Pregenerated sensors for PSMD9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029440Ensembl transcript IDs: ENSMUST00000100729.9, ENSMUST00000197809.2, ENSMUST00000198183.2
Found 125 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCACAGCCTCAGCCTCAGAGGATGCATCAGGCTCTCAAAGCACTaGTCCAGGGTAGAGACTGCCAGCTGCTCAGCCCACGGAGGGACA | + |
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Preference number: 1 (lower is better) Translates to: LHSLSLRGCIRLSKH*SRVETASCSAHGGT Trigger: TGTCCCTCCGTGGGCTGAGCAGCTGGCAGTCTCTACCCTGGAGCAGTGCTTTGAGAGCCTGATGCATCCTCTGAGGCTGAGGCTGTGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 90 bp | GACCAGGGCAGCAAGATCCCAAGGGTAAGGCCAGTGCGGGTACACTaGGCTCCAGGCCAGTCTGAACTTGTGAGATCCGGTCTCCAGCAA | + |
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Preference number: 1 (lower is better) Translates to: DQGSKIPRVRPVRVH*APGQSELVRSGLQQ Trigger: TTGCTGGAGACCGGATCTCACAAGTTCAGACTGGCCTGGAGCTCAGTGTACCCGCACTGGCCTTACCCTTGGGATCTTGCTGCCCTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 90 bp | AGGCTAGCCTCAAACTCTGAGATCTGCCTGCCTCTCTCTGCCTCCTaGGTGCTGGGATTAAAGGTGTACACCACCACCGCCCGGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: RLASNSEICLPLSAS*VLGLKVYTTTARWG Trigger: TCCCCACCGGGCGGTGGTGGTGTACACCTTTAATCCCAGCACTCAGGAGGCAGAGAGAGGCAGGCAGATCTCAGAGTTTGAGGCTAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR GCA 90 bp | CTCCAGGGTAGAGACTGCCAGCTGCTCAGCCCACGGAGGGACACTTaGCTAGAGTCTGAGCTCCGGCTTTCAGTTTCCCACCCAAGAATC | + |
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Preference number: 1 (lower is better) Translates to: LQGRDCQLLSPRRDT*LESELRLSVSHPRI Trigger: GATTCTTGGGTGGGAAACTGAAAGCCGGAGCTCAGACTCTAGGCAAGTGTCCCTCCGTGGGCTGAGCAGCTGGCAGTCTCTACCCTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 90 bp | GAGCCACCACACCTGGTCTTTGCTGATTTCTTAATGGGGCTACGGTaGCTCCACAGCCTCAGCCTCAGAGGATGCATCAGGCTCTCAAAG | + |
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Preference number: 1 (lower is better) Translates to: EPPHLVFADFLMGLR*LHSLSLRGCIRLSK Trigger: CTTTGAGAGCCTGATGCATCCTCTGAGGCTGAGGCTGTGGAGTCACCGTAGCCCCATTAAGAAATCAGCAAAGACCAGGTGTGGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 90 bp | GGTACTCAAGTCCTGTGGAGGTTAGGGGTGTGGTCTCTGGAAGGTTaGCCACATTCCTCCAGTGGAAGATCCCACACCATGAATATACTG | + |
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Preference number: 1 (lower is better) Translates to: GTQVLWRLGVWSLEG*PHSSSGRSHTMNIL Trigger: CAGTATATTCATGGTGTGGGATCTTCCACTGGAGGAATGTGGTCAACCTTCCAGAGACCACACCCCTAACCTCCACAGGACTTGAGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 90 bp | AGGGAGAGACAGCAGAAGAGAACATCTTCAGCTTCAAGGCAAATCTaGGGCTGGACTGGGCTACATGAGACCCTGCTTCCAAGAAAAAGT | + |
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Preference number: 1 (lower is better) Translates to: RERQQKRTSSASRQI*GWTGLHETLLPRKS Trigger: ACTTTTTCTTGGAAGCAGGGTCTCATGTAGCCCAGTCCAGCCTCAGATTTGCCTTGAAGCTGAAGATGTTCTCTTCTGCTGTCTCTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 90 bp | GCAAGAACCTGGGAAGTGGGTACGAGGGGAGGTCTGAGAGGGACTTaGGATGACAGGAAATATAGAAATGTACTATGTGCATGTACGAAA | + |
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Preference number: 1 (lower is better) Translates to: ARTWEVGTRGGLRGT*DDRKYRNVLCACTK Trigger: TTTCGTACATGCACATAGTACATTTCTATATTTCCTGTCATCTCAAGTCCCTCTCAGACCTCCCCTCGTACCCACTTCCCAGGTTCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 90 bp | AACAAAAGAGGGCAAGAACCTGGGAAGTGGGTACGAGGGGAGGTCTaGGAGGGACTTGAGATGACAGGAAATATAGAAATGTACTATGTG | + |
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Preference number: 1 (lower is better) Translates to: NKRGQEPGKWVRGEV*EGLEMTGNIEMYYV Trigger: CACATAGTACATTTCTATATTTCCTGTCATCTCAAGTCCCTCTCAGACCTCCCCTCGTACCCACTTCCCAGGTTCTTGCCCTCTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR TCA 90 bp | ACCGCCCGGTGGGGAGGCTCAACTATAAAAGCCAAATCAGGCCCATCTGCGGGGCCAGTGCGGGTACACTaGGCTCCAGGCCAGTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: TARWGGSTIKAKSGPSAGPVRVH*APGQSE Trigger: TTCAGACTGGCCTGGAGCTCAGTGTACCCGCACTGG...CCCCGCAGATGGGCCTGATTTGGCTTTTATAGTTGAGCCTCCCCACCGGGCGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR TCA 90 bp | ACCGCCCGGTGGGGAGGCTCAACTATAAAAGCCAAATCAGGCCCATCTGCGGGGCCTGCCCCTGCCTCCTaGGTGCTGGGATTAAAACGT | + |
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Preference number: 2 (lower is better) Translates to: TARWGGSTIKAKSGPSAGPAPAS*VLGLKR Trigger: ACGTTTTAATCCCAGCACTCAGGAGGCAGGGGCAGG...CCCCGCAGATGGGCCTGATTTGGCTTTTATAGTTGAGCCTCCCCACCGGGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR GCA 90 bp | TGCTTCGCAGGACTTCCTTCCCAACTCCTCCTGGGCTTGGCTGTGAGCTCACAGGCTGAGGCAGCTTCCTaGAGGCAGATCCCAGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: CFAGLPSQLLLGLAVSSQAEAAS*RQIPGN Trigger: GTTTCCTGGGATCTGCCTGCAGGAAGCTGCCTCAGC...CTGTGAGCTCACAGCCAAGCCCAGGAGGAGTTGGGAAGGAAGTCCTGCGAAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR CAA 90 bp | GGTCTCCAGCAAGCCCCCACCCCTAGGCGGTGGGTGATACTGCAGTaGGACATTGGAGGGAGAGACAGCAGAAGAGAACATCTTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GLQQAPTPRRWVILQ*DIGGRDSRREHLQL Trigger: AAGCTGAAGATGTTCTCTTCTGCTGTCTCTCCCTCCAATGTCCAACTGCAGTATCACCCACCGCCTAGGGGTGGGGGCTTGCTGGAGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAATATCATACTGGGTAACCTGCAAGGCCTCGTGACCTGTGACCTTTGCAAAAAGCACGGGGCCAGCTaGGGCAGCTTCCTGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: ANIILGNLQGLVTCDLCKKHGAS*GSFLQA Trigger: TGCCTGCAGGAAGCTGCCTCAGCTGGCCCCGTGCTT...TTTGCAAAGGTCACAGGTCACGAGGCCTTGCAGGTTACCCAGTATGATATTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGCCTCAGAGGATGCATCAGGCTCTCAAAGCACTGCTCCAGGGTAGAGACCTGGACTGGGCTACATaGGACCCTGCTTCCAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: PQPQRMHQALKALLQGRDLDWAT*DPASKK Trigger: TTTCTTGGAAGCAGGGTCTCATGTAGCCCAGTCCAG...GTCTCTACCCTGGAGCAGTGCTTTGAGAGCCTGATGCATCCTCTGAGGCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCAGCCTCAGAGGATGCATCAGGCTCTCAAAGCACTGCTCCAGGGTAGAGACGCTTCAAGGCAAATCTaGGGCTGGACTGGGCTACAT | + |
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Preference number: 2 (lower is better) Translates to: PQPQRMHQALKALLQGRDASRQI*GWTGLH Trigger: ATGTAGCCCAGTCCAGCCTCAGATTTGCCTTGAAGC...GTCTCTACCCTGGAGCAGTGCTTTGAGAGCCTGATGCATCCTCTGAGGCTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR GCA 90 bp | ACCGCCCGGTGGGGAGGCTCAACTATAAAAGCCAAATCAGGCCCATCTGCGGGGGGCTACATGAGACCCTaGTTCCAAGAAAAAGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: TARWGGSTIKAKSGPSAGGYMRP*FQEKVG Trigger: CCCTACTTTTTCTTGGAAGCAGGGTCTCATGTAGCC...CCCCGCAGATGGGCCTGATTTGGCTTTTATAGTTGAGCCTCCCCACCGGGCGGT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR GCA 90 bp | CAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGCAAGGCCTCACTCAGAAATCCGCCTaGCCCTGCCTCCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QWVTEEEANIILGNLQGLTQKSA*PCLLSA Trigger: AGCACTCAGGAGGCAGGGGCAGGCGGATTTCTGAGT...GAGGCCTTGCAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGCAAGGCCTCCTGTGTAGCCTTCCTTaGCTGTCCTGGAGCTCACTC | + |
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Preference number: 2 (lower is better) Translates to: QWVTEEEANIILGNLQGLLCSLP*LSWSSL Trigger: GAGTGAGCTCCAGGACAGCCAAGGAAGGCTACACAG...GAGGCCTTGCAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR TCA 90 bp | CAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGCAAGGCCTCTGGTCTCTGGAAGGTTaGCCACATTCCTCCAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: QWVTEEEANIILGNLQGLWSLEG*PHSSSG Trigger: TCCACTGGAGGAATGTGGTCAACCTTCCAGAGACCA...GAGGCCTTGCAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAATATCATACTGGGTAACCTGCAAGGCCTCGTGACCTGTGACCTTTGCAAAACCACATTCCTCCAGTaGAAGATCCCACACCATGAA | + |
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Preference number: 2 (lower is better) Translates to: ANIILGNLQGLVTCDLCKTTFLQ*KIPHHE Trigger: TTCATGGTGTGGGATCTTCCACTGGAGGAATGTGGT...TTTGCAAAGGTCACAGGTCACGAGGCCTTGCAGGTTACCCAGTATGATATTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR CCA 90 bp | ACACAGCTACAAGACTGGCTTTATCTGACAGTTTCTCTAACCTGTAACAAGGTTAGCTCAAGGCCAGCCTaGTCTACACAGGGAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: TQLQDWLYLTVSLTCNKVSSRPA*STQGIP Trigger: TGGAATTCCCTGTGTAGACCAGGCTGGCCTTGAGCT...AACCTTGTTACAGGTTAGAGAAACTGTCAGATAAAGCCAGTCTTGTAGCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR TCA 90 bp | GCCAATATCATACTGGGTAACCTGCAAGGCCTCGTGACCTGTGACCTTTGCAAATCTCCAAAAGGAAAATaGCATCAAATCATTACTCGC | + |
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Preference number: 2 (lower is better) Translates to: ANIILGNLQGLVTCDLCKSPKGK*HQIITR Trigger: GCGAGTAATGATTTGATGTCATTTTCCTTTTGGAGA...TTTGCAAAGGTCACAGGTCACGAGGCCTTGCAGGTTACCCAGTATGATATTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTTTCCAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGGTGACCTGTGACCTTTaGAAATTTTGTTTTGAGACA | + |
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Preference number: 2 (lower is better) Translates to: AGFQWVTEEEANIILGNLVTCDL*KFCFET Trigger: TGTCTCAAAACAAAATTTGCAAAGGTCACAGGTCAC...CAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTGGAAACCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | TGCGGGTACACTGAGCTCCAGGCCAGTCTGAACTTGTaGGATCCGGTCTCCAGCAAGCCCCCACCCCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: CGYTELQASLNL*DPVSSKPPPLG Trigger: GCCTAGGGGTGGGGGCTTGCTGGAGACCGGATCTCACAAGTTCAGACTGGCCTGGAGCTCAGTGTACCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | AAGGCCAGTGCGGGTACACTGAGCTCCAGGCCAGTCTaGACTTGTGAGATCCGGTCTCCAGCAAGCCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: KASAGTLSSRPV*TCEIRSPASPH Trigger: GTGGGGGCTTGCTGGAGACCGGATCTCACAAGTTCAGACTGGCCTGGAGCTCAGTGTACCCGCACTGGCCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR CCA 72 bp | AGATCCGGTCTCCAGCAAGCCCCCACCCCTAGGCGGTaGGTGATACTGCAGTTGGACATTGGAGGGAGAGAC | + |
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Preference number: 3 (lower is better) Translates to: RSGLQQAPTPRR*VILQLDIGGRD Trigger: GTCTCTCCCTCCAATGTCCAACTGCAGTATCACCCACCGCCTAGGGGTGGGGGCTTGCTGGAGACCGGATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR GCA 72 bp | CATCAGGCTCTCAAAGCACTGCTCCAGGGTAGAGACTaGCAGCTGCTCAGCCCACGGAGGGACACTTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: HQALKALLQGRD*QLLSPRRDTCL Trigger: TAGGCAAGTGTCCCTCCGTGGGCTGAGCAGCTGGCAGTCTCTACCCTGGAGCAGTGCTTTGAGAGCCTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR GCA 72 bp | CTCAGCCTCAGAGGATGCATCAGGCTCTCAAAGCACTaGTCCAGGGTAGAGACTGCCAGCTGCTCAGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: LSLRGCIRLSKH*SRVETASCSAH Trigger: GTGGGCTGAGCAGCTGGCAGTCTCTACCCTGGAGCAGTGCTTTGAGAGCCTGATGCATCCTCTGAGGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR CAA 90 bp | ACCGCCCGGTGGGGAGGCTCAACTATAAAAGCCAAATCAGGCCCATCTGCGGGGTACTGCAGTTGGACATaGGAGGGAGAGACAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: TARWGGSTIKAKSGPSAGYCSWT*EGETAE Trigger: TTCTGCTGTCTCTCCCTCCAATGTCCAACTGCAGTA...CCCCGCAGATGGGCCTGATTTGGCTTTTATAGTTGAGCCTCCCCACCGGGCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | AGCAAGATCCCAAGGGTAAGGCCAGTGCGGGTACACTaGGCTCCAGGCCAGTCTGAACTTGTGAGATCCGGT | + |
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Preference number: 3 (lower is better) Translates to: SKIPRVRPVRVH*APGQSELVRSG Trigger: ACCGGATCTCACAAGTTCAGACTGGCCTGGAGCTCAGTGTACCCGCACTGGCCTTACCCTTGGGATCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | GTCCTGTGGAGGTTAGGGGTGTGGTCTCTGGAAGGTTaGCCACATTCCTCCAGTGGAAGATCCCACACCATG | + |
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Preference number: 3 (lower is better) Translates to: VLWRLGVWSLEG*PHSSSGRSHTM Trigger: CATGGTGTGGGATCTTCCACTGGAGGAATGTGGTCAACCTTCCAGAGACCACACCCCTAACCTCCACAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR GCA 72 bp | ACCAGGCTGGCCTTAACTCAGAAATCCGCCTGCCCCTaGCTCCTGAGTGCTGGGATTAAAACGTTTGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: TRLALTQKSACP*LLSAGIKTFEP Trigger: TGGCTCAAACGTTTTAATCCCAGCACTCAGGAGGCAGGGGCAGGCGGATTTCTGAGTTAAGGCCAGCCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR CCA 72 bp | GTGCTGGGATTAAAGGTGTACACCACCACCGCCCGGTaGGGAGGCTCAACTATAAAAGCCAAATCAGGCCCA | + |
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Preference number: 3 (lower is better) Translates to: VLGLKVYTTTAR*GGSTIKAKSGP Trigger: TGGGCCTGATTTGGCTTTTATAGTTGAGCCTCCCCACCGGGCGGTGGTGGTGTACACCTTTAATCCCAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | CACCTGGTCTTTGCTGATTTCTTAATGGGGCTACGGTaGCTCCACAGCCTCAGCCTCAGAGGATGCATCAGG | + |
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Preference number: 3 (lower is better) Translates to: HLVFADFLMGLR*LHSLSLRGCIR Trigger: CCTGATGCATCCTCTGAGGCTGAGGCTGTGGAGTCACCGTAGCCCCATTAAGAAATCAGCAAAGACCAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | GGGCAAGAACCTGGGAAGTGGGTACGAGGGGAGGTCTaGGAGGGACTTGAGATGACAGGAAATATAGAAATG | + |
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Preference number: 3 (lower is better) Translates to: GQEPGKWVRGEV*EGLEMTGNIEM Trigger: CATTTCTATATTTCCTGTCATCTCAAGTCCCTCTCAGACCTCCCCTCGTACCCACTTCCCAGGTTCTTGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | CAGCAGAAGAGAACATCTTCAGCTTCAAGGCAAATCTaGGGCTGGACTGGGCTACATGAGACCCTGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: QQKRTSSASRQI*GWTGLHETLLP Trigger: TGGAAGCAGGGTCTCATGTAGCCCAGTCCAGCCTCAGATTTGCCTTGAAGCTGAAGATGTTCTCTTCTGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR GCA 72 bp | GGCAAATCTGAGGCTGGACTGGGCTACATGAGACCCTaGTTCCAAGAAAAAGTAGGGGTACTCAAGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GKSEAGLGYMRP*FQEKVGVLKSC Trigger: ACAGGACTTGAGTACCCCTACTTTTTCTTGGAAGCAGGGTCTCATGTAGCCCAGTCCAGCCTCAGATTTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR CCA 72 bp | GGTGTGGTCTCTGGAAGGTTGACCACATTCCTCCAGTaGAAGATCCCACACCATGAATATACTGACAGCACA | + |
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Preference number: 3 (lower is better) Translates to: GVVSGRLTTFLQ*KIPHHEYTDST Trigger: TGTGCTGTCAGTATATTCATGGTGTGGGATCTTCCACTGGAGGAATGTGGTCAACCTTCCAGAGACCACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR CAA 90 bp | GCTGGTTTCCAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGCTGGGATTAAAACGTTaGAGCCACCACACCTGGTCT | + |
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Preference number: 3 (lower is better) Translates to: AGFQWVTEEEANIILGNLLGLKR*SHHTWS Trigger: AGACCAGGTGTGGTGGCTCAAACGTTTTAATCCCAG...CAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTGGAAACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR-3UTR CAA 90 bp | ACACAGCTACAAGACTGGCTTTATCTGACAGTTTCTCTAACCTGTAACAAGGTTGTGGTCTCTGGAAGGTaGACCACATTCCTCCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: TQLQDWLYLTVSLTCNKVVVSGR*TTFLQW Trigger: CCACTGGAGGAATGTGGTCAACCTTCCAGAGACCAC...AACCTTGTTACAGGTTAGAGAAACTGTCAGATAAAGCCAGTCTTGTAGCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | TGGGAAGTGGGTACGAGGGGAGGTCTGAGAGGGACTTaGGATGACAGGAAATATAGAAATGTACTATGTGCA | + |
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Preference number: 3 (lower is better) Translates to: WEVGTRGGLRGT*DDRKYRNVLCA Trigger: TGCACATAGTACATTTCTATATTTCCTGTCATCTCAAGTCCCTCTCAGACCTCCCCTCGTACCCACTTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | AAGCCAATATCATACTGGGTAACCTGCAAGGCCTCGTaGCCTGTGACCTTTGCAAATTTTGTTTTGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: KPISYWVTCKAS*PVTFANFVLRQ Trigger: CTGTCTCAAAACAAAATTTGCAAAGGTCACAGGTCACGAGGCCTTGCAGGTTACCCAGTATGATATTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR CCA 72 bp | GGACTGACAGTGGTCACAATCACACAGCTACAAGACTaGCTTTATCTGACAGTTTCTCTAACCTGTAACAAG | + |
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Preference number: 3 (lower is better) Translates to: GLTVVTITQLQD*LYLTVSLTCNK Trigger: CTTGTTACAGGTTAGAGAAACTGTCAGATAAAGCCAGTCTTGTAGCTGTGTGATTGTGACCACTGTCAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| 3UTR TCA 72 bp | TACACAGGGAATTCCAGGATAGTCAGGATTACACACTaGGTCCGTCTCCAAAAGGAAAATGACATCAAATCA | + |
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Preference number: 3 (lower is better) Translates to: YTGNSRIVRITH*VRLQKENDIKS Trigger: TGATTTGATGTCATTTTCCTTTTGGAGACGGACTCAGTGTGTAATCCTGACTATCCTGGAATTCCCTGTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS-3UTR GCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCCGAGCGTGCAGCTGGTaGAGGGCCTCCTCCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASRACSW*RASSTC Trigger: GCAAGTGGAGGAGGCCCTGCACCAGCTGCACGCTCG...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS-3UTR CCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCTCCCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASSRACS*CRASST Trigger: AGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGGGA...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS-3UTR CCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCACTCTGGCAAAGGCCTaGGGCAGGACGGGGCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASTLAKA*GRTGLL Trigger: CAACAGCCCCGTCCTGCCCCAGGCCTTTGCCAGAGT...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS-3UTR GCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCGCCATGTCCCGAGCCTaGTTCTCTTTGTCCCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASAMSRA*FSLSRA Trigger: CGCTCGGGACAAAGAGAAGCAGGCTCGGGACATGGC...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCTCCTGCCCAGCGGGTTaGAATCAGTCTGAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASSCPAG*NQSELV Trigger: CACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGA...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCCAGCAGTCCTTTTCCTaGCCAGCGGGTTGGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASQQSFS*PAGWNQ Trigger: CTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTG...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCATCAGTCTGAGCTGGTaGTTCTCTCCTCTGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASISLSW*FSPLRI Trigger: GATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGAT...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR GCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCACAGTGCCCACGTTCTaGACTGACTGGAAGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASTVPTF*TDWKFW Trigger: CCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGT...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCACTGACTGGAAGTTTTaGGTGTTCACGGAGCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASTDWKF*VFTEPN Trigger: GTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGT...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCCATTCTGGAGACAGATaGTGTTGTGCCTTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASHSGDR*CCALLF Trigger: GAACAGCAAGGCACAACATCATCTGTCTCCAGAATG...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR TCA 90 bp | ACCGCCCGGTGGGGAGGCTCAACTATAAAAGCCAAATCAGGCCCATCTGCGGGGGGGTTGGAATCAGTCTaGGCTGGTGCTTCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TARWGGSTIKAKSGPSAGGLESV*AGASLL Trigger: GAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCC...CCCCGCAGATGGGCCTGATTTGGCTTTTATAGTTGAGCCTCCCCACCGGGCGGT 59% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR GCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCGATGATGTTGTGCCTTaGTGTTCGGACCTGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASDDVVP*CSDLVQ Trigger: TTGTACCAGGTCCGAACAGCAAGGCACAACATCATC...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR CCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCACGTTCTGCACTGACTaGAAGTTTTGGGTGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASTFCTD*KFWVFT Trigger: CGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGT...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR TCA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCTTCATCAGTGCCTTGTaGTCATTCTGGAGACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: ENEETPPGPSTGPAEAASFISAL*SFWRQM Trigger: CATCTGTCTCCAGAATGATCACAAGGCACTGATGAA...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCTGCTCAGCCCACGGAGGGACACTTGCCTAGAGTCTGAGCTCCGGCTTGATGATGTTGTGCCTTaGTGTTCGGACCTGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: CQLLSPRRDTCLESELRLDDVVP*CSDLVQ Trigger: TTGTACCAGGTCCGAACAGCAAGGCACAACATCATC...AAGCCGGAGCTCAGACTCTAGGCAAGTGTCCCTCCGTGGGCTGAGCAGCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR GCA 90 bp | GCCAATATCATACTGGGTAACCTGCAAGGCCTCGTGACCTGTGACCTTTGCAAACGAGCGTGCAGCTGGTaGAGGGCCTCCTCCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ANIILGNLQGLVTCDLCKRACSW*RASSTC Trigger: GCAAGTGGAGGAGGCCCTGCACCAGCTGCACGCTCG...TTTGCAAAGGTCACAGGTCACGAGGCCTTGCAGGTTACCCAGTATGATATTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CCA 90 bp | GGTCTACACAGGGAATTCCAGGATAGTCAGGATTACACACTGAGTCCGTCTCCATCCCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GLHREFQDSQDYTLSPSPSRACS*CRASST Trigger: AGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGGGA...TGGAGACGGACTCAGTGTGTAATCCTGACTATCCTGGAATTCCCTGTGTAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| 3UTR CAA 72 bp | CAAGCCCCCACCCCTAGGCGGTGGGTGATACTGCAGTaGGACATTGGAGGGAGAGACAGCAGAAGAGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QAPTPRRWVILQ*DIGGRDSRREH Trigger: ATGTTCTCTTCTGCTGTCTCTCCCTCCAATGTCCAACTGCAGTATCACCCACCGCCTAGGGGTGGGGGCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CCA 90 bp | GCCAATATCATACTGGGTAACCTGCAAGGCCTCGTGACCTGTGACCTTTGCAAAACTCTGGCAAAGGCCTaGGGCAGGACGGGGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ANIILGNLQGLVTCDLCKTLAKA*GRTGLL Trigger: CAACAGCCCCGTCCTGCCCCAGGCCTTTGCCAGAGT...TTTGCAAAGGTCACAGGTCACGAGGCCTTGCAGGTTACCCAGTATGATATTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR GCA 90 bp | GGTCTACACAGGGAATTCCAGGATAGTCAGGATTACACACTGAGTCCGTCTCCAGCCATGTCCCGAGCCTaGTTCTCTTTGTCCCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: GLHREFQDSQDYTLSPSPAMSRA*FSLSRA Trigger: CGCTCGGGACAAAGAGAAGCAGGCTCGGGACATGGC...TGGAGACGGACTCAGTGTGTAATCCTGACTATCCTGGAATTCCCTGTGTAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CCA 90 bp | GAGACAGCAGAAGAGAACATCTTCAGCTTCAAGGCAAATCTGAGGCTGGACTGGGCCCGCAATACTGGCTaGGGAACCGGGGCTGATACT | + |
|
Preference number: 4 (lower is better) Translates to: ETAEENIFSFKANLRLDWARNTG*GTGADT Trigger: AGTATCAGCCCCGGTTCCCCAGCCAGTATTGCGGGC...CCAGTCCAGCCTCAGATTTGCCTTGAAGCTGAAGATGTTCTCTTCTGCTGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTCGCAGGACTTCCTTCCCAACTCCTCCTGGGCTTGGCTGTGAGCTCACAGACGTTCTGCACTGACTaGAAGTTTTGGGTGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: CFAGLPSQLLLGLAVSSQTFCTD*KFWVFT Trigger: CGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGT...CTGTGAGCTCACAGCCAAGCCCAGGAGGAGTTGGGAAGGAAGTCCTGCGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR GCA 90 bp | CAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGCAAGGCCTCCAGCAGTCCTTTTCCTaGCCAGCGGGTTGGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QWVTEEEANIILGNLQGLQQSFS*PAGWNQ Trigger: CTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTG...GAGGCCTTGCAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CCA 90 bp | GGACTGGGCTACATGAGACCCTGCTTCCAAGAAAAAGTAGGGGTACTCAAGTCCACTGACTGGAAGTTTTaGGTGTTCACGGAGCCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLGYMRPCFQEKVGVLKSTDWKF*VFTEPN Trigger: GTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGT...GGACTTGAGTACCCCTACTTTTTCTTGGAAGCAGGGTCTCATGTAGCCCAGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGAAGTAAAGGAAGCTTGCTGGTTTCCAGTGGGTTACTGAAGAGGAAGCCACCTCGATCTCCTCCTTaGGTCGCATCAGATCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRSKGSLLVSSGLLKRKPPRSPP*VASDPG Trigger: TCCAGGATCTGATGCGACGCAAGGAGGAGATCGAGG...TGGCTTCCTCTTCAGTAACCCACTGGAAACCAGCAAGCTTCCTTTACTTCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR GCA 90 bp | GCCAATATCATACTGGGTAACCTGCAAGGCCTCGTGACCTGTGACCTTTGCAAAACAGTGCCCACGTTCTaGACTGACTGGAAGTTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ANIILGNLQGLVTCDLCKTVPTF*TDWKFW Trigger: CCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGT...TTTGCAAAGGTCACAGGTCACGAGGCCTTGCAGGTTACCCAGTATGATATTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CCA 90 bp | ACACAGCTACAAGACTGGCTTTATCTGACAGTTTCTCTAACCTGTAACAAGGTTTCCTGCCCAGCGGGTTaGAATCAGTCTGAGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLQDWLYLTVSLTCNKVSCPAG*NQSELV Trigger: CACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGA...AACCTTGTTACAGGTTAGAGAAACTGTCAGATAAAGCCAGTCTTGTAGCTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGAAGTAAAGGAAGCTTGCTGGTTTCCAGTGGGTTACTGAAGAGGAAGCCACATTCTGGAGACAGATaGTGTTGTGCCTTGCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CRSKGSLLVSSGLLKRKPHSGDR*CCALLF Trigger: GAACAGCAAGGCACAACATCATCTGTCTCCAGAATG...TGGCTTCCTCTTCAGTAACCCACTGGAAACCAGCAAGCTTCCTTTACTTCTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| 3UTR CAA 72 bp | ATCTGCGGGGTCTTTTACTGTAGAAGTAAAGGAAGCTaGCTGGTTTCCAGTGGGTTACTGAAGAGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICGVFYCRSKGS*LVSSGLLKRKP Trigger: TGGCTTCCTCTTCAGTAACCCACTGGAAACCAGCAAGCTTCCTTTACTTCTACAGTAAAAGACCCCGCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR GCA 90 bp | ACACAGCTACAAGACTGGCTTTATCTGACAGTTTCTCTAACCTGTAACAAGGTTATCAGTCTGAGCTGGTaGTTCTCTCCTCTGCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: TQLQDWLYLTVSLTCNKVISLSW*FSPLRI Trigger: GATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGAT...AACCTTGTTACAGGTTAGAGAAACTGTCAGATAAAGCCAGTCTTGTAGCTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR TCA 90 bp | ACACAGCTACAAGACTGGCTTTATCTGACAGTTTCTCTAACCTGTAACAAGGTTTTCATCAGTGCCTTGTaGTCATTCTGGAGACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQLQDWLYLTVSLTCNKVFISAL*SFWRQM Trigger: CATCTGTCTCCAGAATGATCACAAGGCACTGATGAA...AACCTTGTTACAGGTTAGAGAAACTGTCAGATAAAGCCAGTCTTGTAGCTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS TCA 90 bp | CCGCCTCGATCTCCTCCTTGCGTCGCATCAGATCCTGGATGTCGCTaGCCGCGGCCGCACGGGCCTCGGAGGACTCTGCCCGGTGCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PPRSPPCVASDPGCR*PRPHGPRRTLPGAE Trigger: TTCCGCACCGGGCAGAGTCCTCCGAGGCCCGTGCGGCCGCGGTCAGCGACATCCAGGATCTGATGCGACGCAAGGAGGAGATCGAGGCGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCGGCAGGACGGGGCTGTaGGAGGCCAGCCTGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: ENEETPPGPSTGPAEAASGRTGL*EASLRF Trigger: GAACCGCAGGCTGGCCTCCAACAGCCCCGTCCTGCC...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS CCA 90 bp | GCCTTGATCTCCGCCTCGATCTCCTCCTTGCGTCGCATCAGATCCTaGATGTCGCTGACCGCGGCCGCACGGGCCTCGGAGGACTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ALISASISSLRRIRS*MSLTAAARASEDSA Trigger: GGCAGAGTCCTCCGAGGCCCGTGCGGCCGCGGTCAGCGACATCCAGGATCTGATGCGACGCAAGGAGGAGATCGAGGCGGAGATCAAGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCCGAGCCTGCTTCTCTTaGTCCCGAGCGTGCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENEETPPGPSTGPAEAASRACFS*SRACSW Trigger: CCAGCTGCACGCTCGGGACAAAGAGAAGCAGGCTCG...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS GCA 90 bp | CTGCGGTTCATGGCCTCTTCTCGGGCTTCAGCCATGTCCCGAGCCTaGTTCTCTTTGTCCCGAGCGTGCAGCTGGTGCAGGGCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRFMASSRASAMSRA*FSLSRACSWCRASS Trigger: GGAGGAGGCCCTGCACCAGCTGCACGCTCGGGACAAAGAGAAGCAGGCTCGGGACATGGCTGAAGCCCGAGAAGAGGCCATGAACCGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS GCA 90 bp | CGGGCTTCAGCCATGTCCCGAGCCTGCTTCTCTTTGTCCCGAGCGTaGAGCTGGTGCAGGGCCTCCTCCACTTGCTTCATCAGTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RASAMSRACFSLSRA*SWCRASSTCFISAL Trigger: CAAGGCACTGATGAAGCAAGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGGGACAAAGAGAAGCAGGCTCGGGACATGGCTGAAGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS CCA 90 bp | CCCAGCAGTCCTTTTCCTGCCCAGCGGGTTGGAATCAGTCTGAGCTaGTGCTTCTCTCCTCTGCGGATCACCGTCACATTCAGGGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSSPFPAQRVGISLS*CFSPLRITVTFRGP Trigger: GGGGCCCCTGAATGTGACGGTGATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197809.2 |
||
| CDS TCA 90 bp | TGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGGGTTGGAATCAGTCTaGGCTGGTGCTTCTCTCCTCTGCGGATCACCGTCACATTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CSPAVLFLPSGLESV*AGASLLCGSPSHSG Trigger: CCCTGAATGTGACGGTGATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTGGGCTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS GCA 90 bp | AGCAGTCCTTTTCCTGCCCAGCGGGTTGGAATCAGTCTGAGCTGGTaGTTCTCTCCTCTGCGGATCACCGTCACATTCAGGGGCTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSPFPAQRVGISLSW*FSPLRITVTFRGFP Trigger: GGGGAAGCCCCTGAATGTGACGGTGATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS CCA 90 bp | CCCAGCAGTCCTTTTCCTGCCCAGCGGGTTGGAATCAGTCTGAGCTaGTGCTTCTCTCCTCTGCGGATCACCGTCACATTCAGGGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PSSPFPAQRVGISLS*CFSPLRITVTFRGF Trigger: GAAGCCCCTGAATGTGACGGTGATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS-3UTR CAA 90 bp | GAGAACGAGGAAACGCCTCCAGGCCCAAGCACGGGGCCAGCTGAGGCAGCTTCCTGGAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ENEETPPGPSTGPAEAASWRGIM*QPSSPF Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTCCA...GGAAGCTGCCTCAGCTGGCCCCGTGCTTGGGCCTGGAGGCGTTTCCTCGTTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGTTTCCAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGGGCAGGACGGGGCTGTaGGAGGCCAGCCTGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGFQWVTEEEANIILGNLGRTGL*EASLRF Trigger: GAACCGCAGGCTGGCCTCCAACAGCCCCGTCCTGCC...CAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTGGAAACCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS TCA 90 bp | GGGCTTCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTGCACTaGCTGGAAGTTTTGGGTGTTCACGGAGCCGAACTCCACAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLPLAMLHHSAHVLH*LEVLGVHGAELHNF Trigger: GAAATTGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGAAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
||
| CDS CCA 90 bp | GGCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTGCACTGACTaGAAGTTTTGGGTGTTCACGGAGCCGAACTCCACAATTTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPSLCCTTVPTFCTD*KFWVFTEPNSTISS Trigger: TGACGAAATTGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197809.2 |
||
| CDS TCA 90 bp | TTGCAGCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTGCACTaGCTGGAAGTTTTGGGTGTTCACGGAGCCGAACTCCACAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQPLAMLHHSAHVLH*LEVLGVHGAELHNF Trigger: GAAATTGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198183.2 |
||
| CDS GCA 90 bp | CTGGAGAGGAATAATGTTGCAGCCCCTCGCTATGCTGCACCACAGTaGCCACGTTCTGCACTGACTGGAAGTTTTGGGTGTTCACGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LERNNVAAPRYAAPQ*PRSALTGSFGCSRS Trigger: GCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCTGCAACATTATTCCTCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198183.2 |
||
| CDS CCA 90 bp | AGGAATAATGTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGGGTTaGAATCAGTCTGAGCTGGTGCTTCTCTCCTCTGCGGATCACCGT | + |
|
Preference number: 5 (lower is better) Translates to: RNNVAAQQSFSCPAG*NQSELVLLSSADHR Trigger: ACGGTGATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS CCA 90 bp | AGCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTGCACTGACTaGAAGTTTTGGGTGTTCACGGAGCCGAACTCCACAATTTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: SPSLCCTTVPTFCTD*KFWVFTEPNSTISS Trigger: TGACGAAATTGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198183.2 |
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| CDS TCA 90 bp | TGCAGCTGGTGCAGGGCCTCCTCCACTTGCTTCATCAGTGCCTTGTaGTCATTCTGGAGACAGATGATGTTGTGCCTTGCTGTTCGGACC | + |
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Preference number: 5 (lower is better) Translates to: CSWCRASSTCFISAL*SFWRQMMLCLAVRT Trigger: GGTCCGAACAGCAAGGCACAACATCATCTGTCTCCAGAATGATCACAAGGCACTGATGAAGCAAGTGGAGGAGGCCCTGCACCAGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS CCA 90 bp | TTCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTGCACTGACTaGAAGTTTTGGGTGTTCACGGAGCCGAACTCCACAATTTCGTCA | + |
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Preference number: 5 (lower is better) Translates to: FPSLCCTTVPTFCTD*KFWVFTEPNSTISS Trigger: TGACGAAATTGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS-3UTR CAA 90 bp | GAGACAGCAGAAGAGAACATCTTCAGCTTCAAGGCAAATCTGAGGCTGGACTGGGCCTCGATCTCCTCCTaGCGTCGCATCAGATCCTGG | + |
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Preference number: 5 (lower is better) Translates to: ETAEENIFSFKANLRLDWASISS*RRIRSW Trigger: CCAGGATCTGATGCGACGCAAGGAGGAGATCGAGGC...CCAGTCCAGCCTCAGATTTGCCTTGAAGCTGAAGATGTTCTCTTCTGCTGTCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS CCA 90 bp | CTATGCTGCACCACAGTGCCCACGTTCTGCACTGACTGGAAGTTTTaGGTGTTCACGGAGCCGAACTCCACAATTTCGTCATCCACTTGC | + |
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Preference number: 5 (lower is better) Translates to: LCCTTVPTFCTDWKF*VFTEPNSTISSSTC Trigger: GCAAGTGGATGACGAAATTGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 ENSMUST00000198183.2 |
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| CDS TCA 90 bp | CCTCCACTTGCTTCATCAGTGCCTTGTGATCATTCTGGAGACAGATaGTGTTGTGCCTTGCTGTTCGGACCTGGTACAAGTCCACATCCG | + |
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Preference number: 5 (lower is better) Translates to: PPLASSVPCDHSGDR*CCALLFGPGTSPHP Trigger: CGGATGTGGACTTGTACCAGGTCCGAACAGCAAGGCACAACATCATCTGTCTCCAGAATGATCACAAGGCACTGATGAAGCAAGTGGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS-3UTR CAA 90 bp | GCTGGTTTCCAGTGGGTTACTGAAGAGGAAGCCAATATCATACTGGGTAACCTGTGGAGAGGAATAATGTaGCAGCCCAGCAGTCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: AGFQWVTEEEANIILGNLWRGIM*QPSSPF Trigger: AAAAGGACTGCTGGGCTGCAACATTATTCCTCTCCA...CAGGTTACCCAGTATGATATTGGCTTCCTCTTCAGTAACCCACTGGAAACCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS-3UTR CAA 90 bp | ACACAGCTACAAGACTGGCTTTATCTGACAGTTTCTCTAACCTGTAACAAGGTTCATGCCAATTCCTTTTaGGCTCTCCAGGACGTCGTA | + |
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Preference number: 5 (lower is better) Translates to: TQLQDWLYLTVSLTCNKVHANSF*ALQDVV Trigger: TACGACGTCCTGGAGAGCCAAAAAGGAATTGGCATG...AACCTTGTTACAGGTTAGAGAAACTGTCAGATAAAGCCAGTCTTGTAGCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS TCA 72 bp | TCTCCTCCTTGCGTCGCATCAGATCCTGGATGTCGCTaGCCGCGGCCGCACGGGCCTCGGAGGACTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: SPPCVASDPGCR*PRPHGPRRTLP Trigger: GGGCAGAGTCCTCCGAGGCCCGTGCGGCCGCGGTCAGCGACATCCAGGATCTGATGCGACGCAAGGAGGAGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS CCA 72 bp | TCCGCCTCGATCTCCTCCTTGCGTCGCATCAGATCCTaGATGTCGCTGACCGCGGCCGCACGGGCCTCGGAG | + |
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Preference number: 6 (lower is better) Translates to: SASISSLRRIRS*MSLTAAARASE Trigger: CTCCGAGGCCCGTGCGGCCGCGGTCAGCGACATCCAGGATCTGATGCGACGCAAGGAGGAGATCGAGGCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS CAA 72 bp | TCTCGGGCTTCAGCCATGTCCCGAGCCTGCTTCTCTTaGTCCCGAGCGTGCAGCTGGTGCAGGGCCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SRASAMSRACFS*SRACSWCRASS Trigger: GGAGGAGGCCCTGCACCAGCTGCACGCTCGGGACAAAGAGAAGCAGGCTCGGGACATGGCTGAAGCCCGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS CAA 90 bp | ATGGCCTCTTCTCGGGCTTCAGCCATGTCCCGAGCCTGCTTCTCTTaGTCCCGAGCGTGCAGCTGGTGCAGGGCCTCCTCCACTTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: MASSRASAMSRACFS*SRACSWCRASSTCF Trigger: GAAGCAAGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGGGACAAAGAGAAGCAGGCTCGGGACATGGCTGAAGCCCGAGAAGAGGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS GCA 72 bp | ATGGCCTCTTCTCGGGCTTCAGCCATGTCCCGAGCCTaGTTCTCTTTGTCCCGAGCGTGCAGCTGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: MASSRASAMSRA*FSLSRACSWCR Trigger: CCTGCACCAGCTGCACGCTCGGGACAAAGAGAAGCAGGCTCGGGACATGGCTGAAGCCCGAGAAGAGGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS GCA 72 bp | CTGCGGATCACCGTCACATTCAGGGGCCCCTCGCTATaGTGCACCACAGTGCCCACGTTCTGCACTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: LRITVTFRGPSL*CTTVPTFCTDW Trigger: CCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCCCCTGAATGTGACGGTGATCCGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197809.2 |
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| CDS CCA 72 bp | TCCCGAGCCTGCTTCTCTTTGTCCCGAGCGTGCAGCTaGTGCAGGGCCTCCTCCACTTGCTTCATCAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SRACFSLSRACS*CRASSTCFISA Trigger: GGCACTGATGAAGCAAGTGGAGGAGGCCCTGCACCAGCTGCACGCTCGGGACAAAGAGAAGCAGGCTCGGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS GCA 72 bp | CGGATCACCGTCACATTCAGGGGCTTCCCCTCGCTATaGTGCACCACAGTGCCCACGTTCTGCACTGACTGG | + |
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Preference number: 6 (lower is better) Translates to: RITVTFRGFPSL*CTTVPTFCTDW Trigger: CCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGAAGCCCCTGAATGTGACGGTGATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS GCA 72 bp | GGCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTaGACTGACTGGAAGTTTTGGGTGTTCACGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: GPSLCCTTVPTF*TDWKFWVFTEP Trigger: CGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197809.2 |
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| CDS GCA 72 bp | CGGATCACCGTCACATTCAGGGGCCCCTCGCTATGCTaGACCACAGTGCCCACGTTCTGCACTGACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RITVTFRGPSLC*TTVPTFCTDWK Trigger: CTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCCCCTGAATGTGACGGTGATCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197809.2 |
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| CDS GCA 72 bp | AGCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTaGACTGACTGGAAGTTTTGGGTGTTCACGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: SPSLCCTTVPTF*TDWKFWVFTEP Trigger: CGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198183.2 |
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| CDS CCA 72 bp | GTTGCAGCCCAGCAGTCCTTTTCCTGCCCAGCGGGTTaGAATCAGTCTGAGCTGGTGCTTCTCTCCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: VAAQQSFSCPAG*NQSELVLLSSA Trigger: CGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTGGGCTGCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS TCA 72 bp | GCAGTCCTTTTCCTGCCCAGCGGGTTGGAATCAGTCTaGGCTGGTGCTTCTCTCCTCTGCGGATCACCGTCA | + |
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Preference number: 6 (lower is better) Translates to: AVLFLPSGLESV*AGASLLCGSPS Trigger: TGACGGTGATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS GCA 72 bp | TTCCCCTCGCTATGCTGCACCACAGTGCCCACGTTCTaGACTGACTGGAAGTTTTGGGTGTTCACGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: FPSLCCTTVPTF*TDWKFWVFTEP Trigger: CGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS GCA 72 bp | ATCACCGTCACATTCAGGGGCTTCCCCTCGCTATGCTaGACCACAGTGCCCACGTTCTGCACTGACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: ITVTFRGFPSLC*TTVPTFCTDWK Trigger: CTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGAAGCCCCTGAATGTGACGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS TCA 72 bp | CTCGCTATGCTGCACCACAGTGCCCACGTTCTGCACTaGCTGGAAGTTTTGGGTGTTCACGGAGCCGAACTC | + |
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Preference number: 6 (lower is better) Translates to: LAMLHHSAHVLH*LEVLGVHGAEL Trigger: GAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 ENSMUST00000198183.2 |
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| CDS GCA 72 bp | TTTCCTGCCCAGCGGGTTGGAATCAGTCTGAGCTGGTaGTTCTCTCCTCTGCGGATCACCGTCACATTCAGG | + |
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Preference number: 6 (lower is better) Translates to: FPAQRVGISLSW*FSPLRITVTFR Trigger: CCTGAATGTGACGGTGATCCGCAGAGGAGAGAAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS CCA 72 bp | CTATGCTGCACCACAGTGCCCACGTTCTGCACTGACTaGAAGTTTTGGGTGTTCACGGAGCCGAACTCCACA | + |
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Preference number: 6 (lower is better) Translates to: LCCTTVPTFCTD*KFWVFTEPNST Trigger: TGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 ENSMUST00000198183.2 |
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| CDS GCA 72 bp | GAGAGGAATAATGTTGCAGCCCAGCAGTCCTTTTCCTaGCCAGCGGGTTGGAATCAGTCTGAGCTGGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: ERNNVAAQQSFS*PAGWNQSELVL Trigger: AAGCACCAGCTCAGACTGATTCCAACCCGCTGGGCAGGAAAAGGACTGCTGGGCTGCAACATTATTCCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS CCA 72 bp | AATTTCGTCATCCACTTGCAGGCCCGCAATACTGGCTaGGGAACCGGGGCTGATACTGTTCACTCTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: NFVIHLQARNTG*GTGADTVHSGK Trigger: TTTGCCAGAGTGAACAGTATCAGCCCCGGTTCCCCAGCCAGTATTGCGGGCCTGCAAGTGGATGACGAAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 |
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| CDS GCA 72 bp | AATAATGTTGCAGCCCCTCGCTATGCTGCACCACAGTaGCCACGTTCTGCACTGACTGGAAGTTTTGGGTGT | + |
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Preference number: 6 (lower is better) Translates to: NNVAAPRYAAPQ*PRSALTGSFGC Trigger: ACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGTGCAGCATAGCGAGGGGCTGCAACATTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000198183.2 |
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| CDS CCA 72 bp | ACCACAGTGCCCACGTTCTGCACTGACTGGAAGTTTTaGGTGTTCACGGAGCCGAACTCCACAATTTCGTCA | + |
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Preference number: 6 (lower is better) Translates to: TTVPTFCTDWKF*VFTEPNSTISS Trigger: TGACGAAATTGTGGAGTTCGGCTCCGTGAACACCCAAAACTTCCAGTCAGTGCAGAACGTGGGCACTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100729.9 ENSMUST00000197809.2 ENSMUST00000198183.2 |
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| CDS CAA 90 bp | ATAGCCCTCACAGTCCACCAGCGGTTCGTTCATGCCAATTCCTTTTaGGCTCTCCAGGACGTCGTAATTAGCCTTGATCTCCGCCTCGAT | + |
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Preference number: 6 (lower is better) Translates to: IALTVHQRFVHANSF*ALQDVVISLDLRLD Trigger: ATCGAGGCGGAGATCAAGGCTAATTACGACGTCCTGGAGAGCCAAAAAGGAATTGGCATGAACGAACCGCTGGTGGACTGTGAGGGCTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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| CDS CAA 72 bp | ACAGTCCACCAGCGGTTCGTTCATGCCAATTCCTTTTaGGCTCTCCAGGACGTCGTAATTAGCCTTGATCTC | + |
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Preference number: 6 (lower is better) Translates to: TVHQRFVHANSF*ALQDVVISLDL Trigger: GAGATCAAGGCTAATTACGACGTCCTGGAGAGCCAAAAAGGAATTGGCATGAACGAACCGCTGGTGGACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100729.9 |
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