Pregenerated sensors for PSMD13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025487Ensembl transcript IDs: ENSMUST00000026560.14, ENSMUST00000130462.8, ENSMUST00000163610.9, ENSMUST00000164681.8, ENSMUST00000165539.2, ENSMUST00000166889.8
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGATCTGCTGCAAATCCAGCACTCGCGGCTGCACCCACGTCATGTaGACCCGCTTGTCCACCTCGTCTATGCTGCCTCTCACCAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: LICCKSSTRGCTHVM*TRLSTSSMLPLTSP Trigger: GGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACAAGCGGGTTCACATGACGTGGGTGCAGCCGCGAGTGCTGGATTTGCAGCAGATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CCA 90 bp | ATCTTCCTCAGAAGCTGGGCTTCGTTGGCTGCTAAGTCAGGCTGCTaGCCCCAGGCACACTTCAGTGTCTGGAACCTATCCACAGCACCG | + |
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Preference number: 1 (lower is better) Translates to: IFLRSWASLAAKSGC*PQAHFSVWNLSTAP Trigger: CGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR TCA 90 bp | CCCAGGCACACTTCAGTGTCTGGAACCTATCCACAGCACCGCTATTaGAAGCGTACAGGGTGTCAATCAGCCACTGCCGGTCAGTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: PRHTSVSGTYPQHRY*KRTGCQSATAGQCP Trigger: GGGACACTGACCGGCAGTGGCTGATTGACACCCTGTACGCTTTCAATAGCGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGCCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR GCA 90 bp | TCCACAGCACCGCTATTGAAAGCGTACAGGGTGTCAATCAGCCACTaGCGGTCAGTGTCCCTCAGTGACTCCAGCACAGGGTGCATGAGA | + |
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Preference number: 1 (lower is better) Translates to: STAPLLKAYRVSISH*RSVSLSDSSTGCMR Trigger: TCTCATGCACCCTGTGCTGGAGTCACTGAGGGACACTGACCGGCAGTGGCTGATTGACACCCTGTACGCTTTCAATAGCGGTGCTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR GCA 90 bp | CTTGTCCACCTCGTCTATGCTGCCTCTCACCAGCCCCACCGAGAGTaGCTTCATCACCAGCAACTCCACCTTGTTGACAGTGATTTTGGC | + |
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Preference number: 1 (lower is better) Translates to: LVHLVYAASHQPHRE*LHHQQLHLVDSDFG Trigger: GCCAAAATCACTGTCAACAAGGTGGAGTTGCTGGTGATGAAGGCACTCTCGGTGGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CCA 90 bp | TTGGCTGCTAAGTCAGGCTGCTGGCCCCAGGCACACTTCAGTGTCTaGAACCTATCCACAGCACCGCTATTGAAAGCGTACAGGGTGTCA | + |
|
Preference number: 1 (lower is better) Translates to: LAAKSGCWPQAHFSV*NLSTAPLLKAYRVS Trigger: TGACACCCTGTACGCTTTCAATAGCGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CCA 90 bp | AAAGTCATCTCCATAAGGCACAACAGCTGGATCTTCCTCAGAAGCTaGGCTTCGTTGGCTGCTAAGTCAGGCTGCTGGCCCCAGGCACAC | + |
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Preference number: 1 (lower is better) Translates to: KVISIRHNSWIFLRS*ASLAAKSGCWPQAH Trigger: GTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGTGCCTTATGGAGATGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR TCA 90 bp | AGCGTACAGGGTGTCAATCAGCCACTGCCGGTCAGTGTCCCTCAGTaGCTCCAGCACAGGGTGCATGAGAAGTTCTCCAAAGTTAAAAAC | + |
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Preference number: 1 (lower is better) Translates to: SVQGVNQPLPVSVPQ*LQHRVHEKFSKVKN Trigger: GTTTTTAACTTTGGAGAACTTCTCATGCACCCTGTGCTGGAGTCACTGAGGGACACTGACCGGCAGTGGCTGATTGACACCCTGTACGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CCA 90 bp | TCAGCTGCAAGGGAGTCTGGGAGGGCTGAGCCTCTAGTTCTTTTCTaGGAAAAGCTAAGGGCAATGGAGCTGAAGGTGGAGGTGTGTAAT | + |
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Preference number: 1 (lower is better) Translates to: SAARESGRAEPLVLF*EKLRAMELKVEVCN Trigger: ATTACACACCTCCACCTTCAGCTCCATTGCCCTTAGCTTTTCCCAGAAAAGAACTAGAGGCTCAGCCCTCCCAGACTCCCTTGCAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR CCA 90 bp | CTTTGTAGTAGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTaGAGAGATCATAGAAACGACTGTGAACGGACGTCACACCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: LCSRTRGFRLFDSIY*RDHRNDCERTSHQG Trigger: TCCCTGGTGTGACGTCCGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CAA 90 bp | CGCAGCCAGCCTGGAAGTGCAGGGCGCAGACCTCAGAGGGCTGCTTaGCTAGGCCTCCACAGCAGTAATCCCACCTTGTGTGCGACAGCG | + |
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Preference number: 2 (lower is better) Translates to: RSQPGSAGRRPQRAA*LGLHSSNPTLCATA Trigger: CGCTGTCGCACACAAGGTGGGATTACTGCTGTGGAGGCCTAGCAAAGCAGCCCTCTGAGGTCTGCGCCCTGCACTTCCAGGCTGGCTGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCAAACCAGGAACACGTCTaGTGGAGCAGCAATTTCAGG | + |
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Preference number: 2 (lower is better) Translates to: GATELPCKVRQGLQDTGANQEHV*WSSNFR Trigger: CCTGAAATTGCTGCTCCAGCAGACGTGTTCCTGGTT...TGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCACTAGGTGAGGATGTCCTGCAAATCGGGATCACATaGGTATCAGCTGCAAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: CKVRQGLQDTGALGEDVLQIGIT*VSAARE Trigger: CTCCCTTGCAGCTGATACCCATGTGATCCCGATTTG...CAGGACATCCTCACCTAGTGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR CAA 90 bp | CCAAGTGAATACAGATCTCTGCTGATGGTTTCGGGGGCCACAGAATaGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCACTA | + |
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Preference number: 2 (lower is better) Translates to: PSEYRSLLMVSGATE*PCKVRQGLQDTGAL Trigger: TAGTGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCCGAAACCATCAGCAGAGATCTGTATTCACTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR-3UTR GCA 90 bp | CGCTTGTCCACCTCGTCTATGCTGCCTCTCACCAGCCCCACCGAGAGTGCCTTCTGCTCTTCACATCAGTaGACCAAAGCTCCAGACGGT | + |
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Preference number: 2 (lower is better) Translates to: RLSTSSMLPLTSPTESAFCSSHQ*TKAPDG Trigger: ACCGTCTGGAGCTTTGGTGCACTGATGTGAAGAGCA...GAAGGCACTCTCGGTGGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CAA 90 bp | CCCCAGGCACACTTCAGTGTCTGGAACCTATCCACAGCACCGCTATaGAAAGCGTACAGGGTGTCAATCAGCCACTGCCGGTCAGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: PQAHFSVWNLSTAPL*KAYRVSISHCRSVS Trigger: GGACACTGACCGGCAGTGGCTGATTGACACCCTGTACGCTTTCAATAGCGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGCCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CAA 90 bp | TCCATAAGGCACAACAGCTGGATCTTCCTCAGAAGCTGGGCTTCGTaGGCTGCTAAGTCAGGCTGCTGGCCCCAGGCACACTTCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: SIRHNSWIFLRSWAS*AAKSGCWPQAHFSV Trigger: GACACTGAAGTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGTGCCTTATGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCACGTCATGTGAACCCGCTTGTCCACCTCGTCTATGCTGCCTCTCACCAGTCTCTCTTGCTGTTCTaGCACTGGCAGGTCCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: HPRHVNPLVHLVYAASHQSLLLF*HWQVLD Trigger: ATCAAGGACCTGCCAGTGTCAGAACAGCAAGAGAGA...CTGGTGAGAGGCAGCATAGACGAGGTGGACAAGCGGGTTCACATGACGTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCTCAGAAGCTGGGCTTCGTTGGCTGCTAAGTCAGGCTGCTGGCCCCAGGCACACCAGGGAGATTGTTaGGCATCTCTTCAACATCTT | + |
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Preference number: 2 (lower is better) Translates to: FLRSWASLAAKSGCWPQAHQGDC*ASLQHL Trigger: AAGATGTTGAAGAGATGCTCAACAATCTCCCTGGTG...TGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCACCAAAGCTCCAGACGGTCCTTCATCCCCTTGATCTAAAGGCAAATCGGCAGACCTCAGAGGGCTaGTTTGCTAGGCCTCCACAG | + |
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Preference number: 2 (lower is better) Translates to: SAPKLQTVLHPLDLKANRQTSEG*FARPPQ Trigger: CTGTGGAGGCCTAGCAAAGCAGCCCTCTGAGGTCTG...CCGATTTGCCTTTAGATCAAGGGGATGAAGGACCGTCTGGAGCTTTGGTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTCTGTGGTTGGCAGGCCGTGTGAAAGTCATCTCCATAAGGCACAACAGCGTGTCAATCAGCCACTaGCGGTCAGTGTCCCTCAGT | + |
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Preference number: 2 (lower is better) Translates to: SCLWLAGRVKVISIRHNSVSISH*RSVSLS Trigger: ACTGAGGGACACTGACCGGCAGTGGCTGATTGACAC...GCTGTTGTGCCTTATGGAGATGACTTTCACACGGCCTGCCAACCACAGACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTGGTTGGCAGGCCGTGTGAAAGTCATCTCCATAAGGCACAACAGCTGGGCACACTTCAGTGTCTaGAACCTATCCACAGCACCG | + |
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Preference number: 2 (lower is better) Translates to: CLWLAGRVKVISIRHNSWAHFSV*NLSTAP Trigger: CGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGC...CCAGCTGTTGTGCCTTATGGAGATGACTTTCACACGGCCTGCCAACCACAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR GCA 90 bp | AGTTGTCTGTGGTTGGCAGGCCGTGTGAAAGTCATCTCCATAAGGCACAACAGCCCACCAGCATCTCCATaGTCTTCACATCAGTGCACC | + |
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Preference number: 2 (lower is better) Translates to: SCLWLAGRVKVISIRHNSPPASP*SSHQCT Trigger: GGTGCACTGATGTGAAGAGCATGGAGATGCTGGTGG...GCTGTTGTGCCTTATGGAGATGACTTTCACACGGCCTGCCAACCACAGACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGTGGTTGGCAGGCCGTGTGAAAGTCATCTCCATAAGGCACAACAGCTGGATCTTCCTCAGAAGCTaGGCTTCGTTGGCTGCTAAG | + |
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Preference number: 2 (lower is better) Translates to: CLWLAGRVKVISIRHNSWIFLRS*ASLAAK Trigger: CTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGAT...CCAGCTGTTGTGCCTTATGGAGATGACTTTCACACGGCCTGCCAACCACAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGCTCCAGACGGTCCTTCATCCCCTTGATCTAAAGGCAAATCGGGATCACAAACTCCATCCCAAGTaGATACAGATCTCTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: PKLQTVLHPLDLKANRDHKLHPK*IQISAD Trigger: ATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTT...GTGATCCCGATTTGCCTTTAGATCAAGGGGATGAAGGACCGTCTGGAGCTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCGACAGTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCAAACTCCATCCCAAGTaGATACAGATCTCTGCTGAT | + |
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Preference number: 2 (lower is better) Translates to: QRQFSAFIARTVPTPSRIKLHPK*IQISAD Trigger: ATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTT...GATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAACTGTCGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| 3UTR CAA 90 bp | TTCATCACCAGCAACTCCACCTTGTTGACAGTGATTTTGGCACTTTaGGCAATTTCTTCAAAAGTGAGTTGTCTGTGGTTGGCAGGCCGT | + |
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Preference number: 2 (lower is better) Translates to: FITSNSTLLTVILAL*AISSKVSCLWLAGR Trigger: ACGGCCTGCCAACCACAGACAACTCACTTTTGAAGAAATTGCCAAAAGTGCCAAAATCACTGTCAACAAGGTGGAGTTGCTGGTGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CAA 90 bp | CCAGAAACCGTAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAA | + |
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Preference number: 2 (lower is better) Translates to: PETVEHLCSRTRGFR*FDSIYWRDHRNDCE Trigger: TTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTACGGTTTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR TCA 72 bp | GGTGCGGCAGGGTCTGCAGGACACCGGGGCACTAGGTaGGGATGTCCTGAGCCTGGTGTTCCACCAGCATCT | + |
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Preference number: 3 (lower is better) Translates to: GAAGSAGHRGTR*GCPEPGVPPAS Trigger: AGATGCTGGTGGAACACCAGGCTCAGGACATCCTCACCTAGTGCCCCGGTGTCCTGCAGACCCTGCCGCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR GCA 72 bp | CCCACGTCATGTGAACCCGCTTGTCCACCTCGTCTATaGTGCCTCTCACCAGCCCCACCGAGAGTGCCTTCA | + |
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Preference number: 3 (lower is better) Translates to: PTSCEPACPPRL*CLSPAPPRVPS Trigger: TGAAGGCACTCTCGGTGGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACAAGCGGGTTCACATGACGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR TCA 72 bp | TGCAAATCCAGCACTCGCGGCTGCACCCACGTCATGTaGACCCGCTTGTCCACCTCGTCTATGCTGCCTCTC | + |
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Preference number: 3 (lower is better) Translates to: CKSSTRGCTHVM*TRLSTSSMLPL Trigger: GAGAGGCAGCATAGACGAGGTGGACAAGCGGGTTCACATGACGTGGGTGCAGCCGCGAGTGCTGGATTTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR GCA 72 bp | CCGCTATTGAAAGCGTACAGGGTGTCAATCAGCCACTaGCGGTCAGTGTCCCTCAGTGACTCCAGCACAGGG | + |
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Preference number: 3 (lower is better) Translates to: PLLKAYRVSISH*RSVSLSDSSTG Trigger: CCCTGTGCTGGAGTCACTGAGGGACACTGACCGGCAGTGGCTGATTGACACCCTGTACGCTTTCAATAGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CCA 72 bp | AGAAGCTGGGCTTCGTTGGCTGCTAAGTCAGGCTGCTaGCCCCAGGCACACTTCAGTGTCTGGAACCTATCC | + |
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Preference number: 3 (lower is better) Translates to: RSWASLAAKSGC*PQAHFSVWNLS Trigger: GGATAGGTTCCAGACACTGAAGTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CCA 72 bp | ACAACAGCTGGATCTTCCTCAGAAGCTGGGCTTCGTTaGCTGCTAAGTCAGGCTGCTGGCCCCAGGCACACT | + |
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Preference number: 3 (lower is better) Translates to: TTAGSSSEAGLR*LLSQAAGPRHT Trigger: AGTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CCA 72 bp | TCCATAAGGCACAACAGCTGGATCTTCCTCAGAAGCTaGGCTTCGTTGGCTGCTAAGTCAGGCTGCTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SIRHNSWIFLRS*ASLAAKSGCWP Trigger: GGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGTGCCTTATGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR TCA 72 bp | TCCCACTCCGAGCAGGATCCTAAACTCCATCCCAAGTaGATACAGATCTCTGCTGATGGTTTCGGGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: SHSEQDPKLHPK*IQISADGFGGH Trigger: GTGGCCCCCGAAACCATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTTAGGATCCTGCTCGGAGTGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| 3UTR CCA 72 bp | AGGGAGTCTGGGAGGGCTGAGCCTCTAGTTCTTTTCTaGGAAAAGCTAAGGGCAATGGAGCTGAAGGTGGAG | + |
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Preference number: 3 (lower is better) Translates to: RESGRAEPLVLF*EKLRAMELKVE Trigger: CTCCACCTTCAGCTCCATTGCCCTTAGCTTTTCCCAGAAAAGAACTAGAGGCTCAGCCCTCCCAGACTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR TCA 72 bp | ACTTCAGTGTCTGGAACCTATCCACAGCACCGCTATTaGAAGCGTACAGGGTGTCAATCAGCCACTGCCGGT | + |
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Preference number: 3 (lower is better) Translates to: TSVSGTYPQHRY*KRTGCQSATAG Trigger: ACCGGCAGTGGCTGATTGACACCCTGTACGCTTTCAATAGCGGTGCTGTGGATAGGTTCCAGACACTGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR-3UTR CAA 90 bp | ATCAGTGCACCAAAGCTCCAGACGGTCCTTCATCCCCTTGATCTGCTGCAAATCTTCTTCAAAAGTGAGTaGTCTGTGGTTGGCAGGCCG | + |
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Preference number: 3 (lower is better) Translates to: ISAPKLQTVLHPLDLLQIFFKSE*SVVGRP Trigger: CGGCCTGCCAACCACAGACAACTCACTTTTGAAGAA...GATTTGCAGCAGATCAAGGGGATGAAGGACCGTCTGGAGCTTTGGTGCACTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR TCA 72 bp | CAGTGCACCAAAGCTCCAGACGGTCCTTCATCCCCTTaGTCTAAAGGCAAATCGGGATCACATGGGTATCAG | + |
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Preference number: 3 (lower is better) Translates to: QCTKAPDGPSSP*SKGKSGSHGYQ Trigger: CTGATACCCATGTGATCCCGATTTGCCTTTAGATCAAGGGGATGAAGGACCGTCTGGAGCTTTGGTGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR TCA 72 bp | AGGCTCTCTCTTGCTGTTCTGACACTGGCAGGTCCTTaGTATCCACACAGCCCAGAAACCGTAGAGCATCTT | + |
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Preference number: 3 (lower is better) Translates to: RLSLAVLTLAGP*YPHSPETVEHL Trigger: AAGATGCTCTACGGTTTCTGGGCTGTGTGGATATCAAGGACCTGCCAGTGTCAGAACAGCAAGAGAGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR GCA 72 bp | GGGCATGGGATCAAGTCACAAAACCAGGAACACGTCTaGTGGAGCAGCAATTTCAGGATTAGGAGGCATCAG | + |
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Preference number: 3 (lower is better) Translates to: GHGIKSQNQEHV*WSSNFRIRRHQ Trigger: CTGATGCCTCCTAATCCTGAAATTGCTGCTCCAGCAGACGTGTTCCTGGTTTTGTGACTTGATCCCATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| 3UTR CCA 72 bp | AGGACGCGTGGTTTCCGATTGTTTGATAGTATTTACTaGAGAGATCATAGAAACGACTGTGAACGGACGTCA | + |
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Preference number: 3 (lower is better) Translates to: RTRGFRLFDSIY*RDHRNDCERTS Trigger: TGACGTCCGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| CDS-3UTR TCA 90 bp | GGGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCGTCAGTGTCCCTCAGTaGCTCCAGCACAGGGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: GGHRIALQGAAGSAGHRGVSVPQ*LQHRVH Trigger: ATGCACCCTGTGCTGGAGTCACTGAGGGACACTGAC...GCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 ENSMUST00000163610.9 |
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| CDS-3UTR TCA 90 bp | GGATTAGGAGGCATCAGCAGCGCAGCCAGCCTGGAAGTGCAGGGCGCAGACCTCTGCACCCACGTCATGTaGACCCGCTTGTCCACCTCG | + |
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Preference number: 4 (lower is better) Translates to: GLGGISSAASLEVQGADLCTHVM*TRLSTS Trigger: CGAGGTGGACAAGCGGGTTCACATGACGTGGGTGCA...GAGGTCTGCGCCCTGCACTTCCAGGCTGGCTGCGCTGCTGATGCCTCCTAATCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| CDS-3UTR CCA 90 bp | GGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCAGCTAAGTCAGGCTGCTaGCCCCAGGCACACTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: GATELPCKVRQGLQDTGAAKSGC*PQAHFS Trigger: ACTGAAGTGTGCCTGGGGCCAGCAGCCTGACTTAGC...TGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 ENSMUST00000163610.9 |
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| CDS-3UTR TCA 90 bp | CACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCACCCGGCCCGGAGCTCTaGCTCTGCTGTAAGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: HTGQSPLRWSWVETTLSPPGPEL*LCCKKA Trigger: GGCCTTCTTACAGCAGAGTCAGAGCTCCGGGCCGGG...TGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| CDS-3UTR GCA 90 bp | TGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCACTAGGTGAGGATGTCCTGCAGCCCCACCGAGAGTaGCTTCATCACCAGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: CKVRQGLQDTGALGEDVLQPHRE*LHHQQL Trigger: GAGTTGCTGGTGATGAAGGCACTCTCGGTGGGGCTG...CAGGACATCCTCACCTAGTGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| 3UTR CAA 72 bp | ATCTCTGCTGATGGTTTCGGGGGCCACAGAATTGCCTaGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISADGFGGHRIA*QGAAGSAGHRG Trigger: GCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCCGAAACCATCAGCAGAGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCTGCAGGACACCGGGGCACTAGGTGAGGATGTCCTGAGCCTGGTGTTCGTCAGTGTCCCTCAGTaGCTCCAGCACAGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QGLQDTGALGEDVLSLVFVSVPQ*LQHRVH Trigger: ATGCACCCTGTGCTGGAGTCACTGAGGGACACTGAC...GAACACCAGGCTCAGGACATCCTCACCTAGTGCCCCGGTGTCCTGCAGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR TCA 90 bp | CCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCTGCACCCACGTCATGTaGACCCGCTTGTCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PHWTKSTQVELGGDYPVPCTHVM*TRLSTS Trigger: CGAGGTGGACAAGCGGGTTCACATGACGTGGGTGCA...GGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | GGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCACCACCAGCATCTCCATaGTCTTCACATCAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GATELPCKVRQGLQDTGAPPASP*SSHQCT Trigger: GGTGCACTGATGTGAAGAGCATGGAGATGCTGGTGG...TGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | CCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCACTAGGTGAGGATGTCGAAGCTGGGCTTCGTTaGCTGCTAAGTCAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCKVRQGLQDTGALGEDVEAGLR*LLSQAA Trigger: AGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTC...GACATCCTCACCTAGTGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR GCA 90 bp | GGGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCGCAAAGCATGGGTCCTaGACAAAATCAAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGHRIALQGAAGSAGHRGAKHGS*TKSSTS Trigger: TGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGC...GCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | CCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCCAGCCCCACCGAGAGTaGCTTCATCACCAGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: PHWTKSTQVELGGDYPVPQPHRE*LHHQQL Trigger: GAGTTGCTGGTGATGAAGGCACTCTCGGTGGGGCTG...GGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| 3UTR CAA 72 bp | CCTGGAAGTGCAGGGCGCAGACCTCAGAGGGCTGCTTaGCTAGGCCTCCACAGCAGTAATCCCACCTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGSAGRRPQRAA*LGLHSSNPTLC Trigger: ACACAAGGTGGGATTACTGCTGTGGAGGCCTAGCAAAGCAGCCCTCTGAGGTCTGCGCCCTGCACTTCCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| 3UTR CAA 72 bp | CACAACAGCTGGATCTTCCTCAGAAGCTGGGCTTCGTaGGCTGCTAAGTCAGGCTGCTGGCCCCAGGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HNSWIFLRSWAS*AAKSGCWPQAH Trigger: GTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
||
| CDS-3UTR TCA 90 bp | GGATTAGGAGGCATCAGCAGCGCAGCCAGCCTGGAAGTGCAGGGCGCAGACCTCTCTCTCTTGCTGTTCTaGCACTGGCAGGTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GLGGISSAASLEVQGADLSLLLF*HWQVLD Trigger: ATCAAGGACCTGCCAGTGTCAGAACAGCAAGAGAGA...GAGGTCTGCGCCCTGCACTTCCAGGCTGGCTGCGCTGCTGATGCCTCCTAATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCTGCACCCACGTCATGTaGACCCGCTTGTCCACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: TGQSPLRWSWVETTLSPFCTHVM*TRLSTS Trigger: CGAGGTGGACAAGCGGGTTCACATGACGTGGGTGCA...GAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | TGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCACTAGGTGAGGATGTCCTGGACTCCAGCACAGGGTaGATGAGAAGTTCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: CKVRQGLQDTGALGEDVLDSSTG*MRSSPK Trigger: CTTTGGAGAACTTCTCATGCACCCTGTGCTGGAGTC...CAGGACATCCTCACCTAGTGCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR GCA 90 bp | CTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCTGTCCACCTCGTCTATaGTGCCTCTCACCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LDKVHSGGAGWRLPCPHSCPPRL*CLSPAP Trigger: TGGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACA...GGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | ATTAGGAGGCATCAGCAGCGCAGCCAGCCTGGAAGTGCAGGGCGCAGACCTCAGGCACACTTCAGTGTCTaGAACCTATCCACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: IRRHQQRSQPGSAGRRPQAHFSV*NLSTAP Trigger: CGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGC...CTGAGGTCTGCGCCCTGCACTTCCAGGCTGGCTGCGCTGCTGATGCCTCCTAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTGCTAAGTCAGGCTGCTaGCCCCAGGCACACTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVELGGDYPVPIPIRALSAKSGC*PQAHFS Trigger: ACTGAAGTGTGCCTGGGGCCAGCAGCCTGACTTAGC...AGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCAGCAAGCCCCAGTGTaGAGGCTCTCTCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPLRWSWVETTLSPFPFVQQAPV*RLSLAV Trigger: AACAGCAAGAGAGAGCCTTCACACTGGGGCTTGCTG...CACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | ACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCGTCAGTGTCCCTCAGTaGCTCCAGCACAGGGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TGQSPLRWSWVETTLSPFVSVPQ*LQHRVH Trigger: ATGCACCCTGTGCTGGAGTCACTGAGGGACACTGAC...GAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | AATTTCAGGATTAGGAGGCATCAGCAGCGCAGCCAGCCTGGAAGTGCAGGGCGCGTGTCAATCAGCCACTaGCGGTCAGTGTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NFRIRRHQQRSQPGSAGRVSISH*RSVSLS Trigger: ACTGAGGGACACTGACCGGCAGTGGCTGATTGACAC...GCGCCCTGCACTTCCAGGCTGGCTGCGCTGCTGATGCCTCCTAATCCTGAAATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR CCA 90 bp | CCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCGCACACTTCAGTGTCTaGAACCTATCCACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: PHWTKSTQVELGGDYPVPAHFSV*NLSTAP Trigger: CGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGC...GGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTCATCACCTGCTAAGTCAGGCTGCTaGCCCCAGGCACACTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGWRLPCPHSHSCPFSSPAKSGC*PQAHFS Trigger: ACTGAAGTGTGCCTGGGGCCAGCAGCCTGACTTAGC...AGGTGATGAGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | CTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCGAAGCTGGGCTTCGTTaGCTGCTAAGTCAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LDKVHSGGAGWRLPCPHSEAGLR*LLSQAA Trigger: AGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTC...GGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | CAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTGAAGCTGGGCTTCGTTaGCTGCTAAGTCAGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVELGGDYPVPIPIRALSEAGLR*LLSQAA Trigger: AGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTC...AGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| 3UTR CAA 72 bp | TACAGATCTCTGCTGATGGTTTCGGGGGCCACAGAATaGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACC | + |
|
Preference number: 4 (lower is better) Translates to: YRSLLMVSGATE*PCKVRQGLQDT Trigger: GGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCCGAAACCATCAGCAGAGATCTGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 ENSMUST00000163610.9 |
||
| 3UTR CAA 72 bp | TCAGTGCACCAAAGCTCCAGACGGTCCTTCATCCCCTaGATCTGCTGCAAATCCAGCACTCGCGGCTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVHQSSRRSFIP*ICCKSSTRGCT Trigger: GGTGCAGCCGCGAGTGCTGGATTTGCAGCAGATCAAGGGGATGAAGGACCGTCTGGAGCTTTGGTGCACTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTCATCACCCAGCAAGCCCCAGTGTaGAGGCTCTCTCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWVETTLSPFPFVPFLITQQAPV*RLSLAV Trigger: AACAGCAAGAGAGAGCCTTCACACTGGGGCTTGCTG...GGTGATGAGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTCATCACCTGTGTCAATCAGCCACTaGCGGTCAGTGTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: AGWRLPCPHSHSCPFSSPVSISH*RSVSLS Trigger: ACTGAGGGACACTGACCGGCAGTGGCTGATTGACAC...AGGTGATGAGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | GGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCAATGAGACCATCTCCTTaGGCAAAGCATGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQSPLRWSWVETTLSPFPMRPSP*AKHGSC Trigger: GCAGGACCCATGCTTTGCCCAAGGAGATGGTCTCAT...TGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | CTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCACCTCAAGTGTCAGCTaGTGCCACAACTTCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LDKVHSGGAGWRLPCPHSTSSVS*CHNFFV Trigger: CACGAAGAAGTTGTGGCATCAGCTGACACTTGAGGT...GGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | TCAGACCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGACACTGGCAGGTCCTTaGTATCCACACAGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SDHTGQSPLRWSWVETTLTLAGP*YPHSPE Trigger: TTCTGGGCTGTGTGGATATCAAGGACCTGCCAGTGT...CAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | GAGCCTGGTGTTCCACCAGCATCTCCATGCTCTTCACATCAGTGCACCAAAGCTTGTCCACCTCGTCTATaGTGCCTCTCACCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EPGVPPASPCSSHQCTKACPPRL*CLSPAP Trigger: TGGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACA...AGCTTTGGTGCACTGATGTGAAGAGCATGGAGATGCTGGTGGAACACCAGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR GCA 90 bp | AGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGTGCTCTTCACATCAGTaGACCAAAGCTCCAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPLRWSWVETTLSPFPFVCSSHQ*TKAPDG Trigger: ACCGTCTGGAGCTTTGGTGCACTGATGTGAAGAGCA...CACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | ACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCGCACACTTCAGTGTCTaGAACCTATCCACAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: TGQSPLRWSWVETTLSPFAHFSV*NLSTAP Trigger: CGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGC...GAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | GTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCCCGGCCCGGAGCTCTaGCTCTGCTGTAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLCFYSKNSSHSEQDPKLPGPEL*LCCKKA Trigger: GGCCTTCTTACAGCAGAGTCAGAGCTCCGGGCCGGG...GAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | CTAGGTGAGGATGTCCTGAGCCTGGTGTTCCACCAGCATCTCCATGCTCTTCACACACTGGCAGGTCCTTaGTATCCACACAGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LGEDVLSLVFHQHLHALHTLAGP*YPHSPE Trigger: TTCTGGGCTGTGTGGATATCAAGGACCTGCCAGTGT...GTGAAGAGCATGGAGATGCTGGTGGAACACCAGGCTCAGGACATCCTCACCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTTCTCTCTTGCTGTTCTaGCACTGGCAGGTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KSTQVELGGDYPVPIPIRSLLLF*HWQVLD Trigger: ATCAAGGACCTGCCAGTGTCAGAACAGCAAGAGAGA...ACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | GGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTCAGCAAAGCATGGGTCCTaGACAAAATCAAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGAGWRLPCPHSHSCPFSAKHGS*TKSSTS Trigger: TGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGC...TGAGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | TGGATCTTCCTCAGAAGCTGGGCTTCGTTGGCTGCTAAGTCAGGCTGCTGGCCCGCAAAGCATGGGTCCTaGACAAAATCAAGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WIFLRSWASLAAKSGCWPAKHGS*TKSSTS Trigger: TGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGC...GGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTCATCACCTGACTCCAGCACAGGGTaGATGAGAAGTTCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGWRLPCPHSHSCPFSSPDSSTG*MRSSPK Trigger: CTTTGGAGAACTTCTCATGCACCCTGTGCTGGAGTC...AGGTGATGAGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | ATCCTAAACTCCATCCCAAGTGAATACAGATCTCTGCTGATGGTTTCGGGGGCCCCCAGCCCCCTTACCTaGTGCAAATCCAGCACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: ILNSIPSEYRSLLMVSGAPSPLT*CKSSTR Trigger: GCGAGTGCTGGATTTGCAGCAGGTAAGGGGGCTGGG...GGCCCCCGAAACCATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTTAGGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| 3UTR CAA 72 bp | CACTTCAGTGTCTGGAACCTATCCACAGCACCGCTATaGAAAGCGTACAGGGTGTCAATCAGCCACTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HFSVWNLSTAPL*KAYRVSISHCR Trigger: CCGGCAGTGGCTGATTGACACCCTGTACGCTTTCAATAGCGGTGCTGTGGATAGGTTCCAGACACTGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGACAGTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCTGTCCACCTCGTCTATaGTGCCTCTCACCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQFSAFIARTVPTPSRICPPRL*CLSPAP Trigger: TGGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACA...GATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAACTGTCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | CTAGGTGAGGATGTCCTGAGCCTGGTGTTCCACCAGCATCTCCATGCTCTTCACATCTTCCTCAGAAGCTaGGCTTCGTTGGCTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGEDVLSLVFHQHLHALHIFLRS*ASLAAK Trigger: CTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGAT...GTGAAGAGCATGGAGATGCTGGTGGAACACCAGGCTCAGGACATCCTCACCTAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCCCTTTCTCATCACCTAAAGTGAGTTGTCTGTaGTTGGCAGGCCGTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AGWRLPCPHSHSCPFSSPKVSCL*LAGRVK Trigger: TTTCACACGGCCTGCCAACCACAGACAACTCACTTT...AGGTGATGAGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026560.14 |
||
| CDS-3UTR TCA 90 bp | TCAGACCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGCACCAGGGAGATTGTTaGGCATCTCTTCAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SDHTGQSPLRWSWVETTLHQGDC*ASLQHL Trigger: AAGATGTTGAAGAGATGCTCAACAATCTCCCTGGTG...CAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | CAGCGACAGTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCGTGTCAATCAGCCACTaGCGGTCAGTGTCCCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRQFSAFIARTVPTPSRIVSISH*RSVSLS Trigger: ACTGAGGGACACTGACCGGCAGTGGCTGATTGACAC...GATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAACTGTCGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | CACCAGCGACAGTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATGAGACCATCTCCTTaGGCAAAGCATGGGTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HQRQFSAFIARTVPTPSRMRPSP*AKHGSC Trigger: GCAGGACCCATGCTTTGCCCAAGGAGATGGTCTCAT...CCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAACTGTCGCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCAGCAATTTCAGGATTAGGAGGCATCAGCAGCGCAGCCAGCCTGGAAGTAAAGTGAGTTGTCTGTaGTTGGCAGGCCGTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WSSNFRIRRHQQRSQPGSKVSCL*LAGRVK Trigger: TTTCACACGGCCTGCCAACCACAGACAACTCACTTT...ACTTCCAGGCTGGCTGCGCTGCTGATGCCTCCTAATCCTGAAATTGCTGCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR TCA 90 bp | CGATTGTTTGATAGTATTTACTGGAGAGATCATAGAAACGACTGTGAACGGACGCCCGGCCCGGAGCTCTaGCTCTGCTGTAAGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLFDSIYWRDHRNDCERTPGPEL*LCCKKA Trigger: GGCCTTCTTACAGCAGAGTCAGAGCTCCGGGCCGGG...CGTCCGTTCACAGTCGTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCCGGGAAACATGATAGGGCATGGGATCAAGTCACAAAACCAGGAACACGTCAGCAAGCCCCAGTGTaGAGGCTCTCTCTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSGKHDRAWDQVTKPGTRQQAPV*RLSLAV Trigger: AACAGCAAGAGAGAGCCTTCACACTGGGGCTTGCTG...ACGTGTTCCTGGTTTTGTGACTTGATCCCATGCCCTATCATGTTTCCCGGACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR GCA 90 bp | TCAGACCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGGTTTCCTTTGTAGCCTaGAGATCGCCGATGTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: SDHTGQSPLRWSWVETTLVSFVA*RSPMFN Trigger: ATTAAACATCGGCGATCTGCAGGCTACAAAGGAAAC...CAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | ACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCGTTTCCTTTGTAGCCTaGAGATCGCCGATGTTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TGQSPLRWSWVETTLSPFVSFVA*RSPMFN Trigger: ATTAAACATCGGCGATCTGCAGGCTACAAAGGAAAC...GAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | TCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATCCAGCCCCACCGAGAGTaGCTTCATCACCAGCAACTC | + |
|
Preference number: 4 (lower is better) Translates to: SAFIARTVPTPSRILNSIQPHRE*LHHQQL Trigger: GAGTTGCTGGTGATGAAGGCACTCTCGGTGGGGCTG...GATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | CACCAGCGACAGTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCTTCCTCAGAAGCTaGGCTTCGTTGGCTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQRQFSAFIARTVPTPSRIFLRS*ASLAAK Trigger: CTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGAT...CCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAACTGTCGCTGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| 3UTR CAA 72 bp | AAGGCTCTCTCTTGCTGTTCTGACACTGGCAGGTCCTaGATATCCACACAGCCCAGAAACCGTAGAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KALSCCSDTGRS*ISTQPRNRRAS Trigger: AGATGCTCTACGGTTTCTGGGCTGTGTGGATATCAAGGACCTGCCAGTGTCAGAACAGCAAGAGAGAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
||
| CDS-3UTR CCA 90 bp | GGCACACTTCAGTGTCTGGAACCTATCCACAGCACCGCTATTGAAAGCGTACAGTCCTTGGGCAAAGCATaGGTCCTGCACAAAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GTLQCLEPIHSTAIESVQSLGKA*VLHKIK Trigger: CTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGA...CTGTACGCTTTCAATAGCGGTGCTGTGGATAGGTTCCAGACACTGAAGTGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| CDS-3UTR CCA 90 bp | ATCCTAAACTCCATCCCAAGTGAATACAGATCTCTGCTGATGGTTTCGGGGGCCATCTTCCTCAGAAGCTaGGCTTCGTTGGCTGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILNSIPSEYRSLLMVSGAIFLRS*ASLAAK Trigger: CTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGAT...GGCCCCCGAAACCATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTTAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATCACACTGGCAGGTCCTTaGTATCCACACAGCCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SAFIARTVPTPSRILNSITLAGP*YPHSPE Trigger: TTCTGGGCTGTGTGGATATCAAGGACCTGCCAGTGT...GATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| CDS-3UTR GCA 90 bp | TCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATCCCACCAGCATCTCCATaGTCTTCACATCAGTGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SAFIARTVPTPSRILNSIPPASP*SSHQCT Trigger: GGTGCACTGATGTGAAGAGCATGGAGATGCTGGTGG...GATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | TCAGACCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGATCTGTCTAACCACATaGAGAATTATTTCTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SDHTGQSPLRWSWVETTLICLTT*RIISTR Trigger: CCTGGTAGAAATAATTCTCCATGTGGTTAGACAGAT...CAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATACCTCAAGTGTCAGCTaGTGCCACAACTTCTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LCFYSKNSSHSEQDPKLHTSSVS*CHNFFV Trigger: CACGAAGAAGTTGTGGCATCAGCTGACACTTGAGGT...ATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | CAGCGACAGTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCACCAGGGAGATTGTTaGGCATCTCTTCAACATCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRQFSAFIARTVPTPSRIHQGDC*ASLQHL Trigger: AAGATGTTGAAGAGATGCTCAACAATCTCCCTGGTG...GATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAACTGTCGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR TCA 90 bp | TCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATCTCTCTCTTGCTGTTCTaGCACTGGCAGGTCCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAFIARTVPTPSRILNSISLLLF*HWQVLD Trigger: ATCAAGGACCTGCCAGTGTCAGAACAGCAAGAGAGA...GATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATGACTCCAGCACAGGGTaGATGAGAAGTTCTCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LCFYSKNSSHSEQDPKLHDSSTG*MRSSPK Trigger: CTTTGGAGAACTTCTCATGCACCCTGTGCTGGAGTC...ATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATTGCTCTTCACATCAGTaGACCAAAGCTCCAGACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCFYSKNSSHSEQDPKLHCSSHQ*TKAPDG Trigger: ACCGTCTGGAGCTTTGGTGCACTGATGTGAAGAGCA...ATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | GTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCTCCTTGGGCAAAGCATaGGTCCTGCACAAAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLCFYSKNSSHSEQDPKLSLGKA*VLHKIK Trigger: CTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGA...GAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CCA 90 bp | TCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATCTCCTTGGGCAAAGCATaGGTCCTGCACAAAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAFIARTVPTPSRILNSISLGKA*VLHKIK Trigger: CTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGA...GATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| 3UTR CAA 72 bp | CCTGCAGATCGCCGATGTTTAATTTTAGAGCTCCGATaGCCGTCTTACACAAGATCACGGCTTCATCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: PADRRCLILELR*PSYTRSRLHHY Trigger: GTAGTGATGAAGCCGTGATCTTGTGTAAGACGGCAATCGGAGCTCTAAAATTAAACATCGGCGATCTGCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CAA 72 bp | CTTTTGGCAATTTCTTCAAAAGTGAGTTGTCTGTGGTaGGCAGGCCGTGTGAAAGTCATCTCCATAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLAISSKVSCLW*AGRVKVISIRH Trigger: GTGCCTTATGGAGATGACTTTCACACGGCCTGCCAACCACAGACAACTCACTTTTGAAGAAATTGCCAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| CDS-3UTR CCA 90 bp | GTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCATCTGTCTAACCACATaGAGAATTATTTCTACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCFYSKNSSHSEQDPKLICLTT*RIISTR Trigger: CCTGGTAGAAATAATTCTCCATGTGGTTAGACAGAT...GAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| 3UTR CAA 72 bp | AGCAACTCCACCTTGTTGACAGTGATTTTGGCACTTTaGGCAATTTCTTCAAAAGTGAGTTGTCTGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNSTLLTVILAL*AISSKVSCLWL Trigger: CAACCACAGACAACTCACTTTTGAAGAAATTGCCAAAAGTGCCAAAATCACTGTCAACAAGGTGGAGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CAA 72 bp | GTAGAGCATCTTTGTAGTAGGACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGGAGAGATCATAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VEHLCSRTRGFR*FDSIYWRDHRN Trigger: GTTTCTATGATCTCTCCAGTAAATACTATCAAACAATCGGAAACCACGCGTCCTACTACAAAGATGCTCTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| 3UTR CAA 72 bp | TTCATCACCAGCAACTCCACCTTGTTGACAGTGATTTaGGCACTTTTGGCAATTTCTTCAAAAGTGAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FITSNSTLLTVI*ALLAISSKVSC Trigger: ACAACTCACTTTTGAAGAAATTGCCAAAAGTGCCAAAATCACTGTCAACAAGGTGGAGTTGCTGGTGATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| CDS-3UTR CAA 90 bp | GGGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCAGAAGCTGGGCTTCGTaGGCTGCTAAGTCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GGHRIALQGAAGSAGHRGRSWAS*AAKSGC Trigger: GCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCT...GCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 ENSMUST00000163610.9 |
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| CDS-3UTR CAA 90 bp | ATCAGCAGCGCAGCCAGCCTGGAAGTGCAGGGCGCAGACCTCAGAGGGCTGCTTAGAAGCTGGGCTTCGTaGGCTGCTAAGTCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ISSAASLEVQGADLRGLLRSWAS*AAKSGC Trigger: GCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCT...AAGCAGCCCTCTGAGGTCTGCGCCCTGCACTTCCAGGCTGGCTGCGCTGCTGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| CDS TCA 90 bp | CTTACCTGCTGCAAATCCAGCACTCGCGGCTGCACCCACGTCATGTaGACCCGCTTGTCCACCTCGTCTATGCTGCCTCTCACCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTCCKSSTRGCTHVM*TRLSTSSMLPLTSP Trigger: GGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACAAGCGGGTTCACATGACGTGGGTGCAGCCGCGAGTGCTGGATTTGCAGCAGGTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR CAA 90 bp | GGGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCGTCACACCAGGGAGATaGTTGAGCATCTCTTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: GGHRIALQGAAGSAGHRGVTPGR*LSISST Trigger: TGTTGAAGAGATGCTCAACAATCTCCCTGGTGTGAC...GCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| CDS GCA 90 bp | CTTGTCCACCTCGTCTATGCTGCCTCTCACCAGCCCCACCGAGAGTaGCTTCATCACCAGCAACTCCACCTCCATAAGGCACAACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVHLVYAASHQPHRE*LHHQQLHLHKAQQL Trigger: CAGCTGTTGTGCCTTATGGAGGTGGAGTTGCTGGTGATGAAGGCACTCTCGGTGGGGCTGGTGAGAGGCAGCATAGACGAGGTGGACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163610.9 |
||
| CDS CCA 90 bp | AACTCCACCTCCATAAGGCACAACAGCTGGATCTTCCTCAGAAGCTaGGCTTCGTTGGCTGCTAAGTCAGGCTGCTGGCCCCAGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: NSTSIRHNSWIFLRS*ASLAAKSGCWPQAH Trigger: GTGTGCCTGGGGCCAGCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGTGCCTTATGGAGGTGGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163610.9 |
||
| CDS-3UTR CAA 90 bp | GGGGGCCACAGAATTGCCTTGCAAGGTGCGGCAGGGTCTGCAGGACACCGGGGCACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGHRIALQGAAGSAGHRGTRGFR*FDSIYW Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...GCCCCGGTGTCCTGCAGACCCTGCCGCACCTTGCAAGGCAATTCTGTGGCCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGCGGTCCTTCATCCCCTaGATCTGCTGCAAATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPLRWSWVETTLSPFPFVRSFIP*ICCKSS Trigger: GCTGGATTTGCAGCAGATCAAGGGGATGAAGGACCG...CACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTGAATGAGACCATCTCCTaGGGCAAAGCATGGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SPLRWSWVETTLSPFPFVNETIS*GKAWVL Trigger: CAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATT...CACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CAA 90 bp | AGACCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCGTGAGTTGTCTGTGGTaGGCAGGCCGTGTGAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: RPHWTKSTQVELGGDYPVVSCLW*AGRVKV Trigger: GACTTTCACACGGCCTGCCAACCACAGACAACTCAC...GACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026560.14 |
||
| CDS-3UTR CAA 90 bp | TCAGACCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGCGGTCCTTCATCCCCTaGATCTGCTGCAAATCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDHTGQSPLRWSWVETTLRSFIP*ICCKSS Trigger: GCTGGATTTGCAGCAGATCAAGGGGATGAAGGACCG...CAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS GCA 90 bp | TCTCATCACCTCGTCTATGCTGCCTCTCACCAGCCCCACCGAGAGTaGCTTCATCACCAGCAACTCCACCTTGTTGACAGTGATTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SHHLVYAASHQPHRE*LHHQQLHLVDSDFG Trigger: GCCAAAATCACTGTCAACAAGGTGGAGTTGCTGGTGATGAAGGCACTCTCGGTGGGGCTGGTGAGAGGCAGCATAGACGAGGTGATGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165539.2 |
||
| CDS CCA 90 bp | AGTGCCTTCATCACCAGCAACTCCACCTCCATAAGGCACAACAGCTaGATCTTCCTCAGAAGCTGGGCTTCGTTGGCTGCTAAGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAFITSNSTSIRHNS*IFLRSWASLAAKSG Trigger: GCCTGACTTAGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGTGCCTTATGGAGGTGGAGTTGCTGGTGATGAAGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163610.9 |
||
| CDS-3UTR CAA 90 bp | GAGCCTGGTGTTCCACCAGCATCTCCATGCTCTTCACATCAGTGCACCAAAGCTGTGAGTTGTCTGTGGTaGGCAGGCCGTGTGAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EPGVPPASPCSSHQCTKAVSCLW*AGRVKV Trigger: GACTTTCACACGGCCTGCCAACCACAGACAACTCAC...AGCTTTGGTGCACTGATGTGAAGAGCATGGAGATGCTGGTGGAACACCAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTAAACTCCATCCCAAGTGAATACAGATCTCTGCTGATGGTTTCGGGGGCCAGAAGCTGGGCTTCGTaGGCTGCTAAGTCAGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ILNSIPSEYRSLLMVSGARSWAS*AAKSGC Trigger: GCAGCCTGACTTAGCAGCCAACGAAGCCCAGCTTCT...GGCCCCCGAAACCATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTTAGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 ENSMUST00000163610.9 |
||
| CDS-3UTR CAA 90 bp | GAGTTGTCTGTGGTTGGCAGGCCGTGTGAAAGTCATCTCCATAAGGCACAACAGAATGAGACCATCTCCTaGGGCAAAGCATGGGTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELSVVGRPCESHLHKAQQNETIS*GKAWVL Trigger: CAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATT...CTGTTGTGCCTTATGGAGATGACTTTCACACGGCCTGCCAACCACAGACAACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
||
| CDS-3UTR CAA 90 bp | CTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCATTCCATTTTAGAGCTCCGATaGCCGTCTTACACAAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: LDKVHSGGAGWRLPCPHSILELR*PSYTRS Trigger: TGATCTTGTGTAAGACGGCAATCGGAGCTCTAAAAT...GGAATGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
||
| CDS-3UTR CAA 90 bp | CACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCCCCAACGCGTGGTTTCCGATaGTTTGATAGTATTTACTGG | + |
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Preference number: 5 (lower is better) Translates to: HTGQSPLRWSWVETTLSPTRGFR*FDSIYW Trigger: CCAGTAAATACTATCAAACAATCGGAAACCACGCGT...TGGGGACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| CDS-3UTR CAA 90 bp | AGACCACACTGGACAAAGTCCACTCAGGTGGAGCTGGGTGGAGACTACCCTGTCATTTTAGAGCTCCGATaGCCGTCTTACACAAGATCA | + |
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Preference number: 5 (lower is better) Translates to: RPHWTKSTQVELGGDYPVILELR*PSYTRS Trigger: TGATCTTGTGTAAGACGGCAATCGGAGCTCTAAAAT...GACAGGGTAGTCTCCACCCAGCTCCACCTGAGTGGACTTTGTCCAGTGTGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| CDS CCA 90 bp | GACAGAGGGTTTACCCTTAATGAGACCATCTCCTTGGGCAAAGCATaGGTCCTGCACAAAATCAAGCACCTCAAGTGTCAGCTGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: DRGFTLNETISLGKA*VLHKIKHLKCQLMP Trigger: TGGCATCAGCTGACACTTGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATTAAGGGTAAACCCTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| CDS-3UTR CAA 90 bp | CAGCGACAGTTCTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCTTCTTCAAAAGTGAGTaGTCTGTGGTTGGCAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: QRQFSAFIARTVPTPSRIFFKSE*SVVGRP Trigger: CGGCCTGCCAACCACAGACAACTCACTTTTGAAGAA...GATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAGAACTGTCGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026560.14 |
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| CDS-3UTR CAA 90 bp | ATCCTAAACTCCATCCCAAGTGAATACAGATCTCTGCTGATGGTTTCGGGGGCCTTCTTCAAAAGTGAGTaGTCTGTGGTTGGCAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: ILNSIPSEYRSLLMVSGAFFKSE*SVVGRP Trigger: CGGCCTGCCAACCACAGACAACTCACTTTTGAAGAA...GGCCCCCGAAACCATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTTAGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 |
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| CDS-3UTR CAA 90 bp | CTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATAATGAGACCATCTCCTaGGGCAAAGCATGGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: LCFYSKNSSHSEQDPKLHNETIS*GKAWVL Trigger: CAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATT...ATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| CDS-3UTR CAA 90 bp | CTAGGTGAGGATGTCCTGAGCCTGGTGTTCCACCAGCATCTCCATGCTCTTCACTTGTTGACAGTGATTTaGGCACTTTTGGCAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: LGEDVLSLVFHQHLHALHLLTVI*ALLAIS Trigger: AGAAATTGCCAAAAGTGCCAAAATCACTGTCAACAA...GTGAAGAGCATGGAGATGCTGGTGGAACACCAGGCTCAGGACATCCTCACCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130462.8 |
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| CDS-3UTR CAA 90 bp | CTCTGCTTTTATAGCAAGAACAGTTCCCACTCCGAGCAGGATCCTAAACTCCATGTCACACCAGGGAGATaGTTGAGCATCTCTTCAACA | + |
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Preference number: 5 (lower is better) Translates to: LCFYSKNSSHSEQDPKLHVTPGR*LSISST Trigger: TGTTGAAGAGATGCTCAACAATCTCCCTGGTGTGAC...ATGGAGTTTAGGATCCTGCTCGGAGTGGGAACTGTTCTTGCTATAAAAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 |
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| CDS CCA 90 bp | GAAGTTTTCATAAAGCTTAATGAGACCATCTCCTTGGGCAAAGCATaGGTCCTGCACAAAATCAAGCACCTCAAGTGTCAGCTGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: EVFIKLNETISLGKA*VLHKIKHLKCQLMP Trigger: TGGCATCAGCTGACACTTGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATTAAGCTTTATGAAAACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 ENSMUST00000164681.8 |
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| CDS-3UTR CAA 90 bp | ATCCTAAACTCCATCCCAAGTGAATACAGATCTCTGCTGATGGTTTCGGGGGCCTTGTTGACAGTGATTTaGGCACTTTTGGCAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: ILNSIPSEYRSLLMVSGALLTVI*ALLAIS Trigger: AGAAATTGCCAAAAGTGCCAAAATCACTGTCAACAA...GGCCCCCGAAACCATCAGCAGAGATCTGTATTCACTTGGGATGGAGTTTAGGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026560.14 ENSMUST00000130462.8 |
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| CDS CCA 72 bp | CCCACCGAGAGTGCCTTCATCACCAGCAACTCCACCTaGCAGGTCCTTGATATCCACACAGCCCAGAAACCG | + |
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Preference number: 6 (lower is better) Translates to: PTESAFITSNST*QVLDIHTAQKP Trigger: CGGTTTCTGGGCTGTGTGGATATCAAGGACCTGCCAGGTGGAGTTGCTGGTGATGAAGGCACTCTCGGTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164681.8 |
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| CDS GCA 72 bp | GCTGGGTGGAGACTACCCTGTCCCCATTCCCATTCGTaGCCTTTCTCATCACCTCGTCTATGCTGCCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AGWRLPCPHSHS*PFSSPRLCCLS Trigger: TGAGAGGCAGCATAGACGAGGTGATGAGAAAGGGCACGAATGGGAATGGGGACAGGGTAGTCTCCACCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165539.2 |
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| CDS CCA 72 bp | ATCACCAGCAACTCCACCTCCATAAGGCACAACAGCTaGATCTTCCTCAGAAGCTGGGCTTCGTTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: ITSNSTSIRHNS*IFLRSWASLAA Trigger: AGCAGCCAACGAAGCCCAGCTTCTGAGGAAGATCCAGCTGTTGTGCCTTATGGAGGTGGAGTTGCTGGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163610.9 |
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| CDS TCA 72 bp | GGGTCCTGCACAAAATCAAGCACCTCAAGTGTCAGCTaGTGCCACAACTTCTTCGTGTACAGCTCTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: GSCTKSSTSSVS*CHNFFVYSSSK Trigger: TTTGGAAGAGCTGTACACGAAGAAGTTGTGGCATCAGCTGACACTTGAGGTGCTTGATTTTGTGCAGGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 ENSMUST00000164681.8 ENSMUST00000166889.8 |
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| CDS CAA 90 bp | ATTTCTACCAGGGACAGAGGGTTTACCCTTAATGAGACCATCTCCTaGGGCAAAGCATGGGTCCTGCACAAAATCAAGCACCTCAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: ISTRDRGFTLNETIS*GKAWVLHKIKHLKC Trigger: ACACTTGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATTAAGGGTAAACCCTCTGTCCCTGGTAGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| CDS CCA 72 bp | TTTACCCTTAATGAGACCATCTCCTTGGGCAAAGCATaGGTCCTGCACAAAATCAAGCACCTCAAGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: FTLNETISLGKA*VLHKIKHLKCQ Trigger: CTGACACTTGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATTAAGGGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166889.8 |
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| CDS CCA 72 bp | ATAAAGCTTAATGAGACCATCTCCTTGGGCAAAGCATaGGTCCTGCACAAAATCAAGCACCTCAAGTGTCAG | + |
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Preference number: 6 (lower is better) Translates to: IKLNETISLGKA*VLHKIKHLKCQ Trigger: CTGACACTTGAGGTGCTTGATTTTGTGCAGGACCCATGCTTTGCCCAAGGAGATGGTCTCATTAAGCTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026560.14 ENSMUST00000163610.9 ENSMUST00000164681.8 |
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