTGTGGTCATCAACTTCTTCAGAATTTCTGTCCTGCATGCTCTTTCTaGGTTGGAAGCCGAAAACCT +
Preference number: 2 (lower is better)
Translates to: VNVALNLICGHQLLQNFCPACSF*VGSRKP
Trigger: AGGTTTTCGGCTTCCAACCCAGAAAGAGCATGCAGG...ACAGAAATTCTGAAGAAGTTGATGACCACAAATGAGATTCAGAGCAACATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR CCA 72 bp CATGTGAGAACGGTTACCTGCATGCTCTTTCTGGGTTaGAAGCCGAAAACCTTCTCCAACCACTGGAACTGC +
Preference number: 3 (lower is better)
Translates to: HVRTVTCMLFLG*KPKTFSNHWNC
Trigger: GCAGTTCCAGTGGTTGGAGAAGGTTTTCGGCTTCCAACCCAGAAAGAGCATGCAGGTAACCGTTCTCACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR GCA 72 bp CGCAGGGATTTTCCATACTTGACAGTAGCTCAGAACTaGTGCAGACAGGTCATGCACAATGTTCGGCTGTTC +
Preference number: 3 (lower is better)
Translates to: RRDFPYLTVAQN*CRQVMHNVRLF
Trigger: GAACAGCCGAACATTGTGCATGACCTGTCTGCAGCAGTTCTGAGCTACTGTCAAGTATGGAAAATCCCTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
CDS-3UTR GCA 90 bp GCTCTTTCTGGGTTGGAAGCCGAAAACCTTCTCCAACCACTGGAACTGCTGATCGTGTCCCGCCTGCTCTaGTCCTCCTCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: ALSGLEAENLLQPLELLIVSRLL*SSSSSS
Trigger: GGAAGAAGAGGAGGAGGAGCAGAGCAGGCGGGACAC...GATCAGCAGTTCCAGTGGTTGGAGAAGGTTTTCGGCTTCCAACCCAGAAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
CDS-3UTR GCA 90 bp TCAACTTCTTCAGAATTTCTGTGCTTTCAGGAATGTTCTTCACCAAGCATTTCACTCTTCCGCGCCAGCTaGCGCCGGACCTCCCGGTCC +
Preference number: 4 (lower is better)
Translates to: STSSEFLCFQECSSPSISLFRAS*RRTSRS
Trigger: GGACCGGGAGGTCCGGCGGCAGCTGGCGCGGAAGAG...TGAAATGCTTGGTGAAGAACATTCCTGAAAGCACAGAAATTCTGAAGAAGTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
3UTR CAA 72 bp GCATGTGAGAACGGTTACCTGCATGCTCTTTCTGGGTaGGAAGCCGAAAACCTTCTCCAACCACTGGAACTG +
Preference number: 4 (lower is better)
Translates to: ACENGYLHALSG*EAENLLQPLEL
Trigger: CAGTTCCAGTGGTTGGAGAAGGTTTTCGGCTTCCAACCCAGAAAGAGCATGCAGGTAACCGTTCTCACATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
CDS-3UTR GCA 90 bp AGCTACACTGACATAGAAAAACCGAGGGATCTGATTTCAGTTGATAAAACACACCCTCAGTCCCAGCTCTaGACGGCGCCTTCACCACCT +
Preference number: 4 (lower is better)
Translates to: SYTDIEKPRDLISVDKTHPQSQL*TAPSPP
Trigger: AGGTGGTGAAGGCGCCGTGCAGAGCTGGGACTGAGG...GTGTGTTTTATCAACTGAAATCAGATCCCTCGGTTTTTCTATGTCAGTGTAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
CDS GCA 90 bp TCTGTCTGTCTTCGGAGAAGCCGAACCTCCCTCTTCCGCGCCAGCTaGCGCCGGACCTCCCGGTCCTCCGGCGTGTCCCGCCTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SVCLRRSRTSLFRAS*RRTSRSSGVSRLLC
Trigger: GCAGAGCAGGCGGGACACGCCGGAGGACCGGGAGGTCCGGCGGCAGCTGGCGCGGAAGAGGGAGGTTCGGCTTCTCCGAAGACAGACAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023630.16
ENSMUST00000233128.2
CDS TCA 90 bp AGCACAACCGACTTCTTCCCAGACTCCCGAGTTCATAACAAACGCTaGCAGGAATGCTGTTGCGTTGCTTCCTACTGCAATTATAAACTT +
Preference number: 5 (lower is better)
Translates to: STTDFFPDSRVHNKR*QECCCVASYCNYKL
Trigger: AAGTTTATAATTGCAGTAGGAAGCAACGCAACAGCATTCCTGTCAGCGTTTGTTATGAACTCGGGAGTCTGGGAAGAAGTCGGTTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023630.16
ENSMUST00000233128.2
CDS GCA 72 bp CTTCGGAGAAGCCGAACCTCCCTCTTCCGCGCCAGCTaGCGCCGGACCTCCCGGTCCTCCGGCGTGTCCCGC +
Preference number: 6 (lower is better)
Translates to: LRRSRTSLFRAS*RRTSRSSGVSR
Trigger: GCGGGACACGCCGGAGGACCGGGAGGTCCGGCGGCAGCTGGCGCGGAAGAGGGAGGTTCGGCTTCTCCGAAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023630.16
ENSMUST00000233128.2
CDS TCA 72 bp GACTTCTTCCCAGACTCCCGAGTTCATAACAAACGCTaGCAGGAATGCTCTTCCGCGCCAGCTGCCGCCGGA +
Preference number: 6 (lower is better)
Translates to: DFFPDSRVHNKR*QECSSAPAAAG
Trigger: TCCGGCGGCAGCTGGCGCGGAAGAGCATTCCTGTCAGCGTTTGTTATGAACTCGGGAGTCTGGGAAGAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233590.2
CDS TCA 72 bp GACTTCTTCCCAGACTCCCGAGTTCATAACAAACGCTaGCAGGAATGCTGTTGCGTTGCTTCCTACTGCAAT +
Preference number: 6 (lower is better)
Translates to: DFFPDSRVHNKR*QECCCVASYCN
Trigger: ATTGCAGTAGGAAGCAACGCAACAGCATTCCTGTCAGCGTTTGTTATGAACTCGGGAGTCTGGGAAGAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000023630.16
ENSMUST00000233128.2