Pregenerated sensors for PSME4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040850Ensembl transcript IDs: ENSMUST00000041231.14, ENSMUST00000129824.2, ENSMUST00000154757.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCTGCAGTGTaGTTGAGCGTGTCAGGTTCTAGGTTAACTCTGAGACTTTGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QHQKLQSVEIQTSAV*LSVSGSRLTLRLCP Trigger: GGGGCAAAGTCTCAGAGTTAACCTAGAACCTGACACGCTCAACCACACTGCAGATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR TCA 90 bp | TCTTCATGGCTCTCTAGACACAAGGCGGTCAAAACTTCAGATTCATaGCCCATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SSWLSRHKAVKTSDS*PMALLMLNSTAFGE Trigger: TTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATGGGTCATGAATCTGAAGTTTTGACCGCCTTGTGTCTAGAGAGCCATGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR TCA 90 bp | TTGAGCGTGTCAGGTTCTAGGTTAACTCTGAGACTTTGCCCCCTTTaGTCCTTTTCTCTTCATGGCTCTCTAGACACAAGGCGGTCAAAA | + |
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Preference number: 1 (lower is better) Translates to: LSVSGSRLTLRLCPL*SFSLHGSLDTRRSK Trigger: TTTTGACCGCCTTGTGTCTAGAGAGCCATGAAGAGAAAAGGATCAAAGGGGGCAAAGTCTCAGAGTTAACCTAGAACCTGACACGCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR TCA 90 bp | ACACTTCAGAACAAGTTAGGAAATCAAATGGCAGCTGAGAACCTGTaGGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGAT | + |
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Preference number: 1 (lower is better) Translates to: TLQNKLGNQMAAENL*AKTNEAKQRSHQND Trigger: ATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGTTCTCAGCTGCCATTTGATTTCCTAACTTGTTCTGAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR CAA 90 bp | CACCAAAAACTCCAGTCTGTGGAGATACAGACATCTGCAGTGTGGTaGAGCGTGTCAGGTTCTAGGTTAACTCTGAGACTTTGCCCCCTT | + |
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Preference number: 2 (lower is better) Translates to: HQKLQSVEIQTSAVW*SVSGSRLTLRLCPL Trigger: AAGGGGGCAAAGTCTCAGAGTTAACCTAGAACCTGACACGCTCAACCACACTGCAGATGTCTGTATCTCCACAGACTGGAGTTTTTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR-3UTR TCA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCAGAGAAGCTGAGTTGTaGAACTTGCAGAGTCACCAC | + |
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Preference number: 2 (lower is better) Translates to: AIGSYSAPKTPVCGDTDIREAEL*NLQSHH Trigger: GTGGTGACTCTGCAAGTTTCACAACTCAGCTTCTCT...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR-3UTR TCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAGACTTTGCCCCCTTTaGTCCTTTTCTCTTCATGGC | + |
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Preference number: 2 (lower is better) Translates to: PVFQQLALTQHQKLQSVERLCPL*SFSLHG Trigger: GCCATGAAGAGAAAAGGATCAAAGGGGGCAAAGTCT...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATAAATCAAATGGCAGCTaGGAACCTGTGAGCGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDKSNGS*EPVSED Trigger: GTCTTCGCTCACAGGTTCTCAGCTGCCATTTGATTT...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR-3UTR CCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAATCCTTTTCTCTTCATaGCTCTCTAGACACAAGGCG | + |
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Preference number: 2 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTILFSS*LSRHKA Trigger: CGCCTTGTGTCTAGAGAGCCATGAAGAGAAAAGGAT...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATAAACTCAACAGCCTTTaGGGAAGAACTCAAAATAAC | + |
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Preference number: 2 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDKLNSL*GRTQNN Trigger: GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTT...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR TCA 72 bp | CTCTCTAGACACAAGGCGGTCAAAACTTCAGATTCATaGCCCATGGCCCTACTAATGCTAAACTCAACAGCC | + |
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Preference number: 3 (lower is better) Translates to: LSRHKAVKTSDS*PMALLMLNSTA Trigger: GGCTGTTGAGTTTAGCATTAGTAGGGCCATGGGTCATGAATCTGAAGTTTTGACCGCCTTGTGTCTAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR TCA 72 bp | AACAAGTTAGGAAATCAAATGGCAGCTGAGAACCTGTaGGCGAAGACTAATGAGGCCAAACAGAGAAGCCAC | + |
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Preference number: 3 (lower is better) Translates to: NKLGNQMAAENL*AKTNEAKQRSH Trigger: GTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGTTCTCAGCTGCCATTTGATTTCCTAACTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR TCA 72 bp | AGTTGTGAAACTTGCAGAGTCACCACGGATGATACCTaGGGATCTGGAGTTTTTGATGAAATGAGCCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SCETCRVTTDDT*GSGVFDEMSPE Trigger: TTCTGGGCTCATTTCATCAAAAACTCCAGATCCTCAGGTATCATCCGTGGTGACTCTGCAAGTTTCACAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACACCGGGCCACAGCTCTTaGAGCTGCACGGCCCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTPGHSS*SCTARP Trigger: GGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGG...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAACACAGCTCTTGGAGCTaGACGGCCCGGCCCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKHSSWS*TARPRL Trigger: CAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTG...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAATACACGATCTCCTTCTaGGGGACGAAGGCCCGCGGG | + |
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Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKYTISF*GTKARG Trigger: CCCGCGGGCCTTCGTCCCGCAGAAGGAGATCGTGTA...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAGGCCCAGGTTGCTCTTaGTCTGTGCCAGCTGCAAGT | + |
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Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRGPGCS*SVPAAS Trigger: ACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCC...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | GGGAGACAGGAGGCTCAGCAGTTCAAGGTCACTTTCTGCTACACAGCAACTCTGAACAAAGGCAGAAGCTaGAGTTGCTCTTTGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: GRQEAQQFKVTFCYTATLNKGRS*SCSLTA Trigger: AGCAGTCAAAGAGCAACTTCAGCTTCTGCCTTTGTT...CAGAGTTGCTGTGTAGCAGAAAGTGACCTTGAACTGCTGAGCCTCCTGTCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
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| CDS-3UTR GCA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAAAGCTCGGCACATGTCTaGCACCATGCGACCTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: ERRLMRPNREATKMMKAQSSAHV*HHATCN Trigger: GTTGCAGGTCGCATGGTGGCAGACATGTGCCGAGCT...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATTTGATCTGTGCCAGCTaGAAGTCGGACTCGGCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDLICAS*KSDSAS Trigger: GGACGCCGAGTCCGACTTGCAGCTGGCACAGATCAA...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGGGACTCTCCACTCTTaGTGGGCAAGGCCACCTTGT | + |
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Preference number: 4 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNGTLHS*WARPPC Trigger: ACAAGGTGGCCTTGCCCAGCAAGAGTGGAGAGTCCC...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| 3UTR CAA 72 bp | CTCCAGTCTGTGGAGATACAGACATCTGCAGTGTGGTaGAGCGTGTCAGGTTCTAGGTTAACTCTGAGACTT | + |
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Preference number: 4 (lower is better) Translates to: LQSVEIQTSAVW*SVSGSRLTLRL Trigger: AAGTCTCAGAGTTAACCTAGAACCTGACACGCTCAACCACACTGCAGATGTCTGTATCTCCACAGACTGGAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAACTTGGGACTAAAACTTaGCTGCTTCCCACTGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKLGTKT*LLPTGR Trigger: CCTCCCAGTGGGAAGCAGTCAAGTTTTAGTCCCAAG...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAACCAAGCACACCAGCATaGCGTTTGACCAACTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKPSTPA*RLTNSA Trigger: TGCAGAGTTGGTCAAACGTCATGCTGGTGTGCTTGG...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTGTTGCTCTTGATCTGTaGCAGCTGCAAGTCGGACTC | + |
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Preference number: 4 (lower is better) Translates to: CERRLMRPNREATKMMKAVALDL*QLQVGL Trigger: GAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAAC...AGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGCTCAGGTCTCATAAGTaGAAGGTTCTGCAGAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PVFQQLALTQHQKLQSVELRSHK*KVLQSL Trigger: CAGGCTCTGCAGAACCTTGCACTTATGAGACCTGAG...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAAGCTTCCGGGGATCTCTaGTTTCACAGGAAGTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: ERRLMRPNREATKMMKAQASGDL*FHRKWL Trigger: TAGCCACTTCCTGTGAAAGCAGAGATCCCCGGAAGC...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAACTCTCCACTCTTGCTaGGCAAGGCCACCTTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTTLHSC*ARPPCS Trigger: GCTACAAGGTGGCCTTGCCCAGCAAGAGTGGAGAGT...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAAGTGAGGACAAGCAGCTaGTCATCAGTGAACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: ERRLMRPNREATKMMKAQVRTSS*SSVNCC Trigger: GCAGCAGTTCACTGATGACCAGCTGCTTGTCCTCAC...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGCTCAAAAAGCCAGTaGAGCTTCCGGGGATCTCTG | + |
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Preference number: 4 (lower is better) Translates to: FFSNWLLLSTKNSSLWRYSSKSQ*SFRGSL Trigger: CAGAGATCCCCGGAAGCTTCACTGGCTTTTTGAGCT...GTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TGGGAGACAGGAGGCTCAGCAGTTCAAGGTCACTTTCTGCTACACAGCAACTCTAAGAGTTTAATGCCCTaGGTTCGTTCATCTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: WETGGSAVQGHFLLHSNSKSLMP*VRSSSS Trigger: TGAAGAAGATGAACGAACTCAGGGCATTAAACTCTT...AGAGTTGCTGTGTAGCAGAAAGTGACCTTGAACTGCTGAGCCTCCTGTCTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
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| CDS-3UTR GCA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCTGGTCCACCCATCATTaGGGTGATCCATATTACAGC | + |
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Preference number: 4 (lower is better) Translates to: AIGSYSAPKTPVCGDTDIWSTHH*GDPYYS Trigger: GCTGTAATATGGATCACCGCAATGATGGGTGGACCA...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCGGGAAACCATTTGCTaGCTGATACCAAACTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: CERRLMRPNREATKMMKARETIC*LIPNFG Trigger: CCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCG...AGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAAGATGATGCAGAAGGTTaGAAGACAGCGTGTAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: ERRLMRPNREATKMMKAQDDAEG*KTACSP Trigger: AGGGCTACACGCTGTCTTGCAACCTTCTGCATCATC...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAACCAATCATGAAGGTTTaGCAGGCACACACCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKPIMKV*QAHTTV Trigger: CACAGTGGTGTGTGCCTGGCAAACCTTCATGATTGG...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATAGGTTCTGCAGAGCCTaGGCTGCTTCTAGACTACCA | + |
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Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDRFCRA*AASRLP Trigger: TGGTAGTCTAGAAGCAGCCCAGGCTCTGCAGAACCT...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATGCTTTCACAGGAAGTaGCTATACAGGTCCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRCFHRK*LYRSPS Trigger: ACTGGGGGACCTGTATAGCCACTTCCTGTGAAAGCA...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | TGGTGGCTCATGCCAGTAATCTCAACATTTAGGAGTGGGAGACAGGAGGCTCAGACAAGGAGATGTTGTTaGAGCAGTATTTGGCAAAGA | + |
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Preference number: 4 (lower is better) Translates to: WWLMPVISTFRSGRQEAQTRRCC*SSIWQR Trigger: TCTTTGCCAAATACTGCTCCAACAACATCTCCTTGT...CTGAGCCTCCTGTCTCCCACTCCTAAATGTTGAGATTACTGGCATGAGCCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
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| CDS-3UTR CCA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCACTCTGCAGAAGGAATaGTATCTCCCACAGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: AIGSYSAPKTPVCGDTDITLQKE*YLPQNQ Trigger: CTGGTTCTGTGGGAGATACCATTCCTTCTGCAGAGT...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGGCCAAGAGGACAGGCTaGATAATGCATTGTACAAAG | + |
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Preference number: 4 (lower is better) Translates to: PVFQQLALTQHQKLQSVEAKRTG*IMHCTK Trigger: CTTTGTACAATGCATTATTCAGCCTGTCCTCTTGGC...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTGTAGCTGTGAGCTGGTaGGGTTCTGTTAATGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: CERRLMRPNREATKMMKAVAVSW*GSVNVS Trigger: AGAGACATTAACAGAACCTCACCAGCTCACAGCTAC...AGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTGCTGAGCTTTGTTTCTaGCCTGACTGTATGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: CERRLMRPNREATKMMKAAELCF*PDCMSL Trigger: CAAGCTCATACAGTCAGGTCAGAAACAAAGCTCAGC...AGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGGTCTGGCTTAGCACCTaGAGTATCAAAGGCACTTGT | + |
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Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQVWLST*SIKGTC Trigger: ACAAGTGCCTTTGATACTTCAGGTGCTAAGCCAGAC...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCTCTTGCCAGTTGTCATaGTGTGTCCTTCGGAAATTG | + |
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Preference number: 4 (lower is better) Translates to: AIGSYSAPKTPVCGDTDISCQLS*CVLRKL Trigger: CAATTTCCGAAGGACACATCATGACAACTGGCAAGA...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTTGCATAATAGCATGGTaGCACAAGGAGGTCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: CERRLMRPNREATKMMKACIIAW*HKEVSE Trigger: CTCACTGACCTCCTTGTGTCACCATGCTATTATGCA...AGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGGACTAAAACTTGACTaGTTCCCACTGGGAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKGLKLD*FPLGGS Trigger: TGAACCTCCCAGTGGGAAGCAGTCAAGTTTTAGTCC...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TTAGGAGTGGGAGACAGGAGGCTCAGCAGTTCAAGGTCACTTTCTGCTACACAGAGATCTTCCTGCACTTaGCATAAGCCATTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LGVGDRRLSSSRSLSATQRSSCT*HKPFQY Trigger: ATATTGAAATGGCTTATGGCAAGTGCAGGAAGATCT...CTGTGTAGCAGAAAGTGACCTTGAACTGCTGAGCCTCCTGTCTCCCACTCCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
||
| CDS-3UTR GCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAGCTAGAAAGAACACATaGACCAAGTCCAAGCACACC | + |
|
Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRARKNT*TKSKHT Trigger: GGTGTGCTTGGACTTGGTGCATGTGTTCTTTCTAGC...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAATGGTCATCAGTGAACTaGTGCTTGTGTTCTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKWSSVN*CLCSCQ Trigger: CTGGCAAGAACACAAGCAGCAGTTCACTGATGACCA...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAGGTGTAAGGTTCGCTaGAGAATCTTTACAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVFQQLALTQHQKLQSVERCKVR*RIFTSC Trigger: GCAGCTTGTAAAGATTCTCCAGCGAACCTTACACCT...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATAGGTTCATAAGGAGCTaGGGCATCCAGGTAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDRFIRS*GIQVGT Trigger: TGTTCCTACCTGGATGCCCCAGCTCCTTATGAACCT...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGAGCTTACCCCAGTCCTTaGCAGGGAAGTATTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRAYPSP*QGSIQK Trigger: CTTCTGAATACTTCCCTGTCAAGGACTGGGGTAAGC...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAAATACCAGCAACAGCTaGGATAGCCATCTTTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRNTSNS*DSHLSN Trigger: GTTCGAAAGATGGCTATCTCAGCTGTTGCTGGTATT...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGACTCTGGGTACTTTCATaGGAATCTGCAACCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRLWVLS*ESATKR Trigger: ACGTTTGGTTGCAGATTCTCATGAAAGTACCCAGAG...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACTTCACCACTCAATGGTaGCTCCAAGAGCAGCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNFTTQW*LQEQLK Trigger: TTTGAGCTGCTCTTGGAGTCACCATTGAGTGGTGAA...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAAAACAAAGGCAGAAGCTaGAGTTGCTCTTTGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ERRLMRPNREATKMMKAQNKGRS*SCSLTA Trigger: AGCAGTCAAAGAGCAACTTCAGCTTCTGCCTTTGTT...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGACACCAGCATGACGTTTaGCCAACTCTGCAGAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRHQHDV*PTLQKE Trigger: TTCCTTCTGCAGAGTTGGTCAAACGTCATGCTGGTG...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGAATAAGTGCAAGGTTCTaGAGAGCCTGGGCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRISARF*RAWAAS Trigger: AGAAGCAGCCCAGGCTCTGCAGAACCTTGCACTTAT...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGACTTCGGGAAACCATTTaGTGCCTGATACCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRLRETI*CLIPNF Trigger: GAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAG...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCAGCCCGATTCCTATATaGTCAAATTTCCAAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIGSYSAPKTPVCGDTDISPIPI*SNFQGR Trigger: TCTGCCTTGGAAATTTGAGCATATAGGAATCGGGCT...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAATTGCATGCCAAGAACTaGTTCTTGCTGTCTGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ERRLMRPNREATKMMKAQLHAKN*FLLSGL Trigger: TAAGCCAGACAGCAAGAAGCAGTTCTTGGCATGCAA...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATTTATGATGCAGTTCTaGAGGAAGGGAGGTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRFMMQF*RKGGRK Trigger: CTTCCTACCTCCCTTCCTCCAGAACTGCATCATAAA...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGCCTAACAACACTGTTTaGCAACCGCTGAAGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQPNNTV*QPLKEF Trigger: AAACTCCTTCAGCGGTTGCCAAACAGTGTTGTTAGG...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGCTTACTAAAGTCGTTTaGATCTACCCCAGGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQLTKVV*IYPRQC Trigger: GCATTGCCTGGGGTAGATCCAAACGACTTTAGTAAG...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATGAAGGAACATGCCACTaGATCCCCAGATTCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDEGTCH*IPRFHK Trigger: TTTGTGGAATCTGGGGATCCAGTGGCATGTTCCTTC...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAGTTTAAAACCTTTATaGTGCAGTTCTGGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PVFQQLALTQHQKLQSVESLKPL*CSSGGR Trigger: CCTTCCTCCAGAACTGCATCATAAAGGTTTTAAACT...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACCTGTTTGGCAACCGCTaGAGGAGTTTCATTAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNLFGNR*RSFINL Trigger: CAAGTTAATGAAACTCCTTCAGCGGTTGCCAAACAG...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | TTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACACCAGGAGGGCTTCTTaGATCTTTCACGATGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: FFSNWLLLSTKNSSLWRYTRRAS*IFHDVI Trigger: GATTACATCGTGAAAGATTCAAGAAGCCCTCCTGGT...GTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATGTAGAACGAAGAAGATaGTGCAGAAGGTTGCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDVERRR*CRRLQD Trigger: GTCTTGCAACCTTCTGCATCATCTTCTTCGTTCTAC...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAAAAAGAGACTTCTTCTaGAGAAGGAACATGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKKRDFF*RRNMPL Trigger: CAGTGGCATGTTCCTTCTTCAGAAGAAGTCTCTTTT...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGAATACAGTCCCAATCATaGAGGTTTGCCAGGCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRIQSQS*RFARHT Trigger: TGTGTGCCTGGCAAACCTTCATGATTGGGACTGTAT...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCATAGTCAGCTTTTTGTaGGTTCTCTTTAGCTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AIGSYSAPKTPVCGDTDIIVSFL*VLFSCL Trigger: CAAGCAGCTAAAGAGAACTCACAAAAAGCTGACTAT...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CAGGAGGCTCAGCAGTTCAAGGTCACTTTCTGCTACACAGCAACTCTGAAACAATCCATAACATGGTTCTaGATTTCTTCATCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: QEAQQFKVTFCYTATLKQSITWF*ISSSTS Trigger: AGATGTGGATGAAGAAATTCAGAACCATGTTATGGA...TTGTTTCAGAGTTGCTGTGTAGCAGAAAGTGACCTTGAACTGCTGAGCCTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
||
| CDS-3UTR GCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGACACTGTGGGAGATTTTaGACTGAAACCCAAAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRHCGRF*TETQRP Trigger: TGGCCTTTGGGTTTCAGTGCAAAATCTCCCACAGTG...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAATGCCACCATGCGACCTaGAACTCTTGTTTCAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKCHHAT*NSCFKY Trigger: ATATTTGAAACAAGAGTTGCAGGTCGCATGGTGGCA...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGACCAGCTATAATTTCTaGAACACATCTCTGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: PVFQQLALTQHQKLQSVETSYNF*NTSLGT Trigger: AGTACCCAGAGATGTGTTGCAGAAATTATAGCTGGT...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | TTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACTCATCAGTGAACTGCTaGTTGTGTTCTTGCCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FFSNWLLLSTKNSSLWRYSSVNC*LCSCQL Trigger: CAACTGGCAAGAACACAAGCAGCAGTTCACTGATGA...GTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACTTGACTGCTTCCCACTaGGAGGTTCAGGCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSKEKVISTQGTLQNLTASH*EVQASQ Trigger: CTGAGAAGCCTGAACCTCCCAGTGGGAAGCAGTCAA...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATCTCGGTAGTTTTCTCTaGATAGGTCATGTTCCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDLGSFL*IGHVPV Trigger: GACTGGAACATGACCTATCCAGAGAAAACTACCGAG...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATTCCAGTGACATTGCTTaGCTAAGCCCTGAAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDSSDIA*LSPEET Trigger: TGTTTCTTCAGGGCTTAGCCAAGCAATGTCACTGGA...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAACAACCATATTCTTTaGCCAGTTGTAGTATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVFQQLALTQHQKLQSVENNHIL*PVVVSP Trigger: TGGGGATACTACAACTGGCCAAAGAATATGGTTGTT...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGACAAGGAGATGTTGTTaGAGCAGTATTTGGCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVFQQLALTQHQKLQSVETRRCC*SSIWQR Trigger: TCTTTGCCAAATACTGCTCCAACAACATCTCCTTGT...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAGGTTATAAAATACCATaGTCTGGAGGTAGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRGYKIP*SGGRSA Trigger: TGCTGACCTACCTCCAGACCATGGTATTTTATAACC...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAATCTCAGACAGAAGCTaGAGGTTCCACAGCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: DFVICLKRKSDQYSGNTSISDRS*RFHSNS Trigger: GGAGTTGCTGTGGAACCTTCAGCTTCTGTCTGAGAT...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAATTGATAAGCTCAGGCTaGAGAAAGGAGTCTAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: ERRLMRPNREATKMMKAQLISSG*RKESNK Trigger: TTTGTTAGACTCCTTTCTTCAGCCTGAGCTTATCAA...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAAGGCACACACCACTGTaGTTTCCAAGTAGACAATAT | + |
|
Preference number: 4 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTRHTPL*FPSRQY Trigger: ATATTGTCTACTTGGAAATCACAGTGGTGTGTGCCT...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACCAAAGTTGCTCAAAATaGATCTGCATAGCACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNQSCSK*ICIALS Trigger: GGACAGTGCTATGCAGATTCATTTTGAGCAACTTTG...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGTCATCTCAATAGGCTaGGGATCATTCAAATGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTVISIG*GSFKCA Trigger: TGCACATTTGAATGATCCTCAGCCTATTGAGATGAC...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATTACCAAGTTAGTAACTaGCTCTCCTTTCAATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDYQVSN*LSFQWR Trigger: CCTCCATTGAAAGGAGAGGCAGTTACTAACTTGGTA...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAAGTGCTGGCCAGGTCTaGACAATACAGTCCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: DFVICLKRKSDQYSGNTSSAGQV*TIQSQS Trigger: TGATTGGGACTGTATTGTGCAGACCTGGCCAGCACT...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACACAGCACTGTATATCTTaGATGCCAAGAACTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTQHCIS*MPRTAS Trigger: AGAAGCAGTTCTTGGCATGCAAGATATACAGTGCTG...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGAGGATCATTCAAATGTaGACTGAGGTTCATAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQRIIQM*TEVHKE Trigger: CTCCTTATGAACCTCAGTGCACATTTGAATGATCCT...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGAAAAGTCGGATATAAGTaGAGAGTTTCCGCGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRKVGYK*RVSASR Trigger: TCTGGACGCGGAAACTCTCCACTTATATCCGACTTT...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATGGGCTAAGTAGTGTCTaGCTAATGGAAGGATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDGLSSV*LMEGFF Trigger: AAAGAATCCTTCCATTAGCCAGACACTACTTAGCCC...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGTGTCCTTCGGAAATTaGATAAGGTCTTCTTTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TCERRLMRPNREATKMMKVSFGN*IRSSLQ Trigger: CTGTAAAGAAGACCTTATCCAATTTCCGAAGGACAC...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAATCCCTGCATCATGCTaGTTTCTAGTTTTGGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTIPASC*FLVLEL Trigger: CAATTCCAAAACTAGAAATCAGCATGATGCAGGGAT...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACAAACCATTTGCTGCCTaGTACCAAACTTCGGGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSKEKVISTQGTLQNKPFAA*YQTSGY Trigger: GTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTT...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACAAGTTAAAGACCTTCTaGAGGGCCACCATAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNKLKTF*RATINM Trigger: CATATTTATGGTGGCCCTTCAGAAGGTCTTTAACTT...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGTGCTATTGCAGCACATaGCTTTGGAATTGTAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQCYCST*LWNCKI Trigger: GATTTTACAATTCCAAAGTCATGTGCTGCAATAGCA...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGTCCATAACATGGTTCTaGATTTCTTCATCCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQSITWF*ISSSTS Trigger: AGATGTGGATGAAGAAATTCAGAACCATGTTATGGA...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR TCA 90 bp | TTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAAGAGTTTAATGCCCTaGGTTCGTTCATCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FFSNWLLLSTKNSSLWRYKSLMP*VRSSSS Trigger: TGAAGAAGATGAACGAACTCAGGGCATTAAACTCTT...GTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAACATGTCTGCCACCATaGGACCTGCAACTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DFVICLKRKSDQYSGNTSTCLPP*DLQLLF Trigger: AAACAAGAGTTGCAGGTCGCATGGTGGCAGACATGT...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGAGAATCTTTACAAGCTaGTCCCTATACAGAAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQRIFTS*SLYRSN Trigger: GTTACTTCTGTATAGGGAGCAGCTTGTAAAGATTCT...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAAGATCTTCCTGCACTTaGCATAAGCCATTTCAATAT | + |
|
Preference number: 4 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRRSSCT*HKPFQY Trigger: ATATTGAAATGGCTTATGGCAAGTGCAGGAAGATCT...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | GTAGTGCTAATGCTTGGTCTGCAAAACATTTGTGTGGTGGCTCATGCCAGTAATAGAAAAAGATCTTCCTaGACTTGCCATAAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VVLMLGLQNICVVAHASNRKRSS*TCHKPF Trigger: AAATGGCTTATGGCAAGTGCAGGAAGATCTTTTTCT...ATTACTGGCATGAGCCACCACACAAATGTTTTGCAGACCAAGCATTAGCACTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
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| CDS-3UTR CCA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACATCTGCTGGAAAGTATaGTCGGCAGCTTTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSKEKVISTQGTLQNICWKV*SAAFHQ Trigger: CTGGTGAAAAGCTGCCGACCATACTTTCCAGCAGAT...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGTATCTTCGGTACATATaGATCCCAATCTATGTATCC | + |
|
Preference number: 4 (lower is better) Translates to: FQQLALTQHQKLQSVEIQYLRYI*IPIYVS Trigger: GGATACATAGATTGGGATCCATATGTACCGAAGATA...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGATCATCAGTAAGCTTATaGCTTTCAGGCACAGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRSSVSL*LSGTGV Trigger: AACTCCTGTGCCTGAAAGCCATAAGCTTACTGATGA...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR TCA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACCAAACTCTCCAAATaGGTCATTTTCTCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDTKLSK*VIFSVS Trigger: AGAAACAGAGAAAATGACTCATTTGGAGAGTTTGGT...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACAGACGGGCAAATCCCTaGATCATGCTGATTTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSKEKVISTQGTLQNRRANP*IMLISS Trigger: ACTAGAAATCAGCATGATGCAGGGATTTGCCCGTCT...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACAAGAGATTTACTAATTaGCCCTCCCACTGTGGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSKEKVISTQGTLQNKRFTN*PSHCGR Trigger: TCTCCCACAGTGGGAGGGGCAATTAGTAAATCTCTT...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAACCAAACGTTCTAAATaGGGCTTCAGAACAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DFVICLKRKSDQYSGNTSTKRSK*GFRTGR Trigger: TCTGCCTGTTCTGAAGCCCCATTTAGAACGTTTGGT...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | GTAGTGCTAATGCTTGGTCTGCAAAACATTTGTGTGGTGGCTCATGCCAGTAATTGTTGGAGCAGTATTTaGCAAAGAAACATCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: VVLMLGLQNICVVAHASNCWSSI*QRNIYH Trigger: ATGATAGATGTTTCTTTGCCAAATACTGCTCCAACA...ATTACTGGCATGAGCCACCACACAAATGTTTTGCAGACCAAGCATTAGCACTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
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| CDS-3UTR GCA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCATACTTCAGAAGTCTGTaGAATAGTTCAGGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DFVICLKRKSDQYSGNTSYFRSL*NSSGTL Trigger: GAGAGTCCCTGAACTATTGCACAGACTTCTGAAGTA...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CCA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACATGTTGGAGCAGTATTTaGCAAAGAAACATCTATCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTCWSSI*QRNIYH Trigger: ATGATAGATGTTTCTTTGCCAAATACTGCTCCAACA...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGACTTTCGAACAACAATTaGATCATGGTTGAGATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRLSNNN*IMVEIF Trigger: GAAAATCTCAACCATGATGCAATTGTTGTTCGAAAG...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACAGGTCATTTCTTTCTTaGAGTACAGATGAACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSKEKVISTQGTLQNRSFLS*STDEQS Trigger: AGACTGTTCATCTGTACTGCAAGAAAGAAATGACCT...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACCTCAAATTCAGCTGTTaGCGAACAAAGTTCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSYVSKEKVISTQGTLQNLKFSC*RTKFFF Trigger: GAAAAAGAACTTTGTTCGGCAACAGCTGAATTTGAG...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAAGAAAAAGATCTTCCTaGACTTGCCATAAGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: DFVICLKRKSDQYSGNTSRKRSS*TCHKPF Trigger: AAATGGCTTATGGCAAGTGCAGGAAGATCTTTTTCT...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR GCA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAATATATAATCTGTTCTaGCTCTATCATATCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DFVICLKRKSDQYSGNTSIYNLF*LYHILP Trigger: AGGGAGGATATGATAGAGGCAGAACAGATTATATAT...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 90 bp | CGGGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCTCTTaGTCTGTGCCAGCTGCAAGTCGGACTCGGCGTCCAGCCGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RATALGAARPGPGCS*SVPAASRTRRPAAR Trigger: CCGAGCGGCTGGACGCCGAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 90 bp | CAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCTCTTGATCTGTaGCAGCTGCAAGTCGGACTCGGCGTCCAGCCGCTCGGCATAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QLLELHGPAQVALDL*QLQVGLGVQPLGIG Trigger: CCCTATGCCGAGCGGCTGGACGCCGAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CCA 90 bp | GTGGAGAGTTTCCGCGTCCAGAAGAGGCCCCCGGGCCACAGCTCTTaGAGCTGCACGGCCCGGCCCAGGTTGCTCTTGATCTGTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VESFRVQKRPPGHSS*SCTARPRLLLICAS Trigger: GCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACGCGGAAACTCTCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 90 bp | AGTTTCCGCGTCCAGAAGAGGCCCCCGGGCCACAGCTCTTGGAGCTaGACGGCCCGGCCCAGGTTGCTCTTGATCTGTGCCAGCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFRVQKRPPGHSSWS*TARPRLLLICASCK Trigger: CTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACGCGGAAACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CCA 90 bp | GGAGAACCAATGGGAGCCGCTCGTCCCTATGCCCGGGTACGCCTGTaGCTCCCCAGAGCCTGGCACGTCAAGAGAAAGGACCAGAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: GEPMGAARPYARVRL*LPRAWHVKRKDQNA Trigger: AGCGTTCTGGTCCTTTCTCTTGACGTGCCAGGCTCTGGGGAGCCACAGGCGTACCCGGGCATAGGGACGAGCGGCTCCCATTGGTTCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154757.2 |
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| CDS GCA 90 bp | ACAGGTCCCCCAGTCATTGTATGTCTCCACTGTCATGTTGGACAGTaGCGTTCTCAGCAGCGGGCACAGGAGCTCCCAAAGCTTCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TGPPVIVCLHCHVGQ*RSQQRAQELPKLLH Trigger: GTGGAGAAGCTTTGGGAGCTCCTGTGCCCGCTGCTGAGAACGGCACTGTCCAACATGACAGTGGAGACATACAATGACTGGGGGACCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CCA 90 bp | TGGCTATACAGGTCCCCCAGTCATTGTATGTCTCCACTGTCATGTTaGACAGTGCCGTTCTCAGCAGCGGGCACAGGAGCTCCCAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WLYRSPSHCMSPLSC*TVPFSAAGTGAPKA Trigger: AGCTTTGGGAGCTCCTGTGCCCGCTGCTGAGAACGGCACTGTCCAACATGACAGTGGAGACATACAATGACTGGGGGACCTGTATAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS-3UTR CAA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAACGGCCCGGCCCAGGTaGCTCTTGATCTGTGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTTARPR*LLICAS Trigger: GCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGT...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 90 bp | CCTTCACCACTCAATGGTGACTCCAAGAGCAGCTCAAAAAGCCAGTaGAGCTTCCGGGGATCTCTGCTTTCACAGGAAGTGGCTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLNGDSKSSSKSQ*SFRGSLLSQEVAIQ Trigger: CTGTATAGCCACTTCCTGTGAAAGCAGAGATCCCCGGAAGCTTCACTGGCTTTTTGAGCTGCTCTTGGAGTCACCATTGAGTGGTGAAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 90 bp | CTGGGGCATCCAGGTAGGAACATCATAAGGGCTAGAAAGAACACATaGACCAAGTCCAAGCACACCAGCATGACGTTTGACCAACTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LGHPGRNIIRARKNT*TKSKHTSMTFDQLC Trigger: GCAGAGTTGGTCAAACGTCATGCTGGTGTGCTTGGACTTGGTGCATGTGTTCTTTCTAGCCCTTATGATGTTCCTACCTGGATGCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACAGGGACTCTCCACTCTaGCTGGGCAAGGCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNRDSPL*LGKATL Trigger: CAAGGTGGCCTTGCCCAGCAAGAGTGGAGAGTCCCT...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TGGTGGCTCATGCCAGTAATCTCAACATTTAGGAGTGGGAGACAGGAGGCTCAGGGATACAAGGAGATGTaGTTGGAGCAGTATTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: WWLMPVISTFRSGRQEAQGYKEM*LEQYLA Trigger: TGCCAAATACTGCTCCAACAACATCTCCTTGTATCC...CTGAGCCTCCTGTCTCCCACTCCTAAATGTTGAGATTACTGGCATGAGCCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
||
| CDS-3UTR CAA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAACCCAATCATGAAGGTTaGCCAGGCACACACCACTGT | + |
|
Preference number: 5 (lower is better) Translates to: TCERRLMRPNREATKMMKPNHEG*PGTHHC Trigger: ACAGTGGTGTGTGCCTGGCAAACCTTCATGATTGGG...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGAGCCAAGAACTGCTTCTaGCTGTCTGGCTTAGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRAKNCF*LSGLAP Trigger: AGGTGCTAAGCCAGACAGCAAGAAGCAGTTCTTGGC...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 90 bp | AGCACAGGGGGTATTACTAACTCAGGTCTCATAAGTGCAAGGTTCTaGAGAGCCTGGGCTGCTTCTAGACTACCAGTTTTGCTAAACATA | + |
|
Preference number: 5 (lower is better) Translates to: STGGITNSGLISARF*RAWAASRLPVLLNI Trigger: TATGTTTAGCAAAACTGGTAGTCTAGAAGCAGCCCAGGCTCTGCAGAACCTTGCACTTATGAGACCTGAGTTAGTAATACCCCCTGTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 90 bp | GGTCTTCTTTACAGTCATCTCAATAGGCTGAGGATCATTCAAATGTaGACTGAGGTTCATAAGGAGCTGGGGCATCCAGGTAGGAACATC | + |
|
Preference number: 5 (lower is better) Translates to: GLLYSHLNRLRIIQM*TEVHKELGHPGRNI Trigger: GATGTTCCTACCTGGATGCCCCAGCTCCTTATGAACCTCAGTGCACATTTGAATGATCCTCAGCCTATTGAGATGACTGTAAAGAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGTCAGTGAACTGCTGCTaGTGTTCTTGCCAGTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVFQQLALTQHQKLQSVESVNCC*CSCQLS Trigger: TGACAACTGGCAAGAACACAAGCAGCAGTTCACTGA...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 90 bp | TCAACAGAGGTAGCATGTGTGTTGGCCCTTCGGGAAACCATTTGCTaGCTGATACCAAACTTCGGGCTACTCCAATTACACAATTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: STEVACVLALRETIC*LIPNFGLLQLHNLK Trigger: CTTTAAATTGTGTAATTGGAGTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGGGCCAACACACATGCTACCTCTGTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 90 bp | TCATCAACAGAGGTAGCATGTGTGTTGGCCCTTCGGGAAACCATTTaGTGCCTGATACCAAACTTCGGGCTACTCCAATTACACAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSTEVACVLALRETI*CLIPNFGLLQLHNL Trigger: TAAATTGTGTAATTGGAGTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGGGCCAACACACATGCTACCTCTGTTGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 90 bp | TGCTTACAGGTCAGGTGTAAGGTTCGCTGGAGAATCTTTACAAGCTaGTCCCTATACAGAAGTAACTTCTTCCCGTCTACACGAGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: CLQVRCKVRWRIFTS*SLYRSNFFPSTRVI Trigger: GATTACTCGTGTAGACGGGAAGAAGTTACTTCTGTATAGGGAGCAGCTTGTAAAGATTCTCCAGCGAACCTTACACCTGACCTGTAAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGACCTTCGGGAAACCATTaGCTGCCTGATACCAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: QFFSNWLLLSTKNSSLWRPSGNH*LPDTKL Trigger: AAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGG...TCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGGCTTACCCCAGTCCTaGACAGGGAAGTATTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTGLPQS*TGKYSE Trigger: TTCTGAATACTTCCCTGTCAAGGACTGGGGTAAGCC...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACACAATATAAGGCGCCCTaGAACTGCTGCTGTGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTQYKAP*NCCCVT Trigger: TGTCACACAGCAGCAGTTCAAGGGCGCCTTATATTG...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS TCA 90 bp | AGCTGGTCATCAGTGAACTGCTGCTTGTGTTCTTGCCAGTTGTCATaGTGTGTCCTTCGGAAATTGGATAAGGTCTTCTTTACAGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: SWSSVNCCLCSCQLS*CVLRKLDKVFFTVI Trigger: GATGACTGTAAAGAAGACCTTATCCAATTTCCGAAGGACACATCATGACAACTGGCAAGAACACAAGCAGCAGTTCACTGATGACCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCAACCAGGAGGGCTTCTaGAATCTTTCACGATGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: AIGSYSAPKTPVCGDTDINQEGF*NLSRCN Trigger: ATTACATCGTGAAAGATTCAAGAAGCCCTCCTGGTT...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCTGTCTCTTCCCTTGTTaGCTCCAATGTACTACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: AIGSYSAPKTPVCGDTDICLFPC*LQCTTF Trigger: GAAAGTAGTACATTGGAGCAAACAAGGGAAGAGACA...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACAAGTATCAAAGGCACTaGTTGAGGGTACAGCAACCC | + |
|
Preference number: 5 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNKYQRH*LRVQQP Trigger: GGGTTGCTGTACCCTCAACAAGTGCCTTTGATACTT...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CATGGCCCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACCTGCTGCTTGTGTTCTaGCCAGTTGTCATGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: HGPTNAKLNSLWGRTQNNLLLVF*PVVMMC Trigger: ACACATCATGACAACTGGCAAGAACACAAGCAGCAG...GTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGGGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS TCA 90 bp | AGAAGTAACTTCTTCCCGTCTACACGAGTAATCTCAGACAGAAGCTaGAGGTTCCACAGCAACTCCTTGTCTAGCTCTTCTTCATTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: RSNFFPSTRVISDRS*RFHSNSLSSSSSFN Trigger: ATTGAATGAAGAAGAGCTAGACAAGGAGTTGCTGTGGAACCTTCAGCTTCTGTCTGAGATTACTCGTGTAGACGGGAAGAAGTTACTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCCTAACATTTCTGCTGTaGAATCTGCTGGAAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: AIGSYSAPKTPVCGDTDILTFLL*NLLESM Trigger: CATACTTTCCAGCAGATTCAACAGCAGAAATGTTAG...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | ACCTGTGAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAAGGAGTTTCATTAACTaGTTCAGCCAACGCCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: TCERRLMRPNREATKMMKRSFIN*FSQRPL Trigger: TAATGGGCGTTGGCTGAACAAGTTAATGAAACTCCT...TTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTCACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACATTCCACAGCAACTCCTaGTCTAGCTCTTCTTCATTC | + |
|
Preference number: 5 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTFHSNS*SSSSSF Trigger: GAATGAAGAAGAGCTAGACAAGGAGTTGCTGTGGAA...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGCAAATAGTCTCACTATaGATGGCTTTTCCAGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PVFQQLALTQHQKLQSVEQIVSL*MAFPVT Trigger: TGTCACTGGAAAAGCCATCAATAGTGAGACTATTTG...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGTCACCAGCAAGAATTTaGGTAGGTTTAGGACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: FQQLALTQHQKLQSVEIQSPARI*VGLGHP Trigger: TGGATGTCCTAAACCTACCAAAATTCTTGCTGGTGA...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GAGCGAAGACTAATGAGGCCAAACAGAGAAGCCACCAAAATGATGAAAGCTCAAAAACAACCATATTCTTaGGCCAGTTGTAGTATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: ERRLMRPNREATKMMKAQKQPYS*ASCSIP Trigger: GGGGATACTACAACTGGCCAAAGAATATGGTTGTTT...TTGAGCTTTCATCATTTTGGTGGCTTCTCTGTTTGGCCTCATTAGTCTTCGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGACATCGTGACAAACAGAGCTTaGCATCTCTTTTCAGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AIGSYSAPKTPVCGDTDIVTNRA*HLFSVH Trigger: ATGAACTGAAAAGAGATGCAAAGCTCTGTTTGTCAC...GATGTCTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS TCA 90 bp | CTTCGGGCTACTCCAATTACACAATTTAAAGTAGCTGTGAGCTGGTaGGGTTCTGTTAATGTCTCTAAAGCAGGGTATGTTCTTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LRATPITQFKVAVSW*GSVNVSKAGYVLSS Trigger: GCTTGAAAGAACATACCCTGCTTTAGAGACATTAACAGAACCTCACCAGCTCACAGCTACTTTAAATTGTGTAATTGGAGTAGCCCGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | AGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATTCTAGACTACCAGTTTaGCTAAACATAGCCAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SFSAIGSYSAPKTPVCGDSRLPV*LNIAKR Trigger: CCTCTTGGCTATGTTTAGCAAAACTGGTAGTCTAGA...ATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CCAGTTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGTGCGACCTGCAACTCTaGTTTCAAATATATGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PVFQQLALTQHQKLQSVECDLQL*FQIYVK Trigger: TTTCACATATATTTGAAACAAGAGTTGCAGGTCGCA...CTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAACTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGTCCGGTATACAATTTaGTTTCCTCTAAGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTVRYTI*FPLRRP Trigger: TGGTCTCCTTAGAGGAAACAAAATTGTATACCGGAC...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACAGTGTGTCCTTCGGAAATaGGATAAGGTCTTCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: FQQLALTQHQKLQSVEIQCVLRK*DKVFFT Trigger: TGTAAAGAAGACCTTATCCAATTTCCGAAGGACACA...CTGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS TCA 90 bp | ATTAAACCAGCTATAATTTCTGCAACACATCTCTGGGTACTTTCATaGGAATCTGCAACCAAACGTTCTAAATGGGGCTTCAGAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IKPAIISATHLWVLS*ESATKRSKWGFRTG Trigger: GCCTGTTCTGAAGCCCCATTTAGAACGTTTGGTTGCAGATTCTCATGAAAGTACCCAGAGATGTGTTGCAGAAATTATAGCTGGTTTAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 90 bp | CGAGCAAAGAGATTTACTAATTGCCCCTCCCACTGTGGGAGATTTTaGACTGAAACCCAAAGGCCAATTAATTCATCAAACCAAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RAKRFTNCPSHCGRF*TETQRPINSSNQSL Trigger: TAAACTTTGGTTTGATGAATTAATTGGCCTTTGGGTTTCAGTGCAAAATCTCCCACAGTGGGAGGGGCAATTAGTAAATCTCTTTGCTCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 90 bp | AGCGATCTTAAAGAACAAAGGCAGAAGCTGAAGTTGCTCTTTGACTaGTGTAGAAAAAGATCTTCCTGCACTTGCCATAAGCCATTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: SDLKEQRQKLKLLFD*CRKRSSCTCHKPFQ Trigger: TTGAAATGGCTTATGGCAAGTGCAGGAAGATCTTTTTCTACAGCAGTCAAAGAGCAACTTCAGCTTCTGCCTTTGTTCTTTAAGATCGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACCCTCAAATTCAGCTGTaGCCGAACAAAGTTCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: FFSNWLLLSTKNSSLWRYPQIQL*PNKVLF Trigger: AAAAAGAACTTTGTTCGGCAACAGCTGAATTTGAGG...GTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGATTTCTGTCTCTTCCCTaGTTTGCTCCAATGTACTAC | + |
|
Preference number: 5 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRFLSLP*FAPMYY Trigger: GTAGTACATTGGAGCAAACAAGGGAAGAGACAGAAA...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACGACTGTATGAGCTTGTaGATAATCGAAGAAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFSNWLLLSTKNSSLWRYDCMSL*IIEEDL Trigger: GAGATCTTCTTCGATTATCAACAAGCTCATACAGTC...GTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS TCA 90 bp | AATCTTTCACGATGTAATCTCCTAACAACACTGTTTGGCAACCGCTaGAGGAGTTTCATTAACTTGTTCAGCCAACGCCCATTATTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: NLSRCNLLTTLFGNR*RSFINLFSQRPLFE Trigger: TTCAAATAATGGGCGTTGGCTGAACAAGTTAATGAAACTCCTTCAGCGGTTGCCAAACAGTGTTGTTAGGAGATTACATCGTGAAAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS CCA 90 bp | AGCAGTAAACTCAGGGATACAAGGAGATGTTGTTGGAGCAGTATTTaGCAAAGAAACATCTATCATAAATATGTAGGTCAGCACACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSKLRDTRRCCWSSI*QRNIYHKYVGQHTS Trigger: GGAAGTGTGCTGACCTACATATTTATGATAGATGTTTCTTTGCCAAATACTGCTCCAACAACATCTCCTTGTATCCCTGAGTTTACTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000129824.2 |
||
| CDS-3UTR CAA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGACCTGACTGTATGAGCTaGTTGATAATCGAAGAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRPDCMS*LIIEED Trigger: ATCTTCTTCGATTATCAACAAGCTCATACAGTCAGG...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGTTCTCTTTAGCTGCTaGAGAATACCAGCAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DFVICLKRKSDQYSGNTSVLFSC*RIPATA Trigger: AGCTGTTGCTGGTATTCTCAAGCAGCTAAAGAGAAC...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | TTTTCAGCAATTGGCTCTTACTCAGCACCAAAAACTCCAGTCTGTGGAGATACATTGTTGGAGCAGTATTaGGCAAAGAAACATCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: FSAIGSYSAPKTPVCGDTLLEQY*AKKHLS Trigger: TGATAGATGTTTCTTTGCCAAATACTGCTCCAACAA...TGTATCTCCACAGACTGGAGTTTTTGGTGCTGAGTAAGAGCCAATTGCTGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CTCTCTAAAGTAGTGCTAATGCTTGGTCTGCAAAACATTTGTGTGGTGGCTCATTTGTTGGAGCAGTATTaGGCAAAGAAACATCTATCA | + |
|
Preference number: 5 (lower is better) Translates to: LSKVVLMLGLQNICVVAHLLEQY*AKKHLS Trigger: TGATAGATGTTTCTTTGCCAAATACTGCTCCAACAA...ATGAGCCACCACACAAATGTTTTGCAGACCAAGCATTAGCACTACTTTAGAGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129824.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGAACGGATACAAGGAGATGTaGTTGGAGCAGTATTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSYVSKEKVISTQGTLQNGYKEM*LEQYLA Trigger: TGCCAAATACTGCTCCAACAACATCTCCTTGTATCC...GTTCTGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCATCAGCACTGTATATCTaGCATGCCAAGAACTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DFVICLKRKSDQYSGNTSSALYI*HAKNCF Trigger: GAAGCAGTTCTTGGCATGCAAGATATACAGTGCTGA...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | CCTACTAATGCTAAACTCAACAGCCTTTGGGGAAGAACTCAAAATAACGTGAGACTCAGGTGCTCTGTCTaGGAATATAATATTCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PTNAKLNSLWGRTQNNVRLRCSV*EYNILS Trigger: AGAAAGAATATTATATTCCAAGACAGAGCACCTGAG...TCTCACGTTATTTTGAGTTCTTCCCCAAAGGCTGTTGAGTTTAGCATTAGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS-3UTR CAA 90 bp | GACTTTGTCATATGTCTCAAAAGAAAAAGTGATCAGTACTCAGGGAACACTTCAGCCAACGCCCATTATTaGAAGGATGATAAAATGATG | + |
|
Preference number: 5 (lower is better) Translates to: DFVICLKRKSDQYSGNTSANAHY*KDDKMM Trigger: CATCATTTTATCATCCTTCAAATAATGGGCGTTGGC...TGAAGTGTTCCCTGAGTACTGATCACTTTTTCTTTTGAGACATATGACAAAGTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS TCA 90 bp | CTTGCCATAAGCCATTTCAATATAGTTTTTAAGAGTTTAATGCCCTaGGTTCGTTCATCTTCTTCACCAATGCCATTTTCTTCCATAACA | + |
|
Preference number: 5 (lower is better) Translates to: LAISHFNIVFKSLMP*VRSSSSPMPFSSIT Trigger: TGTTATGGAAGAAAATGGCATTGGTGAAGAAGATGAACGAACTCAGGGCATTAAACTCTTAAAAACTATATTGAAATGGCTTATGGCAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000129824.2 |
||
| CDS CAA 90 bp | CCGGGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCTCTaGATCTGTGCCAGCTGCAAGTCGGACTCGGCGTCCAGCCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PGHSSWSCTARPRLL*ICASCKSDSASSRS Trigger: CGAGCGGCTGGACGCCGAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS CAA 90 bp | AGGCCCCCGGGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTaGCTCTTGATCTGTGCCAGCTGCAAGTCGGACTCGGCGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPPGHSSWSCTARPR*LLICASCKSDSASS Trigger: GCTGGACGCCGAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 72 bp | GAGCTGCACGGCCCGGCCCAGGTTGCTCTTGATCTGTaGCAGCTGCAAGTCGGACTCGGCGTCCAGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ELHGPAQVALDL*QLQVGLGVQPL Trigger: GAGCGGCTGGACGCCGAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS GCA 72 bp | GTCCAGAAGAGGCCCCCGGGCCACAGCTCTTGGAGCTaGACGGCCCGGCCCAGGTTGCTCTTGATCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VQKRPPGHSSWS*TARPRLLLICA Trigger: GGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS CCA 72 bp | TTCCGCGTCCAGAAGAGGCCCCCGGGCCACAGCTCTTaGAGCTGCACGGCCCGGCCCAGGTTGCTCTTGATC | + |
|
Preference number: 6 (lower is better) Translates to: FRVQKRPPGHSS*SCTARPRLLLI Trigger: GATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACGCGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | TTTCCGCGTCCAGAAGAGGCCCCCGGGCCACAGCTCTaGGAGCTGCACGGCCCGGCCCAGGTTGCTCTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FPRPEEAPGPQL*ELHGPAQVALD Trigger: ATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACGCGGAAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | AGTGGAGAGTTTCCGCGTCCAGAAGAGGCCCCCGGGCCACAGCTCTaGGAGCTGCACGGCCCGGCCCAGGTTGCTCTTGATCTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGEFPRPEEAPGPQL*ELHGPAQVALDLCQ Trigger: CTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCCCGGGGGCCTCTTCTGGACGCGGAAACTCTCCACT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CCA 72 bp | AGGACCCAGAAGTCCCACGGAAAGCAACGAGGAGACTaGGTCTCCCCGGACTCGGCCGCGCCCCTGGAATCN | + |
|
Preference number: 6 (lower is better) Translates to: RTQKSHGKQRGD*VSPDSAAPLES Trigger: NGATTCCAGGGGCGCGGCCGAGTCCGGGGAGACCCAGTCTCCTCGTTGCTTTCCGTGGGACTTCTGGGTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154757.2 |
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| CDS CCA 72 bp | ATGGGAGCCGCTCGTCCCTATGCCCGGGTACGCCTGTaGCTCCCCAGAGCCTGGCACGTCAAGAGAAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: MGAARPYARVRL*LPRAWHVKRKD Trigger: GTCCTTTCTCTTGACGTGCCAGGCTCTGGGGAGCCACAGGCGTACCCGGGCATAGGGACGAGCGGCTCCCAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154757.2 |
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| CDS CAA 72 bp | AGCTCTTGGAGCTGCACGGCCCGGCCCAGGTTGCTCTaGATCTGTGCCAGCTGCAAGTCGGACTCGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSWSCTARPRLL*ICASCKSDSAS Trigger: GGACGCCGAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | GGCCACAGCTCTTGGAGCTGCACGGCCCGGCCCAGGTaGCTCTTGATCTGTGCCAGCTGCAAGTCGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: GHSSWSCTARPR*LLICASCKSDS Trigger: CGAGTCCGACTTGCAGCTGGCACAGATCAAGAGCAACCTGGGCCGGGCCGTGCAGCTCCAAGAGCTGTGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | GGATCTCTGCTTTCACAGGAAGTGGCTATACAGGTCCCCCAGTCATaGTATGTCTCCACTGTCATGTTGGACAGTGCCGTTCTCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSLLSQEVAIQVPQS*YVSTVMLDSAVLSS Trigger: GCTGCTGAGAACGGCACTGTCCAACATGACAGTGGAGACATACAATGACTGGGGGACCTGTATAGCCACTTCCTGTGAAAGCAGAGATCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 72 bp | CTCAATGGTGACTCCAAGAGCAGCTCAAAAAGCCAGTaGAGCTTCCGGGGATCTCTGCTTTCACAGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LNGDSKSSSKSQ*SFRGSLLSQEV Trigger: CACTTCCTGTGAAAGCAGAGATCCCCGGAAGCTTCACTGGCTTTTTGAGCTGCTCTTGGAGTCACCATTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | GTAGCATGTGTGTTGGCCCTTCGGGAAACCATTTGCTaGCTGATACCAAACTTCGGGCTACTCCAATTACAC | + |
|
Preference number: 6 (lower is better) Translates to: VACVLALRETIC*LIPNFGLLQLH Trigger: GTGTAATTGGAGTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGGGCCAACACACATGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | GAGGTAGCATGTGTGTTGGCCCTTCGGGAAACCATTTaGTGCCTGATACCAAACTTCGGGCTACTCCAATTA | + |
|
Preference number: 6 (lower is better) Translates to: EVACVLALRETI*CLIPNFGLLQL Trigger: TAATTGGAGTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGGGCCAACACACATGCTACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | TTCTGGGCAACACTTCACAGCAGCTCGGCACATGTCTaGCACCATGCGACCTGCAACTCTTGTTTCAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: FWATLHSSSAHV*HHATCNSCFKY Trigger: ATATTTGAAACAAGAGTTGCAGGTCGCATGGTGGCAGACATGTGCCGAGCTGCTGTGAAGTGTTGCCCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | AGAGGTAGCATGTGTGTTGGCCCTTCGGGAAACCATTaGCTGCCTGATACCAAACTTCGGGCTACTCCAATT | + |
|
Preference number: 6 (lower is better) Translates to: RGSMCVGPSGNH*LPDTKLRATPI Trigger: AATTGGAGTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGGGCCAACACACATGCTACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | GCCAGGTCTGCACAATACAGTCCCAATCATGAAGGTTaGCCAGGCACACACCACTGTGATTTCCAAGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ARSAQYSPNHEG*PGTHHCDFQVD Trigger: GTCTACTTGGAAATCACAGTGGTGTGTGCCTGGCAAACCTTCATGATTGGGACTGTATTGTGCAGACCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | CTTTCACAGGAAGTGGCTATACAGGTCCCCCAGTCATaGTATGTCTCCACTGTCATGTTGGACAGTGCCGTT | + |
|
Preference number: 6 (lower is better) Translates to: LSQEVAIQVPQS*YVSTVMLDSAV Trigger: AACGGCACTGTCCAACATGACAGTGGAGACATACAATGACTGGGGGACCTGTATAGCCACTTCCTGTGAAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | TGGGTGAGTTTTGGTTCCAAGTACTTCAGAAGTCTGTaGAATAGTTCAGGGACTCTCCACTCTTGCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: WVSFGSKYFRSL*NSSGTLHSCWA Trigger: TGCCCAGCAAGAGTGGAGAGTCCCTGAACTATTGCACAGACTTCTGAAGTACTTGGAACCAAAACTCACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | CCAGGTAGGAACATCATAAGGGCTAGAAAGAACACATaGACCAAGTCCAAGCACACCAGCATGACGTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGRNIIRARKNT*TKSKHTSMTFD Trigger: GTCAAACGTCATGCTGGTGTGCTTGGACTTGGTGCATGTGTTCTTTCTAGCCCTTATGATGTTCCTACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CCA 72 bp | GCAAAAGAGACTTCTTCTGAAGAAGGAACATGCCACTaGATCCCCAGATTCCACAAATCTCCAGGCTTACCC | + |
|
Preference number: 6 (lower is better) Translates to: AKETSSEEGTCH*IPRFHKSPGLP Trigger: GGGTAAGCCTGGAGATTTGTGGAATCTGGGGATCCAGTGGCATGTTCCTTCTTCAGAAGAAGTCTCTTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | CAAGTGCTGGCCAGGTCTGCACAATACAGTCCCAATCATGAAGGTTaGCCAGGCACACACCACTGTGATTTCCAAGTAGACAATATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: QVLARSAQYSPNHEG*PGTHHCDFQVDNIR Trigger: CCTTATATTGTCTACTTGGAAATCACAGTGGTGTGTGCCTGGCAAACCTTCATGATTGGGACTGTATTGTGCAGACCTGGCCAGCACTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | CTCATCAACAGAGGTAGCATGTGTGTTGGCCCTTCGGGAAACCATTaGCTGCCTGATACCAAACTTCGGGCTACTCCAATTACACAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LINRGSMCVGPSGNH*LPDTKLRATPITQF Trigger: AAATTGTGTAATTGGAGTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGGGCCAACACACATGCTACCTCTGTTGATGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 72 bp | CATGTGTGTTGGCCCTTCGGGAAACCATTTGCTGCCTaGTACCAAACTTCGGGCTACTCCAATTACACAATT | + |
|
Preference number: 6 (lower is better) Translates to: HVCWPFGKPFAA*YQTSGYSNYTI Trigger: AATTGTGTAATTGGAGTAGCCCGAAGTTTGGTATCAGGCAGCAAATGGTTTCCCGAAGGGCCAACACACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 72 bp | TTCTTCCCGTCTACACGAGTAATCTCAGACAGAAGCTaGAGGTTCCACAGCAACTCCTTGTCTAGCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: FFPSTRVISDRS*RFHSNSLSSSS Trigger: AGAAGAGCTAGACAAGGAGTTGCTGTGGAACCTTCAGCTTCTGTCTGAGATTACTCGTGTAGACGGGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | GGTATTACTAACTCAGGTCTCATAAGTGCAAGGTTCTaGAGAGCCTGGGCTGCTTCTAGACTACCAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GITNSGLISARF*RAWAASRLPVL Trigger: CAAAACTGGTAGTCTAGAAGCAGCCCAGGCTCTGCAGAACCTTGCACTTATGAGACCTGAGTTAGTAATACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | GGTAGGTCAGCACTGTATATCTTGCATGCCAAGAACTaGTTCTTGCTGTCTGGCTTAGCACCTGAAGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: GRSALYILHAKN*FLLSGLAPEVS Trigger: TGATACTTCAGGTGCTAAGCCAGACAGCAAGAAGCAGTTCTTGGCATGCAAGATATACAGTGCTGACCTACC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | ATACCATGGTCTGGAGGTAGGTCAGCACTGTATATCTaGCATGCCAAGAACTGCTTCTTGCTGTCTGGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: IPWSGGRSALYI*HAKNCFLLSGL Trigger: TAAGCCAGACAGCAAGAAGCAGTTCTTGGCATGCAAGATATACAGTGCTGACCTACCTCCAGACCATGGTAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | AAGCAGCTGGTCATCAGTGAACTGCTGCTTGTGTTCTaGCCAGTTGTCATGATGTGTCCTTCGGAAATTGGA | + |
|
Preference number: 6 (lower is better) Translates to: KQLVISELLLVF*PVVMMCPSEIG Trigger: TCCAATTTCCGAAGGACACATCATGACAACTGGCAAGAACACAAGCAGCAGTTCACTGATGACCAGCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | GGTTATAAAATACCATGGTCTGGAGGTAGGTCAGCACTGTATATCTaGCATGCCAAGAACTGCTTCTTGCTGTCTGGCTTAGCACCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GYKIPWSGGRSALYI*HAKNCFLLSGLAPE Trigger: TTCAGGTGCTAAGCCAGACAGCAAGAAGCAGTTCTTGGCATGCAAGATATACAGTGCTGACCTACCTCCAGACCATGGTATTTTATAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 72 bp | CGATGTAATCTCCTAACAACACTGTTTGGCAACCGCTaGAGGAGTTTCATTAACTTGTTCAGCCAACGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RCNLLTTLFGNR*RSFINLFSQRP Trigger: TGGGCGTTGGCTGAACAAGTTAATGAAACTCCTTCAGCGGTTGCCAAACAGTGTTGTTAGGAGATTACATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | AACACTTCACAGCAGCTCGGCACATGTCTGCCACCATaGGACCTGCAACTCTTGTTTCAAATATATGTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NTSQQLGTCLPP*DLQLLFQIYVK Trigger: TTTCACATATATTTGAAACAAGAGTTGCAGGTCGCATGGTGGCAGACATGTGCCGAGCTGCTGTGAAGTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | GTCAGGTGTAAGGTTCGCTGGAGAATCTTTACAAGCTaGTCCCTATACAGAAGTAACTTCTTCCCGTCTACA | + |
|
Preference number: 6 (lower is better) Translates to: VRCKVRWRIFTS*SLYRSNFFPST Trigger: TGTAGACGGGAAGAAGTTACTTCTGTATAGGGAGCAGCTTGTAAAGATTCTCCAGCGAACCTTACACCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | TTTCCAAGTAGACAATATAAGGCGCCCTTGAACTGCTaGTGTGTGACATCCTTTCTATCAGGCCGTAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: FPSRQYKAPLNC*CVTSFLSGRRN Trigger: ATTCCTACGGCCTGATAGAAAGGATGTCACACAGCAGCAGTTCAAGGGCGCCTTATATTGTCTACTTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | TCAGCACTGTATATCTTGCATGCCAAGAACTGCTTCTaGCTGTCTGGCTTAGCACCTGAAGTATCAAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SALYILHAKNCF*LSGLAPEVSKA Trigger: TGCCTTTGATACTTCAGGTGCTAAGCCAGACAGCAAGAAGCAGTTCTTGGCATGCAAGATATACAGTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | GTAAGCTTATGGCTTTCAGGCACAGGAGTTAACCAGGAGGGCTTCTaGAATCTTTCACGATGTAATCTCCTAACAACACTGTTTGGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: VSLWLSGTGVNQEGF*NLSRCNLLTTLFGN Trigger: GTTGCCAAACAGTGTTGTTAGGAGATTACATCGTGAAAGATTCAAGAAGCCCTCCTGGTTAACTCCTGTGCCTGAAAGCCATAAGCTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | TCCCTTAGGAGTAGAGACAGAAGCCCGATTCCTATATaGTCAAATTTCCAAGGCAGATTTCTTTGCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SLRSRDRSPIPI*SNFQGRFLCST Trigger: TGTGGAGCAAAGAAATCTGCCTTGGAAATTTGAGCATATAGGAATCGGGCTTCTGTCTCTACTCCTAAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 72 bp | TCAGTGAACTGCTGCTTGTGTTCTTGCCAGTTGTCATaGTGTGTCCTTCGGAAATTGGATAAGGTCTTCTTT | + |
|
Preference number: 6 (lower is better) Translates to: SVNCCLCSCQLS*CVLRKLDKVFF Trigger: AAAGAAGACCTTATCCAATTTCCGAAGGACACATCATGACAACTGGCAAGAACACAAGCAGCAGTTCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | TCACAACCCTCAACAGTTAGTGTTCGCAACTCATGCTaGAGCATCACTCTGTCAATTAGTAATGCTCTGATA | + |
|
Preference number: 6 (lower is better) Translates to: SQPSTVSVRNSC*SITLSISNALI Trigger: TATCAGAGCATTACTAATTGACAGAGTGATGCTGCAGCATGAGTTGCGAACACTAACTGTTGAGGGTTGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 72 bp | ACATTAAAGGCCGCCATTCTTCTAACATTTCTGCTGTaGAATCTGCTGGAAAGTATGGTCGGCAGCTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: TLKAAILLTFLL*NLLESMVGSFS Trigger: TGAAAAGCTGCCGACCATACTTTCCAGCAGATTCAACAGCAGAAATGTTAGAAGAATGGCGGCCTTTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000154757.2 |
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| CDS CAA 72 bp | CTCTGGATAGGTCATGTTCCAGTCCGGTATACAATTTaGTTTCCTCTAAGGAGACCATACTTGGTACCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: LWIGHVPVRYTI*FPLRRPYLVPS Trigger: ACTTGGTACCAAGTATGGTCTCCTTAGAGGAAACAAAATTGTATACCGGACTGGAACATGACCTATCCAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | ATTTTCCACTGGAGCGATCTTAAAGAACAAAGGCAGAAGCTGAAGTaGCTCTTTGACTGCTGTAGAAAAAGATCTTCCTGCACTTGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: IFHWSDLKEQRQKLK*LFDCCRKRSSCTCH Trigger: ATGGCAAGTGCAGGAAGATCTTTTTCTACAGCAGTCAAAGAGCAACTTCAGCTTCTGCCTTTGTTCTTTAAGATCGCTCCAGTGGAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS TCA 72 bp | GCTATAATTTCTGCAACACATCTCTGGGTACTTTCATaGGAATCTGCAACCAAACGTTCTAAATGGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: AIISATHLWVLS*ESATKRSKWGF Trigger: GAAGCCCCATTTAGAACGTTTGGTTGCAGATTCTCATGAAAGTACCCAGAGATGTGTTGCAGAAATTATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | AGATTTACTAATTGCCCCTCCCACTGTGGGAGATTTTaGACTGAAACCCAAAGGCCAATTAATTCATCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RFTNCPSHCGRF*TETQRPINSSN Trigger: GTTTGATGAATTAATTGGCCTTTGGGTTTCAGTGCAAAATCTCCCACAGTGGGAGGGGCAATTAGTAAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS GCA 72 bp | AAAGAACAAAGGCAGAAGCTGAAGTTGCTCTTTGACTaGTGTAGAAAAAGATCTTCCTGCACTTGCCATAAG | + |
|
Preference number: 6 (lower is better) Translates to: KEQRQKLKLLFD*CRKRSSCTCHK Trigger: CTTATGGCAAGTGCAGGAAGATCTTTTTCTACAGCAGTCAAAGAGCAACTTCAGCTTCTGCCTTTGTTCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000129824.2 |
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| CDS CAA 90 bp | TCCATATTACAGCATGTCCTATATCATAAGCATTTGTTAAAAATCTaGGGACTAAAACTTGACTGCTTCCCACTGGGAGGTTCAGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SILQHVLYHKHLLKI*GLKLDCFPLGGSGF Trigger: GAAGCCTGAACCTCCCAGTGGGAAGCAGTCAAGTTTTAGTCCCAAGATTTTTAACAAATGCTTATGATATAGGACATGCTGTAATATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CCA 72 bp | GCGAGCAGTAAACTCAGGGATACAAGGAGATGTTGTTaGAGCAGTATTTGGCAAAGAAACATCTATCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: ASSKLRDTRRCC*SSIWQRNIYHK Trigger: TTTATGATAGATGTTTCTTTGCCAAATACTGCTCCAACAACATCTCCTTGTATCCCTGAGTTTACTGCTCGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000129824.2 |
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| CDS TCA 72 bp | ACTCCAATTACACAATTTAAAGTAGCTGTGAGCTGGTaGGGTTCTGTTAATGTCTCTAAAGCAGGGTATGTT | + |
|
Preference number: 6 (lower is better) Translates to: TPITQFKVAVSW*GSVNVSKAGYV Trigger: AACATACCCTGCTTTAGAGACATTAACAGAACCTCACCAGCTCACAGCTACTTTAAATTGTGTAATTGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CCA 72 bp | CTCAGGGATACAAGGAGATGTTGTTGGAGCAGTATTTaGCAAAGAAACATCTATCATAAATATGTAGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRDTRRCCWSSI*QRNIYHKYVGQ Trigger: CTGACCTACATATTTATGATAGATGTTTCTTTGCCAAATACTGCTCCAACAACATCTCCTTGTATCCCTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000129824.2 |
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| CDS TCA 72 bp | TTTGTACTAATTTACTTGGTCCACCCATCATTGCGGTaGTCCATATTACAGCATGTCCTATATCATAAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FVLIYLVHPSLR*SILQHVLYHKH Trigger: ATGCTTATGATATAGGACATGCTGTAATATGGATCACCGCAATGATGGGTGGACCAAGTAAATTAGTACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
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| CDS CAA 90 bp | GTTGAATCTGCTGGAAAGTATGGTCGGCAGCTTTTCACCAGTGTTTaGAGAACATTTTCTATAGAATTAGGAAATGAATTTAATCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VESAGKYGRQLFTSV*RTFSIELGNEFNLR Trigger: CCTGAGATTAAATTCATTTCCTAATTCTATAGAAAATGTTCTCAAAACACTGGTGAAAAGCTGCCGACCATACTTTCCAGCAGATTCAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000154757.2 |
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| CDS CAA 90 bp | AAGTGCAGAAGGTCTCCAATGATCTTTATGATGAGAAACAGTGATTaGGTATCATCTTCTGAATTATCAAGTATGTGGCTAAGAAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KCRRSPMIFMMRNSD*VSSSELSSMWLRSF Trigger: GAAACTTCTTAGCCACATACTTGATAATTCAGAAGATGATACCAAATCACTGTTTCTCATCATAAAGATCATTGGAGACCTTCTGCACTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041231.14 |
||
| CDS TCA 72 bp | AGCCATTTCAATATAGTTTTTAAGAGTTTAATGCCCTaGGTTCGTTCATCTTCTTCACCAATGCCATTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SHFNIVFKSLMP*VRSSSSPMPFS Trigger: AGAAAATGGCATTGGTGAAGAAGATGAACGAACTCAGGGCATTAAACTCTTAAAAACTATATTGAAATGGCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041231.14 ENSMUST00000129824.2 |
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