Pregenerated sensors for PSMD6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021737Ensembl transcript IDs: ENSMUST00000022256.5, ENSMUST00000224955.2
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGACCGCAGCTGCGCGATaGGCAGGTCGGGGTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKTAAAR*AGRGSW Trigger: CCAAGAACCCCGACCTGCGCATCGCGCAGCTGCGGT...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGAGCAGAAACCGCAGCTaGGCGATGCGCAGGTCGGGG | + |
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Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQSRNRS*AMRRSG Trigger: CCCCGACCTGCGCATCGCGCAGCTGCGGTTTCTGCT...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR TCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGACAATATCCAGGCGGTaGCCCAGGGCCACAGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKTISRR*PRATVL Trigger: TAAGACTGTGGCCCTGGGTCACCGCCTGGATATTGT...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCGCAGGTCGGGGTTCTTaGGCAGTCCCTCTTCTTCTA | + |
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Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASAGRGS*AVPLLL Trigger: TAGAAGAAGAGGGACTGCCCAAGAACCCCGACCTGC...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCACAGCTCCTGGTCAATaGAGTCCACACCCACACCAA | + |
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Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASTAPGQ*SPHPHQ Trigger: TTGGTGTGGGTGTGGACTTCATTGACCAGGAGCTGT...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGGTCGAGAAAGAGCTCTaGTGCCTGTTTGAAGTCACG | + |
|
Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKVEKEL*CLFEVT Trigger: CGTGACTTCAAACAGGCAGCAGAGCTCTTTCTCGAC...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAGATCCACGTCCATCTaGCAGTCGAGGGATTTACAC | + |
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Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASRSTSI*QSRDLH Trigger: GTGTAAATCCCTCGACTGGCAGATGGACGTGGATCT...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCCAGATACTGCCGAACTaGTGGAAGACTGTGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASQILPN*WKTVQH Trigger: GTGTTGCACAGTCTTCCAGCAGTTCGGCAGTATCTG...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGTATGATTCCAGCAGCTaGCTGTACGCATGGATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKYDSSS*LYAWIL Trigger: GAGAATCCATGCGTACAGCCAGCTGCTGGAATCATA...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCATACTGCCGAACTGCTaGAAGACTGTGCAACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASILPNC*KTVQHF Trigger: GAAGTGTTGCACAGTCTTCCAGCAGTTCGGCAGTAT...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR TCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGACTCTGGATAATTTCTaGACCCTGTTTAGCAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKTLDNF*TLFSSK Trigger: CTTGCTGCTAAACAGGGTTCAGAAATTATCCAGAGT...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCCTGACAGAGGTACTCTaGTTTTGCCATCATTGCATC | + |
|
Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASLTEVL*FCHHCI Trigger: GATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAG...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCGATACTGCCAGTTCTTaGTATCAGGTCTGTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASDTASS*YQVCWS Trigger: AGACCAACAGACCTGATAGCAAGAACTGGCAGTATC...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGAGCTGGCTGTACGCATaGATTCTCATTTCTCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKSWLYA*ILISLT Trigger: TGTAAGAGAAATGAGAATCCATGCGTACAGCCAGCT...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGTGCTATCAGGTCTGTTaGTCTCCACGATTTCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKCYQVC*SPRFHL Trigger: TAAATGAAATCGTGGAGACCAACAGACCTGATAGCA...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR TCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGTCCTTGTCACCTATCTaGCAGAGGTACTCTGCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQSLSPI*QRYSAF Trigger: AAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGA...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR TCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCTTCTTGATGGTTTCTTaGTACTGCCAGTTCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASFLMVS*YCQFLL Trigger: TAGCAAGAACTGGCAGTATCAAGAAACCATCAAGAA...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR TCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGGCAAGTCTCCTTTCTTaGTGGTTTCTTGATACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQASLLS*WFLDTA Trigger: GGCAGTATCAAGAAACCATCAAGAAAGGAGACTTGC...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCTCTTATCGTATGTCTTaGGAAAAGCTGTCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASSYRMS*EKLSKL Trigger: GAGCTTTGACAGCTTTTCGCAAGACATACGATAAGA...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGACTGCTGGAAGACTGTaGAACACTTCAAGGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQTAGRL*NTSRIS Trigger: AGAGATCCTTGAAGTGTTGCACAGTCTTCCAGCAGT...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGAGAGAAAACAGATACTaGCGAACTGCTGGAAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQRENRY*RTAGRL Trigger: CAGTCTTCCAGCAGTTCGGCAGTATCTGTTTTCTCT...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGCCTCTATCAGGCTTTTaGCCTTTTCTGTGTTTCGAG | + |
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Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQPLSGF*PFLCFE Trigger: CTCGAAACACAGAAAAGGCCAAAAGCCTGATAGAGG...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CCA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGTTATCAATTTTGCAGTaGAGTCTTCCAGCAGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: YLMLLKWAHSEEVRKASKLSILQ*SLPAAI Trigger: TATTGCTGCTGGAAGACTCCACTGCAAAATTGATAA...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCTGCTTTTGCCATCATTaGATCTCGAATTTCACTTTC | + |
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Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASCFCHH*ISNFTF Trigger: GAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCA...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGGAGGTACTCTGCTTTTaGCATCATTGCATCTCGAAT | + |
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Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQEVLCF*HHCISN Trigger: ATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTC...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGCACTTCAAGGATCTCTaGCCCTTTAATGACCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQHFKDL*PFNDLF Trigger: GAAAAGGTCATTAAAGGGGCAGAGATCCTTGAAGTG...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR GCA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCTTACTTTATCAATTTTaGAGTGGAGTCTTCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: IYLMLLKWAHSEEVRKASLLYQF*SGVFQQ Trigger: CTGCTGGAAGACTCCACTGCAAAATTGATAAAGTAA...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 90 bp | CGGACGGCCGCCATCAACTCCTCGCGCACCGCCGCGTCCCCGCGGTaGTCCGGCAGGCTAAGCAGAAACCGCAGCTGCGCGATGCGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RTAAINSSRTAASPR*SGRLSRNRSCAMRR Trigger: CCTGCGCATCGCGCAGCTGCGGTTTCTGCTTAGCCTGCCGGAGCACCGCGGGGACGCGGCGGTGCGCGAGGAGTTGATGGCGGCCGTCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 90 bp | GCCGCGTCCCCGCGGTGCTCCGGCAGGCTAAGCAGAAACCGCAGCTaGGCGATGCGCAGGTCGGGGTTCTTGGGCAGTCCCTCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: AASPRCSGRLSRNRS*AMRRSGFLGSPSSS Trigger: AGAAGAAGAGGGACTGCCCAAGAACCCCGACCTGCGCATCGCGCAGCTGCGGTTTCTGCTTAGCCTGCCGGAGCACCGCGGGGACGCGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS CCA 90 bp | TCTGCTGCCTGTTTGAAGTCACGGATAGCCACACAATATAAGCCCTaGTACACTTTCAGCCTGTTTCGCCTGTCCCAGTCTCCGCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SAACLKSRIATQYKP*YTFSLFRLSQSPPS Trigger: GGAAGGCGGAGACTGGGACAGGCGAAACAGGCTGAAAGTGTACCAGGGCTTATATTGTGTGGCTATCCGTGACTTCAAACAGGCAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS GCA 90 bp | CAATATCCAGGCGGTGACCCAGGGCCACAGTCTTATCGTATGTCTTaGGAAAAGCTGTCAAAGCTCCTTCCTTGTCACCTATCTGACAGA | + |
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Preference number: 5 (lower is better) Translates to: QYPGGDPGPQSYRMS*EKLSKLLPCHLSDR Trigger: TCTGTCAGATAGGTGACAAGGAAGGAGCTTTGACAGCTTTTCGCAAGACATACGATAAGACTGTGGCCCTGGGTCACCGCCTGGATATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 90 bp | GTCCCAGTCTCCGCCTTCCTTGTCACCTATCTGACAGAGGTACTCTaGTTTTGCCATCATTGCATCTCGAATTTCACTTTCTCCCAGATT | + |
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Preference number: 5 (lower is better) Translates to: VPVSAFLVTYLTEVL*FCHHCISNFTFSQI Trigger: AATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGCGGAGACTGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224955.2 |
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| CDS GCA 90 bp | GTCTCCGCCTTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTTaGCATCATTGCATCTCGAATTTCACTTTCTCCCAGATTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VSAFLVTYLTEVLCF*HHCISNFTFSQILL Trigger: GAGAAGAATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGCGGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224955.2 |
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| CDS-3UTR CAA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGCGCAGGTCGGGGTTCTaGGGCAGTCCCTCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQRRSGF*GSPSSS Trigger: AGAAGAAGAGGGACTGCCCAAGAACCCCGACCTGCG...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 90 bp | TTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTTGCCATCATTaGATCTCGAATTTCACTTTCTCCCAGATTCTTCTCTGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: FLVTYLTEVLCFCHH*ISNFTFSQILLCIL Trigger: GAGGATGCAGAGAAGAATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS GCA 90 bp | CAAAGCTCCTTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTTaGCATCATTGCATCTCGAATTTCACTTTCTCCCAGATTCTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QSSFLVTYLTEVLCF*HHCISNFTFSQILL Trigger: GAGAAGAATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGAGCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 90 bp | AGCTGTCAAAGCTCCTTCCTTGTCACCTATCTGACAGAGGTACTCTaGTTTTGCCATCATTGCATCTCGAATTTCACTTTCTCCCAGATT | + |
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Preference number: 5 (lower is better) Translates to: SCQSSFLVTYLTEVL*FCHHCISNFTFSQI Trigger: AATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGAGCTTTGACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CAA 90 bp | ATTTATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAGAGGTACTCTGCTTTaGCCATCATTGCATCTCGAA | + |
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Preference number: 5 (lower is better) Translates to: IYLMLLKWAHSEEVRKASRGTLL*PSLHLE Trigger: TTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCT...GGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CAA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGCTGCTTTTGCCATCATaGCATCTCGAATTTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: YLMLLKWAHSEEVRKASKLLLPS*HLEFHF Trigger: AAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAG...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CAA 90 bp | AACAGAAAGAAACAAATGACATATTTATTTGATGCTGTTGAAGTGGGCACACAGTCCTCTATCAGGCTTTaGGCCTTTTCTGTGTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: NRKKQMTYLFDAVEVGTQSSIRL*AFSVFR Trigger: TCGAAACACAGAAAAGGCCAAAAGCCTGATAGAGGA...CTGTGTGCCCACTTCAACAGCATCAAATAAATATGTCATTTGTTTCTTTCTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS-3UTR CAA 90 bp | TATTTGATGCTGTTGAAGTGGGCACACAGTGAAGAAGTTAGAAAAGCTTCCAAGTTTACTTTATCAATTTaGCAGTGGAGTCTTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: YLMLLKWAHSEEVRKASKFTLSI*QWSLPA Trigger: TGCTGGAAGACTCCACTGCAAAATTGATAAAGTAAA...CTTGGAAGCTTTTCTAACTTCTTCACTGTGTGCCCACTTCAACAGCATCAAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 72 bp | GCCATCAACTCCTCGCGCACCGCCGCGTCCCCGCGGTaGTCCGGCAGGCTAAGCAGAAACCGCAGCTGCGCG | + |
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Preference number: 6 (lower is better) Translates to: AINSSRTAASPR*SGRLSRNRSCA Trigger: CGCGCAGCTGCGGTTTCTGCTTAGCCTGCCGGAGCACCGCGGGGACGCGGCGGTGCGCGAGGAGTTGATGGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 72 bp | CCGCGGTGCTCCGGCAGGCTAAGCAGAAACCGCAGCTaGGCGATGCGCAGGTCGGGGTTCTTGGGCAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: PRCSGRLSRNRS*AMRRSGFLGSP Trigger: GGGACTGCCCAAGAACCCCGACCTGCGCATCGCGCAGCTGCGGTTTCTGCTTAGCCTGCCGGAGCACCGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS CCA 72 bp | GAAACCGCAGCTGCGCGATGCGCAGGTCGGGGTTCTTaGGCAGTCCCTCTTCTTCTAGGTTTTCTAGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: ETAAARCAGRGS*AVPLLLGFLAA Trigger: TGCCGCTAGAAAACCTAGAAGAAGAGGGACTGCCCAAGAACCCCGACCTGCGCATCGCGCAGCTGCGGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS CAA 72 bp | AGAAACCGCAGCTGCGCGATGCGCAGGTCGGGGTTCTaGGGCAGTCCCTCTTCTTCTAGGTTTTCTAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: RNRSCAMRRSGF*GSPSSSRFSSG Trigger: GCCGCTAGAAAACCTAGAAGAAGAGGGACTGCCCAAGAACCCCGACCTGCGCATCGCGCAGCTGCGGTTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 72 bp | GGCGGTGACCCAGGGCCACAGTCTTATCGTATGTCTTaGGAAAAGCTGTCAAAGCTCCTTCCTTGTCACCTA | + |
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Preference number: 6 (lower is better) Translates to: GGDPGPQSYRMS*EKLSKLLPCHL Trigger: TAGGTGACAAGGAAGGAGCTTTGACAGCTTTTCGCAAGACATACGATAAGACTGTGGCCCTGGGTCACCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS CCA 72 bp | TGTTTGAAGTCACGGATAGCCACACAATATAAGCCCTaGTACACTTTCAGCCTGTTTCGCCTGTCCCAGTCT | + |
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Preference number: 6 (lower is better) Translates to: CLKSRIATQYKP*YTFSLFRLSQS Trigger: AGACTGGGACAGGCGAAACAGGCTGAAAGTGTACCAGGGCTTATATTGTGTGGCTATCCGTGACTTCAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS CCA 72 bp | GCATTCATAGAGAGAAAACAGATACTGCCGAACTGCTaGAAGACTGTGCAACACTTCAAGGATCTCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: AFIERKQILPNC*KTVQHFKDLCP Trigger: GGGGCAGAGATCCTTGAAGTGTTGCACAGTCTTCCAGCAGTTCGGCAGTATCTGTTTTCTCTCTATGAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS CAA 72 bp | GTAGAAACAGTGTCGAGAAAGAGCTCTGCTGCCTGTTaGAAGTCACGGATAGCCACACAATATAAGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VETVSRKSSAAC*KSRIATQYKPW Trigger: CCAGGGCTTATATTGTGTGGCTATCCGTGACTTCAAACAGGCAGCAGAGCTCTTTCTCGACACTGTTTCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS GCA 72 bp | AGAGAAAACAGATACTGCCGAACTGCTGGAAGACTGTaGAACACTTCAAGGATCTCTGCCCCTTTAATGACC | + |
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Preference number: 6 (lower is better) Translates to: RENRYCRTAGRL*NTSRISAPLMT Trigger: GGTCATTAAAGGGGCAGAGATCCTTGAAGTGTTGCACAGTCTTCCAGCAGTTCGGCAGTATCTGTTTTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS GCA 72 bp | ACGGCATTCATAGAGAGAAAACAGATACTGCCGAACTaGTGGAAGACTGTGCAACACTTCAAGGATCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TAFIERKQILPN*WKTVQHFKDLC Trigger: GCAGAGATCCTTGAAGTGTTGCACAGTCTTCCAGCAGTTCGGCAGTATCTGTTTTCTCTCTATGAATGCCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS CAA 90 bp | GATGTAAACGTAGAAACAGTGTCGAGAAAGAGCTCTGCTGCCTGTTaGAAGTCACGGATAGCCACACAATATAAGCCCTGGTACACTTTC | + |
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Preference number: 6 (lower is better) Translates to: DVNVETVSRKSSAAC*KSRIATQYKPWYTF Trigger: GAAAGTGTACCAGGGCTTATATTGTGTGGCTATCCGTGACTTCAAACAGGCAGCAGAGCTCTTTCTCGACACTGTTTCTACGTTTACATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS CAA 90 bp | AGTCTCCGCCTTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTaGCCATCATTGCATCTCGAATTTCACTTTCTCCCAGATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SLRLPCHLSDRGTLL*PSLHLEFHFLPDSS Trigger: AGAAGAATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGCGGAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224955.2 |
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| CDS GCA 72 bp | CGATGTAAACGTAGAAACAGTGTCGAGAAAGAGCTCTaGTGCCTGTTTGAAGTCACGGATAGCCACACAATA | + |
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Preference number: 6 (lower is better) Translates to: RCKRRNSVEKEL*CLFEVTDSHTI Trigger: TATTGTGTGGCTATCCGTGACTTCAAACAGGCAGCAGAGCTCTTTCTCGACACTGTTTCTACGTTTACATCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS GCA 72 bp | TCCGCCTTCCTTGTCACCTATCTGACAGAGGTACTCTaGTTTTGCCATCATTGCATCTCGAATTTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SAFLVTYLTEVL*FCHHCISNFTF Trigger: GAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGCGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224955.2 |
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| CDS CAA 90 bp | CTTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTTGCCATCATaGCATCTCGAATTTCACTTTCTCCCAGATTCTTCTCTGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: LPCHLSDRGTLLLPS*HLEFHFLPDSSLHP Trigger: AGGATGCAGAGAAGAATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS CAA 90 bp | CTATCAGGTCTGTTGGTCTCCACGATTTCATTTACTTTATCAATTTaGCAGTGGAGTCTTCCAGCAGCAATAAACCTGGACAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSGLLVSTISFTLSI*QWSLPAAINLDSSW Trigger: CCAGGAGCTGTCCAGGTTTATTGCTGCTGGAAGACTCCACTGCAAAATTGATAAAGTAAATGAAATCGTGGAGACCAACAGACCTGATAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS TCA 72 bp | CTGTTTAGCAGCAAGTCTCCTTTCTTGATGGTTTCTTaGTACTGCCAGTTCTTGCTATCAGGTCTGTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: LFSSKSPFLMVS*YCQFLLSGLLV Trigger: GACCAACAGACCTGATAGCAAGAACTGGCAGTATCAAGAAACCATCAAGAAAGGAGACTTGCTGCTAAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS GCA 72 bp | TTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTTaGCATCATTGCATCTCGAATTTCACTTTCTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: FLVTYLTEVLCF*HHCISNFTFSQ Trigger: CTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS GCA 72 bp | AGCTCCTTCCTTGTCACCTATCTGACAGAGGTACTCTaGTTTTGCCATCATTGCATCTCGAATTTCACTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSFLVTYLTEVL*FCHHCISNFTF Trigger: GAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS CAA 72 bp | CTTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTaGCCATCATTGCATCTCGAATTTCACTTTCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LPCHLSDRGTLL*PSLHLEFHFLP Trigger: TGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS CAA 90 bp | TCAAAGCTCCTTCCTTGTCACCTATCTGACAGAGGTACTCTGCTTTaGCCATCATTGCATCTCGAATTTCACTTTCTCCCAGATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SKLLPCHLSDRGTLL*PSLHLEFHFLPDSS Trigger: AGAAGAATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTGACAAGGAAGGAGCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS CAA 72 bp | CACCTATCTGACAGAGGTACTCTGCTTTTGCCATCATaGCATCTCGAATTTCACTTTCTCCCAGATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: HLSDRGTLLLPS*HLEFHFLPDSS Trigger: AGAAGAATCTGGGAGAAAGTGAAATTCGAGATGCAATGATGGCAAAAGCAGAGTACCTCTGTCAGATAGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022256.5 ENSMUST00000224955.2 |
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| CDS TCA 72 bp | ATTTCTGAACCCTGTTTAGCAGCAAGTCTCCTTTCTTaGTGGTTTCTTGATACTGCCAGTTCTTGCTATCAG | + |
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Preference number: 6 (lower is better) Translates to: ISEPCLAASLLS*WFLDTASSCYQ Trigger: CTGATAGCAAGAACTGGCAGTATCAAGAAACCATCAAGAAAGGAGACTTGCTGCTAAACAGGGTTCAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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| CDS CAA 72 bp | CTGTTGGTCTCCACGATTTCATTTACTTTATCAATTTaGCAGTGGAGTCTTCCAGCAGCAATAAACCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LLVSTISFTLSI*QWSLPAAINLD Trigger: GTCCAGGTTTATTGCTGCTGGAAGACTCCACTGCAAAATTGATAAAGTAAATGAAATCGTGGAGACCAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022256.5 |
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