Pregenerated sensors for PSMF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032869Ensembl transcript IDs: ENSMUST00000042452.11, ENSMUST00000109869.2, ENSMUST00000155939.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGGGATCACGCCAAGCAGGCTGCCTGCTAGTATGAGGACGGTGTaGGGAAATCTGGAGTGGGTCCACCTCTCTGGCAGTGGCAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: QGITPSRLPASMRTV*GNLEWVHLSGSGRW Trigger: CCACCTGCCACTGCCAGAGAGGTGGACCCACTCCAGATTTCCTCACACCGTCCTCATACTAGCAGGCAGCCTGCTTGGCGTGATCCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR TCA 90 bp | AGCTCCTGGGGGCACAGCACCAGGAGGAAGCCGGTTTGGGAGGCCTaGGGATGGGTCAATAAGTACTCTTGGGAAGCCGGATCTCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: SSWGHSTRRKPVWEA*GWVNKYSWEAGSQG Trigger: CCCCTGAGATCCGGCTTCCCAAGAGTACTTATTGACCCATCCTCAGGCCTCCCAAACCGGCTTCCTCCTGGTGCTGTGCCCCCAGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR GCA 90 bp | GGGATGCAACCCCAGCAGGCCTGCAAACACATGGGCAGAATCCTCTaGCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: GMQPQQACKHMGRIL*PKPTRILTLMGPVV Trigger: CACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCTGCTGGGGTTGCATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | GACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTaGAGCCACACATGGTTGGGCTGCCGGCCATGGAACGAAGCGCTT | + |
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Preference number: 1 (lower is better) Translates to: DWPWSCQSSLSPHLS*SHTWLGCRPWNEAL Trigger: AAGCGCTTCGTTCCATGGCCGGCAGCCCAACCATGTGTGGCTCCAGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | GAGGACGGTGTGAGGAAATCTGGAGTGGGTCCACCTCTCTGGCAGTaGCAGGTGGGAACTCCCTCGGAGGACTGTTTGCACGAGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: EDGVRKSGVGPPLWQ*QVGTPSEDCLHEPS Trigger: AGAAGGCTCGTGCAAACAGTCCTCCGAGGGAGTTCCCACCTGCCACTGCCAGAGAGGTGGACCCACTCCAGATTTCCTCACACCGTCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR TCA 90 bp | GCAAATGGGCTCAGGGGATCACGCCAAGCAGGCTGCCTGCTAGTATaGGGACGGTGTGAGGAAATCTGGAGTGGGTCCACCTCTCTGGCA | + |
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Preference number: 1 (lower is better) Translates to: ANGLRGSRQAGCLLV*GRCEEIWSGSTSLA Trigger: TGCCAGAGAGGTGGACCCACTCCAGATTTCCTCACACCGTCCTCATACTAGCAGGCAGCCTGCTTGGCGTGATCCCCTGAGCCCATTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR GCA 90 bp | AGACACACTAATTTCTCCGTGGGACCTATATGCAGCTTGGTGGGGTaGTGCAGCAGGCACCTCGGCTCTGACAAGGGCTGGGGATGCAAC | + |
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Preference number: 1 (lower is better) Translates to: RHTNFSVGPICSLVG*CSRHLGSDKGWGCN Trigger: GTTGCATCCCCAGCCCTTGTCAGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAATTAGTGTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR GCA 90 bp | CAGCCAGCCCAGAAGTCAACCCCAACTCCATGGGGTCATAGCCACTaGCCCGTGGCTGTTATCAAAGCCAACAGGGCAAGCTACTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: QPAQKSTPTPWGHSH*PVAVIKANRASYCG Trigger: TCCACAGTAGCTTGCCCTGTTGGCTTTGATAACAGCCACGGGGCAGTGGCTATGACCCCATGGAGTTGGGGTTGACTTCTGGGCTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
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| 3UTR GCA 90 bp | TGTGGCCTCAGAGCACAGAATGGCCTACACCTTCAAGGTGGTCAGTaGCTGACCCATGGGATCCTTCAACAGCTAGGGAGCCTGCTCATG | + |
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Preference number: 1 (lower is better) Translates to: CGLRAQNGLHLQGGQ*LTHGILQQLGSLLM Trigger: CATGAGCAGGCTCCCTAGCTGTTGAAGGATCCCATGGGTCAGGCACTGACCACCTTGAAGGTGTAGGCCATTCTGTGCTCTGAGGCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR GCA 90 bp | CACCTCTCTGGCAGTGGCAGGTGGGAACTCCCTCGGAGGACTGTTTaGACGAGCCTTCTCCCACTGCTCATGGATAGGTGTGATAATTCC | + |
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Preference number: 1 (lower is better) Translates to: HLSGSGRWELPRRTV*TSLLPLLMDRCDNS Trigger: GGAATTATCACACCTATCCATGAGCAGTGGGAGAAGGCTCGTGCAAACAGTCCTCCGAGGGAGTTCCCACCTGCCACTGCCAGAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | CATGGTCTGTGGCCTCAGAGCACAGAATGGCCTACACCTTCAAGGTaGTCAGTGCCTGACCCATGGGATCCTTCAACAGCTAGGGAGCCT | + |
|
Preference number: 1 (lower is better) Translates to: HGLWPQSTEWPTPSR*SVPDPWDPSTAREP Trigger: AGGCTCCCTAGCTGTTGAAGGATCCCATGGGTCAGGCACTGACCACCTTGAAGGTGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | GCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTGGCAGCTCCTaGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTTGAGGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: AHKNTDADGASGGSS*RVKGRLSCYILEAF Trigger: GAAGGCCTCAAGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | CTTGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTCCTCCTGGCTaGACCCATGTTCCTATGCTCTTGTCAGTCCCAGGAGGACATGAA | + |
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Preference number: 1 (lower is better) Translates to: LGHRLPKTKAPLPPG*THVPMLLSVPGGHE Trigger: TTCATGTCCTCCTGGGACTGACAAGAGCATAGGAACATGGGTCCAGCCAGGAGGAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | GACCTTCTTATATCACAGCCAGCCCAGAAGTCAACCCCAACTCCATaGGGTCATAGCCACTGCCCCGTGGCTGTTATCAAAGCCAACAGG | + |
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Preference number: 1 (lower is better) Translates to: DLLISQPAQKSTPTP*GHSHCPVAVIKANR Trigger: CCTGTTGGCTTTGATAACAGCCACGGGGCAGTGGCTATGACCCCATGGAGTTGGGGTTGACTTCTGGGCTGGCTGTGATATAAGAAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
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| 3UTR CCA 90 bp | GTTACATTCTTGAGGCCTTCACAGGTACATGTCATCGTAGCCCGGTaGGGGAAGATGGTCAGGGTTAGGTCCAGATGGGCTGGTCCCAAT | + |
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Preference number: 1 (lower is better) Translates to: VTFLRPSQVHVIVAR*GKMVRVRSRWAGPN Trigger: ATTGGGACCAGCCCATCTGGACCTAACCCTGACCATCTTCCCCCACCGGGCTACGATGACATGTACCTGTGAAGGCCTCAAGAATGTAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR TCA 90 bp | GGGCTGATGTTGCCGGAGTCTTCCTTGCAAGTGGGGAGGAGCTGGTaGTTGAGACACACTAATTTCTCCGTGGGACCTATATGCAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: GLMLPESSLQVGRSW*LRHTNFSVGPICSL Trigger: CAAGCTGCATATAGGTCCCACGGAGAAATTAGTGTGTCTCAATCACCAGCTCCTCCCCACTTGCAAGGAAGACTCCGGCAACATCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | AGGATGAAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATaGTCTGTGGCCTCAGAGCACAGAATGGCCTACACCTTCAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: RMKLMHNGRLVLVSA*SVASEHRMAYTFKV Trigger: CACCTTGAAGGTGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTCATCCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR TCA 90 bp | TGCCCTTGGGAGGAGATGGCAGTTTTTCTAGTGTGCCTGCTTTGGTaGAATCATCCTTGTGGCTCATGGATTCCAATCACACTTCCACCC | + |
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Preference number: 1 (lower is better) Translates to: CPWEEMAVFLVCLLW*NHPCGSWIPITLPP Trigger: GGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGATGATTTCACCAAAGCAGGCACACTAGAAAAACTGCCATCTCCTCCCAAGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR GCA 90 bp | CTCAAGGATGAAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTaGATGGTCTGTGGCCTCAGAGCACAGAATGGCCTACACCTTCAA | + |
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Preference number: 1 (lower is better) Translates to: LKDEVDAQWTSCPCL*MVCGLRAQNGLHLQ Trigger: TTGAAGGTGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTCATCCTTGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | TCCTTGTGGCTCATGGATTCCAATCACACTTCCACCCAGAAAGCCTaGGTGGGGCTCATCTTAGTGATGTCAGGAGCAAGAGTAACTTGT | + |
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Preference number: 1 (lower is better) Translates to: SLWLMDSNHTSTQKA*VGLILVMSGARVTC Trigger: ACAAGTTACTCTTGCTCCTGACATCACTAAGATGAGCCCCACCCAGGCTTTCTGGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | GATGGCAGTTTTTCTAGTGTGCCTGCTTTGGTGAAATCATCCTTGTaGCTCATGGATTCCAATCACACTTCCACCCAGAAAGCCTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: DGSFSSVPALVKSSL*LMDSNHTSTQKAWV Trigger: CACCCAGGCTTTCTGGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGATGATTTCACCAAAGCAGGCACACTAGAAAAACTGCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | GTGCCTGTCAGCTGGGGCTTCAAATATCTAGATAATTCTACAGATTaGGAGAGCTTGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: VPVSWGFKYLDNSTD*ESLDTGFQRQRLPF Trigger: GAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGTAGAATTATCTAGATATTTGAAGCCCCAGCTGACAGGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR TCA 90 bp | TGCTATGATTGTACAGCCATGGGGAATGTCGATGCTACAATCACATaGACAGTGAGGACAGAGAGTGGGAAATGCTGGACACACAGACCA | + |
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Preference number: 1 (lower is better) Translates to: CYDCTAMGNVDATIT*TVRTESGKCWTHRP Trigger: TGGTCTGTGTGTCCAGCATTTCCCACTCTCTGTCCTCACTGTTCATGTGATTGTAGCATCGACATTCCCCATGGCTGTACAATCATAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR CCA 90 bp | AAACAGGTTATAAAGTGCTATTTATTTACTGCAAAGGCTCCAGTCTaGAGGATCTATGGGACATACACTGAAACATTCCCTCTTGCTGTT | + |
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Preference number: 1 (lower is better) Translates to: KQVIKCYLFTAKAPV*RIYGTYTETFPLAV Trigger: AACAGCAAGAGGGAATGTTTCAGTGTATGTCCCATAGATCCTCCAGACTGGAGCCTTTGCAGTAAATAAATAGCACTTTATAACCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR GCA 90 bp | GCGACTGCATCGGGTGGAGGGCTGATGTTGCCGGAGTCTTCCTTGCAAGTGGGGGACAAGGGCTGGGGATaGAACCCCAGCAGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ATASGGGLMLPESSLQVGDKGWG*NPSRPA Trigger: TGCAGGCCTGCTGGGGTTGCATCCCCAGCCCTTGTC...CCCCACTTGCAAGGAAGACTCCGGCAACATCAGCCCTCCACCCGATGCAGTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCTCCGTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACCTCGGGACAAGGGCTGGGGATaGAACCCCAGCAGGCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: FLRGTYMQLGGVLQQAPRDKGWG*NPSRPA Trigger: TGCAGGCCTGCTGGGGTTGCATCCCCAGCCCTTGTC...CCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGACCGCGACTGCATCGGGTGGAGGGCTGATGTTGCCGGAGTCTTCCTTGCACCACCTCTCTGGCAGTaGCAGGTGGGAACTCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: CDRDCIGWRADVAGVFLAPPLWQ*QVGTPS Trigger: CGAGGGAGTTCCCACCTGCCACTGCCAGAGAGGTGG...TGCAAGGAAGACTCCGGCAACATCAGCCCTCCACCCGATGCAGTCGCGGTCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR-3UTR TCA 90 bp | CATGTCATCGTAGCCCGGTGGGGGAAGATGGTCAGGGTTAGGTCCAGATGGGCTCAGGCACCTCGGCTCTaGCAAGGGCTGGGGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: HVIVARWGKMVRVRSRWAQAPRL*QGLGMQ Trigger: TTGCATCCCCAGCCCTTGTCAGAGCCGAGGTGCCTG...AGCCCATCTGGACCTAACCCTGACCATCTTCCCCCACCGGGCTACGATGACATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR-3UTR GCA 90 bp | GACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTGGAGCCACAGCTTGGTGGGGTGCTaGAGCAGGCACCTCGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: DWPWSCQSSLSPHLSWSHSLVGC*SRHLGS Trigger: AGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCT...GTGGCTCCAGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTGAGACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTGGAGCCACACATGGTTaGGCTGCCGGCCATGGAACG | + |
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Preference number: 2 (lower is better) Translates to: LPETGPGPVSPVYLPIYPGATHG*AAGHGT Trigger: CGTTCCATGGCCGGCAGCCCAACCATGTGTGGCTCC...AGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTCTCAGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTGAGACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTCACACATGGTTGGGCTaGCGGCCATGGAACGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: LPETGPGPVSPVYLPIYPHTWLG*RPWNEA Trigger: CGCTTCGTTCCATGGCCGGCAGCCCAACCATGTGTG...AGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTCTCAGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | GGGATGCAACCCCAGCAGGCCTGCAAACACATGGGCAGAATCCTCTGCCCCAAGAGTGGTGGCAGCTCCTaGAGAGTAAAAGGGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: GMQPQQACKHMGRILCPKSGGSS*RVKGRL Trigger: CAGCCTCCCTTTTACTCTCCAGGAGCTGCCACCACT...CTTGGGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCTGCTGGGGTTGCATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTGAGACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTGTAGAGCACTGCCAGTaGCTGTCAGCTGGGGCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LPETGPGPVSPVYLPIYPVEHCQ*LSAGAS Trigger: TGAAGCCCCAGCTGACAGGCACTGGCAGTGCTCTAC...AGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTCTCAGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGACCGCGACTGCATCGGGTGGAGGGCTGATGTTGCCGGAGTCTTCCTTGCAGTGGGGAGGAGCTGGTaGTTGAGACACACTAATTTC | + |
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Preference number: 2 (lower is better) Translates to: CDRDCIGWRADVAGVFLAVGRSW*LRHTNF Trigger: GAAATTAGTGTGTCTCAATCACCAGCTCCTCCCCAC...TGCAAGGAAGACTCCGGCAACATCAGCCCTCCACCCGATGCAGTCGCGGTCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR-3UTR TCA 90 bp | GACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTGGAGCCACATCATGCCACCTCTCTaGCACCCAAAAGGGTCTAGG | + |
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Preference number: 2 (lower is better) Translates to: DWPWSCQSSLSPHLSWSHIMPPL*HPKGSR Trigger: CCTAGACCCTTTTGGGTGTCAGAGAGGTGGCATGAT...GTGGCTCCAGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | CTAATTTCTCCGTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACCCGGTGTGAGGAAATCTaGAGTGGGTCCACCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LISPWDLYAAWWGAAAGTRCEEI*SGSTSL Trigger: CAGAGAGGTGGACCCACTCCAGATTTCCTCACACCG...GGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAATTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | CTTGTCTCTGCATGGTCTGTGGCCTCAGAGCACAGAATGGCCTACACCTTCAAGTCCCCCGACAGCAAATaGGCTCAGGGGATCACGCCA | + |
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Preference number: 2 (lower is better) Translates to: LVSAWSVASEHRMAYTFKSPDSK*AQGITP Trigger: TGGCGTGATCCCCTGAGCCCATTTGCTGTCGGGGGA...CTTGAAGGTGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATCCTTGTGGCTCATGGATTCCAATCACACTTCCACCCAGAAAGCCTGGGTCAGGCACCTCGGCTCTaGCAAGGGCTGGGGATGCAA | + |
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Preference number: 2 (lower is better) Translates to: IILVAHGFQSHFHPESLGQAPRL*QGLGMQ Trigger: TTGCATCCCCAGCCCTTGTCAGAGCCGAGGTGCCTG...ACCCAGGCTTTCTGGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | CAAAATGCGTTCTGTTCTTATAGCGCTGTGACCGCGACTGCATCGGGTGGAGGGAGGCCTGCAAACACATaGGCAGAATCCTCTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QNAFCSYSAVTATASGGGRPANT*AESSAP Trigger: TGGGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCT...CCCTCCACCCGATGCAGTCGCGGTCACAGCGCTATAAGAACAGAACGCATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGATTGGGAGAGCTTGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTCCTCGACCTATATGCAGCTTaGTGGGGTGCTGCAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TDWESLDTGFQRQRLPFLDLYAA*WGAAAG Trigger: GCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTC...GAGGAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | AAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATGGTCTGTGGCCTCAGTCAAAGCGAGCTCCTaGGGGCACAGCACCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: KLMHNGRLVLVSAWSVASVKASS*GHSTRR Trigger: CCTCCTGGTGCTGTGCCCCCAGGAGCTCGCTTTGAC...TGAGGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGTCCTTGTCTCTGCATGGTCTGTGGCCTCAGAGCACAGAATGGCCTACAAGGGTTAGGTCCAGATaGGCTGGTCCCAATGGGTCC | + |
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Preference number: 2 (lower is better) Translates to: VLSLSLHGLWPQSTEWPTRVRSR*AGPNGS Trigger: GGACCCATTGGGACCAGCCCATCTGGACCTAACCCT...TGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAGGACAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATGGTCTGTGGCCTCACACACATGGTTGGGCTaGCGGCCATGGAACGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: KLMHNGRLVLVSAWSVASHTWLG*RPWNEA Trigger: CGCTTCGTTCCATGGCCGGCAGCCCAACCATGTGTG...TGAGGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGATTGGGAGAGCTTGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTCCTCAGGCCTGCAAACACATaGGCAGAATCCTCTGCCCCA | + |
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Preference number: 2 (lower is better) Translates to: TDWESLDTGFQRQRLPFLRPANT*AESSAP Trigger: TGGGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCT...GAGGAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCTGGAGGCACCATTCAAGGCTTCCCACATCTATGATACTGGGTTTCTTAGAGGAGCCACACATGGTTaGGCTGCCGGCCATGGAACG | + |
|
Preference number: 2 (lower is better) Translates to: FLEAPFKASHIYDTGFLRGATHG*AAGHGT Trigger: CGTTCCATGGCCGGCAGCCCAACCATGTGTGGCTCC...TCTAAGAAACCCAGTATCATAGATGTGGGAAGCCTTGAATGGTGCCTCCAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGATTGGGAGAGCTTGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTCCTCGTGTGCCTGCTTTGGTaGAATCATCCTTGTGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: TDWESLDTGFQRQRLPFLVCLLW*NHPCGS Trigger: TGAGCCACAAGGATGATTTCACCAAAGCAGGCACAC...GAGGAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | GTTCTGTTTATTCCTCTACTTACAGGCCACTGCAGCCCAGGGAGAGTCAACAGGGGAGAGTCAACAGGCTaGTCAGAGCAACTGGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VLFIPLLTGHCSPGRVNRGESTG*SEQLVE Trigger: CTCAACCAGTTGCTCTGAGCAGCCTGTTGACTCTCC...CCTGTTGACTCTCCCTGGGCTGCAGTGGCCTGTAAGTAGAGGAATAAACAGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGAAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATGGTCTGTGGCCCTACTTACAGGCCACTaGAGCCCAGGGAGAGTCAAC | + |
|
Preference number: 2 (lower is better) Translates to: MKLMHNGRLVLVSAWSVALLTGH*SPGRVN Trigger: GTTGACTCTCCCTGGGCTGCAGTGGCCTGTAAGTAG...GGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTCCCATCCACACAGCTCACTACAGAGCTCCAGTGAAGGCACCTCTGATTTCAGTGGTGGCAGCTCCTaGAGAGTAAAAGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: YSHPHSSLQSSSEGTSDFSGGSS*RVKGRL Trigger: CAGCCTCCCTTTTACTCTCCAGGAGCTGCCACCACT...GAAATCAGAGGTGCCTTCACTGGAGCTCTGTAGTGAGCTGTGTGGATGGGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGGAATGTCGATGCTACAATCACATGAACAGTGAGGACAGAGAGTGGGAAATGCTATATGCAGCTTGGTaGGGTGCTGCAGCAGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: GECRCYNHMNSEDREWEMLYAAW*GAAAGT Trigger: GGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAG...CATTTCCCACTCTCTGTCCTCACTGTTCATGTGATTGTAGCATCGACATTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTTGTCCTTGTCTCTGCATGGTCTGTGGCCTCAGAGCACAGAATGGCCTACAGTCAATAAGTACTCTTaGGAAGCCGGATCTCAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: VLSLSLHGLWPQSTEWPTVNKYS*EAGSQG Trigger: CCCCTGAGATCCGGCTTCCCAAGAGTACTTATTGAC...TGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAGGACAAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR CAA 90 bp | ACCAACAGAACCCAAACATCCACCTGCCAGCCCTCAAGGATGAAGTaGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATGGTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: TNRTQTSTCQPSRMK*MHNGRLVLVSAWSV Trigger: CACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTCATCCTTGAGGGCTGGCAGGTGGATGTTTGGGTTCTGTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGAGAAAGGACTTCTTTAGGGTCACTATGAAACTAGCCTACAGGTCTGTTCTGGACAAGGGCTGGGGATaGAACCCCAGCAGGCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KRKDFFRVTMKLAYRSVLDKGWG*NPSRPA Trigger: TGCAGGCCTGCTGGGGTTGCATCCCCAGCCCTTGTC...CAGAACAGACCTGTAGGCTAGTTTCATAGTGACCCTAAAGAAGTCCTTTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCATCTTAGTGATGTCAGGAGCAAGAGTAACTTGTGACTCGAGGGTGCTTGAGAGTGGTGGCAGCTCCTaGAGAGTAAAAGGGAGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: LILVMSGARVTCDSRVLESGGSS*RVKGRL Trigger: CAGCCTCCCTTTTACTCTCCAGGAGCTGCCACCACT...CTCAAGCACCCTCGAGTCACAAGTTACTCTTGCTCCTGACATCACTAAGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | AGACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTGGAGCCATTCTCCCACTGCTCATaGATAGGTGTGATAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: RLALVLSVQSISPSILEPFSHCS*IGVIIP Trigger: TGGAATTATCACACCTATCCATGAGCAGTGGGAGAA...TGGCTCCAGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGATTGGTGAGGATACAGAGAAACTGGAGCACTACCTCTGGTATGAAAATAGCGTAGAGCACTGCCAGTaGCTGTCAGCTGGGGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: RIGEDTEKLEHYLWYENSVEHCQ*LSAGAS Trigger: TGAAGCCCCAGCTGACAGGCACTGGCAGTGCTCTAC...GCTATTTTCATACCAGAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 90 bp | GGAGATGGCAGTTTTTCTAGTGTGCCTGCTTTGGTGAAATCATCCTaGTGGCTCATGGATTCCAATCACACTTCCACCCAGAAAGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GDGSFSSVPALVKSS*WLMDSNHTSTQKAW Trigger: CCAGGCTTTCTGGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGATGATTTCACCAAAGCAGGCACACTAGAAAAACTGCCATCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 90 bp | AGCATGCCCTTGGGAGGAGATGGCAGTTTTTCTAGTGTGCCTGCTTaGGTGAAATCATCCTTGTGGCTCATGGATTCCAATCACACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SMPLGGDGSFSSVPA*VKSSLWLMDSNHTS Trigger: GGAAGTGTGATTGGAATCCATGAGCCACAAGGATGATTTCACCAAAGCAGGCACACTAGAAAAACTGCCATCTCCTCCCAAGGGCATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 90 bp | AGCTGGGGCTTCAAATATCTAGATAATTCTACAGATTGGGAGAGCTaGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTCCTCCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: SWGFKYLDNSTDWES*DTGFQRQRLPFLLA Trigger: AGCCAGGAGGAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGTAGAATTATCTAGATATTTGAAGCCCCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGCCAGTGAAGATATTTCTTTTGGAGGAATCTGGGGTTGGATGCACAGCACTGCTGCTCAGAGCAACTaGTTGAGCATGCCCTTGGGA | + |
|
Preference number: 2 (lower is better) Translates to: IASEDISFGGIWGWMHSTAAQSN*LSMPLG Trigger: TCCCAAGGGCATGCTCAACCAGTTGCTCTGAGCAGC...AGTGCTGTGCATCCAACCCCAGATTCCTCCAAAAGAAATATCTTCACTGGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | AAACCAAACCAGTCCTTTCTCCAGAAACACTGCAGTTTGTCTGTAGAAAACAGAGACCTATATGCAGCTTaGTGGGGTGCTGCAGCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KPNQSFLQKHCSLSVENRDLYAA*WGAAAG Trigger: GCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTC...TCTGTTTTCTACAGACAAACTGCAGTGTTTCTGGAGAAAGGACTGGTTTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGCCAGTGAAGATATTTCTTTTGGAGGAATCTGGGGTTGGATGCACAGCACTAGTCCCAGGAGGACATaGAGAGCAGGTAATAGACAC | + |
|
Preference number: 2 (lower is better) Translates to: IASEDISFGGIWGWMHSTSPRRT*RAGNRH Trigger: GTGTCTATTACCTGCTCTTCATGTCCTCCTGGGACT...AGTGCTGTGCATCCAACCCCAGATTCCTCCAAAAGAAATATCTTCACTGGCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATGCAGTATCACACTCTTAAGAGTTTGTGCATTAACAAAAAGGAGCGTGGAATGCCGGAGTCTTCCTTaGAAGTGGGGAGGAGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LCSITLLRVCALTKRSVECRSLP*KWGGAG Trigger: ACCAGCTCCTCCCCACTTGCAAGGAAGACTCCGGCA...TTCCACGCTCCTTTTTGTTAATGCACAAACTCTTAAGAGTGTGATACTGCATAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGATTGGTGAGGATACAGAGAAACTGGAGCACTACCTCTGGTATGAAAATAGCTCTTGTCCTTGTCTCTaGATGGTCTGTGGCCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RIGEDTEKLEHYLWYENSSCPCL*MVCGLR Trigger: TCTGAGGCCACAGACCATGCAGAGACAAGGACAAGA...GCTATTTTCATACCAGAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACTTATAGGAACCAAACCAAACCAGTCCTTTCTCCAGAAACACTGCAGTTTGGAGACAAGTTCCAGCTaGTTGACAAGTTCCTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RLIGTKPNQSFLQKHCSLETSSS*LTSSWR Trigger: CCTCCAGGAACTTGTCAAGCAGCTGGAACTTGTCTC...CAAACTGCAGTGTTTCTGGAGAAAGGACTGGTTTGGTTTGGTTCCTATAAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR GCA 90 bp | AGACTTATAGGAACCAAACCAAACCAGTCCTTTCTCCAGAAACACTGCAGTTTGCGAGCCTTCTCCCACTaGTCATGGATAGGTGTGATA | + |
|
Preference number: 2 (lower is better) Translates to: RLIGTKPNQSFLQKHCSLRAFSH*SWIGVI Trigger: TATCACACCTATCCATGAGCAGTGGGAGAAGGCTCG...CAAACTGCAGTGTTTCTGGAGAAAGGACTGGTTTGGTTTGGTTCCTATAAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAAAGGAGCGTGGAAGACTGGCAACATGTATTCTGTATTGACATTTGGTTCGGAGGAGCTGGTGATTaGGACACACTAATTTCTCCG | + |
|
Preference number: 2 (lower is better) Translates to: TKRSVEDWQHVFCIDIWFGGAGD*DTLISP Trigger: CGGAGAAATTAGTGTGTCTCAATCACCAGCTCCTCC...GAACCAAATGTCAATACAGAATACATGTTGCCAGTCTTCCACGCTCCTTTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGATGTCACTTATGAAAACTATCCAAAATAGGCAAACAGACTGGAGGGTTGCCTGGGAGGAGGTTAAGTaGCAGAGACTGAGACAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VMSLMKTIQNRQTDWRVAWEEVK*QRLRQV Trigger: AACTTGTCTCAGTCTCTGTCACTTAACCTCCTCCCA...GGCAACCCTCCAGTCTGTTTGCCTATTTTGGATAGTTTTCATAAGTGACATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTTGTGCATTAACAAAAAGGAGCGTGGAAGACTGGCAACATGTATTCTGTATTGTGGGGAGGAGCTGGTaGTTGAGACACACTAATTTC | + |
|
Preference number: 2 (lower is better) Translates to: VCALTKRSVEDWQHVFCIVGRSW*LRHTNF Trigger: GAAATTAGTGTGTCTCAATCACCAGCTCCTCCCCAC...AATACAGAATACATGTTGCCAGTCTTCCACGCTCCTTTTTGTTAATGCACAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGTGAATCTTATTAGATGTCCGAAGGTCTCAGGAATTTCCCCCAGAGAAAAGGGGAGTGATTGCCAGTaGAGATATTTCTTTTGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TVNLIRCPKVSGISPREKGSDCQ*RYFFWR Trigger: CCTCCAAAAGAAATATCTTCACTGGCAATCACTCCC...CTTTTCTCTGGGGGAAATTCCTGAGACCTTCGGACATCTAATAAGATTCACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGATTGGTGAGGATACAGAGAAACTGGAGCACTACCTCTGGTATGAAAATATCCAGATACATTCAATaGCTTAAAAACTGCCCACGC | + |
|
Preference number: 2 (lower is better) Translates to: QGLVRIQRNWSTTSGMKISRYIQ*LKNCPR Trigger: GCGTGGGCAGTTTTTAAGTCATTGAATGTATCTGGA...TATTTTCATACCAGAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAATCCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGAAAGGACTTCTTTAGGGTCACTATGAAACTAGCCTACAGGTCTGTTCTGAGGAGCGTGGAAGACTaGCAACATGTATTCTGTATT | + |
|
Preference number: 2 (lower is better) Translates to: KRKDFFRVTMKLAYRSVLRSVED*QHVFCI Trigger: AATACAGAATACATGTTGCCAGTCTTCCACGCTCCT...CAGAACAGACCTGTAGGCTAGTTTCATAGTGACCCTAAAGAAGTCCTTTCTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTGTGAATCTTATTAGATGTCCGAAGGTCTCAGGAATTTCCCCCAGAGAAAAGGTGAAATCATCCTTGTaGCTCATGGATTCCAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: TVNLIRCPKVSGISPREKVKSSL*LMDSNH Trigger: GTGATTGGAATCCATGAGCCACAAGGATGATTTCAC...CTTTTCTCTGGGGGAAATTCCTGAGACCTTCGGACATCTAATAAGATTCACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGATTGGTGAGGATACAGAGAAACTGGAGCACTACCTCTGGTATGAAAATAGTGAAATCATCCTTGTaGCTCATGGATTCCAATCAC | + |
|
Preference number: 2 (lower is better) Translates to: QGLVRIQRNWSTTSGMKIVKSSL*LMDSNH Trigger: GTGATTGGAATCCATGAGCCACAAGGATGATTTCAC...TATTTTCATACCAGAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAATCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | GGTCCCAATGGGTCCAAAGGGGTCAAAGCGAGCTCCTaGGGGCACAGCACCAGGAGGAAGCCGGTTTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: GPNGSKGVKASS*GHSTRRKPVWE Trigger: CTCCCAAACCGGCTTCCTCCTGGTGCTGTGCCCCCAGGAGCTCGCTTTGACCCCTTTGGACCCATTGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | TTCTCCGTGGGACCTATATGCAGCTTGGTGGGGTGCTaGAGCAGGCACCTCGGCTCTGACAAGGGCTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: FSVGPICSLVGC*SRHLGSDKGWG Trigger: TCCCCAGCCCTTGTCAGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | GCCCGGTGGGGGAAGATGGTCAGGGTTAGGTCCAGATaGGCTGGTCCCAATGGGTCCAAAGGGGTCAAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: ARWGKMVRVRSR*AGPNGSKGVKA Trigger: CGCTTTGACCCCTTTGGACCCATTGGGACCAGCCCATCTGGACCTAACCCTGACCATCTTCCCCCACCGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | ATCCTTCAACAGCTAGGGAGCCTGCTCATGCTGGATTaGGCCCCAAGCCCAGCCTCCCTGAGACTGGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: ILQQLGSLLMLD*APSPASLRLAL Trigger: CAGGGCCAGTCTCAGGGAGGCTGGGCTTGGGGCTCAATCCAGCATGAGCAGGCTCCCTAGCTGTTGAAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | CTCAGGGGATCACGCCAAGCAGGCTGCCTGCTAGTATaGGGACGGTGTGAGGAAATCTGGAGTGGGTCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LRGSRQAGCLLV*GRCEEIWSGST Trigger: GGTGGACCCACTCCAGATTTCCTCACACCGTCCTCATACTAGCAGGCAGCCTGCTTGGCGTGATCCCCTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | CCCCAGCAGGCCTGCAAACACATGGGCAGAATCCTCTaGCCCAAGCCCACAAGAATACTGACGCTGATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: PQQACKHMGRIL*PKPTRILTLMG Trigger: CCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCTGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | TTACAGGCCACTGCAGCCCAGGGAGAGTCAACAGGCTaGTCAGAGCAACTGGTTGAGCATGCCCTTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LQATAAQGESTG*SEQLVEHALGR Trigger: CCTCCCAAGGGCATGCTCAACCAGTTGCTCTGAGCAGCCTGTTGACTCTCCCTGGGCTGCAGTGGCCTGTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | AATCTGGAGTGGGTCCACCTCTCTGGCAGTGGCAGGTaGGAACTCCCTCGGAGGACTGTTTGCACGAGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLEWVHLSGSGR*ELPRRTVCTSL Trigger: AAGGCTCGTGCAAACAGTCCTCCGAGGGAGTTCCCACCTGCCACTGCCAGAGAGGTGGACCCACTCCAGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | AGACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTGGAGCCATTGCCGGAGTCTTCCTaGCAAGTGGGGAGGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RLALVLSVQSISPSILEPLPESS*QVGRSW Trigger: CCAGCTCCTCCCCACTTGCAAGGAAGACTCCGGCAA...TGGCTCCAGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | ACGCCAAGCAGGCTGCCTGCTAGTATGAGGACGGTGTaGGGAAATCTGGAGTGGGTCCACCTCTCTGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: TPSRLPASMRTV*GNLEWVHLSGS Trigger: ACTGCCAGAGAGGTGGACCCACTCCAGATTTCCTCACACCGTCCTCATACTAGCAGGCAGCCTGCTTGGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | TGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTaGAGCCACACATGGTTGGGCTGCCGGCCATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: WSCQSSLSPHLS*SHTWLGCRPWN Trigger: GTTCCATGGCCGGCAGCCCAACCATGTGTGGCTCCAGGATAGATGGGGAGATAGACTGGACTGACAGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | CAGAAGTCAACCCCAACTCCATGGGGTCATAGCCACTaGCCCGTGGCTGTTATCAAAGCCAACAGGGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QKSTPTPWGHSH*PVAVIKANRAS Trigger: GCTTGCCCTGTTGGCTTTGATAACAGCCACGGGGCAGTGGCTATGACCCCATGGAGTTGGGGTTGACTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR CCA 72 bp | ACACTAATTTCTCCGTGGGACCTATATGCAGCTTGGTaGGGTGCTGCAGCAGGCACCTCGGCTCTGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: TLISPWDLYAAW*GAAAGTSALTR Trigger: CCTTGTCAGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAATTAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | GACACACTAATTTCTCCGTGGGACCTATATGCAGCTTaGTGGGGTGCTGCAGCAGGCACCTCGGCTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: DTLISPWDLYAA*WGAAAGTSALT Trigger: TGTCAGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAATTAGTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | CCTGGAACAGTACGCCATTGTGCTCTTCCAGCTTTATaGCACAGGGGTAGAGCACTGCCAGTGCCTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PGTVRHCALPAL*HRGRALPVPVS Trigger: GCTGACAGGCACTGGCAGTGCTCTACCCCTGTGCCATAAAGCTGGAAGAGCACAATGGCGTACTGTTCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | GTCTATCTCCCCATCTATCCTGGAGCCACACATGGTTaGGCTGCCGGCCATGGAACGAAGCGCTTGGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: VYLPIYPGATHG*AAGHGTKRLVL Trigger: AAGTACCAAGCGCTTCGTTCCATGGCCGGCAGCCCAACCATGTGTGGCTCCAGGATAGATGGGGAGATAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | TGGCCTACACCTTCAAGGTGGTCAGTGCCTGACCCATaGGATCCTTCAACAGCTAGGGAGCCTGCTCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: WPTPSRWSVPDP*DPSTAREPAHA Trigger: AGCATGAGCAGGCTCCCTAGCTGTTGAAGGATCCCATGGGTCAGGCACTGACCACCTTGAAGGTGTAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | TTGAGGCCTTCACAGGTACATGTCATCGTAGCCCGGTaGGGGAAGATGGTCAGGGTTAGGTCCAGATGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LRPSQVHVIVAR*GKMVRVRSRWA Trigger: AGCCCATCTGGACCTAACCCTGACCATCTTCCCCCACCGGGCTACGATGACATGTACCTGTGAAGGCCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAAAGCCTGGGTGGGGCTCATCTTAGTGATGTCAGGAGCAAGAGTAACTTGTTGCCGGAGTCTTCCTaGCAAGTGGGGAGGAGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PESLGGAHLSDVRSKSNLLPESS*QVGRSW Trigger: CCAGCTCCTCCCCACTTGCAAGGAAGACTCCGGCAA...CAAGTTACTCTTGCTCCTGACATCACTAAGATGAGCCCCACCCAGGCTTTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATGGTCTGTGGCCTCATGGAGCCACACATGGTaGGGCTGCCGGCCATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: KLMHNGRLVLVSAWSVASWSHTW*GCRPWN Trigger: GTTCCATGGCCGGCAGCCCAACCATGTGTGGCTCCA...TGAGGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATGGTCTGTGGCCCCTGCTCATGCTGGATaGAGCCCCAAGCCCAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: MKLMHNGRLVLVSAWSVAPAHAG*SPKPSL Trigger: GAGGCTGGGCTTGGGGCTCAATCCAGCATGAGCAGG...GGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | AGAGCACAGAATGGCCTACACCTTCAAGGTGGTCAGTaGCTGACCCATGGGATCCTTCAACAGCTAGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RAQNGLHLQGGQ*LTHGILQQLGS Trigger: GCTCCCTAGCTGTTGAAGGATCCCATGGGTCAGGCACTGACCACCTTGAAGGTGTAGGCCATTCTGTGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | AGGCTTCCAAAGACAAAGGCTCCCCTTCCTCCTGGCTaGACCCATGTTCCTATGCTCTTGTCAGTCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLPKTKAPLPPG*THVPMLLSVPG Trigger: TCCTGGGACTGACAAGAGCATAGGAACATGGGTCCAGCCAGGAGGAAGGGGAGCCTTTGTCTTTGGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | TTGTCTCTGCATGGTCTGTGGCCTCAGAGCACAGAATaGCCTACACCTTCAAGGTGGTCAGTGCCTGACCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSLHGLWPQSTE*PTPSRWSVPDP Trigger: TGGGTCAGGCACTGACCACCTTGAAGGTGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCTGAGACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTCGAAGCGCTTGGTACTaGATTTGGTGTCTCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPETGPGPVSPVYLPIYPRSAWY*IWCLLE Trigger: TTCCAGGAGACACCAAATCAAGTACCAAGCGCTTCG...AGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTCTCAGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACAAGTTCCTGGAGGCACCATTCAAGGCTTCCCACATCTATGATACTGGGTTGGAGCCACACATGGTaGGGCTGCCGGCCATGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LTSSWRHHSRLPTSMILGWSHTW*GCRPWN Trigger: GTTCCATGGCCGGCAGCCCAACCATGTGTGGCTCCA...ACCCAGTATCATAGATGTGGGAAGCCTTGAATGGTGCCTCCAGGAACTTGTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | CACCTGCCAGCCCTCAAGGATGAAGTTGATGCACAATaGACGTCTTGTCCTTGTCTCTGCATGGTCTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLPALKDEVDAQ*TSCPCLCMVCG Trigger: GCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTCATCCTTGAGGGCTGGCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | ATATCACAGCCAGCCCAGAAGTCAACCCCAACTCCATaGGGTCATAGCCACTGCCCCGTGGCTGTTATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ISQPAQKSTPTP*GHSHCPVAVIK Trigger: TTTGATAACAGCCACGGGGCAGTGGCTATGACCCCATGGAGTTGGGGTTGACTTCTGGGCTGGCTGTGATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR-3UTR CAA 90 bp | AGACTGGCCCTGGTCCTGTCAGTCCAGTCTATCTCCCCATCTATCCTGGAGCCACGCTTGGTACTTGATTaGGTGTCTCCTGGAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RLALVLSVQSISPSILEPRLVLD*VSPGTV Trigger: TACTGTTCCAGGAGACACCAAATCAAGTACCAAGCG...TGGCTCCAGGATAGATGGGGAGATAGACTGGACTGACAGGACCAGGGCCAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | AGGTCTGTTCTGTTTATTCCTCTACTTACAGGCCACTaGAGCCCAGGGAGAGTCAACAGGCTGCTCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RSVLFIPLLTGH*SPGRVNRLLRA Trigger: TGCTCTGAGCAGCCTGTTGACTCTCCCTGGGCTGCAGTGGCCTGTAAGTAGAGGAATAAACAGAACAGACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | AATACTGACGCTGATGGGGCCAGTGGTGGCAGCTCCTaGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: NTDADGASGGSS*RVKGRLSCYIL Trigger: AAGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACCACTGGCCCCATCAGCGTCAGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | TTGATGCACAATGGACGTCTTGTCCTTGTCTCTGCATaGTCTGTGGCCTCAGAGCACAGAATGGCCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: LMHNGRLVLVSA*SVASEHRMAYT Trigger: GGTGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGATTGGGAGAGCTTGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTCCTCCGAAGCGCTTGGTACTaGATTTGGTGTCTCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TDWESLDTGFQRQRLPFLRSAWY*IWCLLE Trigger: TTCCAGGAGACACCAAATCAAGTACCAAGCGCTTCG...GAGGAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | GAAGTTGATGCACAATGGACGTCTTGTCCTTGTCTCTaGATGGTCTGTGGCCTCAGAGCACAGAATGGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: EVDAQWTSCPCL*MVCGLRAQNGL Trigger: TAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | TCCCTCGGAGGACTGTTTGCACGAGCCTTCTCCCACTaGTCATGGATAGGTGTGATAATTCCAGATCTGATC | + |
|
Preference number: 3 (lower is better) Translates to: SLGGLFARAFSH*SWIGVIIPDLI Trigger: GATCAGATCTGGAATTATCACACCTATCCATGAGCAGTGGGAGAAGGCTCGTGCAAACAGTCCTCCGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | CTCATGGATTCCAATCACACTTCCACCCAGAAAGCCTaGGTGGGGCTCATCTTAGTGATGTCAGGAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LMDSNHTSTQKA*VGLILVMSGAR Trigger: TCTTGCTCCTGACATCACTAAGATGAGCCCCACCCAGGCTTTCTGGGTGGAAGTGTGATTGGAATCCATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | AGGTACCCAGTTACCAACAGAACCCAAACATCCACCTaGCAGCCCTCAAGGATGAAGTTGATGCACAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: RYPVTNRTQTST*QPSRMKLMHNG Trigger: TCCATTGTGCATCAACTTCATCCTTGAGGGCTGGCAGGTGGATGTTTGGGTTCTGTTGGTAACTGGGTACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | TGGCACAGGGGTAGAGCACTGCCAGTGCCTGTCAGCTaGGGCTTCAAATATCTAGATAATTCTACAGATTGG | + |
|
Preference number: 3 (lower is better) Translates to: WHRGRALPVPVS*GFKYLDNSTDW Trigger: CCAATCTGTAGAATTATCTAGATATTTGAAGCCCCAGCTGACAGGCACTGGCAGTGCTCTACCCCTGTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATGTCACTTATGAAAACTATCCAAAATAGGCAAACAGACTGGAGGGTTGCCGGTGGAGGGCTGATGTaGCCGGAGTCTTCCTTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VMSLMKTIQNRQTDWRVAGGGLM*PESSLQ Trigger: TTGCAAGGAAGACTCCGGCAACATCAGCCCTCCACC...GGCAACCCTCCAGTCTGTTTGCCTATTTTGGATAGTTTTCATAAGTGACATCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGACAAGTTCCTGGAGGCACCATTCAAGGCTTCCCACATCTATGATACTGGGTCATGTTCCTATGCTCTaGTCAGTCCCAGGAGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: LTSSWRHHSRLPTSMILGHVPML*SVPGGH Trigger: ATGTCCTCCTGGGACTGACAAGAGCATAGGAACATG...ACCCAGTATCATAGATGTGGGAAGCCTTGAATGGTGCCTCCAGGAACTTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGAATGTCGATGCTACAATCACATGAACAGTGAGGACAGAGAGTGGGAAATGTGCACAATGGACGTCTaGTCCTTGTCTCTGCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GECRCYNHMNSEDREWEMCTMDV*SLSLHG Trigger: ACCATGCAGAGACAAGGACAAGACGTCCATTGTGCA...CATTTCCCACTCTCTGTCCTCACTGTTCATGTGATTGTAGCATCGACATTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | TGTACAGCCATGGGGAATGTCGATGCTACAATCACATaGACAGTGAGGACAGAGAGTGGGAAATGCTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: CTAMGNVDATIT*TVRTESGKCWT Trigger: TGTCCAGCATTTCCCACTCTCTGTCCTCACTGTTCATGTGATTGTAGCATCGACATTCCCCATGGCTGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | GGGTACAAGCAAGGATTGGTGAGGATACAGAGAAACTaGAGCACTACCTCTGGTATGAAAATAGCGTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GYKQGLVRIQRN*STTSGMKIAWL Trigger: CAGCCACGCTATTTTCATACCAGAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAATCCTTGCTTGTACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCCAGTGAAGATATTTCTTTTGGAGGAATCTGGGGTTGGATGCACAGCACTTGGTTGAGCATGCCCTaGGGAGGAGATGGCAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: IASEDISFGGIWGWMHSTWLSMP*GGDGSF Trigger: AAAACTGCCATCTCCTCCCAAGGGCATGCTCAACCA...AGTGCTGTGCATCCAACCCCAGATTCCTCCAAAAGAAATATCTTCACTGGCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAGATTGGGAGAGCTTGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTCCTCCACACTCTTAAGAGTTaGTGCATTAACAAAAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TDWESLDTGFQRQRLPFLHTLKS*CINKKE Trigger: CTCCTTTTTGTTAATGCACAAACTCTTAAGAGTGTG...GAGGAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | GCCAGTGAAGATATTTCTTTTGGAGGAATCTGGGGTTaGATGCACAGCACTGTGAATATCTCCCAACCCACT | + |
|
Preference number: 3 (lower is better) Translates to: ASEDISFGGIWG*MHSTVNISQPT Trigger: AGTGGGTTGGGAGATATTCACAGTGCTGTGCATCCAACCCCAGATTCCTCCAAAAGAAATATCTTCACTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTGCCAGTGAAGATATTTCTTTTGGAGGAATCTGGGGTTGGATGCACAGCACTTCTAGTGTGCCTGCTTaGGTGAAATCATCCTTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: IASEDISFGGIWGWMHSTSSVPA*VKSSLW Trigger: CCACAAGGATGATTTCACCAAAGCAGGCACACTAGA...AGTGCTGTGCATCCAACCCCAGATTCCTCCAAAAGAAATATCTTCACTGGCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGAAAGGACTTCTTTAGGGTCACTATGAAACTAGCCTACAGGTCTGTTCTGACAGATTGGGAGAGCTaGGACACAGGCTTCCAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: KRKDFFRVTMKLAYRSVLTDWES*DTGFQR Trigger: TCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGT...CAGAACAGACCTGTAGGCTAGTTTCATAGTGACCCTAAAGAAGTCCTTTCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | GAGGAGATGGCAGTTTTTCTAGTGTGCCTGCTTTGGTaGAATCATCCTTGTGGCTCATGGATTCCAATCACA | + |
|
Preference number: 3 (lower is better) Translates to: EEMAVFLVCLLW*NHPCGSWIPIT Trigger: TGTGATTGGAATCCATGAGCCACAAGGATGATTTCACCAAAGCAGGCACACTAGAAAAACTGCCATCTCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | CTTGACATCACTAGTTTGGGTACAAGCAAGGATTGGTaGGGATACAGAGAAACTGGAGCACTACCTCTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LDITSLGTSKDW*GYRETGALPLV Trigger: TACCAGAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAATCCTTGCTTGTACCCAAACTAGTGATGTCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | AGCTGGGGCTTCAAATATCTAGATAATTCTACAGATTaGGAGAGCTTGGACACAGGCTTCCAAAGACAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SWGFKYLDNSTD*ESLDTGFQRQR Trigger: CCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGTAGAATTATCTAGATATTTGAAGCCCCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | GTGATTGCCAGTGAAGATATTTCTTTTGGAGGAATCTaGGGTTGGATGCACAGCACTGTGAATATCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VIASEDISFGGI*GWMHSTVNISQ Trigger: TTGGGAGATATTCACAGTGCTGTGCATCCAACCCCAGATTCCTCCAAAAGAAATATCTTCACTGGCAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | ATTGGTGAGGATACAGAGAAACTGGAGCACTACCTCTaGTATGAAAATAGCGTGGCTGTTTTGGGAAACACT | + |
|
Preference number: 3 (lower is better) Translates to: IGEDTEKLEHYL*YENSVAVLGNT Trigger: AGTGTTTCCCAAAACAGCCACGCTATTTTCATACCAGAGGTAGTGCTCCAGTTTCTCTGTATCCTCACCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | AGAGAGTGGGAAATGCTGGACACACAGACCACACACTaGGTGATGTCACTTATGAAAACTATCCAAAATAGG | + |
|
Preference number: 3 (lower is better) Translates to: REWEMLDTQTTH*VMSLMKTIQNR Trigger: CCTATTTTGGATAGTTTTCATAAGTGACATCACTCAGTGTGTGGTCTGTGTGTCCAGCATTTCCCACTCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | CGTAGTCCTATGCAGTATCACACTCTTAAGAGTTTGTaGATTAACAAAAAGGAGCGTGGAAGACTGGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: RSPMQYHTLKSL*INKKERGRLAT Trigger: TGTTGCCAGTCTTCCACGCTCCTTTTTGTTAATGCACAAACTCTTAAGAGTGTGATACTGCATAGGACTACG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR GCA 72 bp | GTTATCAAAGCCAACAGGGCAAGCTACTGTGGACTCTaGTCTGCATGGTCTTGGTCAAATTTTTCCATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIKANRASYCGL*SAWSWSNFSIK Trigger: TTTAATGGAAAAATTTGACCAAGACCATGCAGAGCAGAGTCCACAGTAGCTTGCCCTGTTGGCTTTGATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR CCA 72 bp | ATCAGGGTCCAAGTTATCTACATTCCCAAACCTATCTaGAGAATTCTAGCCACTGTTCCTTTAATGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: IRVQVIYIPKPI*RILATVPLMLP Trigger: AGGAAGCATTAAAGGAACAGTGGCTAGAATTCTCCAGATAGGTTTGGGAATGTAGATAACTTGGACCCTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | ATAAAGTGCTATTTATTTACTGCAAAGGCTCCAGTCTaGAGGATCTATGGGACATACACTGAAACATTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: IKCYLFTAKAPV*RIYGTYTETFP Trigger: AGGGAATGTTTCAGTGTATGTCCCATAGATCCTCCAGACTGGAGCCTTTGCAGTAAATAAATAGCACTTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CCA 72 bp | ACAATACAAACAAGATATGACTTGACATCACTAGTTTaGGTACAAGCAAGGATTGGTGAGGATACAGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: TIQTRYDLTSLV*VQARIGEDTEK Trigger: TTTCTCTGTATCCTCACCAATCCTTGCTTGTACCCAAACTAGTGATGTCAAGTCATATCTTGTTTGTATTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR TCA 72 bp | AAAAACAAAAGCAAATGGGACAATACAAACAAGATATaGCTTGACATCACTAGTTTGGGTACAAGCAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: KNKSKWDNTNKI*LDITSLGTSKD Trigger: ATCCTTGCTTGTACCCAAACTAGTGATGTCAAGTCATATCTTGTTTGTATTGTCCCATTTGCTTTTGTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 72 bp | GCTGTGACCGCGACTGCATCGGGTGGAGGGCTGATGTaGCCGGAGTCTTCCTTGCAAGTGGGGAGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AVTATASGGGLM*PESSLQVGRSW Trigger: CCAGCTCCTCCCCACTTGCAAGGAAGACTCCGGCAACATCAGCCCTCCACCCGATGCAGTCGCGGTCACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTGGCAGCTCCTGGGTCAAAGCGAGCTCCTaGGGGCACAGCACCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PQAHKNTDADGASGGSSWVKASS*GHSTRR Trigger: CCTCCTGGTGCTGTGCCCCCAGGAGCTCGCTTTGAC...CCAGGAGCTGCCACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GCGACTGCATCGGGTGGAGGGCTGATGTTGCCGGAGTCTTCCTTGCAAGTGGGGTCCCCCGACAGCAAATaGGCTCAGGGGATCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ATASGGGLMLPESSLQVGSPDSK*AQGITP Trigger: TGGCGTGATCCCCTGAGCCCATTTGCTGTCGGGGGA...CCCCACTTGCAAGGAAGACTCCGGCAACATCAGCCCTCCACCCGATGCAGTCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | CATGGGCAGAATCCTCTGCCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCCCACCTCTCTGGCAGTaGCAGGTGGGAACTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: HGQNPLPQAHKNTDADGAPPLWQ*QVGTPS Trigger: CGAGGGAGTTCCCACCTGCCACTGCCAGAGAGGTGG...GGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATTCTGCCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGGATGCAACCCCAGCAGGCCTGCAAACACATGGGCAGAATCCTCTGCCCGTCATCGTAGCCCGGTaGGGGAAGATGGTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: AGDATPAGLQTHGQNPLPVIVAR*GKMVRV Trigger: AACCCTGACCATCTTCCCCCACCGGGCTACGATGAC...GGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCTGCTGGGGTTGCATCCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACCTCGGCTCTGACGTCAAGTCTGCCACCTaGTGTGTGCCAAGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGPICSLVGCCSRHLGSDVKSAT*CVPSSS Trigger: GCTGGAACTTGGCACACAGCAGGTGGCAGACTTGAC...GTCAGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTGGCAGCTCCTGGGTTCAGGGTCAAGTCTaGCACCTGCTGTGTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQAHKNTDADGASGGSSWVQGQV*HLLCAK Trigger: CTTGGCACACAGCAGGTGGCAGACTTGACCCTGAAC...CCAGGAGCTGCCACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | TGTGACCGCGACTGCATCGGGTGGAGGGCTGATGTTGCCGGAGTCTTCCTTGCAAGGGTTAGGTCCAGATaGGCTGGTCCCAATGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CDRDCIGWRADVAGVFLARVRSR*AGPNGS Trigger: GGACCCATTGGGACCAGCCCATCTGGACCTAACCCT...TGCAAGGAAGACTCCGGCAACATCAGCCCTCCACCCGATGCAGTCGCGGTCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCCGTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACCTCGGGTCATCGTAGCCCGGTaGGGGAAGATGGTCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRGTYMQLGGVLQQAPRVIVAR*GKMVRV Trigger: AACCCTGACCATCTTCCCCCACCGGGCTACGATGAC...CCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR TCA 90 bp | GTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACCTCGGCTCTGACAGTATGAGGACGGTGTaGGGAAATCTGGAGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VGPICSLVGCCSRHLGSDSMRTV*GNLEWV Trigger: GACCCACTCCAGATTTCCTCACACCGTCCTCATACT...GTCAGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGCAACCCCAGCAGGCCTGCAAACACATGGGCAGAATCCTCTGCCCCAAGATGGGCTGGTCCCAATaGGTCCAAAGGGGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GMQPQQACKHMGRILCPKMGWSQ*VQRGQS Trigger: GCTTTGACCCCTTTGGACCCATTGGGACCAGCCCAT...CTTGGGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCTGCTGGGGTTGCATCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTCTGCCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTGGCCCCGGTGGGGGAAGATaGTCAGGGTTAGGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPLPQAHKNTDADGASGGPGGGR*SGLGPD Trigger: ATCTGGACCTAACCCTGACCATCTTCCCCCACCGGG...GCCACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTCCGTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACCTCGGATCATGCCACCTCTCTaGCACCCAAAAGGGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: FLRGTYMQLGGVLQQAPRIMPPL*HPKGSR Trigger: CCTAGACCCTTTTGGGTGTCAGAGAGGTGGCATGAT...CCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR TCA 90 bp | GGCAGAATCCTCTGCCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGCCGGTTTGGGAGGCCTaGGGATGGGTCAATAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GRILCPKPTRILTLMGPVPVWEA*GWVNKY Trigger: GTACTTATTGACCCATCCTCAGGCCTCCCAAACCGG...CACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR GCA 90 bp | TATAGCGCTGTGACCGCGACTGCATCGGGTGGAGGGCTGATGTTGCCGGAGTCTGGGGATCCACAATCATaGCACCTCTCTGACACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: YSAVTATASGGGLMLPESGDPQS*HLSDTQ Trigger: TTGGGTGTCAGAGAGGTGGCATGATTGTGGATCCCC...AGACTCCGGCAACATCAGCCCTCCACCCGATGCAGTCGCGGTCACAGCGCTATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGAATCCTCTGCCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGCGGTGTGAGGAAATCTaGAGTGGGTCCACCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRILCPKPTRILTLMGPVRCEEI*SGSTSL Trigger: CAGAGAGGTGGACCCACTCCAGATTTCCTCACACCG...CACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATGCGTTCTGTTCTTATAGCGCTGTGACCGCGACTGCATCGGGTGGAGGGTCCCCCGACAGCAAATaGGCTCAGGGGATCACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QNAFCSYSAVTATASGGGSPDSK*AQGITP Trigger: TGGCGTGATCCCCTGAGCCCATTTGCTGTCGGGGGA...CCCTCCACCCGATGCAGTCGCGGTCACAGCGCTATAAGAACAGAACGCATTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACCTCGGCTCTGACGTCAATAAGTACTCTTaGGAAGCCGGATCTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VGPICSLVGCCSRHLGSDVNKYS*EAGSQG Trigger: CCCCTGAGATCCGGCTTCCCAAGAGTACTTATTGAC...GTCAGAGCCGAGGTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | ATCCTCTGCCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTGGCAATGGGCTGGTCCCAATaGGTCCAAAGGGGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ILCPKPTRILTLMGPVVAMGWSQ*VQRGQS Trigger: GCTTTGACCCCTTTGGACCCATTGGGACCAGCCCAT...TGCCACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR GCA 90 bp | CAGAATCCTCTGCCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTGTCAAGTCTGCCACCTaGTGTGTGCCAAGTTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QNPLPQAHKNTDADGASGVKSAT*CVPSSS Trigger: GCTGGAACTTGGCACACAGCAGGTGGCAGACTTGAC...ACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GGCCAGTGGTGGCAGCTCCTGGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTAGGGTTAGGTCCAGATaGGCTGGTCCCAATGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GQWWQLLESKREAELLHSRVRSR*AGPNGS Trigger: GGACCCATTGGGACCAGCCCATCTGGACCTAACCCT...AGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACCACTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR TCA 90 bp | CAGAATCCTCTGCCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTAGTATGAGGACGGTGTaGGGAAATCTGGAGTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QNPLPQAHKNTDADGASGSMRTV*GNLEWV Trigger: GACCCACTCCAGATTTCCTCACACCGTCCTCATACT...ACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGGCAGAGGATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAGCTCCTGGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTTGAGGCCCGGTGTGAGGAAATCTaGAGTGGGTCCACCTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSWRVKGRLSCYILEARCEEI*SGSTSL Trigger: CAGAGAGGTGGACCCACTCCAGATTTCCTCACACCG...GGCCTCAAGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | ATCATCCTTGTGGCTCATGGATTCCAATCACACTTCCACCCAGAAAGCCTGGGTGTCAAAGCGAGCTCCTaGGGGCACAGCACCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IILVAHGFQSHFHPESLGVKASS*GHSTRR Trigger: CCTCCTGGTGCTGTGCCCCCAGGAGCTCGCTTTGAC...ACCCAGGCTTTCTGGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| CDS-3UTR CCA 90 bp | CTCATCTTAGTGATGTCAGGAGCAAGAGTAACTTGTGACTCGAGGGTGCTTGAGCCACCTCTCTGGCAGTaGCAGGTGGGAACTCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LILVMSGARVTCDSRVLEPPLWQ*QVGTPS Trigger: CGAGGGAGTTCCCACCTGCCACTGCCAGAGAGGTGG...CTCAAGCACCCTCGAGTCACAAGTTACTCTTGCTCCTGACATCACTAAGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR CAA 72 bp | CAACAGGCTGCTCAGAGCAACTGGTTGAGCATGCCCTaGGGAGGAGATGGCAGTTTTTCTAGTGTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QQAAQSNWLSMP*GGDGSFSSVPA Trigger: AGCAGGCACACTAGAAAAACTGCCATCTCCTCCCAAGGGCATGCTCAACCAGTTGCTCTGAGCAGCCTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 72 bp | CCCCTTCCTCCTGGCTGGACCCATGTTCCTATGCTCTaGTCAGTCCCAGGAGGACATGAAGAGCAGGTAATA | + |
|
Preference number: 4 (lower is better) Translates to: PLPPGWTHVPML*SVPGGHEEQVI Trigger: TATTACCTGCTCTTCATGTCCTCCTGGGACTGACAAGAGCATAGGAACATGGGTCCAGCCAGGAGGAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| CDS-3UTR GCA 90 bp | GTTCTGTTTATTCCTCTACTTACAGGCCACTGCAGCCCAGGGAGAGTCAACAGGGTTCAGGGTCAAGTCTaGCACCTGCTGTGTGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLFIPLLTGHCSPGRVNRVQGQV*HLLCAK Trigger: CTTGGCACACAGCAGGTGGCAGACTTGACCCTGAAC...CCTGTTGACTCTCCCTGGGCTGCAGTGGCCTGTAAGTAGAGGAATAAACAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| CDS-3UTR GCA 90 bp | GGTGGCAGCTCCTGGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTTGAGGCCCGAGCCTTCTCCCACTaGTCATGGATAGGTGTGATA | + |
|
Preference number: 4 (lower is better) Translates to: GGSSWRVKGRLSCYILEARAFSH*SWIGVI Trigger: TATCACACCTATCCATGAGCAGTGGGAGAAGGCTCG...GGCCTCAAGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GGGATGCAACCCCAGCAGGCCTGCAAACACATGGGCAGAATCCTCTGCCCCAAGTTCTCCCACTGCTCATaGATAGGTGTGATAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GMQPQQACKHMGRILCPKFSHCS*IGVIIP Trigger: TGGAATTATCACACCTATCCATGAGCAGTGGGAGAA...CTTGGGGCAGAGGATTCTGCCCATGTGTTTGCAGGCCTGCTGGGGTTGCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGCAGCTCCTGGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTTGAGGCCGTCAATAAGTACTCTTaGGAAGCCGGATCTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGSSWRVKGRLSCYILEAVNKYS*EAGSQG Trigger: CCCCTGAGATCCGGCTTCCCAAGAGTACTTATTGAC...GGCCTCAAGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR TCA 90 bp | ATCATCCTTGTGGCTCATGGATTCCAATCACACTTCCACCCAGAAAGCCTGGGTCCGGTTTGGGAGGCCTaGGGATGGGTCAATAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IILVAHGFQSHFHPESLGPVWEA*GWVNKY Trigger: GTACTTATTGACCCATCCTCAGGCCTCCCAAACCGG...ACCCAGGCTTTCTGGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGATGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| CDS-3UTR CCA 90 bp | CTCATCTTAGTGATGTCAGGAGCAAGAGTAACTTGTGACTCGAGGGTGCTTGAGCCCGGTGGGGGAAGATaGTCAGGGTTAGGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LILVMSGARVTCDSRVLEPGGGR*SGLGPD Trigger: ATCTGGACCTAACCCTGACCATCTTCCCCCACCGGG...CTCAAGCACCCTCGAGTCACAAGTTACTCTTGCTCCTGACATCACTAAGATGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR CAA 72 bp | ACCCAAACATCCACCTGCCAGCCCTCAAGGATGAAGTaGATGCACAATGGACGTCTTGTCCTTGTCTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQTSTCQPSRMK*MHNGRLVLVSA Trigger: TGCAGAGACAAGGACAAGACGTCCATTGTGCATCAACTTCATCCTTGAGGGCTGGCAGGTGGATGTTTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAAAGGAGCGTGGAAGACTGGCAACATGTATTCTGTATTGACATTTGGTTCGTGGGTCCACCTCTCTaGCAGTGGCAGGTGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: TKRSVEDWQHVFCIDIWFVGPPL*QWQVGT Trigger: AGTTCCCACCTGCCACTGCCAGAGAGGTGGACCCAC...GAACCAAATGTCAATACAGAATACATGTTGCCAGTCTTCCACGCTCCTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR CAA 72 bp | AGTTTTTCTAGTGTGCCTGCTTTGGTGAAATCATCCTaGTGGCTCATGGATTCCAATCACACTTCCACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SFSSVPALVKSS*WLMDSNHTSTQ Trigger: CTGGGTGGAAGTGTGATTGGAATCCATGAGCCACAAGGATGATTTCACCAAAGCAGGCACACTAGAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 72 bp | TTGGGAGGAGATGGCAGTTTTTCTAGTGTGCCTGCTTaGGTGAAATCATCCTTGTGGCTCATGGATTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGGDGSFSSVPA*VKSSLWLMDSN Trigger: ATTGGAATCCATGAGCCACAAGGATGATTTCACCAAAGCAGGCACACTAGAAAAACTGCCATCTCCTCCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 72 bp | TCCCGTAGTCCTATGCAGTATCACACTCTTAAGAGTTaGTGCATTAACAAAAAGGAGCGTGGAAGACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRSPMQYHTLKS*CINKKERGRLA Trigger: TGCCAGTCTTCCACGCTCCTTTTTGTTAATGCACAAACTCTTAAGAGTGTGATACTGCATAGGACTACGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| 3UTR CAA 72 bp | TTCAAATATCTAGATAATTCTACAGATTGGGAGAGCTaGGACACAGGCTTCCAAAGACAAAGGCTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FKYLDNSTDWES*DTGFQRQRLPF Trigger: GAAGGGGAGCCTTTGTCTTTGGAAGCCTGTGTCCAAGCTCTCCCAATCTGTAGAATTATCTAGATATTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| CDS-3UTR CCA 90 bp | GTGATGTCACTTATGAAAACTATCCAAAATAGGCAAACAGACTGGAGGGTTGCCTTCTCCCACTGCTCATaGATAGGTGTGATAATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VMSLMKTIQNRQTDWRVAFSHCS*IGVIIP Trigger: TGGAATTATCACACCTATCCATGAGCAGTGGGAGAA...GGCAACCCTCCAGTCTGTTTGCCTATTTTGGATAGTTTTCATAAGTGACATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| 3UTR CAA 72 bp | ACAAAAGCAAATGGGACAATACAAACAAGATATGACTaGACATCACTAGTTTGGGTACAAGCAAGGATTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TKANGTIQTRYD*TSLVWVQARIG Trigger: ACCAATCCTTGCTTGTACCCAAACTAGTGATGTCAAGTCATATCTTGTTTGTATTGTCCCATTTGCTTTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAAGCCCACAAGAATACTGACGCTGATGGGGCCAGTGGTGGCAGCTCCTGGAGGCATAGTAGCCGTTaGTCACCACTTCCCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQAHKNTDADGASGGSSWRHSSR*SPLPSA Trigger: TGCACTGGGAAGTGGTGACAAACGGCTACTATGCCT...CCAGGAGCTGCCACCACTGGCCCCATCAGCGTCAGTATTCTTGTGGGCTTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGCAGCTCCTGGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTTGAGGCCCAGGAGGAAGCCGGTTaGGGAGGCCTGAGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GGSSWRVKGRLSCYILEAQEEAG*GGLRMG Trigger: ACCCATCCTCAGGCCTCCCAAACCGGCTTCCTCCTG...GGCCTCAAGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CAA 90 bp | CTTGTCTCTGCATGGTCTGTGGCCTCAGAGCACAGAATGGCCTACACCTTCAAGCAGGAGGAAGCCGGTTaGGGAGGCCTGAGGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVSAWSVASEHRMAYTFKQEEAG*GGLRMG Trigger: ACCCATCCTCAGGCCTCCCAAACCGGCTTCCTCCTG...CTTGAAGGTGTAGGCCATTCTGTGCTCTGAGGCCACAGACCATGCAGAGACAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
||
| CDS GCA 90 bp | GCAGTAGTTCTGATTTCTTATCACTGGGACCTGGCTGGTCGCCCGTaGCCAAGGCATAGTAGCCGTTTGTCACCACTTCCCAGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVVLISYHWDLAGRP*PRHSSRLSPLPSAG Trigger: TCCTGCACTGGGAAGTGGTGACAAACGGCTACTATGCCTTGGGCACGGGCGACCAGCCAGGTCCCAGTGATAAGAAATCAGAACTACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
||
| CDS-3UTR CAA 90 bp | ACTAATTTCTCCGTGGGACCTATATGCAGCTTGGTGGGGTGCTGCAGCAGGCACAGGCATAGTAGCCGTTaGTCACCACTTCCCAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TNFSVGPICSLVGCCSRHRHSSR*SPLPSA Trigger: TGCACTGGGAAGTGGTGACAAACGGCTACTATGCCT...GTGCCTGCTGCAGCACCCCACCAAGCTGCATATAGGTCCCACGGAGAAATTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGCAGCTCCTGGAGAGTAAAAGGGAGGCTGAGCTGTTACATTCTTGAGGCCCCAAGTTCCAGCACGTaGATGATCATGCCGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGSSWRVKGRLSCYILEAPSSST*MIMPFS Trigger: GGAGAACGGCATGATCATCAACGTGCTGGAACTTGG...GGCCTCAAGAATGTAACAGCTCAGCCTCCCTTTTACTCTCCAGGAGCTGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
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| CDS-3UTR CAA 90 bp | GGTAGAGCACTGCCAGTGCCTGTCAGCTGGGGCTTCAAATATCTAGATAATTCTAGGCATAGTAGCCGTTaGTCACCACTTCCCAGTGCA | + |
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Preference number: 5 (lower is better) Translates to: GRALPVPVSWGFKYLDNSRHSSR*SPLPSA Trigger: TGCACTGGGAAGTGGTGACAAACGGCTACTATGCCT...AGAATTATCTAGATATTTGAAGCCCCAGCTGACAGGCACTGGCAGTGCTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000155939.8 |
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| CDS-3UTR CAA 90 bp | GTGATGTCACTTATGAAAACTATCCAAAATAGGCAAACAGACTGGAGGGTTGCCCCAAGTTCCAGCACGTaGATGATCATGCCGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: VMSLMKTIQNRQTDWRVAPSSST*MIMPFS Trigger: GGAGAACGGCATGATCATCAACGTGCTGGAACTTGG...GGCAACCCTCCAGTCTGTTTGCCTATTTTGGATAGTTTTCATAAGTGACATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042452.11 |
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| CDS GCA 72 bp | ACCACTTCCCAGTGCAGGAAGCAGACGAGTGCGTCCTaGGGGCAGCTCATGGATGGAGCGGCCGACGCGAAG | + |
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Preference number: 6 (lower is better) Translates to: TTSQCRKQTSAS*GQLMDGAADAK Trigger: CTTCGCGTCGGCCGCTCCATCCATGAGCTGCCCGCAGGACGCACTCGTCTGCTTCCTGCACTGGGAAGTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| CDS CCA 72 bp | GCAGGAAGCAGACGAGTGCGTCCTGCGGGCAGCTCATaGATGGAGCGGCCGACGCGAAGAGAACCTCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: AGSRRVRPAGSS*MERPTRREPRD Trigger: GTCTCGAGGTTCTCTTCGCGTCGGCCGCTCCATCCATGAGCTGCCCGCAGGACGCACTCGTCTGCTTCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 ENSMUST00000155939.8 |
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| CDS GCA 72 bp | CTGATTTCTTATCACTGGGACCTGGCTGGTCGCCCGTaGCCAAGGCATAGTAGCCGTTTGTCACCACTTCCC | + |
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Preference number: 6 (lower is better) Translates to: LISYHWDLAGRP*PRHSSRLSPLP Trigger: GGGAAGTGGTGACAAACGGCTACTATGCCTTGGGCACGGGCGACCAGCCAGGTCCCAGTGATAAGAAATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
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| CDS CAA 90 bp | TTCAGGGTCAAGTCTGCCACCTGCTGTGTGCCAAGTTCCAGCACGTaGATGATCATGCCGTTCTCCACAGAGACAGCTTTCAGAAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: FRVKSATCCVPSSST*MIMPFSTETAFRRS Trigger: ACTCCTTCTGAAAGCTGTCTCTGTGGAGAACGGCATGATCATCAACGTGCTGGAACTTGGCACACAGCAGGTGGCAGACTTGACCCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042452.11 ENSMUST00000109869.2 |
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