Pregenerated sensors for PSMD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026869Ensembl transcript IDs: ENSMUST00000028225.12, ENSMUST00000135575.2
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACACTGCTGATGGTGAGGCTGTGCCTGGGAAGACAGACGTCCTGTaGTGTGGAGCACGGATGGAATCGTGTGCCTTGGGAAATTCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: NTADGEAVPGKTDVL*CGARMESCALGNSA Trigger: AGCAGAATTTCCCAAGGCACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTCACCATCAGCAGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| 3UTR CCA 90 bp | TTCTACATCTTGATCAGAAGGCAGCCAGGAGACCCTGTTCCACCCTaGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTG | + |
|
Preference number: 1 (lower is better) Translates to: FYILIRRQPGDPVPP*AEFEHRRPQSSAPV Trigger: CACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTGGCTGCCTTCTGATCAAGATGTAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR TCA 90 bp | GGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTaGCACTTCCTCCTGATAGTGCCATTCCCTAGGGGCCAAATATTC | + |
|
Preference number: 1 (lower is better) Translates to: GRSLSIGDLKAQHPW*HFLLIVPFPRGQIF Trigger: GAATATTTGGCCCCTAGGGAATGGCACTATCAGGAGGAAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR GCA 90 bp | CAAGCCCAAGAGGGCTCCTTAGCACTCTTTCCTAGACCTGTGTCCTaGAAGCCCAAAGAGGATCCCTCTATTACCTGGAGCCCCTTCCAT | + |
|
Preference number: 1 (lower is better) Translates to: QAQEGSLALFPRPVS*KPKEDPSITWSPFH Trigger: ATGGAAGGGGCTCCAGGTAATAGAGGGATCCTCTTTGGGCTTGCAGGACACAGGTCTAGGAAAGAGTGCTAAGGAGCCCTCTTGGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR TCA 90 bp | TATGCAGGAAGCCATTTTGCTGGAGGAGCTGAGAATTCTACATCTTaGTCAGAAGGCAGCCAGGAGACCCTGTTCCACCCTGGGCGGAGT | + |
|
Preference number: 1 (lower is better) Translates to: YAGSHFAGGAENSTS*SEGSQETLFHPGRS Trigger: ACTCCGCCCAGGGTGGAACAGGGTCTCCTGGCTGCCTTCTGATCAAGATGTAGAATTCTCAGCTCCTCCAGCAAAATGGCTTCCTGCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 90 bp | GGATACAAGAGAAGCCCTGTCTCAGGAAACCAAGTGCTGGAGCTGTaGCTCAATGATCAACAGCACTGTGGACCCAAAGGAACCGGGTTC | + |
|
Preference number: 1 (lower is better) Translates to: GYKRSPVSGNQVLEL*LNDQQHCGPKGTGF Trigger: GAACCCGGTTCCTTTGGGTCCACAGTGCTGTTGATCATTGAGCCACAGCTCCAGCACTTGGTTTCCTGAGACAGGGCTTCTCTTGTATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 90 bp | ATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGACTTTaGCAGCCAGAGGACTCGGGGAAACACGAGCACTCTCAGGCTCCT | + |
|
Preference number: 1 (lower is better) Translates to: METLRKQTSTLQQRL*QPEDSGKHEHSQAP Trigger: AGGAGCCTGAGAGTGCTCGTGTTTCCCCGAGTCCTCTGGCTGCCAAAGTCTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR GCA 90 bp | GGTTCAAATCCCAGCTACTGCTTGATGTCTCACAGCCATCTGAACTaGCATTGGGCTGGTGAGATGGCTCAGCAGGTAAGAGTACTGACA | + |
|
Preference number: 1 (lower is better) Translates to: GSNPSYCLMSHSHLN*HWAGEMAQQVRVLT Trigger: TGTCAGTACTCTTACCTGCTGAGCCATCTCACCAGCCCAATGGCAGTTCAGATGGCTGTGAGACATCAAGCAGTAGCTGGGATTTGAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 90 bp | GAACTCAGGGATACAAGAGAAGCCCTGTCTCAGGAAACCAAGTGCTaGAGCTGTGGCTCAATGATCAACAGCACTGTGGACCCAAAGGAA | + |
|
Preference number: 1 (lower is better) Translates to: ELRDTREALSQETKC*SCGSMINSTVDPKE Trigger: TTCCTTTGGGTCCACAGTGCTGTTGATCATTGAGCCACAGCTCCAGCACTTGGTTTCCTGAGACAGGGCTTCTCTTGTATCCCTGAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 90 bp | AATCCCAGCTACTGCTTGATGTCTCACAGCCATCTGAACTGCCATTaGGCTGGTGAGATGGCTCAGCAGGTAAGAGTACTGACAGCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: NPSYCLMSHSHLNCH*AGEMAQQVRVLTAF Trigger: AAAAGCTGTCAGTACTCTTACCTGCTGAGCCATCTCACCAGCCCAATGGCAGTTCAGATGGCTGTGAGACATCAAGCAGTAGCTGGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR TCA 90 bp | ACAGTGACATGGCATGTTAGTTGGTACACGCTGTCCCTTCTCTTCTaGCTTTGGACATCAGGAGCCAGAGAGTCTGACTACATCAAGACT | + |
|
Preference number: 1 (lower is better) Translates to: TVTWHVSWYTLSLLF*LWTSGARESDYIKT Trigger: AGTCTTGATGTAGTCAGACTCTCTGGCTCCTGATGTCCAAAGTCAGAAGAGAAGGGACAGCGTGTACCAACTAACATGCCATGTCACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CCA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTTGTGACTTGGGATGGTaGCTGGCAGCAGTGGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLCDLGW*LAAVGG Trigger: TCCTCCCACTGCTGCCAGCCACCATCCCAAGTCACA...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CAA 90 bp | GTCATGAGTGTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTaGCAGCAGAGACTTTGGCAGCCAGAGGACTCGGGGAAACACGAG | + |
|
Preference number: 2 (lower is better) Translates to: VMSVPMETLRKQTST*QQRLWQPEDSGKHE Trigger: CTCGTGTTTCCCCGAGTCCTCTGGCTGCCAAAGTCTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCACACTCATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR GCA 90 bp | CAGGAGACCCTGTTCCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTTCAAATCCCAGCTACTaGTTGATGTCTCACAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: QETLFHPGRSLSIGDLKASNPSY*LMSHSH Trigger: ATGGCTGTGAGACATCAAGCAGTAGCTGGGATTTGA...AGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CCA 90 bp | CATGAGTGTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGGGTGTGGAGCACGGATaGAATCGTGTGCCTTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HECAHGNFEKTNLDLAAEGVEHG*NRVPWE Trigger: TTCCCAAGGCACACGATTCCATCCGTGCTCCACACC...CTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCACACTCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTTTTCCAAAGGTCCCGAGTTCTAATTCTAGCAACCACAGTGTCTCACAACCTCTCAGGCTCCTACTaGTTTTACAAGAGCCGAGTC | + |
|
Preference number: 2 (lower is better) Translates to: QLFQRSRVLILATTVSHNLSGSY*FYKSRV Trigger: GACTCGGCTCTTGTAAAAGCAGTAGGAGCCTGAGAG...GTTGTGAGACACTGTGGTTGCTAGAATTAGAACTCGGGACCTTTGGAAAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAGACCCTGTTCCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTAGGAAAAAGAAAATGTaGTTGAGAGAATCCAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: QETLFHPGRSLSIGDLKARKKKM*LRESRI Trigger: GATTCTGGATTCTCTCAACCACATTTTCTTTTTCCT...AGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGCAACTATTATAAAGGCAAACATTTAATTGGGGCTGGCTTACGGTTTCAGGGAGCTGTGGCTCAATaGTCAACAGCACTGTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: QGNYYKGKHLIGAGLRFQGAVAQ*STALWT Trigger: GGTCCACAGTGCTGTTGATCATTGAGCCACAGCTCC...CTGAAACCGTAAGCCAGCCCCAATTAAATGTTTGCCTTTATAATAGTTGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTTTCCAAAGGTCCCGAGTTCTAATTCTAGCAACCACAGTGTCTCACAACATACACACCATACACTaGAGAGAGGGGACTCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: QLFQRSRVLILATTVSHNIHTIH*REGTPL Trigger: CAAAGGAGTCCCCTCTCTCCAGTGTATGGTGTGTAT...GTTGTGAGACACTGTGGTTGCTAGAATTAGAACTCGGGACCTTTGGAAAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CCA 90 bp | AATAACCAAATACCCTATAATTCTCTCTCTCTCACACACACACACGCACACACACATCTGAACTGCCATTaGGCTGGTGAGATGGCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: NNQIPYNSLSLTHTHAHTHLNCH*AGEMAQ Trigger: CTGAGCCATCTCACCAGCCCAATGGCAGTTCAGATG...TGTGTGTGCGTGTGTGTGTGTGAGAGAGAGAGAATTATAGGGTATTTGGTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CAA 90 bp | CATTATTATCATAGCAGGAAGCATAGCAGTATGCAGGAAGCCATTTaGCTGGAGGAGCTGAGAATTCTACATCTTGATCAGAAGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: HYYHSRKHSSMQEAI*LEELRILHLDQKAA Trigger: GGCTGCCTTCTGATCAAGATGTAGAATTCTCAGCTCCTCCAGCAAAATGGCTTCCTGCATACTGCTATGCTTCCTGCTATGATAATAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGCTGTTTAGATATAAACATTGGTAAAACAGTGACATGGCATGTTAGTTGGCTGATGGTGAGGCTGTaGCTGGGAAGACAGACGTCC | + |
|
Preference number: 2 (lower is better) Translates to: LCCLDINIGKTVTWHVSWLMVRL*LGRQTS Trigger: GGACGTCTGTCTTCCCAGGCACAGCCTCACCATCAG...CCAACTAACATGCCATGTCACTGTTTTACCAATGTTTATATCTAAACAGCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGCAACTATTATAAAGGCAAACATTTAATTGGGGCTGGCTTACGGTTTCAGGAGAATTCTACATCTTaGTCAGAAGGCAGCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QGNYYKGKHLIGAGLRFQENSTS*SEGSQE Trigger: CTCCTGGCTGCCTTCTGATCAAGATGTAGAATTCTC...CTGAAACCGTAAGCCAGCCCCAATTAAATGTTTGCCTTTATAATAGTTGCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTTTCCAAAGGTCCCGAGTTCTAATTCTAGCAACCACAGTGTCTCACAACTCAAAGATAGAGTTTTaGAGAGGGACAGCAATAATC | + |
|
Preference number: 2 (lower is better) Translates to: QLFQRSRVLILATTVSHNSKIEF*RGTAII Trigger: GATTATTGCTGTCCCTCTCCAAAACTCTATCTTTGA...GTTGTGAGACACTGTGGTTGCTAGAATTAGAACTCGGGACCTTTGGAAAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR GCA 90 bp | CAAGGCAACTATTATAAAGGCAAACATTTAATTGGGGCTGGCTTACGGTTTCAGGTGTGTCGAGAGCTTTaGTGTTTAGATATAAACATT | + |
|
Preference number: 2 (lower is better) Translates to: QGNYYKGKHLIGAGLRFQVCREL*CLDINI Trigger: AATGTTTATATCTAAACAGCAAAGCTCTCGACACAC...CTGAAACCGTAAGCCAGCCCCAATTAAATGTTTGCCTTTATAATAGTTGCCTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAGACCCTGTTCCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCCTTGCAGCAGAGACTTaGGCAGCCAGAGGACTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: PGDPVPPWAEFEHRRPQSLAAET*AARGLG Trigger: CCCGAGTCCTCTGGCTGCCAAAGTCTCTGCTGCAAG...GCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | GATGGTGAGGCTGTGCCTGGGAAGACAGACGTCCTGTaGTGTGGAGCACGGATGGAATCGTGTGCCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DGEAVPGKTDVL*CGARMESCALG Trigger: TCCCAAGGCACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTCACCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| 3UTR TCA 72 bp | TTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTaGCACTTCCTCCTGATAGTGCCATTCCCTAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSIGDLKAQHPW*HFLLIVPFPRG Trigger: GCCCCTAGGGAATGGCACTATCAGGAGGAAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | TTGATCAGAAGGCAGCCAGGAGACCCTGTTCCACCCTaGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LIRRQPGDPVPP*AEFEHRRPQSS Trigger: TGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTGGCTGCCTTCTGATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR GCA 72 bp | CCCAGCTACTGCTTGATGTCTCACAGCCATCTGAACTaGCATTGGGCTGGTGAGATGGCTCAGCAGGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSYCLMSHSHLN*HWAGEMAQQVR Trigger: TCTTACCTGCTGAGCCATCTCACCAGCCCAATGGCAGTTCAGATGGCTGTGAGACATCAAGCAGTAGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR GCA 72 bp | GAGGGCTCCTTAGCACTCTTTCCTAGACCTGTGTCCTaGAAGCCCAAAGAGGATCCCTCTATTACCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: EGSLALFPRPVS*KPKEDPSITWS Trigger: GCTCCAGGTAATAGAGGGATCCTCTTTGGGCTTGCAGGACACAGGTCTAGGAAAGAGTGCTAAGGAGCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR TCA 72 bp | TGTCTCAGGAAACCAAGTGCTGGAGCTGTGGCTCAATaGTCAACAGCACTGTGGACCCAAAGGAACCGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CLRKPSAGAVAQ*STALWTQRNRV Trigger: AACCCGGTTCCTTTGGGTCCACAGTGCTGTTGATCATTGAGCCACAGCTCCAGCACTTGGTTTCCTGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | TTGAGAAAACAAACCTCGACCTTGCAGCAGAGACTTTaGCAGCCAGAGGACTCGGGGAAACACGAGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRKQTSTLQQRL*QPEDSGKHEHS Trigger: AGAGTGCTCGTGTTTCCCCGAGTCCTCTGGCTGCCAAAGTCTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | AGAAGCCCTGTCTCAGGAAACCAAGTGCTGGAGCTGTaGCTCAATGATCAACAGCACTGTGGACCCAAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RSPVSGNQVLEL*LNDQQHCGPKG Trigger: TCCTTTGGGTCCACAGTGCTGTTGATCATTGAGCCACAGCTCCAGCACTTGGTTTCCTGAGACAGGGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR TCA 72 bp | AGCCATTTTGCTGGAGGAGCTGAGAATTCTACATCTTaGTCAGAAGGCAGCCAGGAGACCCTGTTCCACCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHFAGGAENSTS*SEGSQETLFHP Trigger: AGGGTGGAACAGGGTCTCCTGGCTGCCTTCTGATCAAGATGTAGAATTCTCAGCTCCTCCAGCAAAATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | TACTGCTTGATGTCTCACAGCCATCTGAACTGCCATTaGGCTGGTGAGATGGCTCAGCAGGTAAGAGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: YCLMSHSHLNCH*AGEMAQQVRVL Trigger: CAGTACTCTTACCTGCTGAGCCATCTCACCAGCCCAATGGCAGTTCAGATGGCTGTGAGACATCAAGCAGTA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | GATACAAGAGAAGCCCTGTCTCAGGAAACCAAGTGCTaGAGCTGTGGCTCAATGATCAACAGCACTGTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: DTREALSQETKC*SCGSMINSTVD Trigger: GTCCACAGTGCTGTTGATCATTGAGCCACAGCTCCAGCACTTGGTTTCCTGAGACAGGGCTTCTCTTGTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGAGACCCTGTTCCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCAAGATACCCAAGATTTaGAGGCAAAAATCAGGTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PGDPVPPWAEFEHRRPQSKIPKI*RQKSGK Trigger: CTTACCTGATTTTTGCCTCAAAATCTTGGGTATCTT...GCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | GTGTCCTGCAAGCCCAAAGAGGATCCCTCTATTACCTaGAGCCCCTTCCATAAAGACTCTTTCAAGGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VSCKPKEDPSIT*SPFHKDSFKAN Trigger: ATTTGCCTTGAAAGAGTCTTTATGGAAGGGGCTCCAGGTAATAGAGGGATCCTCTTTGGGCTTGCAGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTTTTCCAAAGGTCCCGAGTTCTAATTCTAGCAACCACAGTGTCTCACAACAAACAAACCTCGACCTaGCAGCAGAGACTTTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QLFQRSRVLILATTVSHNKQTST*QQRLWQ Trigger: CTGCCAAAGTCTCTGCTGCAAGGTCGAGGTTTGTTT...GTTGTGAGACACTGTGGTTGCTAGAATTAGAACTCGGGACCTTTGGAAAAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCAACTATTATAAAGGCAAACATTTAATTGGGGCTGGCTTACGGTTTCAGAGTCAACAGTGTGACTaGGGATGGTGGCTGGCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: QGNYYKGKHLIGAGLRFQSQQCD*GWWLAA Trigger: TGCTGCCAGCCACCATCCCAAGTCACACTGTTGACT...CTGAAACCGTAAGCCAGCCCCAATTAAATGTTTGCCTTTATAATAGTTGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | CCACCAATGGATAAAATGGTAACAAAGGAAACTTTCTaGTTAGGGCATTACACTTCCTTCCCTGTCACCACA | + |
|
Preference number: 3 (lower is better) Translates to: PPMDKMVTKETF*LGHYTSFPVTT Trigger: TGTGGTGACAGGGAAGGAAGTGTAATGCCCTAACCAGAAAGTTTCCTTTGTTACCATTTTATCCATTGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | GTCAACAGTGTGACTTGGGATGGTGGCTGGCAGCAGTaGGAGGAATTACCATTTAATAGACATAAAACTTTA | + |
|
Preference number: 3 (lower is better) Translates to: VNSVTWDGGWQQ*EELPFNRHKTL Trigger: TAAAGTTTTATGTCTATTAAATGGTAATTCCTCCCACTGCTGCCAGCCACCATCCCAAGTCACACTGTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | TGCTGTTTAGATATAAACATTGGTAAAACAGTGACATaGCATGTTAGTTGGTACACGCTGTCCCTTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: CCLDINIGKTVT*HVSWYTLSLLF Trigger: GAAGAGAAGGGACAGCGTGTACCAACTAACATGCCATGTCACTGTTTTACCAATGTTTATATCTAAACAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CCA 72 bp | AAACAACAAAGCAGAATGAGTATACACACCATACACTaGAGAGAGGGGACTCCTTTGAATCTTGGAATTACA | + |
|
Preference number: 3 (lower is better) Translates to: KQQSRMSIHTIH*REGTPLNLGIT Trigger: TGTAATTCCAAGATTCAAAGGAGTCCCCTCTCTCCAGTGTATGGTGTGTATACTCATTCTGCTTTGTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR-3UTR CAA 90 bp | CAAGGCAACTATTATAAAGGCAAACATTTAATTGGGGCTGGCTTACGGTTTCAGTTCAAAGATAGAGTTTaGGAGAGGGACAGCAATAAT | + |
|
Preference number: 3 (lower is better) Translates to: QGNYYKGKHLIGAGLRFQFKDRV*ERDSNN Trigger: ATTATTGCTGTCCCTCTCCAAAACTCTATCTTTGAA...CTGAAACCGTAAGCCAGCCCCAATTAAATGTTTGCCTTTATAATAGTTGCCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR TCA 72 bp | CAAACTGCATCTCTTCAGGACACACCTAACTACATCTaGCATACACACTATCTATTGAAGCTTTTACATACT | + |
|
Preference number: 3 (lower is better) Translates to: QTASLQDTPNYI*HTHYLLKLLHT Trigger: AGTATGTAAAAGCTTCAATAGATAGTGTGTATGTCAGATGTAGTTAGGTGTGTCCTGAAGAGATGCAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTGCTCGCGAAGCTCGTaGAGCGGCACAGCCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GCAWEDRRPVVWSTDGIVCSRSS*SGTACT Trigger: GGTGCAGGCTGTGCCGCTGCACGAGCTTCGCGAGCA...CACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGCACAGCCTGCACCACTaGCTGCAGCGCACGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GCAWEDRRPVVWSTDGIVHSLHH*LQRTKL Trigger: GAGCTTCGTGCGCTGCAGTCAGTGGTGCAGGCTGTG...CACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | CCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGCGCTCACAGATCTGCTaGGGACTATCCATGACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPWAEFEHRRPQSSAPVVRSQIC*GLSMTA Trigger: GGCCGTCATGGATAGTCCTCAGCAGATCTGTGAGCG...CACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | GCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTACAGAGTCATCAGGGTaGGTCAGTCCCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVPGKTDVLWCGARMESCTESSG*VSPLCR Trigger: CCTGCAGAGGGGACTGACTCACCCTGATGACTCTGT...ACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | GCTGATGGTGAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGCAGCGACACCAATCATaGTGGGGTCTTGACTATCCG | + |
|
Preference number: 4 (lower is better) Translates to: ADGEAVPGKTDVLWCGARQRHQS*WGLDYP Trigger: CGGATAGTCAAGACCCCACCATGATTGGTGTCGCTG...CCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTCACCATCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGGATATCCTACTCTCATaGGGACACGTTCAAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAVPGKTDVLWCGARMESDILLS*GHVQSG Trigger: CCCGCTTTGAACGTGTCCTCATGAGAGTAGGATATC...CGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGGTCAGCCCCTTCTACTaGTGTTGTGGCAACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: EAVPGKTDVLWCGARMESVSPFY*CCGNRF Trigger: AAACCTGTTGCCACAACAGCAGTAGAAGGGGCTGAC...CGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTTTAAACATAAGTCTCTaGGCCCAGGGCTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: AVPGKTDVLWCGARMESCLNISL*AQGWSA Trigger: TGCAGACCAGCCCTGGGCTCAGAGACTTATGTTTAA...ACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR GCA 90 bp | GCTGATGGTGAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGGTTCCCAAAGATCTCTaGAACTGTCTTGGAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ADGEAVPGKTDVLWCGARVPKDL*NCLGIG Trigger: GCCAATTCCAAGACAGTTGCAGAGATCTTTGGGAAC...CCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTCACCATCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR TCA 90 bp | GCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTGCCAGAGAAAGGGTCTaGATCTGCGCCAACAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVPGKTDVLWCGARMESCARERV*ICANNY Trigger: ATAATTGTTGGCGCAGATTCAGACCCTTTCTCTGGC...ACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | GCTGATGGTGAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGCACTTAGGTACGCTCTaGGCCTCAAATAATTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADGEAVPGKTDVLWCGARHLGTL*ASNNLS Trigger: ACTCAAATTATTTGAGGCTCAGAGCGTACCTAAGTG...CCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTCACCATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAGACCCTGTTCCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTGTCAGCCCCTTCTACTaGTGTTGTGGCAACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QETLFHPGRSLSIGDLKAVSPFY*CCGNRF Trigger: AAACCTGTTGCCACAACAGCAGTAGAAGGGGCTGAC...AGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTGCTTCCAGGCCAGCCTaGGTTAGTGATATTCTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLASRPA*VSDILD Trigger: GTCGAGAATATCACTAACCCAGGCTGGCCTGGAAGC...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTCGACACCAATCATGGTaGGGTCTTGACTATCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLRHQSW*GLDYPP Trigger: TGGCGGATAGTCAAGACCCCACCATGATTGGTGTCG...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | GCTGATGGTGAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGCTTCTACTGCTGTTGTaGCAACAGGTTTCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: ADGEAVPGKTDVLWCGARLLLLL*QQVSHS Trigger: ACTATGTGAAACCTGTTGCCACAACAGCAGTAGAAG...CCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTCACCATCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| 3UTR CAA 72 bp | GTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTaGCAGCAGAGACTTTGGCAGCCAGAGGACTCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VPMETLRKQTST*QQRLWQPEDSG Trigger: CCCCGAGTCCTCTGGCTGCCAAAGTCTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTGATATCCTACTCTCATaGGGACACGTTCAAAGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLDILLS*GHVQSG Trigger: CCCGCTTTGAACGTGTCCTCATGAGAGTAGGATATC...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | GGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGGAAGCATTCTTTGCTTaGTATCCTACTCTCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GCAWEDRRPVVWSTDGIVEAFFA*YPTLMR Trigger: CCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTC...CACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR TCA 90 bp | GAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGGAGCCTCAAATAATTTaGGTTCCCAAAGATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EAVPGKTDVLWCGARMESEPQII*VPKDLC Trigger: GCAGAGATCTTTGGGAACTCAAATTATTTGAGGCTC...CGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR CCA 90 bp | GCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTGTTTTCCTTCAACACTaGATCCCAGGATTCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: AVPGKTDVLWCGARMESCVFLQH*IPGFQL Trigger: CAGTTGGAATCCTGGGATCCAGTGTTGAAGGAAAAC...ACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| 3UTR CAA 72 bp | GACCCAAAGGAACCGGGTTCAAATCCCAGCTACTGCTaGATGTCTCACAGCCATCTGAACTGCCATTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPKEPGSNPSYC*MSHSHLNCHWA Trigger: AGCCCAATGGCAGTTCAGATGGCTGTGAGACATCAAGCAGTAGCTGGGATTTGAACCCGGTTCCTTTGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | GTGGACCCAAAGGAACCGGGTTCAAATCCCAGCTACTGCTTGATGTCTCACAGCGCAGCCTCTCCAGAATaGAGACACACAAAGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VDPKEPGSNPSYCLMSHSAASPE*RHTKQS Trigger: AGACTGCTTTGTGTGTCTCCATTCTGGAGAGGCTGC...GCTGTGAGACATCAAGCAGTAGCTGGGATTTGAACCCGGTTCCTTTGGGTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | CCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGAAACTTCACAAATCCTaGCAGATAGAAGCCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPWAEFEHRRPQSSAPVVKLHKS*QIEARE Trigger: TTCTCTGGCTTCTATCTGCCAGGATTTGTGAAGTTT...CACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR GCA 90 bp | GAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGCTTGGAATTGGCAAGTaGTTTTACCAGTTCATATTT | + |
|
Preference number: 4 (lower is better) Translates to: EAVPGKTDVLWCGARMESLGIGK*FYQFIF Trigger: AAATATGAACTGGTAAAAGCACTTGCCAATTCCAAG...CGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR CCA 90 bp | CCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGTTACCAGTTCATATTTaGCATCCTTTGAAGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PPWAEFEHRRPQSSAPVVLPVHI*HPLKLC Trigger: ACAAAGCTTCAAAGGATGCCAAATATGAACTGGTAA...CACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTCTTCTACTGCTGTTGTaGCAACAGGTTTCACATAGT | + |
|
Preference number: 4 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLLLLLL*QQVSHS Trigger: ACTATGTGAAACCTGTTGCCACAACAGCAGTAGAAG...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | GCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTTTACCAGTTCATATTTaGCATCCTTTGAAGCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVPGKTDVLWCGARMESCLPVHI*HPLKLC Trigger: ACAAAGCTTCAAAGGATGCCAAATATGAACTGGTAA...ACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR TCA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTCTCAGTAACAGCTTCTaGATTTTCAACAATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLLSNSF*IFNNSS Trigger: GGAAGAATTGTTGAAAATTCAGAAGCTGTTACTGAG...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | ATCAGCCCAGCCCTCAGTGATGATGACCCACCAATGGATAAAATGGTAACAAAGGGGAGTCTCGAGACATaGAGGAAAACCAGGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISPALSDDDPPMDKMVTKGSLET*RKTRIL Trigger: CAGAATCCTGGTTTTCCTCCATGTCTCGAGACTCCC...CTTTGTTACCATTTTATCCATTGGTGGGTCATCATCACTGAGGGCTGGGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | AATAACCAAATACCCTATAATTCTCTCTCTCTCACACACACACACGCACACACATCTGCAGGTCAAGCCTaGGGTTCCTGGCCAAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NNQIPYNSLSLTHTHAHTSAGQA*GSWPSE Trigger: TTCACTTGGCCAGGAACCTCAGGCTTGACCTGCAGA...TGTGTGTGCGTGTGTGTGTGTGAGAGAGAGAGAATTATAGGGTATTTGGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR GCA 90 bp | CATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGACTTTGGCAGCCAAGTCATCAGTCTGCTaGTCAGGCGATAAATACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HGNFEKTNLDLAAETLAAKSSVC*SGDKYR Trigger: CCTGTATTTATCGCCTGAGCAGCAGACTGATGACTT...GGCTGCCAAAGTCTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR GCA 90 bp | CATGAGTGTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGGTTCCCAAAGATCTCTaGAACTGTCTTGGAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HECAHGNFEKTNLDLAAEVPKDL*NCLGIG Trigger: GCCAATTCCAAGACAGTTGCAGAGATCTTTGGGAAC...CTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCACACTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | CATGAGTGTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGGTTTTCCTTCAACACTaGATCCCAGGATTCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: HECAHGNFEKTNLDLAAEVFLQH*IPGFQL Trigger: CAGTTGGAATCCTGGGATCCAGTGTTGAAGGAAAAC...CTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCACACTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | CAGCTTTTCCAAAGGTCCCGAGTTCTAATTCTAGCAACCACAGTGTCTCACAACCAATCTGCGACAGAGTaGGGGTTTTTACAGAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QLFQRSRVLILATTVSHNQSATE*GFLQSH Trigger: ATGACTCTGTAAAAACCCTCACTCTGTCGCAGATTG...GTTGTGAGACACTGTGGTTGCTAGAATTAGAACTCGGGACCTTTGGAAAAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | CAGCTTTTCCAAAGGTCCCGAGTTCTAATTCTAGCAACCACAGTGTCTCACAACTGGATATCTGGTCAATaGCTCCTTCTTGAGCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLFQRSRVLILATTVSHNWISGQ*LLLEQG Trigger: ACCTTGCTCAAGAAGGAGTCATTGACCAGATATCCA...GTTGTGAGACACTGTGGTTGCTAGAATTAGAACTCGGGACCTTTGGAAAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | CATGAGTGTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGGAGCCTCAAATAATTTaGGTTCCCAAAGATCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HECAHGNFEKTNLDLAAEEPQII*VPKDLC Trigger: GCAGAGATCTTTGGGAACTCAAATTATTTGAGGCTC...CTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCACACTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| 3UTR CAA 72 bp | CATAGCAGGAAGCATAGCAGTATGCAGGAAGCCATTTaGCTGGAGGAGCTGAGAATTCTACATCTTGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSRKHSSMQEAI*LEELRILHLDQ Trigger: CTGATCAAGATGTAGAATTCTCAGCTCCTCCAGCAAAATGGCTTCCTGCATACTGCTATGCTTCCTGCTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | AATAACCAAATACCCTATAATTCTCTCTCTCTCACACACACACACGCACACACATTAAACATAAGTCTCTaGGCCCAGGGCTGGTCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: NNQIPYNSLSLTHTHAHTLNISL*AQGWSA Trigger: TGCAGACCAGCCCTGGGCTCAGAGACTTATGTTTAA...TGTGTGTGCGTGTGTGTGTGTGAGAGAGAGAGAATTATAGGGTATTTGGTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR GCA 90 bp | CATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGACTTTGGCAGCCACAATTCTTCCAATCTaGGACAGAGTGAGGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HGNFEKTNLDLAAETLAATILPI*DRVRVF Trigger: AAAAACCCTCACTCTGTCGCAGATTGGAAGAATTGT...GGCTGCCAAAGTCTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR GCA 90 bp | CAAGGCAACTATTATAAAGGCAAACATTTAATTGGGGCTGGCTTACGGTTTCAGAGGAAGTCATCAGTCTaGTGCTCAGGCGATAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: QGNYYKGKHLIGAGLRFQRKSSV*CSGDKY Trigger: GTATTTATCGCCTGAGCAGCAGACTGATGACTTCCT...CTGAAACCGTAAGCCAGCCCCAATTAAATGTTTGCCTTTATAATAGTTGCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CCA 90 bp | AATAACCAAATACCCTATAATTCTCTCTCTCTCACACACACACACGCACACACATGTTCCCGATTGTTCTaGTTAAGCAAGGAGAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNQIPYNSLSLTHTHAHTCSRLF*LSKENS Trigger: GCTGTTCTCCTTGCTTAACCAGAACAATCGGGAACA...TGTGTGTGCGTGTGTGTGTGTGAGAGAGAGAGAATTATAGGGTATTTGGTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | CTTTGCTGTTTAGATATAAACATTGGTAAAACAGTGACATGGCATGTTAGTTGGGCTGAGGACTATCCATaGCGGCCAGGTTTCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LCCLDINIGKTVTWHVSWAEDYP*RPGFQK Trigger: TTTTTGGAAACCTGGCCGTCATGGATAGTCCTCAGC...CCAACTAACATGCCATGTCACTGTTTTACCAATGTTTATATCTAAACAGCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | AATAACCAAATACCCTATAATTCTCTCTCTCTCACACACACACACGCACACACACACTTAGGTACGCTCTaGGCCTCAAATAATTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NNQIPYNSLSLTHTHAHTHLGTL*ASNNLS Trigger: ACTCAAATTATTTGAGGCTCAGAGCGTACCTAAGTG...TGTGTGTGCGTGTGTGTGTGTGAGAGAGAGAGAATTATAGGGTATTTGGTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR TCA 90 bp | ACAGTGACACACAGCCGGAATACCAACGCCAAACAAGTTTGGATTTATTTTATTGAAGCATTCTTTGCTTaGTATCCTACTCTCATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTHSRNTNAKQVWIYFIEAFFA*YPTLMR Trigger: CCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTC...AATAAAATAAATCCAAACTTGTTTGGCGTTGGTATTCCGGCTGTGTGTCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS GCA 90 bp | CGTAGCTCCGCCGCCTGCTCGCGAAGCTCGTGCAGCGGCACAGCCTaGACCACTGACTGCAGCGCACGAAGCTCCTCCAGCGGCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSAACSRSSCSGTA*TTDCSARSSSSGAS Trigger: GGAGGCGCCGCTGGAGGAGCTTCGTGCGCTGCAGTCAGTGGTGCAGGCTGTGCCGCTGCACGAGCTTCGCGAGCAGGCGGCGGAGCTACG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS GCA 90 bp | AACAGCGGGCGGAGGCGTAGCTCCGCCGCCTGCTCGCGAAGCTCGTaGAGCGGCACAGCCTGCACCACTGACTGCAGCGCACGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NSGRRRSSAACSRSS*SGTACTTDCSARSS Trigger: GGAGCTTCGTGCGCTGCAGTCAGTGGTGCAGGCTGTGCCGCTGCACGAGCTTCGCGAGCAGGCGGCGGAGCTACGCCTCCGCCCGCTGTT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS GCA 90 bp | TGGTTAAGCAAGGAGAACAGCGGGCGGAGGCGTAGCTCCGCCGCCTaGTCGCGAAGCTCGTGCAGCGGCACAGCCTGCACCACTGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: WLSKENSGRRRSSAA*SRSSCSGTACTTDC Trigger: GCAGTCAGTGGTGCAGGCTGTGCCGCTGCACGAGCTTCGCGAGCAGGCGGCGGAGCTACGCCTCCGCCCGCTGTTCTCCTTGCTTAACCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 90 bp | TTACAGAGTCATCAGGGTGAGTCAGTCCCCTCTGCAGGTCAAGCCTaGGGTTCCTGGCCAAGTGAATCGGCTCCACAGCTTGGAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQSHQGESVPSAGQA*GSWPSESAPQLGAA Trigger: GGCTGCTCCAAGCTGTGGAGCCGATTCACTTGGCCAGGAACCTCAGGCTTGACCTGCAGAGGGGACTGACTCACCCTGATGACTCTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | GCTGATGGTGAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGCCCCTTCTACTGCTGTaGTGGCAACAGGTTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: ADGEAVPGKTDVLWCGARPLLLL*WQQVSH Trigger: ATGTGAAACCTGTTGCCACAACAGCAGTAGAAGGGG...CCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTCACCATCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS TCA 90 bp | CTTCCAATCTGCGACAGAGTGAGGGTTTTTACAGAGTCATCAGGGTaGGTCAGTCCCCTCTGCAGGTCAAGCCTGAGGTTCCTGGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPICDRVRVFTESSG*VSPLCRSSLRFLAK Trigger: CTTGGCCAGGAACCTCAGGCTTGACCTGCAGAGGGGACTGACTCACCCTGATGACTCTGTAAAAACCCTCACTCTGTCGCAGATTGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGCCGTGGAAGCATTCTTaGCTTGATATCCTACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EAVPGKTDVLWCGARMESPWKHS*LDILLS Trigger: TGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGG...CGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGACCCTGTTCCACCCTGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCCCCTTCTACTGCTGTaGTGGCAACAGGTTTCACAT | + |
|
Preference number: 5 (lower is better) Translates to: QETLFHPGRSLSIGDLKAPLLLL*WQQVSH Trigger: ATGTGAAACCTGTTGCCACAACAGCAGTAGAAGGGG...AGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCAGGGTGGAACAGGGTCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 90 bp | GCTGTGAAAACTTTCAAGGCAGCACAGTGTAGCTCCGGGAAGGGCTaGTTACTGATACCACGGAAAAGCTCCAGGGAGTCTCGAGACATG | + |
|
Preference number: 5 (lower is better) Translates to: AVKTFKAAQCSSGKG*LLIPRKSSRESRDM Trigger: CATGTCTCGAGACTCCCTGGAGCTTTTCCGTGGTATCAGTAACCAGCCCTTCCCGGAGCTACACTGTGCTGCCTTGAAAGTTTTCACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | GAGGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGATCTCTGCAACTGTCTaGGAATTGGCAAGTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: EAVPGKTDVLWCGARMESISATV*ELASAF Trigger: AAAAGCACTTGCCAATTCCAAGACAGTTGCAGAGAT...CGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR CAA 90 bp | GTGGACCCAAAGGAACCGGGTTCAAATCCCAGCTACTGCTTGATGTCTCACAGCGCAGTCTGTTCCCGATaGTTCTGGTTAAGCAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VDPKEPGSNPSYCLMSHSAVCSR*FWLSKE Trigger: CTCCTTGCTTAACCAGAACAATCGGGAACAGACTGC...GCTGTGAGACATCAAGCAGTAGCTGGGATTTGAACCCGGTTCCTTTGGGTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | GCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTATCTCTGCAACTGTCTaGGAATTGGCAAGTGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: AVPGKTDVLWCGARMESCISATV*ELASAF Trigger: AAAAGCACTTGCCAATTCCAAGACAGTTGCAGAGAT...ACACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS CCA 90 bp | CACTGGATCCCAGGATTCCAACTGTGTCGACAGCGACACCAATCATaGTGGGGTCTTGACTATCCGCCATTTCAAACACCTTCTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: HWIPGFQLCRQRHQS*WGLDYPPFQTPSPE Trigger: TTCTGGAGAAGGTGTTTGAAATGGCGGATAGTCAAGACCCCACCATGATTGGTGTCGCTGTCGACACAGTTGGAATCCTGGGATCCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTTTCTTGAGCAAGGTATaGTCGTCCGTGATGGGTATA | + |
|
Preference number: 5 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLFLSKV*SSVMGI Trigger: TATACCCATCACGGACGACAATACCTTGCTCAAGAA...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | GGCTGTGCCTGGGAAGACAGACGTCCTGTGGTGTGGAGCACGGATGGAATCGTGTTTACCAGTTCATATTaGGCATCCTTTGAAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GCAWEDRRPVVWSTDGIVFTSSY*ASFEAL Trigger: CAAAGCTTCAAAGGATGCCAAATATGAACTGGTAAA...CACGATTCCATCCGTGCTCCACACCACAGGACGTCTGTCTTCCCAGGCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS TCA 90 bp | GCATCCAAGCACCTAATCTTCAGCTCCGTGGAAGCATTCTTTGCTTaGTATCCTACTCTCATGAGGACACGTTCAAAGCGGGTTCCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ASKHLIFSSVEAFFA*YPTLMRTRSKRVPV Trigger: GACAGGAACCCGCTTTGAACGTGTCCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGGAGCTGAAGATTAGGTGCTTGGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS GCA 90 bp | GAGGAAAACCAGGATTCTGTCATTCCCAGGAAGTCATCAGTCTGCTaGTCAGGCGATAAATACAGGAGAGAGGAAACTGCATCCAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EENQDSVIPRKSSVC*SGDKYRREETASKH Trigger: GTGCTTGGATGCAGTTTCCTCTCTCCTGTATTTATCGCCTGAGCAGCAGACTGATGACTTCCTGGGAATGACAGAATCCTGGTTTTCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 90 bp | TGGATCCCAGGATTCCAACTGTGTCGACAGCGACACCAATCATGGTaGGGTCTTGACTATCCGCCATTTCAAACACCTTCTCCAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: WIPGFQLCRQRHQSW*GLDYPPFQTPSPEK Trigger: TTTTTCTGGAGAAGGTGTTTGAAATGGCGGATAGTCAAGACCCCACCATGATTGGTGTCGCTGTCGACACAGTTGGAATCCTGGGATCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | TGGGCGGAGTTTGAGCATAGGAGACCTCAAAGCTCAGCACCCGTGGTGACACTTAACAGCTCAGCATTATaGAGAATCTCAGTAACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WAEFEHRRPQSSAPVVTLNSSAL*RISVTA Trigger: AGCTGTTACTGAGATTCTCAATAATGCTGAGCTGTT...AAGTGTCACCACGGGTGCTGAGCTTTGAGGTCTCCTATGCTCAAACTCCGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS GCA 90 bp | AACTGCATCCAAGCACCTAATCTTCAGCTCCGTGGAAGCATTCTTTaGTTGATATCCTACTCTCATGAGGACACGTTCAAAGCGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NCIQAPNLQLRGSIL*LISYSHEDTFKAGS Trigger: GGAACCCGCTTTGAACGTGTCCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGGAGCTGAAGATTAGGTGCTTGGATGCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS GCA 90 bp | ATGGAGGAAAACCAGGATTCTGTCATTCCCAGGAAGTCATCAGTCTaGTGCTCAGGCGATAAATACAGGAGAGAGGAAACTGCATCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: MEENQDSVIPRKSSV*CSGDKYRREETASK Trigger: CTTGGATGCAGTTTCCTCTCTCCTGTATTTATCGCCTGAGCAGCAGACTGATGACTTCCTGGGAATGACAGAATCCTGGTTTTCCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 90 bp | CAAAGCGGGTTCCTGTCTTCTGTAAAACTTGTTTTCCTTCAACACTaGATCCCAGGATTCCAACTGTGTCGACAGCGACACCAATCATGG | + |
|
Preference number: 5 (lower is better) Translates to: QSGFLSSVKLVFLQH*IPGFQLCRQRHQSW Trigger: CCATGATTGGTGTCGCTGTCGACACAGTTGGAATCCTGGGATCCAGTGTTGAAGGAAAACAAGTTTTACAGAAGACAGGAACCCGCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 90 bp | GATGGGTATAAGCTAGTGATGTCACCATTTCTATACAGGTGGCTCTaGCTAACACGTCCTCACCCGTCAGCTCTTTTAGGAGTTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DGYKLVMSPFLYRWL*LTRPHPSALLGVES Trigger: TGACTCAACTCCTAAAAGAGCTGACGGGTGAGGACGTGTTAGTCAGAGCCACCTGTATAGAAATGGTGACATCACTAGCTTATACCCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 90 bp | TTTGTCATGTTCCACAGACCGGTCCATCACAAACTCTACAAAACCTaGACTGTTAAACATAAGTCTCTGAGCCCAGGGCTGGTCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FVMFHRPVHHKLYKT*TVKHKSLSPGLVCN Trigger: ATTGCAGACCAGCCCTGGGCTCAGAGACTTATGTTTAACAGTCCAGGTTTTGTAGAGTTTGTGATGGACCGGTCTGTGGAACATGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR CAA 90 bp | CATGAGTGTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGGAGTCACCAGTCCACTaGTGGTACAGTAGTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HECAHGNFEKTNLDLAAEESPVH*WYSSLK Trigger: CTTTAAACTACTGTACCACAAGTGGACTGGTGACTC...CTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCACACTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | CATGAGTGTGCCCATGGAAACTTTGAGAAAACAAACCTCGACCTTGCAGCAGAGCCGTGGAAGCATTCTTaGCTTGATATCCTACTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HECAHGNFEKTNLDLAAEPWKHS*LDILLS Trigger: TGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGG...CTCTGCTGCAAGGTCGAGGTTTGTTTTCTCAAAGTTTCCATGGGCACACTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 90 bp | TCTTCAGCTCCGTGGAAGCATTCTTTGCTTGATATCCTACTCTCATaGGGACACGTTCAAAGCGGGTTCCTGTCTTCTGTAAAACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: SSAPWKHSLLDILLS*GHVQSGFLSSVKLV Trigger: AACAAGTTTTACAGAAGACAGGAACCCGCTTTGAACGTGTCCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGGAGCTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS CCA 90 bp | CTGCAACTGTCTTGGAATTGGCAAGTGCTTTTACCAGTTCATATTTaGCATCCTTTGAAGCTTTGTCATGTTCCACAGACCGGTCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LQLSWNWQVLLPVHI*HPLKLCHVPQTGPS Trigger: TGATGGACCGGTCTGTGGAACATGACAAAGCTTCAAAGGATGCCAAATATGAACTGGTAAAAGCACTTGCCAATTCCAAGACAGTTGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS TCA 90 bp | AAGGGTCTGAATCTGCGCCAACAATTATATTGGATATCTGGTCAATaGCTCCTTCTTGAGCAAGGTATTGTCGTCCGTGATGGGTATAAG | + |
|
Preference number: 5 (lower is better) Translates to: KGLNLRQQLYWISGQ*LLLEQGIVVRDGYK Trigger: CTTATACCCATCACGGACGACAATACCTTGCTCAAGAAGGAGTCATTGACCAGATATCCAATATAATTGTTGGCGCAGATTCAGACCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 90 bp | TGGCAACAGGTTTCACATAGTATGGACCTTCACTTAGGTACGCTCTaGGCCTCAAATAATTTGAGTTCCCAAAGATCTCTGCAACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WQQVSHSMDLHLGTL*ASNNLSSQRSLQLS Trigger: AGACAGTTGCAGAGATCTTTGGGAACTCAAATTATTTGAGGCTCAGAGCGTACCTAAGTGAAGGTCCATACTATGTGAAACCTGTTGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS-3UTR CAA 90 bp | CAAGGCAACTATTATAAAGGCAAACATTTAATTGGGGCTGGCTTACGGTTTCAGGTCAATGACTCCTTCTaGAGCAAGGTATTGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGNYYKGKHLIGAGLRFQVNDSF*SKVLSS Trigger: GGACGACAATACCTTGCTCAAGAAGGAGTCATTGAC...CTGAAACCGTAAGCCAGCCCCAATTAAATGTTTGCCTTTATAATAGTTGCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | CAGCTTTTCCAAAGGTCCCGAGTTCTAATTCTAGCAACCACAGTGTCTCACAACGCGCCAACAATTATATaGGATATCTGGTCAATGACT | + |
|
Preference number: 5 (lower is better) Translates to: QLFQRSRVLILATTVSHNAPTII*DIWSMT Trigger: AGTCATTGACCAGATATCCAATATAATTGTTGGCGC...GTTGTGAGACACTGTGGTTGCTAGAATTAGAACTCGGGACCTTTGGAAAAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 90 bp | CCTCACCCGTCAGCTCTTTTAGGAGTTGAGTCACCAGTCCACTTGTaGTACAGTAGTTTAAAGATTCTGATGACACAGAAGAAATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: PHPSALLGVESPVHL*YSSLKILMTQKKYL Trigger: TAGATATTTCTTCTGTGTCATCAGAATCTTTAAACTACTGTACCACAAGTGGACTGGTGACTCAACTCCTAAAAGAGCTGACGGGTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS-3UTR CAA 90 bp | ATCAGCCCAGCCCTCAGTGATGATGACCCACCAATGGATAAAATGGTAACAAAGTTTACCAGTTCATATTaGGCATCCTTTGAAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: ISPALSDDDPPMDKMVTKFTSSY*ASFEAL Trigger: CAAAGCTTCAAAGGATGCCAAATATGAACTGGTAAA...CTTTGTTACCATTTTATCCATTGGTGGGTCATCATCACTGAGGGCTGGGCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 90 bp | CTGTTTCAACAGCTCAGCATTATTGAGAATCTCAGTAACAGCTTCTaGATTTTCAACAATTCTTCCAATCTGCGACAGAGTGAGGGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: LFQQLSIIENLSNSF*IFNNSSNLRQSEGF Trigger: AAAACCCTCACTCTGTCGCAGATTGGAAGAATTGTTGAAAATTCAGAAGCTGTTACTGAGATTCTCAATAATGCTGAGCTGTTGAAACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 90 bp | TCAAATAATTTGAGTTCCCAAAGATCTCTGCAACTGTCTTGGAATTaGCAAGTGCTTTTACCAGTTCATATTTGGCATCCTTTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SNNLSSQRSLQLSWN*QVLLPVHIWHPLKL Trigger: AAGCTTCAAAGGATGCCAAATATGAACTGGTAAAAGCACTTGCCAATTCCAAGACAGTTGCAGAGATCTTTGGGAACTCAAATTATTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS GCA 72 bp | CGGAGGCGTAGCTCCGCCGCCTGCTCGCGAAGCTCGTaGAGCGGCACAGCCTGCACCACTGACTGCAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRRSSAACSRSS*SGTACTTDCSA Trigger: TGCGCTGCAGTCAGTGGTGCAGGCTGTGCCGCTGCACGAGCTTCGCGAGCAGGCGGCGGAGCTACGCCTCCG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS GCA 72 bp | AAGGAGAACAGCGGGCGGAGGCGTAGCTCCGCCGCCTaGTCGCGAAGCTCGTGCAGCGGCACAGCCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: KENSGRRRSSAA*SRSSCSGTACT Trigger: GGTGCAGGCTGTGCCGCTGCACGAGCTTCGCGAGCAGGCGGCGGAGCTACGCCTCCGCCCGCTGTTCTCCTT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS GCA 72 bp | CGAAGCTCGTGCAGCGGCACAGCCTGCACCACTGACTaGAGCGCACGAAGCTCCTCCAGCGGCGCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSCSGTACTTD*SARSSSSGASS Trigger: GCTGGAGGCGCCGCTGGAGGAGCTTCGTGCGCTGCAGTCAGTGGTGCAGGCTGTGCCGCTGCACGAGCTTCG 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS GCA 72 bp | GCCGCCTGCTCGCGAAGCTCGTGCAGCGGCACAGCCTaGACCACTGACTGCAGCGCACGAAGCTCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AACSRSSCSGTA*TTDCSARSSSS Trigger: GCTGGAGGAGCTTCGTGCGCTGCAGTCAGTGGTGCAGGCTGTGCCGCTGCACGAGCTTCGCGAGCAGGCGGC 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 72 bp | CATCAGGGTGAGTCAGTCCCCTCTGCAGGTCAAGCCTaGGGTTCCTGGCCAAGTGAATCGGCTCCACAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: HQGESVPSAGQA*GSWPSESAPQL Trigger: AAGCTGTGGAGCCGATTCACTTGGCCAGGAACCTCAGGCTTGACCTGCAGAGGGGACTGACTCACCCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CAA 90 bp | AGCAGCCTCTCCAGAATGGAGACACACAAAGCAGTCTGTTCCCGATaGTTCTGGTTAAGCAAGGAGAACAGCGGGCGGAGGCGTAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSLSRMETHKAVCSR*FWLSKENSGRRRSS Trigger: GGAGCTACGCCTCCGCCCGCTGTTCTCCTTGCTTAACCAGAACAATCGGGAACAGACTGCTTTGTGTGTCTCCATTCTGGAGAGGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 72 bp | TGCGACAGAGTGAGGGTTTTTACAGAGTCATCAGGGTaGGTCAGTCCCCTCTGCAGGTCAAGCCTGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: CDRVRVFTESSG*VSPLCRSSLRF Trigger: GAACCTCAGGCTTGACCTGCAGAGGGGACTGACTCACCCTGATGACTCTGTAAAAACCCTCACTCTGTCGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CAA 72 bp | TCCAGAATGGAGACACACAAAGCAGTCTGTTCCCGATaGTTCTGGTTAAGCAAGGAGAACAGCGGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRMETHKAVCSR*FWLSKENSGRR Trigger: CCTCCGCCCGCTGTTCTCCTTGCTTAACCAGAACAATCGGGAACAGACTGCTTTGTGTGTCTCCATTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 72 bp | CCAGGATTCCAACTGTGTCGACAGCGACACCAATCATaGTGGGGTCTTGACTATCCGCCATTTCAAACACCT | + |
|
Preference number: 6 (lower is better) Translates to: PGFQLCRQRHQS*WGLDYPPFQTP Trigger: AGGTGTTTGAAATGGCGGATAGTCAAGACCCCACCATGATTGGTGTCGCTGTCGACACAGTTGGAATCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 72 bp | GGATTCCAACTGTGTCGACAGCGACACCAATCATGGTaGGGTCTTGACTATCCGCCATTTCAAACACCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GFQLCRQRHQSW*GLDYPPFQTPS Trigger: AGAAGGTGTTTGAAATGGCGGATAGTCAAGACCCCACCATGATTGGTGTCGCTGTCGACACAGTTGGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CAA 90 bp | CAGGATTCCAACTGTGTCGACAGCGACACCAATCATGGTGGGGTCTaGACTATCCGCCATTTCAAACACCTTCTCCAGAAAAACAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: QDSNCVDSDTNHGGV*TIRHFKHLLQKNRV Trigger: TACCCTGTTTTTCTGGAGAAGGTGTTTGAAATGGCGGATAGTCAAGACCCCACCATGATTGGTGTCGCTGTCGACACAGTTGGAATCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 72 bp | ACTGTGTCGACAGCGACACCAATCATGGTGGGGTCTTaGCTATCCGCCATTTCAAACACCTTCTCCAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: TVSTATPIMVGS*LSAISNTFSRK Trigger: TTTTCTGGAGAAGGTGTTTGAAATGGCGGATAGTCAAGACCCCACCATGATTGGTGTCGCTGTCGACACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 72 bp | TTCCACAGACCGGTCCATCACAAACTCTACAAAACCTaGACTGTTAAACATAAGTCTCTGAGCCCAGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: FHRPVHHKLYKT*TVKHKSLSPGL Trigger: CAGCCCTGGGCTCAGAGACTTATGTTTAACAGTCCAGGTTTTGTAGAGTTTGTGATGGACCGGTCTGTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS CAA 72 bp | AACTGTGTCGACAGCGACACCAATCATGGTGGGGTCTaGACTATCCGCCATTTCAAACACCTTCTCCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NCVDSDTNHGGV*TIRHFKHLLQK Trigger: TTTCTGGAGAAGGTGTTTGAAATGGCGGATAGTCAAGACCCCACCATGATTGGTGTCGCTGTCGACACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CAA 90 bp | TGCATCCAAGCACCTAATCTTCAGCTCCGTGGAAGCATTCTTTGCTaGATATCCTACTCTCATGAGGACACGTTCAAAGCGGGTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CIQAPNLQLRGSILC*ISYSHEDTFKAGSC Trigger: ACAGGAACCCGCTTTGAACGTGTCCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGGAGCTGAAGATTAGGTGCTTGGATGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS TCA 72 bp | AAGCTAGTGATGTCACCATTTCTATACAGGTGGCTCTaGCTAACACGTCCTCACCCGTCAGCTCTTTTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KLVMSPFLYRWL*LTRPHPSALLG Trigger: TCCTAAAAGAGCTGACGGGTGAGGACGTGTTAGTCAGAGCCACCTGTATAGAAATGGTGACATCACTAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 72 bp | CCGTGGAAGCATTCTTTGCTTGATATCCTACTCTCATaGGGACACGTTCAAAGCGGGTTCCTGTCTTCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PWKHSLLDILLS*GHVQSGFLSSV Trigger: TACAGAAGACAGGAACCCGCTTTGAACGTGTCCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS TCA 72 bp | CACCTAATCTTCAGCTCCGTGGAAGCATTCTTTGCTTaGTATCCTACTCTCATGAGGACACGTTCAAAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HLIFSSVEAFFA*YPTLMRTRSKR Trigger: CCGCTTTGAACGTGTCCTCATGAGAGTAGGATATCAAGCAAAGAATGCTTCCACGGAGCTGAAGATTAGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS GCA 72 bp | ACTGTTAAACATAAGTCTCTGAGCCCAGGGCTGGTCTaGAATAGCTGTGAAAACTTTCAAGGCAGCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TVKHKSLSPGLV*NSCENFQGSTV Trigger: CACTGTGCTGCCTTGAAAGTTTTCACAGCTATTGCAGACCAGCCCTGGGCTCAGAGACTTATGTTTAACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CCA 72 bp | TTCCTGTCTTCTGTAAAACTTGTTTTCCTTCAACACTaGATCCCAGGATTCCAACTGTGTCGACAGCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: FLSSVKLVFLQH*IPGFQLCRQRH Trigger: GTGTCGCTGTCGACACAGTTGGAATCCTGGGATCCAGTGTTGAAGGAAAACAAGTTTTACAGAAGACAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CAA 90 bp | TCTGCAACTGTCTTGGAATTGGCAAGTGCTTTTACCAGTTCATATTaGGCATCCTTTGAAGCTTTGTCATGTTCCACAGACCGGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SATVLELASAFTSSY*ASFEALSCSTDRSI Trigger: GATGGACCGGTCTGTGGAACATGACAAAGCTTCAAAGGATGCCAAATATGAACTGGTAAAAGCACTTGCCAATTCCAAGACAGTTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS TCA 72 bp | AACTCTACAAAACCTGGACTGTTAAACATAAGTCTCTaGGCCCAGGGCTGGTCTGCAATAGCTGTGAAAACT | + |
|
Preference number: 6 (lower is better) Translates to: NSTKPGLLNISL*AQGWSAIAVKT Trigger: AGTTTTCACAGCTATTGCAGACCAGCCCTGGGCTCAGAGACTTATGTTTAACAGTCCAGGTTTTGTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 72 bp | AACTCTACAAAACCTGGACTGTTAAACATAAGTCTCTaGGCCCAGGGCTGGTCTGCAATAGCCGATAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: NSTKPGLLNISL*AQGWSAIADKY Trigger: GTATTTATCGGCTATTGCAGACCAGCCCTGGGCTCAGAGACTTATGTTTAACAGTCCAGGTTTTGTAGAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135575.2 |
||
| CDS CAA 72 bp | CCGTCAGCTCTTTTAGGAGTTGAGTCACCAGTCCACTaGTGGTACAGTAGTTTAAAGATTCTGATGACACAG | + |
|
Preference number: 6 (lower is better) Translates to: PSALLGVESPVH*WYSSLKILMTQ Trigger: CTGTGTCATCAGAATCTTTAAACTACTGTACCACAAGTGGACTGGTGACTCAACTCCTAAAAGAGCTGACGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CAA 90 bp | CGTCCTCACCCGTCAGCTCTTTTAGGAGTTGAGTCACCAGTCCACTaGTGGTACAGTAGTTTAAAGATTCTGATGACACAGAAGAAATAT | + |
|
Preference number: 6 (lower is better) Translates to: RPHPSALLGVESPVH*WYSSLKILMTQKKY Trigger: ATATTTCTTCTGTGTCATCAGAATCTTTAAACTACTGTACCACAAGTGGACTGGTGACTCAACTCCTAAAAGAGCTGACGGGTGAGGACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS CAA 90 bp | TTGGCAAGTGCTTTTACCAGTTCATATTTGGCATCCTTTGAAGCTTaGTCATGTTCCACAGACCGGTCCATCACAAACTCTACAAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: LASAFTSSYLASFEA*SCSTDRSITNSTKP Trigger: AGGTTTTGTAGAGTTTGTGATGGACCGGTCTGTGGAACATGACAAAGCTTCAAAGGATGCCAAATATGAACTGGTAAAAGCACTTGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS TCA 72 bp | AATCTGCGCCAACAATTATATTGGATATCTGGTCAATaGCTCCTTCTTGAGCAAGGTATTGTCGTCCGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NLRQQLYWISGQ*LLLEQGIVVRD Trigger: ATCACGGACGACAATACCTTGCTCAAGAAGGAGTCATTGACCAGATATCCAATATAATTGTTGGCGCAGATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 72 bp | GTTTCACATAGTATGGACCTTCACTTAGGTACGCTCTaGGCCTCAAATAATTTGAGTTCCCAAAGATCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VSHSMDLHLGTL*ASNNLSSQRSL Trigger: CAGAGATCTTTGGGAACTCAAATTATTTGAGGCTCAGAGCGTACCTAAGTGAAGGTCCATACTATGTGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS CAA 72 bp | GTCTTGGAATTGGCAAGTGCTTTTACCAGTTCATATTaGGCATCCTTTGAAGCTTTGTCATGTTCCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLELASAFTSSY*ASFEALSCSTD Trigger: GTCTGTGGAACATGACAAAGCTTCAAAGGATGCCAAATATGAACTGGTAAAAGCACTTGCCAATTCCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028225.12 ENSMUST00000135575.2 |
||
| CDS CAA 72 bp | AACAATTATATTGGATATCTGGTCAATGACTCCTTCTaGAGCAAGGTATTGTCGTCCGTGATGGGTATAAGC | + |
|
Preference number: 6 (lower is better) Translates to: NNYIGYLVNDSF*SKVLSSVMGIS Trigger: GCTTATACCCATCACGGACGACAATACCTTGCTCAAGAAGGAGTCATTGACCAGATATCCAATATAATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||
| CDS TCA 72 bp | CAGCTCAGCATTATTGAGAATCTCAGTAACAGCTTCTaGATTTTCAACAATTCTTCCAATCTGCGACAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: QLSIIENLSNSF*IFNNSSNLRQS Trigger: ACTCTGTCGCAGATTGGAAGAATTGTTGAAAATTCAGAAGCTGTTACTGAGATTCTCAATAATGCTGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028225.12 |
||