Pregenerated sensors for PSMD14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026914Ensembl transcript IDs: ENSMUST00000028278.14
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACTTTGGAATCTGCAAAACCCGGACAAAATAAACAGAAGCGAGTaGACAACTGAGATGGGAGGTGGCACAGGTGTCTCACACATCACC | + |
|
Preference number: 1 (lower is better) Translates to: QLWNLQNPDKINRSE*TTEMGGGTGVSHIT Trigger: GGTGATGTGTGAGACACCTGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTCTGTTTATTTTGTCCGGGTTTTGCAGATTCCAAAGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| 3UTR CCA 72 bp | CACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTaGGAACGAAGAAGGACGATACACTCAGAGCGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HQITFSSLNCEH*ERRRTIHSERH Trigger: GTGGCGCTCTGAGTGTATCGTCCTTCTTCGTTCCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| 3UTR TCA 72 bp | AAACCCGGACAAAATAAACAGAAGCGAGTGCACAACTaGGATGGGAGGTGGCACAGGTGTCTCACACATCAC | + |
|
Preference number: 3 (lower is better) Translates to: KPGQNKQKRVHN*DGRWHRCLTHH Trigger: GTGATGTGTGAGACACCTGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTCTGTTTATTTTGTCCGGGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| 3UTR GCA 72 bp | AATCTGCAAAACCCGGACAAAATAAACAGAAGCGAGTaGACAACTGAGATGGGAGGTGGCACAGGTGTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: NLQNPDKINRSE*TTEMGGGTGVS Trigger: TGAGACACCTGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTCTGTTTATTTTGTCCGGGTTTTGCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CCA 90 bp | GGTGGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGGAGCATCTGTAGGTaGGCCCTGGCCCAGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGTGVSHITRSPSVPLTVRSICR*ALAQSR Trigger: CCTGGACTGGGCCAGGGCCCACCTACAGATGCTCCT...CACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR TCA 90 bp | AGAAGCGAGTGCACAACTGAGATGGGAGGTGGCACAGGTGTCTCACACATCACCGCTTCAAAGCTCTGCTaGGTGTTGATATCCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: RSECTTEMGGGTGVSHITASKLC*VLISTP Trigger: TGGTGTGGATATCAACACTCAGCAGAGCTTTGAAGC...GGTGATGTGTGAGACACCTGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR GCA 90 bp | AGAAGCGAGTGCACAACTGAGATGGGAGGTGGCACAGGTGTCTCACACATCACCGATATAAACTTGTTCTaGTGTGTCCACGGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RSECTTEMGGGTGVSHITDINLF*CVHGRS Trigger: GCTCCTGCCGTGGACACAGCAGAACAAGTTTATATC...GGTGATGTGTGAGACACCTGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR GCA 90 bp | AGGTGGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGGGATCCACAACCACTaGCACAGCTCTCTCCGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RWHRCLTHHQITFSSLNCGIHNH*HSSLRQ Trigger: TTGTCGGAGAGAGCTGTGGCAGTGGTTGTGGATCCC...ACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CCA 90 bp | CACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGAACGAAGAATCTGTAGGTGGGCCCTaGCCCAGTCCAGGCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: HITRSPSVPLTVSIGNEESVGGP*PSPGIP Trigger: AGGTATGCCTGGACTGGGCCAGGGCCCACCTACAGA...TTCTTCGTTCCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR TCA 90 bp | GGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCACTGACACCAGTTCCTaGCTGTGGCATAGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTGVSHITRSPSVPLTVSTDTSS*LWHSKH Trigger: GTGTTTGCTATGCCACAGTCAGGAACTGGTGTCAGT...GCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR GCA 90 bp | GAAGCGAGTGCACAACTGAGATGGGAGGTGGCACAGGTGTCTCACACATCACCAAACAGTATCCAACATTaGGGCCAAACACTGGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: EASAQLRWEVAQVSHTSPNSIQH*GQTLDN Trigger: ATTGTCCAGTGTTTGGCCGCAATGTTGGATACTGTT...TGGTGATGTGTGAGACACCTGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR TCA 90 bp | GTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGAACAGCTCTGCTGAGTGTTaGTATCCACACCAGAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSHITRSPSVPLTVSIGNSSAEC*YPHQKA Trigger: GGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCT...GTTCCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGCCAACATTCTTTATTaGCAGCTGTTCAGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GGGTGVSHITRSPSVPLTANILY*QLFRCH Trigger: ATGACACCTGAACAGCTGGCAATAAAGAATGTTGGC...AGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCCACCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTTTTGGCTTGGAACACTaGATCAACTGCTTCAACACT | + |
|
Preference number: 4 (lower is better) Translates to: GGGTGVSHITRSPSVPLTFGLEH*INCFNT Trigger: AGTGTTGAAGCAGTTGATCCAGTGTTCCAAGCCAAA...AGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCCACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CCA 90 bp | GGAGGTGGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTTCCAACATTTTGGCTTaGAACACTGGATCAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GGGTGVSHITRSPSVPLTSNILA*NTGSTA Trigger: AGCAGTTGATCCAGTGTTCCAAGCCAAAATGTTGGA...AGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCCACCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGCTTCCAAATGACGTTTaGGATCCTGCTTGCCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: GVSHITRSPSVPLTVSIGLPNDV*DPACQH Trigger: ATGTTGGCAAGCAGGATCCCAAACGTCATTTGGAAG...CCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGCGAGTGCACAACTGAGATGGGAGGTGGCACAGGTGTCTCACACATCACCATTGCGGCCAAACACTaGACAATATTTGAAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RSECTTEMGGGTGVSHITIAAKH*TIFEVI Trigger: TATGACTTCAAATATTGTCCAGTGTTTGGCCGCAAT...GGTGATGTGTGAGACACCTGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR GCA 90 bp | AGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGAACACTGGATCAACTaGTTCAACACTGACACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCLTHHQITFSSLNCEHWEHWIN*FNTDTS Trigger: ACTGGTGTCAGTGTTGAAGCAGTTGATCCAGTGTTC...CCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR TCA 90 bp | GGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGACACTGGACAATATTTaGAGTCATAAGCACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GVSHITRSPSVPLTVSIGTLDNI*SHKHIH Trigger: GTGGATGTGCTTATGACTTCAAATATTGTCCAGTGT...CCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CCA 90 bp | AACCCGGACAAAATAAACAGAAGCGAGTGCACAACTGAGATGGGAGGTGGCACAGCATATCCAACATTTTaGCTTGGAACACTGGATCAA | + |
|
Preference number: 4 (lower is better) Translates to: NPDKINRSECTTEMGGGTAYPTF*LGTLDQ Trigger: TTGATCCAGTGTTCCAAGCCAAAATGTTGGATATGC...TGTGCCACCTCCCATCTCAGTTGTGCACTCGCTTCTGTTTATTTTGTCCGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR TCA 90 bp | ATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGAACGAAGAAGGAACACATCAATCACTCTaGCGGTGTAATCATCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ITRSPSVPLTVSIGNEEGTHQSL*RCNHQQ Trigger: TTGTTGATGATTACACCGTCAGAGTGATTGATGTGT...TCCTTCTTCGTTCCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGGAAGAGATATAAACTaGTTCTGCTGTGTCCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: RWHRCLTHHQITFSSLNCGRDIN*FCCVHG Trigger: GCCGTGGACACAGCAGAACAAGTTTATATCTCTTCC...ACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CAA 90 bp | AGGTGGCACAGGTGTCTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTCAACAGTATCCAACATaGCGGCCAAACACTGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: RWHRCLTHHQITFSSLNCQQYPT*RPNTGQ Trigger: TTGTCCAGTGTTTGGCCGCAATGTTGGATACTGTTG...ACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAGACACCTGTGCCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CAA 90 bp | CTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGAACGACTCGGGCCTTCCTGTTaGTTTCAGCATATCCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: LTHHQITFSSLNCEHWERLGPSC*FQHIQH Trigger: ATGTTGGATATGCTGAAACAAACAGGAAGGCCCGAG...TCGTTCCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CAA 90 bp | CTCACACATCACCAGATCACCTTCAGTTCCCTTAACTGTGAGCATTGGGAACGATGCCAACATTCTTTATaGCCAGCTGTTCAGGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTHHQITFSSLNCEHWERCQHSL*PAVQVS Trigger: TGACACCTGAACAGCTGGCAATAAAGAATGTTGGCA...TCGTTCCCAATGCTCACAGTTAAGGGAACTGAAGGTGATCTGGTGATGTGTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS-3UTR CAA 90 bp | CTTTGGAATCTGCAAAACCCGGACAAAATAAACAGAAGCGAGTGCACAACTGAGCGTTTGGGATCCTGCTaGCCAACATTCTTTATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LWNLQNPDKINRSECTTERLGSC*PTFFIA Trigger: GGCAATAAAGAATGTTGGCAAGCAGGATCCCAAACG...CTCAGTTGTGCACTCGCTTCTGTTTATTTTGTCCGGGTTTTGCAGATTCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS TCA 72 bp | GCCACAGCTCTCTCCGACAAGGCTTCAAAGCTCTGCTaGGTGTTGATATCCACACCAGAAAGCCAACAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ATALSDKASKLC*VLISTPESQQP Trigger: TGGCTGTTGGCTTTCTGGTGTGGATATCAACACTCAGCAGAGCTTTGAAGCCTTGTCGGAGAGAGCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||
| CDS CAA 72 bp | TCGGGCCTTCCTGTTTGTTTCAGCATATCCAACATTTaGGCTTGGAACACTGGATCAACTGCTTCAACACTG | + |
|
Preference number: 6 (lower is better) Translates to: SGLPVCFSISNI*AWNTGSTASTL Trigger: CAGTGTTGAAGCAGTTGATCCAGTGTTCCAAGCCAAAATGTTGGATATGCTGAAACAAACAGGAAGGCCCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028278.14 |
||