Pregenerated sensors for PSMD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017221Ensembl transcript IDs: ENSMUST00000017365.15, ENSMUST00000123676.2
Found 129 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTCCGTCCCCTCCTGCCACCGACACCACCATGAGGCAGGACCCTaGCTCCTGGAGGCTGCCACCTCTCTCCCGCCCACAGGGTACTGT | + |
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Preference number: 1 (lower is better) Translates to: LSVPSCHRHHHEAGP*LLEAATSLPPTGYC Trigger: ACAGTACCCTGTGGGCGGGAGAGAGGTGGCAGCCTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGGACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR TCA 90 bp | CTAATCCATGGTTCTGTCCGTCCCCTCCTGCCACCGACACCACCATaGGGCAGGACCCTGCCTCCTGGAGGCTGCCACCTCTCTCCCGCC | + |
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Preference number: 1 (lower is better) Translates to: LIHGSVRPLLPPTPP*GRTLPPGGCHLSPA Trigger: GGCGGGAGAGAGGTGGCAGCCTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGGACAGAACCATGGATTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR CCA 90 bp | ACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATaGTTCTGTCCGTCCCCTCCTGCCACCGACACCACCATGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: TQRVPTPGPSPHPNP*FCPSPPATDTTMRQ Trigger: CTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGGACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR CCA 90 bp | CCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCCGTGTGTaGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: PASLTPAHMQSVSRV*ETENSFPGRGHLRE Trigger: TTCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR GCA 90 bp | ATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTaGACATATGCAGTCTGTGAGCCGTGTGTGGGAAACGGAGAACAG | + |
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Preference number: 1 (lower is better) Translates to: MVARRGRLAPSIPDP*TYAVCEPCVGNGEQ Trigger: CTGTTCTCCGTTTCCCACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTGCTACCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR-3UTR GCA 90 bp | CGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTCCGTCCCTGCCTCCTGGAGGCTaGCACCTCTCTCCCGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RVPTPGPSPHPNPWFCPSLPPGG*HLSPAH Trigger: GTGGGCGGGAGAGAGGTGGCAGCCTCCAGGAGGCAG...GGACGGACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR-3UTR TCA 90 bp | CCCGCCCACAGGGTACTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGGGCTCCCAGCATCCCTaGCCCCTGCACATATGCAGT | + |
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Preference number: 2 (lower is better) Translates to: PAHRVLSPATERHGSKKGGSQHP*PLHICS Trigger: ACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCC...CCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAGTACCCTGTGGGCGGG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR TCA 72 bp | GGTTCTGTCCGTCCCCTCCTGCCACCGACACCACCATaGGGCAGGACCCTGCCTCCTGGAGGCTGCCACCTC | + |
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Preference number: 3 (lower is better) Translates to: GSVRPLLPPTPP*GRTLPPGGCHL Trigger: GAGGTGGCAGCCTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGGACAGAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR GCA 72 bp | AGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTaGACATATGCAGTCTGTGAGCCGTGTGTGGGAAAC | + |
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Preference number: 3 (lower is better) Translates to: RRGRLAPSIPDP*TYAVCEPCVGN Trigger: GTTTCCCACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR CCA 72 bp | CTGACCCCTGCACATATGCAGTCTGTGAGCCGTGTGTaGGAAACGGAGAACAGTTTCCCGGGCAGGGGACAC | + |
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Preference number: 3 (lower is better) Translates to: LTPAHMQSVSRV*ETENSFPGRGH Trigger: GTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGACTGCATATGTGCAGGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | GCAGTCTGTGAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACAGTGGTTGAGGCGGCGTaGCGTGGACGGCAGCATCCG | + |
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Preference number: 4 (lower is better) Translates to: AVCEPCVGNGEQFPGQGTVVEAA*RGRQHP Trigger: CGGATGCTGCCGTCCACGTCACGCCGCCTCAACCAC...TGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | CTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGCGGTCGCAGCTGCCTTaGCGTCTCCCTCCCCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: LSPATERHGSKKGTVGSQRSQLP*RLPPPW Trigger: CCACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCG...CTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | GAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAAACTCCAGGTCCTGCTaGTCCCGCTCTCGCCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EPCVGNGEQFPGQGTPEGNSRSC*SRSRRS Trigger: GGAGCGGCGAGAGCGGGAGCAGCAGGACCTGGAGTT...TCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCTTCATCTCCACATCCTaGGGGGCCGGTGGCGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: GDGWLPASLTPAHMQSVSFISTS*GAGGGG Trigger: ACCGCCGCCACCGGCCCCCCAGGATGTGGAGATGAA...GCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | TGTGAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGAGGGCTGGCGGAACTaGAGGCGGTCTGGGATCTCC | + |
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Preference number: 4 (lower is better) Translates to: CEPCVGNGEQFPGQGTPEEGWRN*RRSGIS Trigger: GGAGATCCCAGACCGCCTGCAGTTCCGCCAGCCCTC...CTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAGAACTGCAGGCGGTCTaGGATCTCCCCCAGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: EPCVGNGEQFPGQGTPEGELQAV*DLPQQE Trigger: CTCCTGCTGGGGGAGATCCCAGACCGCCTGCAGTTC...TCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | CAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCCGCTTTAGGGAGGGCTaGCGGAACTGCAGGCGGTCT | + |
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Preference number: 4 (lower is better) Translates to: QRGMVARRGRLAPSIPDPRFREG*RNCRRS Trigger: AGACCGCCTGCAGTTCCGCCAGCCCTCCCTAAAGCG...GGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | TCCGTCCCCTCCTGCCACCGACACCACCATGAGGCAGGACCCTGCCTCCTGGAGTGTGCACCGTCTGTTTaGAGCCAACAGCTGTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: SVPSCHRHHHEAGPCLLECAPSV*SQQLCA Trigger: AGCACACAGCTGTTGGCTTCAAACAGACGGTGCACA...CTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | TTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCCGTGTGTGGCAAACTCCAGGTCCTaGTGCTCCCGCTCTCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: LAPSIPDPCTYAVCEPCVANSRS*CSRSRR Trigger: GCGGCGAGAGCGGGAGCAGCAGGACCTGGAGTTTGC...CACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCGTGTCCAGCTCTCTCTaGGAGTGCTCGGTCGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: GDGWLPASLTPAHMQSVSVSSSL*ECSVAA Trigger: AGCTGCGACCGAGCACTCCCAGAGAGAGCTGGACAC...GCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | CCGTCCCCTCCTGCCACCGACACCACCATGAGGCAGGACCCTGCCTCCTGGAGGAACAGCTGTGTGCTGTaGAGCCTTTCGAAGGGCATT | + |
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Preference number: 4 (lower is better) Translates to: PSPPATDTTMRQDPASWRNSCVL*SLSKGI Trigger: AATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTT...CCTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | CCCGCCCACAGGGTACTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGTCCAGCTGCAGCTTCTaGGCGATGTCGGCCAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PAHRVLSPATERHGSKKGSSCSF*AMSARE Trigger: CTCCCTGGCCGACATCGCCCAGAAGCTGCAGCTGGA...CCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAGTACCCTGTGGGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAAGGAGATGCGCTGGTaGAAGGCCAGCTGGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EGDGWLPASLTPAHMQSVKEMRW*KASWGS Trigger: GGAGCCCCAGCTGGCCTTCCACCAGCGCATCTCCTT...CACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GTCCCCTCCTGCCACCGACACCACCATGAGGCAGGACCCTGCCTCCTGGAGGCTCAGGGAACACAGACTTaGATACCAGCTTCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VPSCHRHHHEAGPCLLEAQGTQT*IPASQP Trigger: AGGCTGAGAAGCTGGTATCCAAGTCTGTGTTCCCTG...AGCCTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | CTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGGCCGCTCCCAGCTGCTaGCTCCTCTTTCATCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: LSPATERHGSKKGTVGSQAAPSC*LLFHLH Trigger: GTGGAGATGAAAGAGGAGGCAGCAGCTGGGAGCGGC...CTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | CATAGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGAGGCAGGAGAGGCGCTaGTGCCGCTTTTCCTGTGCG | + |
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Preference number: 4 (lower is better) Translates to: HRTQRVPTPGPSPHPNPWRQERR*CRFSCA Trigger: CGCACAGGAAAAGCGGCATCAGCGCCTCTCCTGCCT...CCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCTATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | GTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTCCGTCCCAGGGCTCGGCGGTTCTaGGTGCTGATCTTCTGCATC | + |
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Preference number: 4 (lower is better) Translates to: VSQLQALVHTLIHGSVRPRARRF*VLIFCI Trigger: GATGCAGAAGATCAGCACTCAGAACCGCCGAGCCCT...GGGACGGACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | AAACATAGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCACATCGTGCCGCAGGGTaGCTGTCCGGAGCCGGGCAT | + |
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Preference number: 4 (lower is better) Translates to: KHRTQRVPTPGPSPHPNPHRAAG*LSGAGH Trigger: ATGCCCGGCTCCGGACAGCCACCCTGCGGCACGATG...TGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCTATGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | AGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCCAGAAGGAGATGCGCTaGTGGAAGGCCAGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RTQRVPTPGPSPHPNPWFQKEMR*WKASWG Trigger: GCCCCAGCTGGCCTTCCACCAGCGCATCTCCTTCTG...GAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | CCCGCCCACAGGGTACTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGTGCGCACACCTGTCTTaGTCACATTGTGTCGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: PAHRVLSPATERHGSKKGCAHLS*SHCVAV Trigger: GACTGCGACACAATGTGATCAAGACAGGTGTGCGCA...CCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAGTACCCTGTGGGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| 3UTR CAA 72 bp | CAGCTACAGAGAGGCATGGTAGCAAGAAGGGGACGGTaGGCTCCCAGCATCCCTGACCCCTGCACATATGCA | + |
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Preference number: 4 (lower is better) Translates to: QLQRGMVARRGR*APSIPDPCTYA Trigger: TGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTGTAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | ACATATGCAGTCTGTGAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGACAGAACATAGTGGTTaGGGCGGCGTGACGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: TYAVCEPCVGNGEQFPGQTEHSG*GGVTWT Trigger: CGTCCACGTCACGCCGCCTCAACCACTATGTTCTGT...CTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGACTGCATATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | TTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCCGTGTGTGATCCCTTCTCGTGATTaGTGCTGGCCTCAATCACGC | + |
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Preference number: 4 (lower is better) Translates to: LAPSIPDPCTYAVCEPCVIPSRD*CWPQSR Trigger: GCGTGATTGAGGCCAGCATCAATCACGAGAAGGGAT...CACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | CATAGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTCTGGGCTATCCAGCTaGAGCTTCTGGGCGATGTCG | + |
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Preference number: 4 (lower is better) Translates to: HRTQRVPTPGPSPHPNPWSGLSS*SFWAMS Trigger: CGACATCGCCCAGAAGCTGCAGCTGGATAGCCCAGA...CCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | GTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAAAAGAGAAACTCTCGCCGCTCCTCTaGAGACTCCAGGTCCTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VGNGEQFPGQGTPEGKEKLSPLL*RLQVLV Trigger: AACAAGGACCTGGAGTCTGCAGAGGAGCGGCGAGAG...TTTCTCTTTTCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAGATAATAGTAACACTTaGCAGCTACGAGGTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EPCVGNGEQFPGQGTPEGDNSNT*QLRGPG Trigger: CCCTGGACCTCGTAGCTGCCAAGTGTTACTATTATC...TCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GCAGTCTGTGAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCCACTCATTGTTGTTaGCTTGCTCAGGGAACACAG | + |
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Preference number: 4 (lower is better) Translates to: AVCEPCVGNGEQFPGQGTPTHCC*LAQGTQ Trigger: CTGTGTTCCCTGAGCAAGCCAACAACAATGAGTGGG...TGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGACTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | TCCGTCCCCTCCTGCCACCGACACCACCATGAGGCAGGACCCTGCCTCCTGGAGTGTCAATCATCTCTTTaGATTGGACGTATCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SVPSCHRHHHEAGPCLLECQSSL*IGRIPS Trigger: AGAAGGGATACGTCCAATCCAAAGAGATGATTGACA...CTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | CATAGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTGGCCTTGGCGACAATaGACTCTGCATCTTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HRTQRVPTPGPSPHPNPWWPWRQ*TLHLLG Trigger: GCCCAGAAGATGCAGAGTTCATTGTCGCCAAGGCCA...CCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | CTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGACGTATCCCTTCTCGTaGTTGATGCTGGCCTCAATC | + |
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Preference number: 4 (lower is better) Translates to: LSPATERHGSKKGTVGSQTYPFS*LMLASI Trigger: GATTGAGGCCAGCATCAATCACGAGAAGGGATACGT...CTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | CTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGGGCGACAATGAACTCTaGATCTTCTGGGCTATCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSPATERHGSKKGTVGSQGDNEL*IFWAIQ Trigger: CTGGATAGCCCAGAAGATGCAGAGTTCATTGTCGCC...CTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | TTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCCGTGTGTGCGGCTTCTGTGTCCATaGGTTCTTCTAGGAAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: LAPSIPDPCTYAVCEPCVRLLCP*VLLGRV Trigger: TACCCTTCCTAGAAGAACCCATGGACACAGAAGCCG...CACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | CAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGTAATAGAGGTACCTaGCCCACTCATTGTTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: QRGMVARRGRLAPSIPDPCNRGT*PTHCCW Trigger: CCAACAACAATGAGTGGGCCAGGTACCTCTATTACA...GGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | GTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAAAAGAGAAAGGCGGTTCTGAGTGCTaGTCTTCTGCATCAGGTCAT | + |
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Preference number: 4 (lower is better) Translates to: VGNGEQFPGQGTPEGKEKGGSEC*SSASGH Trigger: ATGACCTGATGCAGAAGATCAGCACTCAGAACCGCC...TTTCTCTTTTCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | AGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCCCTTTCGAAGGGCATTaGTCATCGTTCTCCGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: RTQRVPTPGPSPHPNPWFPFEGH*SSFSGL Trigger: AAGCCCGGAGAACGATGACCAATGCCCTTCGAAAGG...GAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | CCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTCGAACTCTGCATCTTCTaGGCTATCCAGCTGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PNVSQLQALVHTLIHGSVELCIF*AIQLQL Trigger: AAGCTGCAGCTGGATAGCCCAGAAGATGCAGAGTTC...GACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | ACATATGCAGTCTGTGAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGCTGGGGCTCCCGGGTaGAATAGATGTCAATCATCT | + |
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Preference number: 4 (lower is better) Translates to: TYAVCEPCVGNGEQFPGQAGAPG*NRCQSS Trigger: AGATGATTGACATCTATTCCACCCGGGAGCCCCAGC...CTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGACTGCATATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR TCA 90 bp | GTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTCCGTCCCAACTTCTCCCCAAACTaGTCCAGAACTTGGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSQLQALVHTLIHGSVRPNFSPN*SRTWLN Trigger: GTTCAACCAAGTTCTGGATCAGTTTGGGGAGAAGTT...GGGACGGACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | CAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTTCATTGTTGTTGGCTTaGTCAGGGAACACAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEGDGWLPASLTPAHMQSSLLLA*SGNTDL Trigger: CAAGTCTGTGTTCCCTGAGCAAGCCAACAACAATGA...AGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CCA 90 bp | GTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTCCGTCCCTTGACAGACATGTTGTaGATGTCCAGACAGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VSQLQALVHTLIHGSVRPLTDML*MSRQKE Trigger: CTCCTTCTGTCTGGACATCCACAACATGTCTGTCAA...GGGACGGACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR GCA 90 bp | CCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTCATCAGAGATTTTCTGTaGCTCTTTGTAGCGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PNVSQLQALVHTLIHGSVIRDFL*LFVALA Trigger: AGCAAGCGCTACAAAGAGGCACAGAAAATCTCTGAT...GACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 90 bp | GGGGGCCGGTGGCGGCGGTTCTTGTTCCCCTCCCGGCGGCGGCTTTaGCTTGTCGGCGCCTCGGCGCCGCGCCGAGCCCTCCTGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGRWRRFLFPSRRRL*LVGASAPRRALLLH Trigger: ATGAAGCAGGAGGGCTCGGCGCGGCGCCGAGGCGCCGACAAGGCAAAGCCGCCGCCGGGAGGGGAACAAGAACCGCCGCCACCGGCCCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 90 bp | TCTGGGAGTGCTCGGTCGCAGCTGCCTTGCCGTCTCCCTCCCCCGTaGAGCCGCTCCCAGCTGCTGCCTCCTCTTTCATCTCCACATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SGSARSQLPCRLPPP*SRSQLLPPLSSPHP Trigger: AGGATGTGGAGATGAAAGAGGAGGCAGCAGCTGGGAGCGGCTCCACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 90 bp | CCCCCAGCAGGAGCTCTACCACGATCAGAAGCTTGTGCACCTGCATaGGGCGTGACAGGAGCACAGTGGGCGGGGCACATCCGTGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PPAGALPRSEACAPA*GVTGAQWAGHIRGQ Trigger: TTGCCCACGGATGTGCCCCGCCCACTGTGCTCCTGTCACGCCCCATGCAGGTGCACAAGCTTCTGATCGTGGTAGAGCTCCTGCTGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS TCA 90 bp | GAAGCCATGCACAGCCTTGTACAGAACATAGTGGTTGAGGCGGCGTaGCGTGGACGGCAGCATCCGCAGCGCCCTCAGCACGAACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: EAMHSLVQNIVVEAA*RGRQHPQRPQHEPR Trigger: CCTCGGTTCGTGCTGAGGGCGCTGCGGATGCTGCCGTCCACGTCACGCCGCCTCAACCACTATGTTCTGTACAAGGCTGTGCATGGCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS TCA 90 bp | CAGGAGCTCTACCACGATCAGAAGCTTGTGCACCTGCATGGGGCGTaGCAGGAGCACAGTGGGCGGGGCACATCCGTGGGCAAGGGAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QELYHDQKLVHLHGA*QEHSGRGTSVGKGK Trigger: TTTTCCCTTGCCCACGGATGTGCCCCGCCCACTGTGCTCCTGTCACGCCCCATGCAGGTGCACAAGCTTCTGATCGTGGTAGAGCTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS GCA 90 bp | TCTTTGATGTCTTCTAAGGTGACAGTGTCCAGCTCTCTCTGGGAGTaGTCGGTCGCAGCTGCCTTGCCGTCTCCCTCCCCCGTGGAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SLMSSKVTVSSSLWE*SVAAALPSPSPVEP Trigger: CGGCTCCACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGGACACTGTCACCTTAGAAGACATCAAAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 90 bp | CACGCCGTCCCGGATGGCCTTGGCGACAATGAACTCTGCATCTTCTaGGCTATCCAGCTGCAGCTTCTGGGCGATGTCGGCCAGGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: HAVPDGLGDNELCIF*AIQLQLLGDVGQGD Trigger: ATCTCCCTGGCCGACATCGCCCAGAAGCTGCAGCTGGATAGCCCAGAAGATGCAGAGTTCATTGTCGCCAAGGCCATCCGGGACGGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 90 bp | ACGTGCTCTTTGATGTCTTCTAAGGTGACAGTGTCCAGCTCTCTCTaGGAGTGCTCGGTCGCAGCTGCCTTGCCGTCTCCCTCCCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCSLMSSKVTVSSSL*ECSVAAALPSPSPV Trigger: CACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGGACACTGTCACCTTAGAAGACATCAAAGAGCACGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | CCCGCCCACAGGGTACTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGGCCTTTCGAAGGGCATaGGTCATCGTTCTCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAHRVLSPATERHGSKKGAFRRA*VIVLRA Trigger: AGCCCGGAGAACGATGACCAATGCCCTTCGAAAGGC...CCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAGTACCCTGTGGGCGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | CAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTTCCTCCGCCATCTCCTaGGCAAACTCCAGGTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QEGDGWLPASLTPAHMQSSSAIS*ANSRSC Trigger: GCAGGACCTGGAGTTTGCCAAGGAGATGGCGGAGGA...AGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | GCAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTCTCGAGTGGCGTTATaGGAGGTGAAGAAGCCATGC | + |
|
Preference number: 5 (lower is better) Translates to: ARRGRLAPSIPDPCTYAVSRVAL*EVKKPC Trigger: GCATGGCTTCTTCACCTCCAATAACGCCACTCGAGA...GACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | CTGTCACCAGCTACAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGCTGGCCCACTCATTGTaGTTGGCTTGCTCAGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LSPATERHGSKKGTVGSQLAHSL*LACSGN Trigger: GTTCCCTGAGCAAGCCAACAACAATGAGTGGGCCAG...CTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTGTAGCTGGTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | TCCGTCCCCTCCTGCCACCGACACCACCATGAGGCAGGACCCTGCCTCCTGGAGATGTCAATCATCTCTTaGGATTGGACGTATCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVPSCHRHHHEAGPCLLEMSIIS*DWTYPF Trigger: GAAGGGATACGTCCAATCCAAAGAGATGATTGACAT...CTCCAGGAGGCAGGGTCCTGCCTCATGGTGGTGTCGGTGGCAGGAGGGGACGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | GCAGTCTGTGAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACAGGAAAGCGCATGGCCTaGACAGACATGTTGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AVCEPCVGNGEQFPGQGTGKRMA*TDMLWM Trigger: CATCCACAACATGTCTGTCAAGGCCATGCGCTTTCC...TGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGACTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 90 bp | AACGGTGCCTGGGCTCGTCTGTTTGAAGCCAACAGCTGTGTGCTGTaGAGCCTTTCGAAGGGCATTGGTCATCGTTCTCCGGGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NGAWARLFEANSCVL*SLSKGIGHRSPGFR Trigger: TCTGAAGCCCGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACAGACGAGCCCAGGCACCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS-3UTR CAA 90 bp | GTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAAAAGAGAAAACGAACCGAGGCTCCTaGCCGGAAACAGCCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VGNGEQFPGQGTPEGKEKTNRGS*PETAFS Trigger: AGAGAAGGCTGTTTCCGGCAAGGAGCCTCGGTTCGT...TTTCTCTTTTCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | TTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCCGTGTGTGTTGTGCACCGTCTGTTaGAAGCCAACAGCTGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LAPSIPDPCTYAVCEPCVLCTVC*KPTAVC Trigger: GCACACAGCTGTTGGCTTCAAACAGACGGTGCACAA...CACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | TCTGTGAGCCGTGTGTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGATGCGCACACCTGTCTaGATCACATTGTGTCGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SVSRVWETENSFPGRGHLMRTPV*ITLCRS Trigger: ACTGCGACACAATGTGATCAAGACAGGTGTGCGCAT...CAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCACACACGGCTCACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | ACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTTACCTGGCCCACTCATaGTTGTTGGCTTGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQRVPTPGPSPHPNPWFCYLAHS*LLACSG Trigger: CCCTGAGCAAGCCAACAACAATGAGTGGGCCAGGTA...ACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | CAGAGAGGCATGGTAGCAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCAATCATCTCTTTGGATaGGACGTATCCCTTCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QRGMVARRGRLAPSIPDPNHLFG*DVSLLV Trigger: CACGAGAAGGGATACGTCCAATCCAAAGAGATGATT...GGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTGCTACCATGCCTCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 90 bp | ACGATCAGAAGCTTGTGCACCGTCTGTTTGAAGCCAACAGCTGTGTaGTGTGGAGCCTTTCGAAGGGCATTGGTCATCGTTCTCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: TIRSLCTVCLKPTAV*CGAFRRALVIVLRA Trigger: AGCCCGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACAGACGGTGCACAAGCTTCTGATCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 90 bp | CAGAAGCTTGTGCACCGTCTGTTTGAAGCCAACAGCTGTGTGCTGTaGAGCCTTTCGAAGGGCATTGGTCATCGTTCTCCGGGCTTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QKLVHRLFEANSCVL*SLSKGIGHRSPGFR Trigger: TCTGAAGCCCGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACAGACGGTGCACAAGCTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 90 bp | GACAGAAGGAGATGCGCTGGTGGAAGGCCAGCTGGGGCTCCCGGGTaGAATAGATGTCAATCATCTCTTTGGATTGGACGTATCCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DRRRCAGGRPAGAPG*NRCQSSLWIGRIPS Trigger: AGAAGGGATACGTCCAATCCAAAGAGATGATTGACATCTATTCCACCCGGGAGCCCCAGCTGGCCTTCCACCAGCGCATCTCCTTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | GCAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTCTCACGTGCTCTTaGATGTCTTCTAAGGTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ARRGRLAPSIPDPCTYAVCLTCS*MSSKVT Trigger: TGTCACCTTAGAAGACATCAAAGAGCACGTGAGACA...GACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | AGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTCAGGGAACACAGACTaGGATACCAGCTTCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RTQRVPTPGPSPHPNPWFSGNTD*DTSFSA Trigger: GGCTGAGAAGCTGGTATCCAAGTCTGTGTTCCCTGA...GAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | TTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTGTGAGCCGTGTGTGCTCATTGTTGTTGGCTaGCTCAGGGAACACAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LAPSIPDPCTYAVCEPCVLIVVG*LREHRL Trigger: AAGTCTGTGTTCCCTGAGCAAGCCAACAACAATGAG...CACACACGGCTCACAGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | CATAGAACCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGGCCCACTCATTGTTGTaGGCTTGCTCAGGGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: HRTQRVPTPGPSPHPNPWAHSLL*ACSGNT Trigger: TGTGTTCCCTGAGCAAGCCAACAACAATGAGTGGGC...CCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGGTTCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | CCCAACGTGTCCCAACTCCAGGCCCTAGTCCACACCCTAATCCATGGTTCTGTCGCCTTGACAGACATGTaGTGGATGTCCAGACAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PNVSQLQALVHTLIHGSVALTDM*WMSRQK Trigger: CTTCTGTCTGGACATCCACAACATGTCTGTCAAGGC...GACAGAACCATGGATTAGGGTGTGGACTAGGGCCTGGAGTTGGGACACGTTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | GTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAAAAGAGAAAGTAGGTCCCATCCGTTaGAAACTTCTCCCCAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: VGNGEQFPGQGTPEGKEKVGPIR*KLLPKL Trigger: CAGTTTGGGGAGAAGTTTCAAACGGATGGGACCTAC...TTTCTCTTTTCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS TCA 90 bp | AGATGTCAATCATCTCTTTGGATTGGACGTATCCCTTCTCGTGATTaGTGCTGGCCTCAATCACGCCGTCCCGGATGGCCTTGGCGACAA | + |
|
Preference number: 5 (lower is better) Translates to: RCQSSLWIGRIPSRD*CWPQSRRPGWPWRQ Trigger: TTGTCGCCAAGGCCATCCGGGACGGCGTGATTGAGGCCAGCATCAATCACGAGAAGGGATACGTCCAATCCAAAGAGATGATTGACATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | CAAGAAGGGGACGGTTGGCTCCCAGCATCCCTGACCCCTGCACATATGCAGTCTAAACTGATCCAGAACTaGGTTGAACTTGGCAAGATT | + |
|
Preference number: 5 (lower is better) Translates to: QEGDGWLPASLTPAHMQSKLIQN*VELGKI Trigger: AATCTTGCCAAGTTCAACCAAGTTCTGGATCAGTTT...AGACTGCATATGTGCAGGGGTCAGGGATGCTGGGAGCCAACCGTCCCCTTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS-3UTR CAA 90 bp | GTGGGAAACGGAGAACAGTTTCCCGGGCAGGGGACACCTGAGGGAAAAGAGAAAAGAACTTGGTTGAACTaGGCAAGATTTCCTGTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: VGNGEQFPGQGTPEGKEKRTWLN*ARFPVL Trigger: TAGGACAGGAAATCTTGCCAAGTTCAACCAAGTTCT...TTTCTCTTTTCCCTCAGGTGTCCCCTGCCCGGGAAACTGTTCTCCGTTTCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | GTGGCGGCGGTTCTTGTTCCCCTCCCGGCGGCGGCTTaGCCTTGTCGGCGCCTCGGCGCCGCGCCGAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: VAAVLVPLPAAA*PCRRLGAAPSP Trigger: AGGGCTCGGCGCGGCGCCGAGGCGCCGACAAGGCAAAGCCGCCGCCGGGAGGGGAACAAGAACCGCCGCCAC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | CCAGCTCTCTCTGGGAGTGCTCGGTCGCAGCTGCCTTaGCGTCTCCCTCCCCCGTGGAGCCGCTCCCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PALSGSARSQLP*RLPPPWSRSQL Trigger: CAGCTGGGAGCGGCTCCACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 90 bp | GTGACAGTGTCCAGCTCTCTCTGGGAGTGCTCGGTCGCAGCTGCCTaGCCGTCTCCCTCCCCCGTGGAGCCGCTCCCAGCTGCTGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTVSSSLWECSVAAA*PSPSPVEPLPAAAS Trigger: GGAGGCAGCAGCTGGGAGCGGCTCCACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGGACACTGTCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | AGTGTCCAGCTCTCTCTGGGAGTGCTCGGTCGCAGCTaGCTTGCCGTCTCCCTCCCCCGTGGAGCCGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SVQLSLGVLGRS*LAVSLPRGAAP Trigger: GGGAGCGGCTCCACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGGACACT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | TCCAGCTCTCTCTGGGAGTGCTCGGTCGCAGCTGCCTaGCCGTCTCCCTCCCCCGTGGAGCCGCTCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSLWECSVAAA*PSPSPVEPLPA Trigger: AGCTGGGAGCGGCTCCACGGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
||
| CDS GCA 72 bp | GGCATGAGGGAGCGCTTTAGGGAGGGCTGGCGGAACTaGAGGCGGTCTGGGATCTCCCCCAGCAGGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GMRERFREGWRN*RRSGISPSRSS Trigger: AGAGCTCCTGCTGGGGGAGATCCCAGACCGCCTGCAGTTCCGCCAGCCCTCCCTAAAGCGCTCCCTCATGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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| CDS GCA 72 bp | TCATCCTCCGCCATCTCCTTGGCAAACTCCAGGTCCTaGTGCTCCCGCTCTCGCCGCTCCTCTGCAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSAISLANSRS*CSRSRRSSADS Trigger: GGAGTCTGCAGAGGAGCGGCGAGAGCGGGAGCAGCAGGACCTGGAGTTTGCCAAGGAGATGGCGGAGGATGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | CAGGGGAAGCTGTCGTCGTCATCCTCCGCCATCTCCTaGGCAAACTCCAGGTCCTGCTGCTCCCGCTCTCGC | + |
|
Preference number: 6 (lower is better) Translates to: QGKLSSSSSAIS*ANSRSCCSRSR Trigger: GCGAGAGCGGGAGCAGCAGGACCTGGAGTTTGCCAAGGAGATGGCGGAGGATGACGACGACAGCTTCCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS TCA 72 bp | CACAGCCTTGTACAGAACATAGTGGTTGAGGCGGCGTaGCGTGGACGGCAGCATCCGCAGCGCCCTCAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HSLVQNIVVEAA*RGRQHPQRPQH Trigger: GTGCTGAGGGCGCTGCGGATGCTGCCGTCCACGTCACGCCGCCTCAACCACTATGTTCTGTACAAGGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | TCTTCTAAGGTGACAGTGTCCAGCTCTCTCTGGGAGTaGTCGGTCGCAGCTGCCTTGCCGTCTCCCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSKVTVSSSLWE*SVAAALPSPSP Trigger: GGGGGAGGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGGACACTGTCACCTTAGAAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | GCATCCGCAGCGCCCTCAGCACGAACCGAGGCTCCTTaGCGGAAACAGCCTTCTCTAGCTGTCTCACGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ASAAPSARTEAP*RKQPSLAVSRA Trigger: AGCACGTGAGACAGCTAGAGAAGGCTGTTTCCGGCAAGGAGCCTCGGTTCGTGCTGAGGGCGCTGCGGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | CTCCAGGTCCTGCTGCTCCCGCTCTCGCCGCTCCTCTaGAGACTCCAGGTCCTTGTTGTAGGATTTGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQVLLLPLSPLL*RLQVLVVGFGR Trigger: CCTCCCAAATCCTACAACAAGGACCTGGAGTCTGCAGAGGAGCGGCGAGAGCGGGAGCAGCAGGACCTGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | AGCAGGAGCTCTACCACGATCAGAAGCTTGTGCACCTaGATGGGGCGTGACAGGAGCACAGTGGGCGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: SRSSTTIRSLCT*MGRDRSTVGGA Trigger: TGCCCCGCCCACTGTGCTCCTGTCACGCCCCATGCAGGTGCACAAGCTTCTGATCGTGGTAGAGCTCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS CCA 72 bp | GGAGCTCTACCACGATCAGAAGCTTGTGCACCTGCATaGGGCGTGACAGGAGCACAGTGGGCGGGGCACATC | + |
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Preference number: 6 (lower is better) Translates to: GALPRSEACAPA*GVTGAQWAGHI Trigger: GATGTGCCCCGCCCACTGTGCTCCTGTCACGCCCCATGCAGGTGCACAAGCTTCTGATCGTGGTAGAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS CAA 72 bp | AGCATCCGCAGCGCCCTCAGCACGAACCGAGGCTCCTaGCCGGAAACAGCCTTCTCTAGCTGTCTCACGTGC | + |
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Preference number: 6 (lower is better) Translates to: SIRSALSTNRGS*PETAFSSCLTC Trigger: GCACGTGAGACAGCTAGAGAAGGCTGTTTCCGGCAAGGAGCCTCGGTTCGTGCTGAGGGCGCTGCGGATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 90 bp | GTGGACGGCAGCATCCGCAGCGCCCTCAGCACGAACCGAGGCTCCTaGCCGGAAACAGCCTTCTCTAGCTGTCTCACGTGCTCTTTGATG | + |
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Preference number: 6 (lower is better) Translates to: VDGSIRSALSTNRGS*PETAFSSCLTCSLM Trigger: CATCAAAGAGCACGTGAGACAGCTAGAGAAGGCTGTTTCCGGCAAGGAGCCTCGGTTCGTGCTGAGGGCGCTGCGGATGCTGCCGTCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | CACGCCGTCCCGGATGGCCTTGGCGACAATGAACTCTaGATCTTCTGGGCTATCCAGCTGCAGCTTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: HAVPDGLGDNEL*IFWAIQLQLLG Trigger: GCCCAGAAGCTGCAGCTGGATAGCCCAGAAGATGCAGAGTTCATTGTCGCCAAGGCCATCCGGGACGGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS TCA 72 bp | AGAAGCCATGCACAGCCTTGTACAGAACATAGTGGTTaGGGCGGCGTGACGTGGACGGCAGCATCCGCAGCG | + |
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Preference number: 6 (lower is better) Translates to: RSHAQPCTEHSG*GGVTWTAASAA Trigger: CGCTGCGGATGCTGCCGTCCACGTCACGCCGCCTCAACCACTATGTTCTGTACAAGGCTGTGCATGGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | GCGACAATGAACTCTGCATCTTCTGGGCTATCCAGCTaGAGCTTCTGGGCGATGTCGGCCAGGGAGATCCGG | + |
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Preference number: 6 (lower is better) Translates to: ATMNSASSGLSS*SFWAMSAREIR Trigger: CCGGATCTCCCTGGCCGACATCGCCCAGAAGCTGCAGCTGGATAGCCCAGAAGATGCAGAGTTCATTGTCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 72 bp | CCGGATGGCCTTGGCGACAATGAACTCTGCATCTTCTaGGCTATCCAGCTGCAGCTTCTGGGCGATGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: PDGLGDNELCIF*AIQLQLLGDVG Trigger: GCCGACATCGCCCAGAAGCTGCAGCTGGATAGCCCAGAAGATGCAGAGTTCATTGTCGCCAAGGCCATCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | ATCTCCCCCAGCAGGAGCTCTACCACGATCAGAAGCTaGTGCACCTGCATGGGGCGTGACAGGAGCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: ISPSRSSTTIRS*CTCMGRDRSTV Trigger: CACTGTGCTCCTGTCACGCCCCATGCAGGTGCACAAGCTTCTGATCGTGGTAGAGCTCCTGCTGGGGGAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS GCA 72 bp | GGCGCTGATGCCGCTTTTCCTGTGCGAGGACGAAACTaGAGGTCGGCTTCTGTGTCCATGGGTTCTTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: GADAAFPVRGRN*RSASVSMGSSR Trigger: CCTAGAAGAACCCATGGACACAGAAGCCGACCTGCAGTTTCGTCCTCGCACAGGAAAAGCGGCATCAGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 72 bp | TTGATGTCTTCTAAGGTGACAGTGTCCAGCTCTCTCTaGGAGTGCTCGGTCGCAGCTGCCTTGCCGTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LMSSKVTVSSSL*ECSVAAALPSP Trigger: GGGAGACGGCAAGGCAGCTGCGACCGAGCACTCCCAGAGAGAGCTGGACACTGTCACCTTAGAAGACATCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 72 bp | GGAACTCATAGACCCGGGCGTGATAATAGTAACACTTaGCAGCTACGAGGTCCAGGGCTCGGCGGTTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: GTHRPGRDNSNT*QLRGPGLGGSE Trigger: CTCAGAACCGCCGAGCCCTGGACCTCGTAGCTGCCAAGTGTTACTATTATCACGCCCGGGTCTATGAGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | CCAACAGCTGTGTGCTGTGGAGCCTTTCGAAGGGCATaGGTCATCGTTCTCCGGGCTTCAGAGTACTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: PTAVCCGAFRRA*VIVLRASEYSS Trigger: GCTGGAGTACTCTGAAGCCCGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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| CDS TCA 72 bp | CACTTGGCAGCTACGAGGTCCAGGGCTCGGCGGTTCTaGGTGCTGATCTTCTGCATCAGGTCATCAGAGATT | + |
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Preference number: 6 (lower is better) Translates to: HLAATRSRARRF*VLIFCIRSSEI Trigger: AATCTCTGATGACCTGATGCAGAAGATCAGCACTCAGAACCGCCGAGCCCTGGACCTCGTAGCTGCCAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | TCCCCCAGCAGGAGCTCTACCACGATCAGAAGCTTGTaGACCGTCTGTTTGAAGCCAACAGCTGTGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SPSRSSTTIRSL*TVCLKPTAVCC Trigger: ACAGCACACAGCTGTTGGCTTCAAACAGACGGTGCACAAGCTTCTGATCGTGGTAGAGCTCCTGCTGGGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | GTGCCTGGGCTCGTCTGTTTGAAGCCAACAGCTGTGTaGTGTGGAGCCTTTCGAAGGGCATTGGTCATCGTT | + |
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Preference number: 6 (lower is better) Translates to: VPGLVCLKPTAV*CGAFRRALVIV Trigger: AACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACAGACGAGCCCAGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS CCA 72 bp | CAACAGCTGTGTGCTGTGGAGCCTTTCGAAGGGCATTaGTCATCGTTCTCCGGGCTTCAGAGTACTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: QQLCAVEPFEGH*SSFSGLQSTPA Trigger: AGCTGGAGTACTCTGAAGCCCGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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| CDS CCA 72 bp | GTGCACCGTCTGTTTGAAGCCAACAGCTGTGTGCTGTaGAGCCTTTCGAAGGGCATTGGTCATCGTTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: VHRLFEANSCVL*SLSKGIGHRSP Trigger: CGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACAGACGGTGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 72 bp | AGATGCGCTGGTGGAAGGCCAGCTGGGGCTCCCGGGTaGAATAGATGTCAATCATCTCTTTGGATTGGACGT | + |
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Preference number: 6 (lower is better) Translates to: RCAGGRPAGAPG*NRCQSSLWIGR Trigger: ACGTCCAATCCAAAGAGATGATTGACATCTATTCCACCCGGGAGCCCCAGCTGGCCTTCCACCAGCGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 72 bp | TGGGCTCGTCTGTTTGAAGCCAACAGCTGTGTGCTGTaGAGCCTTTCGAAGGGCATTGGTCATCGTTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: WARLFEANSCVL*SLSKGIGHRSP Trigger: CGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACAGACGAGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123676.2 |
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| CDS CAA 90 bp | TGTTTGAAGCCAACAGCTGTGTGCTGTGGAGCCTTTCGAAGGGCATaGGTCATCGTTCTCCGGGCTTCAGAGTACTCCAGCTGGATAGCC | + |
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Preference number: 6 (lower is better) Translates to: CLKPTAVCCGAFRRA*VIVLRASEYSSWIA Trigger: GGCTATCCAGCTGGAGTACTCTGAAGCCCGGAGAACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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| CDS TCA 72 bp | TCATCTCTTTGGATTGGACGTATCCCTTCTCGTGATTaGTGCTGGCCTCAATCACGCCGTCCCGGATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: SSLWIGRIPSRD*CWPQSRRPGWP Trigger: AGGCCATCCGGGACGGCGTGATTGAGGCCAGCATCAATCACGAGAAGGGATACGTCCAATCCAAAGAGATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CCA 72 bp | TGCGAGGACGAAACTGCAGGTCGGCTTCTGTGTCCATaGGTTCTTCTAGGAAGGGTAGCAAGAAGTCTCGAG | + |
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Preference number: 6 (lower is better) Translates to: CEDETAGRLLCP*VLLGRVARSLE Trigger: CTCGAGACTTCTTGCTACCCTTCCTAGAAGAACCCATGGACACAGAAGCCGACCTGCAGTTTCGTCCTCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 90 bp | TCGCCCTGTGTAATAGAGGTACCTGGCCCACTCATTGTTGTTGGCTaGCTCAGGGAACACAGACTTGGATACCAGCTTCTCAGCCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: SPCVIEVPGPLIVVG*LREHRLGYQLLSLV Trigger: GACCAGGCTGAGAAGCTGGTATCCAAGTCTGTGTTCCCTGAGCAAGCCAACAACAATGAGTGGGCCAGGTACCTCTATTACACAGGGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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| CDS CAA 90 bp | CAGCTGGGGCTCCCGGGTGGAATAGATGTCAATCATCTCTTTGGATaGGACGTATCCCTTCTCGTGATTGATGCTGGCCTCAATCACGCC | + |
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Preference number: 6 (lower is better) Translates to: QLGLPGGIDVNHLFG*DVSLLVIDAGLNHA Trigger: GGCGTGATTGAGGCCAGCATCAATCACGAGAAGGGATACGTCCAATCCAAAGAGATGATTGACATCTATTCCACCCGGGAGCCCCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | AGCTTGTGCACCGTCTGTTTGAAGCCAACAGCTGTGTaGTGTGGAGCCTTTCGAAGGGCATTGGTCATCGTT | + |
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Preference number: 6 (lower is better) Translates to: SLCTVCLKPTAV*CGAFRRALVIV Trigger: AACGATGACCAATGCCCTTCGAAAGGCTCCACAGCACACAGCTGTTGGCTTCAAACAGACGGTGCACAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS TCA 72 bp | TCAATCATCTCTTTGGATTGGACGTATCCCTTCTCGTaGTTGATGCTGGCCTCAATCACGCCGTCCCGGATG | + |
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Preference number: 6 (lower is better) Translates to: SIISLDWTYPFS*LMLASITPSRM Trigger: CATCCGGGACGGCGTGATTGAGGCCAGCATCAATCACGAGAAGGGATACGTCCAATCCAAAGAGATGATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS GCA 72 bp | TCCTTGCCGGAAACAGCCTTCTCTAGCTGTCTCACGTaGTCTTTGATGTCTTCTAAGGTGACAGTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SLPETAFSSCLT*SLMSSKVTVSS Trigger: GCTGGACACTGTCACCTTAGAAGACATCAAAGAGCACGTGAGACAGCTAGAGAAGGCTGTTTCCGGCAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | CCGGAAACAGCCTTCTCTAGCTGTCTCACGTGCTCTTaGATGTCTTCTAAGGTGACAGTGTCCAGCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PETAFSSCLTCS*MSSKVTVSSSL Trigger: GAGAGAGCTGGACACTGTCACCTTAGAAGACATCAAAGAGCACGTGAGACAGCTAGAGAAGGCTGTTTCCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | CTCCCGGGTGGAATAGATGTCAATCATCTCTTTGGATaGGACGTATCCCTTCTCGTGATTGATGCTGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: LPGGIDVNHLFG*DVSLLVIDAGL Trigger: GAGGCCAGCATCAATCACGAGAAGGGATACGTCCAATCCAAAGAGATGATTGACATCTATTCCACCCGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 90 bp | CACATTGTGTCGCAGTCGGATAATCAGGGTGTAGGTCCCATCCGTTaGAAACTTCTCCCCAAACTGATCCAGAACTTGGTTGAACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: HIVSQSDNQGVGPIR*KLLPKLIQNLVELG Trigger: GCCAAGTTCAACCAAGTTCTGGATCAGTTTGGGGAGAAGTTTCAAACGGATGGGACCTACACCCTGATTATCCGACTGCGACACAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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| CDS TCA 72 bp | AGGGTAGCAAGAAGTCTCGAGTGGCGTTATTGGAGGTaGAGAAGCCATGCACAGCCTTGTACAGAACATAGT | + |
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Preference number: 6 (lower is better) Translates to: RVARSLEWRYWR*RSHAQPCTEHS Trigger: ACTATGTTCTGTACAAGGCTGTGCATGGCTTCTTCACCTCCAATAACGCCACTCGAGACTTCTTGCTACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017365.15 |
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| CDS CAA 72 bp | TCGCAGTCGGATAATCAGGGTGTAGGTCCCATCCGTTaGAAACTTCTCCCCAAACTGATCCAGAACTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: SQSDNQGVGPIR*KLLPKLIQNLV Trigger: AACCAAGTTCTGGATCAGTTTGGGGAGAAGTTTCAAACGGATGGGACCTACACCCTGATTATCCGACTGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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| CDS CAA 90 bp | GTAGGTCCCATCCGTTTGAAACTTCTCCCCAAACTGATCCAGAACTaGGTTGAACTTGGCAAGATTTCCTGTCCTAACAGCTTGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: VGPIRLKLLPKLIQN*VELGKISCPNSLGE Trigger: CTCACCCAAGCTGTTAGGACAGGAAATCTTGCCAAGTTCAACCAAGTTCTGGATCAGTTTGGGGAGAAGTTTCAAACGGATGGGACCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017365.15 ENSMUST00000123676.2 |
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